HMMER3/f [3.1b2 | February 2015] NAME secE_bact ACC TIGR00964.1 DESC JCVI: preprotein translocase subunit SecE LENG 57 ALPH amino RF no MM no CONS yes CS no MAP yes DATE Fri Nov 2 17:52:58 2018 NSEQ 32 EFFN 8.074219 CKSUM 3659303715 GA 27.55 27.55 TC 27.55 27.55 NC 25.65 25.65 STATS LOCAL MSV -8.4992 0.71900 STATS LOCAL VITERBI -8.6216 0.71900 STATS LOCAL FORWARD -4.3433 0.71900 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.67399 4.80042 3.41186 3.03687 2.46951 3.29709 4.33932 2.31964 2.71209 2.20171 3.63850 3.68203 3.78226 3.43196 3.20452 2.83473 2.80170 2.16656 3.75922 3.59726 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.00000 * 1 2.28098 4.75597 5.19499 4.58821 2.19560 4.51512 4.84171 1.71253 2.94270 1.95045 2.76334 4.63409 3.82179 4.55623 3.50495 2.54530 3.17264 2.37754 5.37568 4.19656 1 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 2 2.53398 4.80495 4.91318 4.32153 1.78294 3.25300 4.78037 2.56611 2.05279 2.48392 3.49477 4.48959 4.83905 4.38966 2.88498 3.18197 2.88542 2.09482 5.41886 3.09219 2 f - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 3 2.27613 5.77589 3.52017 2.34246 5.11940 3.34649 4.23102 4.60388 1.53192 2.80551 4.81713 2.10504 4.43753 3.32800 2.46856 2.72741 2.62108 4.16573 6.20938 4.79991 3 k - - - 2.68627 4.42234 2.77528 2.73132 3.46363 2.40522 3.72503 3.29363 2.67750 2.69364 4.24699 2.90356 2.73748 3.17993 2.89810 2.37871 2.77528 2.98527 4.58486 3.61512 0.11197 2.25941 6.49217 0.11854 2.19116 0.48576 0.95510 4 2.59012 6.26099 6.41071 6.20265 0.51779 5.91432 4.83343 4.81572 5.97461 2.67897 5.39715 5.60646 6.19473 5.73247 5.81526 5.28953 5.36658 4.71542 3.29097 1.82460 5 F - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 5 2.72777 4.75282 5.33645 4.72198 1.32872 4.54716 4.87635 1.74809 4.50781 1.94881 3.33788 4.70738 4.90956 4.63829 2.54099 3.85853 3.61020 2.99708 3.45907 3.44926 6 f - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 6 2.30034 5.76522 3.52282 2.68186 3.51569 3.01798 4.23217 4.58627 1.54250 4.06800 4.80742 3.12183 3.63765 2.53460 2.09461 2.95255 2.98216 2.98762 6.20142 3.57206 7 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 7 2.91472 5.78408 1.91424 1.73888 5.12668 2.00330 4.23809 4.61152 2.97559 2.91402 3.81299 3.19842 4.44321 2.24442 3.46877 2.50395 3.50895 4.17346 6.21802 4.80754 8 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 8 2.08777 3.22749 5.33314 4.71967 2.33759 4.54843 4.88444 2.09329 4.50763 2.61888 3.87255 4.70841 4.91193 4.64134 4.51995 2.09965 2.67645 1.46027 5.38056 4.20409 9 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 9 3.31175 5.15594 3.14568 3.45506 2.42586 3.14446 4.48021 2.16553 1.85365 2.49349 4.25209 3.19148 4.62665 3.74597 2.35607 3.15406 3.54336 2.30956 5.72038 3.55274 10 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 10 1.60590 5.75329 2.06341 2.61626 3.96459 4.04714 4.23537 4.56555 1.97494 2.48247 4.79687 3.51894 4.44036 2.94513 3.04852 2.71971 2.83004 3.59672 6.19264 4.78846 11 a - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 11 4.54464 7.40474 2.81791 0.28781 6.63345 4.51845 5.21621 6.26740 4.44745 5.66886 6.62107 3.95213 5.23751 2.44707 5.19909 4.33202 4.87532 5.76185 7.80446 6.13094 12 E - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 12 2.60195 4.91527 5.54177 4.93326 3.32523 4.75953 5.10369 1.36215 4.72530 1.45779 1.93614 4.92537 5.10354 4.84528 4.73124 4.07773 2.75081 2.43149 5.56651 4.40199 13 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 13 2.63238 5.77540 3.52654 2.52380 2.87413 4.04839 3.14009 4.60081 1.46408 4.07876 4.81703 2.92984 4.44152 3.00062 1.64979 2.95635 3.50484 4.16477 6.20877 3.67915 14 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 14 4.55624 6.60828 5.24098 4.25613 6.26155 5.07859 4.78977 5.48745 0.62096 2.69356 5.67658 2.51496 5.37494 3.91046 1.59386 4.51661 4.63700 5.18099 6.71189 5.66187 15 K - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 15 4.43878 5.60562 6.63624 6.22561 5.19425 6.17910 7.21430 1.10729 6.22905 3.56210 4.86477 6.38620 6.38931 6.56091 6.45019 5.66551 2.43219 0.68510 7.46395 6.18020 16 V - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 16 3.32685 5.02173 4.24714 2.59541 3.38128 4.31720 4.57476 2.40808 3.62817 3.23109 4.12644 4.07228 4.69582 3.38113 3.18945 2.02527 1.71205 1.56701 5.60730 4.37776 17 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 17 5.24267 6.48179 6.45681 6.37219 2.83684 5.81909 5.00996 5.10263 6.07316 4.26946 5.65069 5.73459 6.26090 5.91688 5.93879 5.31173 3.60907 5.06415 0.20797 3.36006 18 W - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 18 2.85443 5.49221 5.80199 5.75122 5.98522 4.35931 6.38178 4.81544 5.69164 4.96044 5.91839 5.20877 0.32484 5.83622 5.71018 3.86771 4.19845 2.10850 7.47608 6.39584 19 P - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 19 2.95667 5.72496 3.56422 3.01211 5.07227 3.50888 4.26860 4.54274 2.00677 3.36955 4.79752 2.55364 3.73949 3.37363 3.49940 1.32858 1.76035 4.12385 6.19652 4.80162 20 s - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 20 2.72573 5.71117 3.70544 3.13424 5.01405 2.98126 4.32684 4.45061 1.49659 2.63112 4.77100 3.65895 4.54937 3.44741 1.32504 2.87511 3.59940 4.08079 6.16088 3.22519 21 r - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 21 2.95088 5.78365 3.16720 2.06637 5.13031 4.04357 2.80777 4.61680 1.43521 3.36865 4.82405 2.80825 4.43704 2.33210 2.09503 3.23243 3.11623 4.17517 6.21501 4.80395 22 k - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 22 3.58284 6.13915 2.22894 1.22302 5.47161 4.19389 4.49490 4.97309 2.79394 4.43856 5.19527 3.65102 4.66576 1.24743 3.82164 2.93727 3.31217 4.52531 6.56683 5.12331 23 e - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 23 2.34036 4.77754 5.35926 4.74763 3.87455 4.58143 4.91985 2.29350 4.53802 1.16450 2.75792 4.74008 4.94286 4.67275 4.55267 3.09316 2.36953 1.81412 5.41482 4.23859 24 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 24 3.35920 4.76470 5.13832 4.53488 2.28828 3.53547 3.73491 1.86282 2.32900 1.82496 3.35606 4.60664 4.87272 4.52421 3.06753 3.81000 2.55024 1.95083 5.38341 4.20276 25 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 25 2.90061 5.70160 3.55400 2.69510 2.62794 3.40738 4.24957 2.69086 2.35073 3.99293 4.75093 3.08629 4.45148 2.56490 1.88844 2.57955 2.12602 4.07468 6.15419 3.32764 26 r - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 26 2.51464 5.69271 2.98607 2.44465 5.00182 3.35572 4.25202 3.34365 2.29992 3.98254 3.69088 3.10610 4.45334 3.36131 3.48848 2.01067 2.29596 4.06388 4.06524 1.87777 27 y - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 27 3.36297 4.75726 5.20638 4.59945 2.22140 3.55223 4.84630 2.90618 4.41040 2.59346 3.87576 4.64098 4.88380 4.56422 4.46122 2.52431 1.02364 2.14521 5.37713 3.39071 28 t - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 28 3.01406 4.78375 5.02380 3.65425 2.47867 3.17279 4.80605 1.81208 2.31678 1.56647 3.90064 4.54867 4.85634 3.46677 4.38365 3.36199 3.12361 2.19861 3.97325 4.21612 29 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 29 1.92272 4.79140 5.30837 4.70087 3.89097 4.58331 4.91880 1.70617 4.50408 2.11228 2.81896 4.72213 4.94450 2.46347 4.53961 3.89353 2.68074 1.60481 5.43111 4.25334 30 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 30 4.50854 5.66403 6.71207 6.32930 5.21258 6.27881 7.43755 2.05417 6.35224 3.52817 4.87167 6.50823 6.47460 6.69554 6.59185 5.80122 4.78489 0.23791 7.58749 6.29513 31 V - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 31 4.69900 5.87253 6.77559 6.24464 2.29358 6.24502 6.68606 0.84938 6.15215 1.24046 4.14182 6.42615 6.28273 6.06763 6.12772 5.67132 4.92216 2.09961 6.66459 5.66620 32 i - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 32 1.90804 4.74671 5.26089 3.37605 2.54942 3.28015 4.85426 2.20441 4.44903 2.13835 3.86531 4.66506 4.88843 4.59244 4.48009 2.72558 3.04977 1.46811 3.79765 4.19005 33 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 33 3.36876 4.74360 5.32910 4.71426 1.44743 4.53847 4.87196 2.56138 4.50013 2.64076 2.56336 4.69971 4.90176 4.63186 4.50962 2.41993 2.18229 1.77573 5.36604 3.22263 34 f - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 34 3.48456 3.55645 5.45246 4.84738 3.96840 4.68226 5.03450 2.29561 4.64306 2.38661 3.39955 4.84294 5.03933 4.78227 4.66146 3.07900 1.52692 1.06133 5.52548 4.34672 35 v - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 35 2.01469 4.74529 5.33747 4.72251 2.23141 3.28674 4.87716 1.75171 4.50747 1.60878 3.29236 4.70562 4.90574 4.63847 4.51535 3.11618 3.60385 1.95386 5.36986 4.19399 36 l - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 36 2.63116 4.84210 5.44864 4.84070 1.40350 2.44170 5.01568 1.67821 4.63298 1.94080 3.93898 4.83225 5.02521 4.76529 4.64589 3.98541 3.71263 2.15369 5.49988 4.32468 37 f - - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00465 5.76983 6.49217 0.61958 0.77255 0.48576 0.95510 37 2.73375 4.74113 5.33830 4.72254 1.72396 4.53805 4.87200 2.43868 4.50594 1.46037 2.09089 4.70276 4.90126 4.63548 4.51157 2.84854 3.21751 2.44351 5.36305 3.34878 38 l - 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