>truA.TIGR00071
RKIALKIAYDGSNYHGWQRQPNKRTVQGELEKALEAIGK-----------KKITIMSAGRTDKGVHAMGQVISFDTPKE-IPD----------NKLNAK--LNA-LLPPDIRVKA--LAPVNDNFHARFSASKR--------------------------------------------------------------------------------------HYRYILY-NHR-----------HYY-SPLDLEKMRAAAKQLLGKHDFSNFSKAK----SKSRSPIRTISDIKVSE-------SGEYIIFDIIGNSFLWHMVRKIVGALVLVGRGKLPPEWVAKLLDAKKRNLAPTTAPANGLYL
>gi|149242461|pdb|2NQP|A
YKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVAN-----------EPITVFCAGRTDAGVHGTGQVVHFETTAL-RKD----------AAWTLG--VNA-NLPGDIAVRW--VKTVPDDFHARFSATAR--------------------------------------------------------------------------------------RYRYIIY-NHRLRPAVLSKGVTHFY-EPLDAERMHRAAQCLLGENDFTSFRAVQ----CQSRTPWRNVMHINVTR-------HGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYL
>gi|123176|sp|P07649.1|TRUA_ECOLI
YKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVAN-----------EPITVFCAGRTDAGVHGTGQVVHFETTAL-RKD----------AAWTLG--VNA-NLPGDIAVRW--VKTVPDDFHARFSATAR--------------------------------------------------------------------------------------RYRYIIY-NHRLRPAVLSKGVTHFY-EPLDAERMHRAAQCLLGENDFTSFRAVQ----CQSRTPWRNVMHINVTR-------HGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYL
>gi|1174804|sp|P45291.1|TRUA_HAEIN
MKIALGIEYNGQNYYGWQRQEKVRSVQEELEKALSHIAN-----------EKIEIFCAGRTDSGVSGTGQVVHFETNAV-RPE----------KAWAFG--TNA-HLPDDIAVSW--AKQVDDEFHARFSATAR--------------------------------------------------------------------------------------RYRYILY-CNKLRSAILAGGITHCH-LDLDAEKMHQAGQCLLGEQDFSSFRAAQ----CQSHTPWRNVHHLNVSR-------IGKYIIVDIQANAFVHHMVRNIVGSLIEVGTGNQPIEWMQWLLEQKNRQLAAPTAKPDGLYL
>gi|3915173|sp|P73295.1|TRUA_SYNY3
QRVALVMQYLGTHFHGWQRQPNFSSIQEEVELAIAKVVG-----------QPVTLHGAGRTDAGVHAAAQVAHFDDPVGQIPP----------HRWSKI--LNG-HLPQDIIVRG--SAAVDSHWHARFSALWR--------------------------------------------------------------------------------------RYRYSIY-TDQWPNLFADQFSWHYYRFPLQEKTIQAAMEPLLGKHHLAAFHRAG----SARRHSWVEVQGVECYR-------RGPMVYLEIQANGFLYGMVRLLVGMLAEVGSGQRSLTDFNDIWVNQRRDLVKYAAPAKGLCL
>gi|239938721|sp|P70973.2|TRUA_BACSU
MRLKCTISYDGHLFNGYQVQPGKRTVQDELEKALAVLHKS---------KDRIPVVSSGRTDSGVHAAGQVIHFDTPLS-IPA----------ERWPYA--LNA-LLPDDIAVKQ--AEIADDGFHARFSAVKK--------------------------------------------------------------------------------------EYRYFVY-TEKHPDVFKRHYAYHFS-YRLNVQDMREAAKHLIGTHDFTSFCAAK----TEVQDKVRTIYELDWTE-------TADGLQMRITGSGFLYNMVRIIAGTLLDAGIGKISPDEVKSMLEAKDREAAGRTAPGHGLYL
>gi|3915171|sp|P70830.2|TRUA_BORBU
KKILAEIAYDGSIYHGFQIQPTKPTVQGEIEKALMKINK-----------KKVKIHSSGRTDKGVHAKKQIITFDIKIN-IQL----------NNLKKA--LNAILLKNSIKILK--LRYVKNSFHPRFSAQKR--------------------------------------------------------------------------------------KYSYCIL-NSDNYYPW-EGYQAHYVNKKLSISNLNQMAKTLIGKHDFTTFSCIK----DKSKSKFRHIYFAKFKK-------RGKYIIFEIIGSSFLWKMVRSIIGTMLDIEIKNESISTFETILKSKNRNLARTTAPANALFL
>gi|3915163|sp|O28544.1|TRUA_ARCFU
MKFAFKIAYFGDNFHGSQFQPDQRTVEGEVINALRRLGV-----------ENPRLRSAGRTDAGVHAYGQVISFYSEDK-IFP----------RMLNAE--L-----PEDITAWA--WAKVSEDFDPRRAKS-R--------------------------------------------------------------------------------------VYTYVMY-GS-----------------DYDISAMRKAVKELIGVHDFSNFTKKF----GEGESCVREIISADIRA-------DREFIIFEIEGNAFTWNMVRCIVTAIMEIGKQHRSIEWFRDLLNPEKHKERVEPAPPYGLIL
>gi|2499078|sp|P56144.1|TRUA_HELPY
RCFKATIAYDGAYFLGYAKQPNKLGVQDKIEDALNALGI-----------KSVV-IAAGRTDKGVHANNQVLSFHAPKH-WNA----------AKLFYY--LAP-KLAPHIVLKK--LE--EKNFHARFDAQKR--------------------------------------------------------------------------------------AYRYLLT-KNLKTPFLAPYIACGDY-GSLDA--LNTALKQFTGKHDFSMFKKEGGATTNPKRTIFNAFAYKTFII-------GHECVVFKIIGDAFLRSSVRLIIQACVQYSLEKITLAEIQAQIHNL-KATIRTPIMANGLYL
>gi|2499079|sp|Q50291.1|TRUA_MYCPN
Y--LAIVAYNGAPFRGWAKQPGYHTVQGQIEQNLALIYQ-----------TPINIYGSGRTDKGVHAINQTFHVDLPDK-LPL----------KQLIAK--LNQ-LNYPDIFVKA--LVPVAPRFHARFAVKTKVYEYLIN------------------------------------------------------------------------TRAFNPAQYHTVWQYNH-----------------PLDLAQLEADTTLFLGRKDFWSFST------ASQKDTQRTISKIIVQQD------HTGTVKLTFFGNGFLRNQIRMMVASLVALNNRTLMRETVQQLFDQPQKGGCKVKAPACGLYL
>gi|1351308|sp|P47428.1|TRUA_MYCGE
Y--LGIVSYDGSYFKGWAIQPNLATIQGLLEQSFSLIIG-----------RKIKVIGSGRTDKGVHAINQTFHVDINGE-INL----------NLLIRK--INQ-LIKPHCIVKT--LVLVNDSFHARFQVKTKVYEYLIN------------------------------------------------------------------------CGNLNPLQFNYVWQLNQ-----------------QLDLEKLKADATLFLGKKNFLSFSS------SIHTDSIRTISKITIQKE------TNQLVRLTFFGSGFLRSQVRMIVACLVNLNTNKMALETVAKLFEHPKKGSCVVKAPSCGLYL
>gi|399356|sp|P31115.1|PUS3_YEAST
RFIALRFAYLGWNYNGLAVQKEYTPLPTVEGTILEAMNKCKLVPSMVLQDYKF--SRCGRTDKGVSAMNQVISLEVRSN-LTDEEQRDPTNDSREIPYVHVLNQ-LLPDDIRISAVCLRP-PPNFDARFSCVHR--------------------------------------------------------------------------------------HYKYIFN-GK-----------------NLNIEKMSKAASYFVGERDFRNFCKLDGS-KQITNFKRTIISSKILPL-------SETFYCFDLVGSAFLWHQVRCMMAILFLVGQSLEVPEIVLRLTDIEKTPQRPVYEMANDIPL
>gi|3915162|sp|O26928.1|TRUA_METTH
RKIALKVAYIGTNYHGFQRQPDVPTVEGKLLEALEGAGIIED-----PKRARF--QIAGRTDRGVHALGNFVSFFTEED-IHV----------NQ------IND-LLPRDIRVLA--WASVMYPFKVRYPLE-R--------------------------------------------------------------------------------------HYRYILHREE-----------------SMDTYSMAEAAAHFRGTHDFSNFSR------RSDRDPVRRINDVRISE-------VGDSIIIDVYGESFLWQMVRKMVRALLMVSEGELAPDDMAGLLDTDRRVFLEPMPPENLILM
>gi|3915177|sp|Q59069.1|TRUA_METJA
Y--ILKIAYDGR-Y-SFQQQPHKQTVCDILLDALEETGFL---------AKKKVIYSGGRTDKGVSALGNFVVVELKKE-PIL----------SYINAK--LKDKGIWVLGYREID---------EIPKVKY-R--------------------------------------------------------------------------------------HYRYILP-NI-----------------GYDVDAIKEGAKKMIGTHSFHNLSKRDR---TKEKSPIRTIYDIKISE-------NEFYLTVDIIGESFLWNMVRKIVGALDLVGRGKKPVEWIDKLLDENHREGVPTFPPEGLILV
>gi|1322568|emb|CAA96766.1|
----MLLGYCGSGYYGMQYNPPHKTIEGEILTKLFDVGAISEENSLAPKKNSF--MAAARTDKGVHAMLNLLSLKITL--RED----------TV--AK--LNA-ALPPEIRVWG--IQPVNKKFNARSACDSRWYQYLIPEFILIGPPRSSLLHRNVGGSYREDGSQEV-------------------------WDTFLEQTRGRFSGDELCRLQDTAQKLSESDPLVQDYVGLLS-GTLSGYCLSPSKLDAFEAAMQEYVGTHNFHNFTTGKL---WGDPSAQRHIKKVVVSQA------SPGWICVRIHGQSFMLHQIRRMVALAVLAARCQLPPNIVRNYFNAGPRKYIPRAPAQGLLLE
>gi|3122655|sp|Q12211.1|PUS1_YEAST
RKVAVMVGYCGTGYHGMQYNPPNPTIESALFKAFVEAGAISKDNSNDLKKNGF--MRAARTDKGVHAGGNLISLKMIIE-DPD----------IKQ--K--INE-KLPEGIRVWD--IERVNKAFDCRKMCSSRWYEYLLPTYSLIGPKPGSILYRDIEESKTELPGVLDEDLESKEFWEEFKKDANEKFSTEEIEAILAYVPPARDEFDINEELYQKVKKYKQLENAHRR-----------RYRISAAKLAKFRASTSQYLGAHNFHNFTLGKD---FKEPSAIRFMKDIKVSDPFVIGDAQTEWISIKIHGQSFMLHQIRKMVSMATLITRCGCPVERISQAYGQQKIN-IPKAPALGLLLE