>mfd.B000046
GLPGSARALLLAALA-PLLVVTADGQEAQRLADELRFFLPDLPVLLFPDWETLPYDRFSPHQDIVSERLATLYRLGIVVTPVNALLQRLPPPSFLAGYTLSLKVGDELDLDALRAQLVEAGYERVDQVEEPGEFAVRGGILDIFPPGSELPYRIEFFGDEIESIRTFDPETQRSLEKVEEVRLLPAREFPLDEERPAGIEYYLPLFFTLFDYLPEDTLAELRRFLE-GGRVLLAAESEGRRERLLELLAEL-VGPLEEGFELPDLAVITESELFGQNDALIKDLAELKPGDYVVHVDHGIGRYLGLETLEV-GAEREYLVLEYAGGDKLYVPVDQLDLISRYVGSEGEAPPLHKLGGGAWQKAKAKAKKKVRDIAAELLKLYAKRAARKGFAFSPDTEWYREFEASFPYEETPDQLRAIEAVKADMESPKPMDRLVCGDVGFGKTEVAMRAAFKAVMDGKQVAVLVPTTLLAQQHYETFKERFAGFPVRVEVLSRFRSAKEQKAILEGLAEGKVDIVIGTHRLLSKDVKFKDLGLLIIDEEQRFGVRHKEKLKALRANVDVLTLTATPIPRTLNMALSGIRDLSIIATPPEDRLPVKTFVREYDPLVIREAILRELLRGGQVFYVHNRVETIEKVAARLRELVPEARIAVAHGQMRERELERVMLDFYHGRYDVLVCTTIIETGIDIPNANTIIIERADKFGLAQLYQLRGRVGRSHHQAYAYLLYPPDKVLTEDAEKRLEAIQSFTELGAGFKLAMHDLEIRGAGNLLGEEQSGHIAEVGFDLYMEMLEEAVAALK-GWETEIDLGVPALIPEDYIPDVRLRLELYKRIASAETEEELDELQEELIDRFGPLPEEVKNLLEIARLKLLARKLGIEKIDAGPKGIVIEFSP
>EPSI281_P643725223 YP_002607879 NAMH_1487 transcription-repair coupling factor [Nautilia profundicola Am-H]
----------VYEYL-KTNIITSAKKEADLTGEVYKYL--NIPYVVFPDFRATLGDDLRSFRNEIFELNNALFKYSFFISPYTTILKKLPHKRYYQSIEIEF--GDDINLNELKEKLILWGYEHVDIVSEKGEVSFRGDIFDIWPINLEKPVRVSLFDTEVESIRIFEETSQKSIEEIESFTIIPAIAALEKEENSSEFSAFYKDFYLGFWYLERE--------VA---KNEVLLKEAGIFEEVK--LRAI---HCPDKY----IVSLNPPEFE--KKTNLV-LDEIKKGDFVVHEAHGIGKFNGLKKVEILGKVGEYAEVLYANDDKLLLPVENLNLIEKYIAPGGVIPTLDKLGKGTFAKKREKIKEKILSMAADIIKLQAQRQLIEPIPLNFEG--VREFIAKAPFVHTPDQAKTINDILDDFKT-KIMDRLLSGDVGFGKTEVAMVASFVVANSGYQVAVIAPTTILVNQHFESFKERFKDTDIKIAKLDRFTSSKEKKEILEKVKTGEIDIIISTHAGL--NIEYKNLGLVIIDEEHKFGVKQKEKLKEISKNVHTLYMSATPIPRTLNMALSQVKSISTLETAPKGKQSTKTFVKEWNENLIKEVILRELRRGGQIFYIYNNIAYIEQKKKELQKILPDLRILVLHAKLTPAQIEKGLVDFIAGKYDLALTTTIVESGIHIPNVNTVIVENADKFGIADLHQIRGRVGRGKHEGYAYFLVKNKDELSEDAKKRLLALEENSFLGSGQVLAMRDLEIRGGGNILGAEQSGQIKGVGYSMYVKMLEDTLKELSG-DEVEVKLNINAYISDEVVKEDRLRLDLYKRLSMCKTLEDVYEIEKELVDRFGKLDKPTQNFIEKIKIKVLASQKGIKSISNYGENITFIYND
>EPSI281_P640823204 YP_001359339 SUN_2041 transcription-repair coupling factor [Sulfurovum sp. NBC37-1]
NIYEYLENVK-----EEKLLLCKDDKEALQIRDVAQLLG-FD-TFVLPDIRVNMGEDLRAYVEDLQLFFAQLSAYKILISPVRTVLLPFPKPEFFRNKVLEF--GDTVDLNELKDTLYQWGYHFTDIAASRGEVSFRGDIIDIFPIDAEKPYRISLFDDEIESIQHYDEATQKRFEELDSVEFTPAF-LALDKKDSLGLWHLEDLGQSALEQFPAVWAKLLEAH--KDKKITVIARNESIVRGSE--LST----VYQDGI----VNIMGDDRLILNVKKATIILDELKPGDYVVHENHGVGIFKGIEKRDVLGATSEFVVIFYQNEDSLLIPVSSLEVIDRYVAEGGALPVLDRLGKASFKKLKGKVREKLFAIASQIINLSAQRHLKKGIRMKIDREEHTLFMSKAGFLHTEDQERAINDMLDDMSSGRMMDRLLSADVGFGKTEVAMNGMFVAVRNGYQAMMIAPTTLLSSQHYKSLKERFYDYGFKVAKLDRFSTTKEKNAILKGLAEGTIDVVVGTHALL--KAKFKNLALVIIDEEHKFGVKQKEALKEMSIDVHLLSMSATPIPRSLNMALSEVKSFSEILTPPTERQGVRTFVKSYDDKVIKEAILREMRRGGQIFYVFNSIAGIDEKKKQLLEILPKLRVAVLHSKISAKETEDEMLKFEDGEYDVLLSTSIVESGIHMPHANTMIVEGADNFGIADLHQLRGRVGRGGREGYCYFMVTDKDRLTENAKKRLIALESHSDLGSGAVLAFHDLEIRGGGNIIGEAQSGHIKQIGYSLYLRMLEDAIKEL-SGHNIDMKLSIDAYLNEELIEEDRLRLELYRRLSLCETTGEVYEIEAEIADRFGKPDTITRQFIDVMVMKVLAKQQEISKVSSYGENVFIEFRE
>EPSI281_P640948795 YP_001489354 Abu_0410 transcription-repair coupling factor [Arcobacter butzleri RM4018]
NLKDEKRLKE------CQLLIVNDDRQAQIASDIVSYL--GFKPFLLADFRANFGDDLLSFSEELHEITKTLGDFKILISPIRTISYPLPKEKCFESFTINF--ADRLNLEELKSKLYNWGYYFVDIVTSEGEVSLRGDILDICPLGSDFGYRVSLFDDEVESIRKFDIEDQKSSEEIESFSINPAF-LALDEAFIKDIHSLGFWYLELGEYLPQKSSANVKEFISNDKKITIISGSEAKVKGYDLDLSDY---VFENYI----LNLVSDDEVILNKKKVKLVLDELQYNDFVVHEKYGIGQYKGIEPVTVMGAKRDFVIIQYQGEDKLLVPVENLDLIDRYVAD-GNSAVVDKLGKGSFAKLKEKVKDKLFAIANDIIKLAAARELVNGIKINTDKKVLEDFQKSAGFEYTKDQKRSIKEILDDLSSGRVMDRLLSGDVGFGKTEVAMNALLAVILDGYQTIFVCPTTLLATQHYHSIQKRLESFGIRVAKLDGKTTAKEKTSIKKGLENADIKLVIGTHSLL--DIKTSNLALVIIDEEHKFGVKQKEKLKQLREDVHIFSMSATPIPRTLNLALSKLKGMSSLLTPPSERLGVRTYVKEYSEKLIKEIILREKRRGGQLFYVHNNIASIEAKKKDIEAIVPNIKIDIIHSQIKPEQAEKIIEAFENKEFDILLATSIVESGIHLPNANSIIIDGADRFGIADLHQLRGRVGRSNKEGYCYYVVEDKKSITDDAVKRLVALESNSYLGSGTALAHQDLEIRGGGNIIGEAQSGHIKQIGYGLYLKMLEDTLATL-SGKTVDIKLAISAYISDEYISEDRVRLELYRRLSKASDIQEVYSIEEEMEDRFGKPDIVTKQFIELIIIKILALKLGIQTISSYEMNITFTKAD
>EPSI281_P640820749 YP_001356925 NIS_1461 transcription-repair coupling factor [Nitratiruptor sp. SB155-2]
RFYEYLRSSI------PQILVVADEKEAQEASSAAKVL--GIDHYILPDFRAQYGDDLRVFKEELDELLAVLNDYKMLIAPVHTIAKPMPVQRYFARKRVEF--GDEFELESLKELLYQWGYTFVDIVESKGEASFRGDIVDIFAPNFDKPIRLSFFDTQIESIRYFDPQTQKSIEELEAFTLYPA--FLIQDELLEGKEAIRSGSFELYSYEGLIPKKQNKKI-----KVLVKSPEFARRSSIKEL---F---IYTDAI----LNIEGPDEVILSAKPPSIVIDELQPGSYVVHEQHGIGIFKGLKAIEILGAKRDFVELEYAGGDKLLVPVENLDVLSRYIADSGSVAVVDKLGSQSFAKLKAKVKERLFEIAADIVKIAAQRELTPGKKI-ITPPDITLFQSHAGFEYTEDQKRAIDTILQRLSSGKVMDMLLSGDVGFGKTEVAMNAIYAIVKNGYQAAVVVPTTLLSAQHYESLVKRLEPFNISVTKIDRFVTAKEKKERLQALKEGTFDVVVGTHALF--GAEFKNLGLVVIDEEHKFGVKQKEKLKAFSKDVHLLSMSATPIPRSLNMALSQLKDLSEIRTPPQNRKPVRTYVKEYQDKLVKEVILRELRRGGQVFYIYNSIAGIEEKKEDLQQLLPGKKILVLHSKIAAATTEKELLRFAQGEYDILLSTSIVESGIHMPNVNTIIVEGADRFGIADLHQLRGRVGRGGKEGFCYYLVEDKQKLTEEAKKRLIALESNSYLGSGAALAYYDLEIRGGGNIIGAQQSGHIKNIGYSLYLQMLEETITKL-TGPQVELKLSVNAYISSEVVREDRLKLELYRRLAQVKEPEEIAQIQEEIEDRFGKLDSYTKNFLDLIHIKLLALEHGIKKISNYNQNITFDFG-
>EPSI281_P643718165 YP_002575612 Cla_1039 transcription-repair coupling factor [Campylobacter lari RM2100]
-----MQAKLYEYLL-AELIVCENDKEADELAQVCLFL--NLKTFVLPDFRAEFGSDLRSFSKELFEICKVLNAYKILISPIKTILQKLPGKKHLKN--IILKRNSLLALEKFKEEILHSGYEFVDIVQDKGEISIRGDIIDIFAINEEQPFRILLFSDEIESIRYFDIHTQKSINELSKIEICPFLNAFNQEEIINDVNSLGFWCIDFCDYS---DLTFHKDK-----KITILIKNEALFKALN--LQEL---KISQER----INLIAQDELV--IRKASLVIDELRVGDFVVHEDYGIAKFLGLEII-IAGAKKEFVALGYLNNDKLLLPVENLYMIDKYIGASGGVPLLDKLGKGSFLKIKERLKEKLFAIASNIVSLAAARALIKAKELKISQELQDEFINKAGFFYTKDQSQVCQEITQDLKSSQVMDRLLSGDVGFGKTEIAMNAIFTCVKSGYTALFFVPTTLLSAQHFKTLKKRFDPFNIEVFKLDRFTSAKEKKQILAFLKENKPCVVVGTHSLL--GVECENLGLVVIDEEHKFGVKQKEKLKELSKNSHILSMSATPIPRSLNQALSSLKSYSILQTPPEDRLDVRTFVRESNDALIKEAISRELRRAGQIFYIHNHIASIDGCKKYLLDLFPNLKILILHSKIDAKTTEEQMLKFENKEYDLLLCTSIVESGIDLANANTIIVENSDRFGMADLHQLRGRVGRSFQQGYCYFLIEDKEKITKDSLKRLTSLESNSYLGSGSVLAYHDLEIRGGGNLLGVDQSGHIEQIGYSLYLKMLEDEINKLSK-KKIDLKLNINAFLNSEYISEDRLRLELYRRLSKCMSVNEVYEIESEMNDRFGKPDIFTKQFLDLIIIKILASKH-YKLVSNYEQNICFVKDD
>EPSI281_P640861706 YP_001397800 JJD26997_0638 transcription-repair coupling factor [Campylobacter jejuni doylei 269.97]
----------------CELLLCKDEKQADLLAQVSRFK--GLKTFVLPDFRAQFGDDLRAFSKELFDLCKILNAY-ILISPLNTVLKKLPSKKHLQNYYI--DKKQNFDLKFFEDEISRLGYEFVDIVQDKGEISIRADIIDIFCINEENPIRILLFGEEIESIRYFDLQSQKSINELEHFEICPFLKYF-DKELIHDINSLGFWCIDFFDYLEFDFLDFFEFH--KNKKITLLAKNEALFKTLE--LEDFIKSDLRLNLISPEELIISQKEKQ--RKKASLIIDELKNGDYIVHEDYGVGKFLGLEMIVISGAKKEFVAIEYQNSDKLLLPVENLYLIDKYLGVSGSIPSLDKLGKTSFIKLKEKLKTKLLAIASEIVIMAAKRSLVQAKKITVDLNRQTDFIASAGFIYTSDQDKACHEILQDFQNGKVMDRLLSGDVGFGKTEVAMNAIYPVVKSGFCAFLFAPTTLLSHQHYKILKKRFDPFGIKVFKLDRFTSSAEKKQVLQNLKENKACVVVGTHALLS--VECENLALVIIDEEHKFGVKQKEKLKEITQNSHILSMSATPIPRSLNQALSSIKSYSVLQTPPEDRMDVRTFVKENDDVLLKEAIARELRRGGQIFYIHNHIASIEQCKKHLLELFSTLRILILHSKIDAKVQEEEMLKFENKEYDLLLSTSIVESGIDLPNANTIIVEKSDRFGMADLHQLRGRVGRSDKQGYCYFLIEDKNAITKDALKRLVSLESNSFLGAGSVLAYHDLEIRGGGNLLGVDQSGHIEQIGYSLYLKMLEDELNALS--NKLDLKLNVNAFLNSDLISEDRLRLELYRRLSKCEQVHEVYEIEGEIEDRFGKLDVYTKQFLSLIIIKILALNK-FKSISNYEQNIQFTALN
>EPSI281_P640941968 YP_001482602 C8J_1026 transcription-repair coupling factor [Campylobacter jejuni jejuni 81116]
----------------CELLLCKDEKQADLLAQVSRFKG-LK-TFVLPDFRAQFGDDLRAFSKELFDLCKILNAYKILISPLNTVLKKLPSKKHLQNYHI--DKKQNFNLKCFEDEISRLGYEFVDIVQDKGEISIRADIIDIFCINEENPIRILLFGEEIESIRYFDLQSQKSINELEHFEICPFLKYF-DKELIHDINSLGFWCIDFFDYLELDFLEFHKNK-----KITLLAKNEALFKALE--LEDFVKSDLR-------LNLISPEELI--RKKASLIIDELKNGDYIVHEDYGVGKFLGLEMIVISGAKKEFVAIEYQNSDKLLLPVENLYLIDKYLGVSGSIPSLDKLGKTSFIKLKEKLKTKLLAIASEIVIMAAKRSLVQAKKITVDLSRQADFITSAGFIYTSDQEKACHEILQDFQSGKVMDRLLSGDVGFGKTEVAMNAIYPVVKSGFCAFLFAPTTLLSHQHYKTLKKRFDPFDIKVFKLDRFTSSAEKKQVLQNLKENKACVVVGTHALLS--VECENLALVIIDEEHKFGVKQKEKLKEITQNSHILSMSATPIPRSLNQALSSIKSYSVLQTPPEDRMDVRTFVKENDDALLKEAIARELRRGGQIFYIHNHIASIEQCKKHLLELFSTLRILILHSKIDAKVQEEEMLKFENKEYDLLLSTSIVESGIDLPNANTIIVEKSDRFGMADLHQLRGRVGRSDKQGYCYFLIEDKNAITKDALKRLVSLESNSFLGAGSVLAYHDLEIRGGGNLLGVDQSGHIEQIGYSLYLKMLEDELNALSKENKLDLKLNVNAFLNSELISEDRLRLELYRRLSKCEQVHEVYEIEGEIEDRFGKLDIYTKQFLSLIIIKILALN-KFKSISNYEQN--IQFT-
>EPSI281_P640870174 YP_001406057 CHAB381_0469 transcription-repair coupling factor [Campylobacter hominis ATCC BAA-381]
----------------KEILITENDKEAQISDQVLKFIG-FE-TFVLPDFRALHGEDLRSYYDELISISTVLSAFKIIISPIRTILNKLPAKSQLKFLNLKF--ADKLEISNFKDEILRIGYLTNDIVQSKGEVSFRGEIIDIFALNYEKPIRILLNDDEIESIRFFDESTQKSETEIESIEIAPFLANLSKDELIKDLSSLGFWFIGFIDYLQNFSFEFHKDA-----QITLIARNSALIDELNISISP----ILREDLV---VNLISNDEIILNVRKSSLAVDELQIGDFVVHENYGVAKFAGLELIEVLGSKSEFVVLEYFGGDKLLLPVQNLNLIDRYIA--SGVATLDKLGKTGFAKIKEKVREKLFAIASKIIQTAAARELVRGIVIENNTPEYAKFLSSAGFEYTKDQQNAVNAIFTDLKSGKVMDRLISGDVGFGKTEVAMNAIFACIKSGYSALFFVPTTLLSAQHYATLKERLTPFKIQVFRLDRFTGAKEKAEISKKIKDKIPIVIIGTHALL--NMEVANLGLIIIDEEHKFGVKQKEKLKSKSAASHVLSMSATPIPRSLNMALSSLKSYSVLSTPPLDRLDVRTFVKERDEKIIKEAIMREIRRGGQVFFVHNHIATIETCRKNLQKIVPNLKILILHSQIDAKTTENEILKFEAGEYEILLCTSIVESGIHMPNVNTIIVENANKFGIADLHQLRGRVGRSAKQGFCYFMVEDKTALNEDAIKRLIALESNSFLGSGSVLAYHDLEIRGGGNLIGEAQSGHIEAIGYSLYIKMLEDEINKLM-NKDVELKIAVNAFLNSDFIREDRLRLDLYRRLSKAETVSQVYEIFGEIEDRFGKADIYTKQFIDLMIIKILANSLNIKSITSAEQNILITYAN
>EPSI281_P639746123 YP_891912 CFF8240_0737 transcription-repair coupling factor [Campylobacter fetus fetus 82-40]
----------FNKNI-YDILVTNDDKEAREAYDSASYA--GLTCFVLPDFRAIQGDDLRAFNAELLEISKVLTEFKLLISPIRTLLNKLPTSSNLKTKTISY--ADTLNLTEFKEEMLGFGYNFVDIVEGRGEIRISGEIIDIFSVSEDKPIRILLDIDTVCSIRYFDLDTQKSDNELTSVIITPFLASLNSDELIKDINSFGFWVIGFSDYFESFTV------SK---KIQILSSNESSFNALN--LENL---VISNLI----LNIASKDELILSVKKASLVIDELKTGDFVVHSDYGIGKFLGLELITVLGSKKEFVVIAYQNNDKLLLPVEHLNMIDRYIAGSGAVVSVDRLGKASFAKIKEKVREKLFVIANKIIALAAKRELIEGIRLNADSQ-YAKFKSSAGFIYTDDQEKAVNDIQNHLKSGRVMDMLLSGDVGFGKTEVAMNAIFLCVKSGYQALFFVPTTLLSSQHFKSLKERFDKFNIDVRRLDRFTSTKEKSNIIKNLNDAKPMVVIGTHSLLS--LKAANLGLIIIDEEHKFGVKQKEKLKEISEHSHILSMSATPIPRSLNMALSKVKSYSTLLTPPLDRMDVRTFVKEWDEKLIKEVILREIRRGGQIFYVHNLISDMPSMERELKALIPNLKVLTLHSKIDAKTTEDEMMKFANKEYDLLLCTSIIESGIHLPNANTIIIDDANKFGIADLHQLRGRVGRSNKQGYCYFLVGDKNELSSEAVKRLIALESNSFLGSGALLAYHDLEIRGGGNLLGEAQSGHIEAIGYTLYLKMLEDEINLLLN-TQIDIKLSVNAFLNTDLINEDRIRLELYRRLSKCQNVSEVYELGAEIEDRFGKLDAYTKQFLDIIVIKILACEQGFKSVSNYEQNISLTKID
>EPSI281_P640929761 YP_001467043 CCC13826_0078 transcription-repair coupling factor [Campylobacter concisus 13826]
----------------PQILICEDDKEAALCADAASFA--GFSAFKLPDFRAKKGDDLRSFNEELFEISSVLSKY-IIVSPFSTLLNPLPTQKNLESSTIKL--KDNLNLNEFADLLIRFGYECVDIVESVGEFSIRGEVVDIYGVNMDDPVRILLFGDEVESIRNYNTATQISNNELSEAEIVPFIANLSKDELVSDLNSLGFWAISFSDYLKEFSK------LNKSKSITVLSRNEGLFKGYE--LDGLEISPLVVNLTSSDKIVVSLNKFEKKVKRSSLVVDELKVNDYVVHEDYGIGRFLGLEKIKVLGATKEFVVIAYQNDDKLLLPVEHLNLIDRYIAQNGSMAVLDRLGKANFAKIKEKVREKLFAIASKIVAMAAKRELIAGKILQKEDISYLNFVQDAGFSYTSDQQKAVNDIKDELKSGKVMDRLLSGDVGFGKTEVAMNAIFTCIKSGFSAFFFVPTTLLSSQHYKTLSQRFSKFGIKVFRLDRFSSAKEKSNLQKALKENEPIVCVGTHALLS--VKAENLGLIVVDEEHKFGVKQKEQLKEISQHSHILSMSATPIPRSLNMALSKIKTYSILATPPSSRLDVRTSVREWDEKVIKEAIMRELRRGGQTFYIHNHIADIEQTANELRKILPKLRILILHSKINAKVAEDEMMKFERGEYDLLLCTSIVESGIHLPNANTIIVENANKFGMADLHQLRGRVGRSDKQAYCYFLVEDKDAISKDALKRLVALEGNSFLGAGSVLAYHDLEIRGGGNIIGEAQSGHIEAIGYSLYLKMLEDEINKLL-NDKIDLKLGVSAFLNQEFIREDRLRLEIYRRLSKCKEVSEVYEIQSELEDRFGKIDTFTKQFLDLIIIKILALKAGIKTISNSEQNILITKND
>EPSI281_P640872702 YP_001408519 CCV52592_0714 transcription-repair coupling factor [Campylobacter curvus 525.92]
----------------AQILICEDDKEASLCADAAEFA--GFKAFRLPDFRAHFGDDLRSFSEELFEISSVLSAY-LIISPFHTLLNRLPKAKHLQSRTINF--GQKLNLNELADELMRFGYDVVDIVEGAGEFSLRGEIIDIYGVNMNEPVRILLFDDEVESIRNYSTATQISSTELESVEITPFIANLSKAELVNDLNSLGFWAIDFGDYLAEFCK------LNQNKKISVLARNESLFSQFD--LRRFVQSPLVLNLTSNEQIIVSLNKFEKKVKRASLVVDELKINDYVVHEDYGIGRFLGLEKITVLGATKEFVVIAYQNDDKLLLPVEHLNLIDRYIAQNGSVAVLDRLGKASFAKIKEKVREKLFVIASKIVAMAAKRELIAGKVIEKNDLEYLKFVQNAGFDYTTDQQKAVEEIMSDLKSTRVMDRLLSGDVGFGKTEVAMNAIFACVKSGFSALFFVPTTLLSAQHYKSLKERFADFGVKIFRLDRFTSAKEKSAMLKVLKDNEPCVCVGTHALL--GVKANNVGLIVIDEEHKFGVKQKEQLKEVSANSHILSMSATPIPRSLNMALSKIKSYSVLATAPSSRLDVRTSVREWDEKVVKEALMREMRRGGQAFYIHNHIADIEQTAQNLRKILPKIRILVLHSKINAKTTEDEMMKFERGEYDVLLCTSIVESGIHLPNANTIIIENANKFGMADLHQLRGRVGRSDKQAYCYFLVEDKDALGGDALKRLLALESNSFLGSGSLLAYHDLEIRGGGNIVGEAQSGHIEAIGYSLYLKMLEDEINKLL-NDKIDLKLSINAFLNQDFIREDRLRLEIYRRLSKYESVSAVYEIASELEDRFGKMDVYTKQFLDLIAIKILALKCGYKAISNSEQNIVLTRKN
>EPSI281_P637793996 YP_394078 Tmden_1566 Transcription-repair coupling factor [Thiomicrospira denitrificans ATCC 33889]
----------TTKKS-LEILLCEDAKEAQELKSVALFFG-KE-VIVFPDFRATHGDDLRVYKEELHQLFSSLRNYPLIISPLKTLLFEMPQESLLKSRVIEF--GEKIEFRAFQQQMLLWGYNFVDMVQVEGEISFRGDIIDIYPPSSKMPLRISLFDNEIEQIKYFELESQRTQEELESFELTPAF-FSLDESASLGLWHL-----SGVNFLESKNVKVHKAK-----KTTIIASNEAVIKQAG--LFDLYAP------YI--LNIMGKDELVLNRRKSSILLDDLKVGDYVVHEDYGVGIFEGIEQTEILGGVKDFIVIKYIGDDKILLPVENLDAIDRYIASGGSVPVLDKLGKGSFGKLKESVKKRLLEIAGQIVNTAAARELITAPKINVDEDELRAFQKLSGFLYTDDQSQSINEIITQMSSGHIMDRLLSGDVGFGKTEVAMNTIFAAYKSGFQSALIVPTTLLSAQHYRSLHERFDALGIKCSKLDRFVSAKDKTNIIKALSSGDLDVVVGTHTLF--DLDFKKLGVVIIDEEHKFGVKQKEKIKELYHNVHLLSMSATPIPRSLNQALSSIKTMSQLLTPPSQRQPVRTFVKAYEEKLIKEVLLREIRRGGQIFYVHNSIDHMPIKLGELKALLPSLRVVMLHSKISATDTEKELLKFEAGEYDLMLATSIIESGIHMPRVNTIIVDGADRFGMADLHQLRGRVGRSNVEGFAYFIVNDKETLTDEAKKRLLALESNSFLGSGSVLAYHDLEIRGGGNLVGDAQSGHIKNIGYSLYLRLLEDAIKLLSN-AKVDIKLTISAFVSDEVVKEDRLRIDIYRRLSSCIDSVEIYEIQEEVIDRFGALDAPTKQFFELMVIKVLSLSKGIKSVSNYGQNITITYMD
>EPSI281_P637431484 NP_859989 HH0458 transcription-repair coupling factor [Helicobacter hepaticus ATCC 51449]
----------QGNFP-YELLLTKDAKQSQDAYELIKLFD-YQKAFVLPELRIHFGDDLSSFREEFLGVLSVLRTFKILISPISSVLYPLPKEQILQTFNLSF--GQRYDLAVLKKHIVEYGYECVEVVELEGEVSFRGDIVDIFMPYSESPYRIAFFDDEVESIRIFDTHTQMSNTEVKEICIAPAL-FSLNPQWFLGENHFLPLHFSLLT--PQA--NAHSNR-----EITLIAHNDIKLKA----FDII---KYSDAV----VNIITPNELILNHKKPTLKLNEIAQGEYVVHSEYGIGIFEGIKQTQIVGVVRDFIEISYQGEDKLLLPVENLNMIERYVADSGQIPMLDGLGKGSFAKLKQKVKTKLLEIAHNIIDLAAKRNLLQGIKIDTQNPSLLSFQNACGFTLTHDQIRSIEEIYTDLSSGKVMDRLLSGDVGFGKTEVAMNAIYAVCLSGFQAAMIVPTTLLCAQHYHSLQMRLESFGIRVARCDRFLSTAEKKRLFLGLKNNEVDVVVGTHALL--GAEFAKLGLIVVDEEHKFGVKQKERIKALCAHTHLLSMSATPIPRTLNMALSHIKSLSSLHTPPVDRIPVRTFIKNAKDSLLKEIILRELRRGGQVFYIHNNIATIQKKAQEIQSLLPQLKIAILHSKVESTQTENIMLDFANNVYNVLLCTSIIESGIHLPNANTIVVASADRFGIADLHQLRGRVGRGNKEGFCYFLVEDMEVITPEAKKRLMALEKNSYLGSGENLAYYDLEIRGGGNLLGEAQSGHIKNIGYGLYLRLLEECINYLSGGVQCDLKINLNAYLNPQLIASDKLRLELYRRLSLCEEISEVNDIESEIFDRFGAPDTMSKAFLELICVKVLANKLRLKQIMHYGQNITITYMD
>EPSI281_P637456463 NP_907419 WS1239 TRANSCRIPTION-REPAIR COUPLING FACTOR [Wolinella succinogenes DSM 1740]
SLYHALKNPF------PYQILITQDDKESYLASEVARFR-GFETILFPDFRAQKGDDLRSYKEELLALLGALRKWLLLIAPLRSLLHPLPKEELLQSFHLGF--GDNLDIGELKERFYRFGYEFVEIIELPGEVSFRGDIIDVFPPQESSPVRLSLFDTQIESLRYFDLETQMCEEELDRIEITPAL-FALDEAFSKDLMSLGLWYLDKGEVLPRRVPSLHANK-----EITIIARNEALFRAFD--LKE----QIGDFC----VNLLTPKEVILNKRRPTFAIDELRVGDYVVHKDYGIGIFKGIIQERVLGALRDFILLAYQGEDRLLLPVENLDYIDRYVADSGSIPSVDRLGKGSFAKLKEKIRTKLLEIASEIVALAAKRELIEGRAIRTDFPEIEIFQHSSGFVYTSDQEKSIREIFSDLEGGKVMDRLLSGDVGFGKTEVAMNAILATVMSGYQAALVAPTTLLAHQHFQSLKKRFEGRGIKMARLDRFLSSKERTSLLNALKEGEVDVVVGTHAILS--AVFKRLALIIVDEEHKFGVKQKERIKAIAQDVHMLSMSATPIPRTLNMALSSIKGMSTLLTPPSEKLPVRTFVKEYQEALLKEIVHREIRRGGQIFYIHNNIATIERRQKELLELMPNLKIAILHSQIPEKETEEIMLAFEEGRYHLLLSTSIIESGIHLPNANTIIIDSSDRFGIADLHQLRGRVGRGSKEGFCYFLVEEKESLTPEAKKRLLALESNSFLGSGSVLAYHDLEIRGGGNLLGEAQSGHIKGIGYALYLKMLEEAIHSLSS-EDVDLKLSINAFLSPELIESDRLRLELYRRLSRCESTQEVNEIEVEIHDRFGSPDLYTKQFLELILIKVLASLQGIKTITNYNQNITFFYRD
>EPSI281_P638057634 YP_664141 Hac_0299 transcription-repair coupling factor [Helicobacter acinonychis Sheeba]
------KGFD------CQILACKDFKESELAKEVISYVKPHIKAILFPEFRAKKNDDLRSFFEEFLQLLGALREFAIIIAPISALLHPLPKKELLESFKITL--LEKYDLKELKDKLFYYGYEILDLVEVEGEASFRGDIVDIYAPNSKA-YRLSFFDTECESIKEFDPLTQMSLEDLLEIEITPTL-FSLDEQFSKDLASFGLWFLKAQDLL---SVSFIALH--SHHKITLLAPNKTILDNVLGTLDTCVIAPFVLNFKTPDKIFISLNSFE--HKKSKLALNELNAGEWVVHDDYGVGVFSQLIQHSVLGSKRDFLEIAYLGEDKLLLPVENLHLIARYVAQSDSVPTKDRLGKGSFLKLKAKVRTKLLEIASKIIELAAERNLILGKKMDTHLAELEIFKTHAGFEYTNDQEKAIAEISKDLGSHRVMDRLLSGDVGFGKTEVAMHAIFCAFLNGFQSALVVPTTLLAHQHFETLRARFENFGVKVARLDRYVS--EKNKLLKAVESGLIDVLVGTHAIL--GTKFKNLGLMVVDEEHKFGVKQKEALKELSKSVHFLSMSATPIPRTLNMALSQIKGISSLKTPPTDRKPSRTFLKEKNDELLKEIIHRELRRNGQIFYIHNHIASISKVKKELENLIPKLKIAILHSQINANESEEIMLEFAKGNYQVLLCTSIVESGIHLPNANTIIIDNAQNFGLADLHQLRGRVGRGKKEGFCYFLIEDQKSLNDQALKRLLALEKNSYLGSGESIAYHDLEIRGGGNLLGQDQSGHIKNIGYSLYTRMLEDAIYELSGGKSVEIQLSVSAFLNPELIASDSLRLDLYRRLSLCENVDEVGQIHEEIEDRFGKIDALSEQFLQIITLKILANELGILKLSNFNQNITIAYSD
>EPSI281_P642637218 YP_001911030 HPSH_08085 transcription-repair coupling factor [Helicobacter pylori Shi470]
------KGFD------YQILACKDFKESELAKEVISYFKPNVKAILFPEFRAKKNDDLRSFFEEFLQLLGGLREFAIIIAPISALLHPLPKKELLESFKITL--LEKYNLKDLKDKLFYYGYEILDLVEVEGEASFRGDIVDIYAPNSKA-YRLSFFDTECESIKEFDPTTQMSFEDLLEIEIPPTL-FSLNEQTSFGLWFLGEKANLLRAYK-----SFIALH--SNCKITLLAPNKTILDNAISALEKCVIAPFVLNFKTPDGIFISLNSFE--RQKSKLALNELNAGEWVVHDDYGVGVFSQLVQHSVLGSKRDFLEIAYFGEDKLLLPVENLHLIARYVAQSDSVPIKDRLGKGSFLKLKAKVKTKLLEIASKIIELAAERNLILGKKMDTHLAELEVFKSHAGFEYTSDQEKAIAEISKDLSSKRVMDRLLSGDVGFGKTEVAMHAIFCMFLNGFQSALVVPTTLLAHQHFETLRARFENFGVKVARLDRYAS--EKNKLLKAVELGLIDVLVGTHAIL--GAKFKNLGLVVVDEEHKFGVKQKEALKELSKSVHFLSMSATPIPRTLNMALSQIKGISSLKIPPTDRKPSRTFLKEKNDELLKEIIHRELRRNGQIFYIHNHIASISKVKTKLEELIPKLKIAILHSQINANESEEIMLEFAKGNYQVLLCTSIVESGIHLPNANTIIIDNAQNFGLADLHQLRGRVGRGKKEGFCYFLIEDQKSLNEQALKRLLALEKNSYLGSGESIAYHDLEIRGGGNLLGQDQSGHIKNIGYALYTRMLEDAIYELSGGKSVEIQLSVSAFLNPELIASDSLRLDLYRRLSFCENTDEVGQIHEEIEDRFGKIDDLSTQFLQIITLKILANQLDIIKLSNFNQNITITYSG
>EPSI281_P637019299 NP_208332 HP1541 transcription-repair coupling factor (trcF) [Helicobacter pylori 26695]
------KGFD------YQILACKDFKESELAKEVISYFKPNTKAILFPEFRAKKNDDLRSFFEEFLQLLGEFYQA-IIIAPISALLHPLPKKELLESFKITL--LEKYNLKDLKDKLFYYGYEILDLVEVEGEASFRGDIVDIYAPNSKA-YRLSFFDTECESIKEFDPITQMSLEDLLEIEIPPTL-FSLDESWFLGEKQDLLIVYSIIS--PRA--ALHSNH-----KITLLAPNKTILDNAISALDACVIAPFVLNFKTPDGIFISLNSFE--RQKSKLALNELNPGEWVVHDDYGVGVFSQLVQHSVLGSKRDFLEIAYLGEDKLLLPVENLHLIARYVAQSDSVPAKDRLGKGSFLKLKAKVRTKLLEIASKIIELAAERNLILGKKMDVHLAELEVFKSHAGFEYTSDQEKAIAEISKDLSSHRVMDRLLSGDVGFGKTEVAMHAIFCAFLNGFQSALVVPTTLLAHQHFETLRARFENFGVKVARLDRYAS--EKNKLLKAVELGQVDALIGTHAIL--GAKFKNLGLVVVDEEHKFGVKQKEALKELSKSVHFLSMSATPIPRTLNMALSQIKGISSLKTPPTDRKPSRTFLKEKNDELLKEIIYRELRRNGQIFYIHNHIASILKVKTKLEDLIPKLKIAILHSQINANESEEIMLEFAKGNYQVLLCTSIVESGIHLPNANTIIIDNAQNFGLADLHQLRGRVGRGKKEGFCYFLIEDQKSLNEQALKRLLALEKNSYLGSGESVAYHDLEIRGGGNLLGQDQSGHIKNIGYALYTRMLEDAIYELSGGKSVEIQLGVSAFLNPELIASDSLRLDLYRRLSLCENTDEVGQIHEEIEDRFGKIDDLSAQFLQIITLKILANQLGIIKLSNFNQNITITYSD
>EPSI281_P643383864 YP_002267087 HPG27_1479 transcription-repair coupling factor [Helicobacter pylori G27]
------KGFD------YQILACKDFKESELAKEVISYFKPNIKAVLFPEFRAKKNDDLRSFFEEFLQLLGGLREFTIIIAPISALLHPLPKKELLESFKITL--LEKYNLKDLKDKLFYYGYEILDLVEVEGEASFRGDIVDIYAPNSKA-YRLSFFDTECESIKELDPTTQMSLEDLLEIEIPPTL-FSLDEPTSFGLWFLGEKANLLHAYK-----ALHSHH-----KITLLAPNKTILDNAISVLEKCVIAPFVLNFKTPDGIFISLNSFE--RQKSKLALNELNPGEWVVHDDYGVGVFSQLVQHSVLGSKRDFLEIAYLGEDKLLLPVENLHLIARYVAQSDSVPIKDRLGKGSFLKLKAKVRTKLLEIASKIIELAAERNLILGKKMDVHLAELEIFKSHAGFEYTSDQEKAIAEISKDLSSKRVMDRLLSGDVGFGKTEVAMHAIFCAFLNGFQSALVVPTTLLAHQHFETLRARFENFGVKVARLDRYAS--EKNKLLKAVELGLVDVLVGTHAIL--GTKFKNLGLVVVDEEHKFGVKQKEALKELSKSVHFLSMSATPIPRTLNMALSQIKGISSLKTPPTDRKPSRTFLKEKNDELLKEIIYRELRRNGQIFYIHNHIASISKVKTKLEELIPKLKIAILHSQINAYESEEIMLEFAKGNYQVLLCTSIVESGIHLPNANTIIIDNAQNFGLADLHQLRGRVGRGKKEGFCYFLIEDQKSLNEQALKRLLALEKNSYLGSGESIAYHDLEIRGGGNLLGQDQSGHIKNIGYALYTRMLEDAIYELSGGKSVEIQLGVSAFLNPELIASDSLRLDLYRRLSLCENTDEVGQIHEEIEDRFGKIDNLSAQFLQIITLKILANQLGIIKLSNFNQNITITYSD
>THERMO40_P641302600 YP_001568434 Pmob_1408 DEAD/DEAH box helicase domain protein [Petrotoga mobilis SJ95]
KVNK------------QKILVLPDGY-LQDFDDE------EE-VFIYPDFDIFPFENLDISPNIKAKRMKTLHALVTVLTTFSSLIRYTLPKNEFVSKKI--KVGDTFDLDHNVPY--HLGYNLSEEVTSPGEYSKRGFVRDFFIPIYEQPVRIELWDEVIDRISFFDSYSQRSIENLKEVEIIPGSEIMKFDHTLDQFNTLPGIFYTIFSYLNEDDIKEKENY---------EMCDTELKRKIYKMFSGL---EILNKIKYEEVKLTLEKIYF--EYIPLLDWEDLNDGDLVVHEDYGIGIYHGVNKVETLG-LREFVTLEYSDNSRVYVPVGRLDKLSKYIGD-PESVKISSLNSKSWKNTKQKVKEEIKQKIEELQKIYALRENQRGIQLFGDPELEEKFKETFPYVETPDQEKSIKEVMRDLESERPMDRLLSGDSGFGKTEVAMRAAFRTVVSNYQVLLLAPTTILAKQHYENFKQRMDSFGIKIALVTRHKTQKEKKDLFESIGKGQVDIVIGTHALLSDLLQVKNLGLVIVDEEQRFGVLQKEKFKKLSDGVNFLMMSATPIPRTLYMSISGLRDISTISTPPVGRLPIQTFIGKYSDKLVRTAILREKSRGGQVIYIHNRVQELNELHKKLRTLIPEIKIAMVHGGTPKKEFIKSINDLYDGNIDLLLSTTIIENGIDIPNVNTLILDDPERYGISQLYQIKGRVGRSNRRAFVYFLF--KKEVTPQTKKRLEAIKQYNEPGSGLKLALRDLEIRGYGDILGIEQKGHINAIGYHLYHEMLNKILFEY-GKTYTEIKIKGSLVIPESYISNSIERMRIYRRISVAKTVDDVEDIRSEIRDKYGKFPEEVERLFQYALIKVKANMEGIKEIEIGDTYISFKFEN
>THERMO40_P640875526 YP_001411248 Fnod_1758 DEAD/DEAH box helicase domain protein [Fervidobacterium nodosum Rt17-B1]
----------MILLS-NEILIVPSEKETN---------I-EG-YYYIPDYDVLPYENLRPSWYVRSRRIYALYLAGKLIATLRALLHYVMKPSEFKKYIYHLKPGDE--LSSPEELFAKLGYERVFNVREGGTFSIRGEIIDYLGP-DNMPVRIELYGNLIEEIRRFDLKTQRSQEKLESALLLPAREFVV---KLEPIDQLTGKYCTFLDYN-----DEYKKF-----GIISYEDILSKAQEIE--LKQ----PITQ------EKLLIEEEYI--PSAPVLSEDELQVGDLVVHKRYGIARFTEIKKVETSG-AKEFLVLNFA-DSTLYVPIERIDLIDKYIG--DDVVKLDSLKKGTWSKKVSKAKRNIETIVRDMLLIHYIRNNTTGVALPGDSELESEFAKTFPYIETEDQLKAIQDVFEDLVSGKPMDRLLVGDAGYGKTEVAIRAIFRAIVSGKQAALLAPTTVLARQHYENIAERFKPFGIRVALLDRFVTKKEREEILRDVKNGKIDLLIGTHSILN-NVVFADLGLVVIDEEQKFGVEQKEKFKKLRVNVHVLSMSATPIPRTLHMALSELKEFSEIKTPPFGRKEVQVHIGPFDDRIVRIAILREINRGGQVIYVHNRVNTIYDVYERLKELLPEVSIVIGHGQQSKSELKRAIDMFFHGKADVLLCTTIVENGVDVPNANTLIVDDAHRYGLAQLYQLRGRVGRSDKISFAYFFHPK--HVNDKVLERLYAIKSYVGPGSGLKIAMRDMEIRGIGAVFGLEQHGYINDIGLNYYLELLDETIKESKG-VDTELEIPGSIIIPEAYIYDPFERMRFYRRIASATSIDELMDIKLELEDRFGKIPNSVENLLKYGMLRVLLWKMGVKKATIGDSTIVVEFKN
>THERMO40_P643446348 YP_002333998 THA_150 transcription-repair coupling factor [Thermosipho africanus TCF52B]
----------------NKILIVPSEKDCNI----------EG-YFYIPSYDVFPYENLENSWFVRSKRIYSLYLALKGVATLYSITRFIMPPSIFKKYVIELKVGDI--FESPEELFSKLGYERVYNVTEGGQFSIRGDIIDFYGPN-EVPTRIELFDNLIEDIRHFDPSTQKSIRKIEKALILPAREYIE---KYNG---------TFLDYN-----EIIKIAKE------IDLNSDIQKSK----IDE----KKEEEI--NSLPVLSEDEF--------------NIGDIVVHKEYGIAKFVGTTKI-TKDLEREFLILQFN-DSKLFVPTDRLDLVQKYIGT-NENVTLDNLKKNNWSKRVKKAKSQIEKIVKEILRINALRKNTKGISLPGDSELEKEFAKTFPHIETQDQLKAIQEVSEDLSSEKNMDRLLAGDAGYGKTEVAMRAAFKAAISGKQVAVLVPTTVLARQHYENFKKRFEPFGINVELYDSSLTKKQKDEVKQKIETGITDVVIGTHGLL-KSIKFSDLGLLIIDEEQKFGVQQKEALKKLRINVNILSMSATPIPRTLHMALSGIKDMSVIKTPPFGRKNIQVYVNTYDEKIIRQAIMREINRGGQVLYVHNRVNDIEDVAKKLKEIVPEVSIDIANGQMPKKRMEKVIEEFYHGKLDVLVATSIIENGVDIPNANTLIVDDAHRYGLAQLYQLRGRVGRSDKRAFAYFFHPS--KINKVAKERLKAIKEIMGPGSGFQIALKDMEIRGIGNILGLEQHGFINDIGFHYYFEILEEVLN--KEGIKTEIILKGSIIIPEEYIANPIERLRIYRRISSFENEQMIFDLIDELNDRFGKVPQSVINLLKYARMRIIASKLSINKIELYEDNIVVYTSK
>THERMO40_P640770124 YP_001307075 Tmel_1855 DEAD/DEAH box helicase domain protein [Thermosipho melanesiensis BI429]
----------------NKILILPNEKDCNI----------EG-YLYIPSYDVFPFEKINNSWFVRSQRIYALYLALKATATLYSITRYVMPPDILKKHIFELKIGDK--ITSPEVLFSNLGYERVFNVTDGGQFSTRGDIIDFLGPN-QIPTRIELFDNIIEDIRTFDIATQKSIKKLEYAIILPAKEYIE---KYKG---------TFLDYN-----KILEVS-----KEKILENTKKRKEKASDEINS--------------IPVISQEDF--------------QIGDYVVHKEYGIAKFSGITKITQNE--REFLILQFK-DSKLFVPTDRLDLVQKYIGA-SETVKLDNLRKSNWIRKVNKAKKEIQNTVKELLRLNALRKMTKGLPLPGDPELEKEFANTFPHIETEDQLKAIEEVSEDLSADKNMDRLIAGDAGYGKTEVAMRAAFKTVVSGKQVALLVPTTVLARQHFENFQKRFKKFGIKVELYDNSLTPKQKENVKENVKKGITDIVIGTHGIIAS-MKFSDLGLLIIDEEQKFGVHQKESFKKIRVNINILSMSATPIPRTLHMALSGIKDMSILKTPPIGRKNIQVFVSKFDERIARQAILREVNRGGQVLYVHNRVNTIKDVADNLKKIVPEVKIEIAHGQMSKRKMEKIIKEFYDGNLDVLVSTSIIENGIDIPNANTLIVDDSHRYGLSQLYQLRGRVGRSEKRAFAYFFHPS--KINKTAQERLKAIKEIMGPGSGLQIALKDMEIRGIGNILGLEQHGFINDIGLNYYLEILNEVLSNLE-GINTELIMKGSIVIPENYVSDPVERLRLYRRISSLSTEKEVDEILNELEDRFGTPPESVINLLKYTKLRILSSKMGISKVIFNENSIIL-YSK
>THERMO40_P641232014 YP_001470243 Tlet_0613 DEAD/DEAH box helicase domain protein [Thermotoga lettingae TMO]
----------LNLEK-PVLIVVPTEYEAQLLSQKLN-------AFYFPSHDVFPFEEVAVSFEVRCRRIEILWKLIVIVCTLHAISRKTFSPVQLRQAARILRKGEV--FHNPEETMLNLGYDRTYIVRTGGEFSVRGDVIDFFGPLYDNPVRVELFDQTIEAIRCFDASTQRSVK-VEEAFLLPVREYLCNEHGSNS---------TILDYSDFE--KRIEFF------------------------------PLEIDLNT--LKILPQTSQK--DQIPIFDEEELIEGEFVVHRDYGIGVYDGVK--KING-TREYFVLRYE-DSTVYVPVERIHKIHKYIG--DTRVRIDRIHSGNWKKRIERVKRNLREKVEELIRIYDTRQKISGLSLPGDPELEKRFAEFFPYAETDDQMTAIEEVLSDLANDKPMDRLLCGDAGYGKTEVALRAAFKCVVSGKQVAVLVPTTVLARQHYKIFTQRMSPFGIQVRLLDRSISTIMKKEILDGLFRGKIDVIIGTHALLQNNVRFSDLGLVIIDEEQSFGVEQKEKFKQLRTNVNVLSLSATPIPRTLHMAMTGMKDLSVINTPPIGRLPVITYVAKYSNQLVRGAVLREINRGGQVIYVHNRIHDIQDVYQNLQHIIPEAKIVLAHGKMGIRKLTEAVRSFYEHDSDVILCTSILESGIDIPNANTIIVDDSHRYGLAQLYQLRGRVGRSTKRAFAYFLH--DSEISEKALQRLQAIKQLTGSGSGFQLALRDMQIRGVGSVFGFEQHGNINDVGLNLYLEIMNQQLKGIKEEVDTEMEIPGELVIPPDYVESPLERMRIYRRFASCETVSEIDGMVEELHDRFGKLPNQALMLVELFKIRLLASSKHIRKIEYRDNILKLIYEK
>THERMO40_P643636386 YP_002534585 CTN_1043 Transcription-repair coupling factor [Thermotoga neapolitana DSM 4359]
----------------VEILLVPNEREIHL----------EG-YLFYPSRDNLPLEDVPLSPEVKKKRMEILWRLLKIVTTLKALTEKIFSPESLKERTIEVRRSAS--FYLSPERFVEMGYERTFTVQMPGEFSIRGGILDIFSPGYDFPVRIELFGEVVEDIRFFDVSTQRSFQKVDEVYILPFLDEYG----------------SLLDFV-KD--KELKDLLKEKYDLFF---DEGVLERVLKNVEK-SAGTVSSGI--EE------------RSLPLVDIDEIEEGELVVHKEHGIAIFEGMIRLKSLG-ERDYLKLKYE-DAVLYVPVEKIDRVHRYIGD-PSQVKLDRLNRGRWKRTLKKVREDIEKRVRELVELYLKREEVRGTLLPGDPELEEKFAETFPYIETPDQQKCIEEVLTDLSSEKPMDRLLCGDAGVGKTEVALRAAFRAVVSGKQVAVLVPTTVLARQHYENFKERLEPFGVRVELLDSSRTLRERKEILEGLKKGEIDVVIGTHALLNERVEFSDLGLVIIDEEQKFGVEQKEKFKKMRLSVNVLSLSATPIPRTLHMALSGMKDLSVINAPPPGRKPVHVYIAEYNEELVKGAVVREVNRGGQVIYVHNRVEELPEVLENLKRMFPELRIAMAHGKMSRRVMEKVVHEFYSGNIDVLLCTTIIENGVDIPNANTLIVDDAHRYGLAQLYQLRGRVGRSDRRAFAYFLYPK--GVPKSALERLRVLKAHTGPGSGLQIAMKDMEMRGIGDVLGLEQHGNIISIGLKLYNEILRETVTKVK--VQIEIEPPGRFFIPEDYISNPVERLRMYRRLASASEEGEIEEILEEMRDRFGEPPEEVKLLLDYFRIRIRASKLGIRRFD--------HFMV
>THERMO40_P637006743 NP_229249 TM1450 transcription-repair coupling factor, putative [Thermotoga maritima MSB8]
----------------MVEILLLPNERFSNIEG----------YIFYPSRDVLPLEDVVLSPEIKGKRIEILWRLLKIATTLKALTEKVFSPDFLRENSLMIARSTK--LTLSPEKLVEMGYELVFTVQNVGEFAIRGDIIDIYSPGNDFPVRIELFGDEIEEIRFFKVDTQRSFG-VDKTLILPFVDFYG----------------TLLDFLKTD--KEMRDL-------------------LKERYNDVILKNVEKGS----APLSTRVE----ESLPILDVDEIEEGGLVVHREHGIAIFEGIVRLK--GGERDYLKLKYE-DAILYVPIEKIDRVHKYIGD-PSQVKLDRMNRGKWKQTLKKVREDIEKKIKELVELYMKRQEAQGLSLPGDPELEEKFAESFPYIETPDQQQSIEEVLSDLASEKPMDRLLCGDAGVGKTEVALRAAFRAVASGKQVAVLVPTTVLARQHYENFKERMEPFGVKVELLDSSRTAREKKEIIEKLKKGEIDIIIGTHSLLNERIEFSDLGLVIIDEEQKFGVEQKERFKKLRLSVNVLTLSATPIPRTLHMALSGMKDFSVINSPPPGRKPVYVYVAEYSDDLVKGAVIREINRGGQVIYVHNRVEELPEVFEKLKRMFPELEIAVAHGKMSRKTMERIVHEFYRGNIDVLLCTTIIENGVDIPNANTLIVDDAQRYGLSQLYQLRGRVGRSDRRAFAYFLYPKGT--PRSALERLKVLKSYTGFGSGLQIALKDMELRGVGDVLGLEQHGNVVSVGLKLYNEILKETITRFK--VNVEIEPPGRFFIPEDYVQNPVERLRLYRRLASSLDEEDLEEILEEMKDRFGEPPEEVKLLVDYFRLRVRASKLGIKKIR---------FDH
>THERMO40_P640563869 YP_001244934 Tpet_1344 transcription-repair coupling factor [Thermotoga petrophila RKU-1]
----------------MVEILLLPNERFSNIEG----------YIFYPSRDVLPLEDVVLSPEIKGKRIEILWKLLKIVTTLKALTEKVFPPDFLRENSLMITRSTK--LALSPEKLVEMGYERVFTVQNVGEFAIRGDIVDIYSPGNDFPVRIELFGDEIEEIRFFNVDTQRSFQSVDRTLILPFVDFYG----------------TLLDFVKTE--KEMRDL-------------------LKERYNDVVLKNVEKGS----APLSTRIE----ESLPILDVDEIEEGGLVVHREHGIAIFEGVVRLK--GGERDYLKLKYE-DAVLYVPIEKIDRVHKYIGD-PSQVKLDRMNRGKWKQTLKKVREDIEKKIRELVELYMRRQEIQGLSLPGDPELEEKFAESFPYIETPDQQQSIEEVLSDLASEKPMDRLLCGDAGVGKTEVALRAAFRAVASGKQVAVLVPTTVLARQHYENFKERMEPFGVKVELLDSSRTPREKKEIIEKLKKGEIDIIIGTHSLLNERIEFSDLGLVIIDEEQKFGVEQKERFKKLRLSVNVLTLSATPIPRTLHMALSGMKDFSVINSPPPGRKPVYVYVAEYSDDLVKGAVIREINRGGQVIYVHNRVEELPEVFEKLKRMFPELEIAVAHGKMSRRTMERIVHEFYRGNIDVLLCTTIIENGVDIPNANTLIVDDAHRYGLSQLYQLRGRVGRSDRRAFAYFLYPKGT--PRSALERLKVLKSYTGFGSGLQIALKDMELRGVGDVLGLEQHGNVVSVGLKLYNEILKETITRFK--VNVEIEPPGRFFIPEDYVQNPVERLRLYRRLASSLDEEDLEEILEEMRDRFGEPPEEVKLLVDYFRLRIRASKLGVKKIR---------FDH
>THERMO40_P642488544 YP_001739369 TRQ2_1342 DEAD/DEAH box helicase domain protein [Thermotoga sp. RQ2]
----------------MVEILLLPNERFSNIEG----------YIFYPSRDVLPLEDVVLSPEIKGKRIEILWRLIKIATTLKALTEKVFSPDFLRENSLMITRSTK--LTLSPERLVEMGYERVFTVQNVGEFAIRGDIIDIYSPGNDFPVRIELFGDEIEEIRFFKVDTQRSFQSADKTLILPFVDLYG----------------TLLDFVKTD--KEMRDL---------------LKERYNDFFDEVVLKNVEKAS----VSLST-------ESLPILDVDEIEEGGLVVHREHGIAIFEGVVRLK--GGERDYLKLKYE-DAVLYVPIEKIDRVHKYIGD-PSQVKLDRMNRGKWKQTLKKVREDIEKKIRELVELYMKRQEAQGLSLPGDPELEEKFAESFPYIETPDQQQSIEEVMSDLASEKPMDRLLCGDAGVGKTEVALRAAFRAVVSGKQVAVLVPTTVLARQHYENFKERMETFGVKVELLDSSRTAREKKEIIEKLKKGEIDIIIGTHSLLNERIEFSDLGLVIIDEEQKFGVEQKERFKKLRLSVNVLTLSATPIPRTLHMALSGMKDFSVINSPPPGRKPVYVYVAEYSDDLVKGAVIREINRGGQVIYVHNRVEELPEVFEKLKRMFPELEIAVAHGKMSRRAMERIVHEFYRGNIDVLLCTTIIENGVDIPNANTLIVDDAHRYGLSQLYQLRGRVGRSDRRAFAYFLYPKGT--PRSALERLKVLKSYTGFGSGLQIALKDMELRGVGDVLGLEQHGNVVSVGLKLYNEILKETITRFK--VNVEIEPPGRFFIPEDYVQNPVERLRLYRRLASSLDEEDLEEILEEMRDRFGEPPEEVKLLVDYFRLRIRASKLGVKKIR---------FDH
>P637628446 YP_196685 ERGA_CDS_07590 Transcription-repair coupling factor [Ehrlichia ruminantium Gardel]
NIPHTLEAFAIAEMYNSAIYITNQEDSLYQLSSIFQFYITNLKVIVVPAWNLIPYKKNSPNNLIMAERIKSLYSLYIIITTTNAVIQKVLPRNIISQIVFKITVQENLPIHYIKNYLITHGYTQYSTVQDIGEFCVNNNTIDIFPITYPNPIRIYLNNDHVESIKTFDCKTQLI-HSINEIFIYPTSEVIKQQKKYIGEENFLPLFYDIFNYIQDI--QYIKSQHH-AYKLLIACHSVETLEYIQSKLATIAILQINNSFSTESTIIVTEDDLLSTISDIINYTIDLNIGDIVIHKDYGIGKIAKLETIKVD-NYHDFLKIEYYNNDKLFLPVENINLITRYSNQ-DSNITLDRLGSTSWQQRQTKLKNHIQKIAKELIKIEAARQLMQGTPFLPNN-IYKNFCDEFAYTETTDQLQAIQDIENDLSSGKIMNRLICGDAGFGKTEVALRAAFLVAIKNYQVAVIVPTTLLCKQHFTVFTERFKNFPIKIQQLSKIVNKHEIKKIKENISYGHTHIIIGTHAILSQDVNFFNLSLVIIDEEQQFGVKQKELLKKIKANVHVLSLSATPIPRTLHMSLCGIKNFSLIKTPPKNRLPVITYTIHYTDNTIKNAIIHEYERGGRTFYVCPQINNIKNINDNLIRLLPDIKIGIAHGQLPSHELENVMNDFLDGKFTVLLTTSIIECGLDIPHANTIIIHNADMFGLAQLYQLKGRVGRSNIKGYAYFILSD--NINNISERRLEIIRSIDSINSGFALSLHDMDIRGFGNLIGEEQSGNIKDIGIELYQQMLEEELNTNN--HHININININIRIPEHYISDIGLRMNMYKRIGNLRTKEEIDSFHIALIKKFGKLPDEVENLLDIIYIKQLCIPIGIYEIEQVKNIVNFKIHN
>P639304788 YP_180591 Erum7290 transcription-repair coupling factor [Ehrlichia ruminantium Welgevonden (ARC-OVI)]
NIPHTLEAFAIAEMYNSAIYITNQEDSLYQLSSIFQFYIPNLKVIVVPAWNLIPYKKNSPNNLIMAERIKSLYSLYIIITTTNAVIQKVLPRNIISQIVFKITVQENLPIHYIKNYLITHGYTQYSTVQDIGEFCVNNTTIDIFPITYQNPIRIYLNNDHVESIKTFDCKTQLI-HSINEIFIYPTSEVIKQQQKYIGEENFLPLFYDIFNYIQDI--EIFAQYHH-AYKLLIACHSVETLEYIQSKLAINIAIQINNSFSTESTIIVTENDLL--ISDIINYTIDLNIGDIVIHKDYGIGKIAKLETIKVDY--HDFLKIEYYNNDKLFLPVENINLITRYSNQ-DSNITLDRLGSTSWQQRQTKLKNHIQKIAKELIRIEAARQLMQGTPFLPNNT-YKNFCDEFAYTETTDQLQAIQDIENDLSGGKIMNRLICGDAGFGKTEVALRAAFLVAIKNYQVAVIVPTTLLCKQHFAVFTERFKNFPIKIQQLSKIVNKHEIKKIKENISYGHTHIIIGTHAILSQDVNFFNLSLVIIDEEQQFGVKQKELLKKIKANVHVLSLSATPIPRTLHMSLCGIKNFSLIKTPPKNRLPVITYTIHYTDNTIKNAIIHEYERGGRTFYVCPQINNIKNINDNLIRLLPDIKIGIAHGQLPSHELENVMNDFLDGKFTVLLTTSIIECGLDIPHANTIIIHNADMFGLAQLYQLKGRVGRSNIKGYAYFILSD--NINNISERRLEIIRSIDSINSGFALSLHDMDIRGFGNLIGEEQSGNIKDIGIELYQQMLEEELNTNN--HHININININIRIPEHYISDIGLRMNMYKRIGNLRTKEEIDSFHIALIKKFGKLPDEVENLLDIIYIKQLCIPIGIYEIEQVKNIVNFKIHN
>P637698710 YP_303394 Ecaj_0765 Transcription-repair coupling factor [Ehrlichia canis Jake]
NIPHTFEPFVIIKMYASAIYIVDKETQLHDLASIFKFYIPSLEVITFPAWNAIPYKKNSPHNSVMAERIKVLYSLYIILSTTNAIMQKVLPQNIILQSVLKITLQQNITKHDIEYYLTHYGYNQYSIVQDTGEFAILNNSIDIFPMTYKNPIRIHLHNNFIQSINYFNHTTQLI-DFLDEILIYPTSELIKQKAKHTGEENFLPLFYNIFNYIPQNSTEILTQYNTTCQKLIIACNSIGSLEYIQNKLKTYITIPTNQSFITKSTIVITEHDLLYKISNIINNNTNLDIGDIVIHKDYGIGKIVELETTKVDY--HDFIKIEYYNNDKLFLPVENINLISKYGQQ-NPNVTLDKLGSTSWQQRKTKIKNHIKKIARELLAIEAARKLSTGQIFCKDEN-YQHFCNEFSYTETEDQLQAIKDMEHDLSSGKIMNRLICGDVGFGKTEIALRAAFLVANKNYQVAVIVPTTLLCRQHFIVFTERFKKFPIKIKQLSKIVERSEIKKTKESLSCGQVQIIIGTHAILAKDVTFANLSLLIIDEEQQFGVKQKESLKKIKTNVHVISLSATPIPRTLYMSLCGIKDLSLIKTSPKNRLPVTICTTHYDDTIIKDAIIREHNRGGRVFYVCPQISNIKSISDNLTKLVPGIKINTAHGQLPPTQLDTIMNDFFDGKFTILLTTSIIECGLDIPFANTIIIHNADMFGLAQLYQLKGRVGRSNIKGFVYFIL--SEKVTNKPTTKLEIIQSINSISSGFTLSLHDMDIRGFGNLVGEEQSGNIKDVGIELYQQMLEEELNIHN--DHINISINVNIRIPEHYIKDIGLRMRVYKKIGNLKTKQEIDNYHIELINKFGNLPNEVENLLNTIYIKQLCANIGIYEIEQVKNIIYLRIQS
>P637901374 YP_507071 ECH_0250 transcription-repair coupling factor [Ehrlichia chaffeensis Arkansas]
NIPQTLEPLVIIKMYISAIYIVNQETQLHNLASIFKFYVPNLEIIIFPAWNSIPYKKNSPHNSVMAERIKTLYSLYIIISTINAITQKVLHQNIILQSVLKITSLQNITKNHIEDYLTNHGYSQYSIVQDIGEFATYNNIIDIFPTTYKNPIRIHLNNNLIQSIHYFNRQTQLI-DSLNEVVIYPTSEIIKQKKKHIGEENFLPLFYNIFNYISQNTTEILTQYIKTCHKLIIACYSTGSLEYIQNRLRTSIAIPIYHSFISKYTIVIAEHDLL--ISNIISNDTNLDIGDIVIHKDYGIGKIVALETTKVDY--HDFIKIEYYNNDKLFLPVENINLISKYGQQ-NVNVTLDKLGSTSWQQRKTKIKNHIKKIAKELLTIEAARRLSTGKSFFPDEN-YKHFCNEFSYTETEDQLQAIKDMEHDLSSGKIMNRLICGDVGFGKTEIALRAAFLVASQNYQVAIIVPTTLLCRQHFIVFTERFKKFPIKIKQLSKIVARSEIKKTKESLSCGQVHIIIGTHAILAQDVTFANLSLLIIDEEQQFGVKQKELLKKIKTNVHVISLSATPIPRTLYMSLCGIKDLSLIKTPPKNRLAVTTYTTYYEETIIKDAIIREHNRGGRVFYVCPQISNIKSISDKIRKLVPEIKMNTAHGQLSPTQLDTIMNDFFDGKFTILLTTSIIECGLDIPFANTIIIHNADMFGLAQLYQLKGRVGRSSTKGFAYFILSEKA--TNKSAIKLEIIQSIDSINSGFNLSLHDMDIRGFGNLVGEEQSGNIKDIGIELYQQMLEEELNIYS--DHINININVNIRIPEHYIQDIGLRMRVYKKIGSLKTKEDIDNYYIELTNKFGKLPNEVENLLNTIYIKQLCANIGIYEVEQIKNSILLKIDS
>P643705682 YP_002563235 AMF_091 transcription repair coupling factor (mfd) [Anaplasma marginale Florida]
GVAPEFGDMLMAQMCEPFVFVVQEGTSLAHLAKTLKFFDRERDVFILPKWDSIPHKGVSPSSLVMATRMKCLLDIYVMLTTSGAVAQKVLPAHSVASATITVAPGDGLSMDALVQHLVACGYTQSSAVREVGSFAVRGEIVDIFQPIDNKPTRIDFCYDAVESIRCFDLDTQITDGALPSLVIYPASEVIKTEEKCMGEEQWLPLLQTIFDYVPNAKLAVAADYINAHKTLILACYSEGSLLYFIDKFKAL---PTSCDVVTHDFIVITEYSLL--SGTVVSEDTCLAVGDVVVHKDYGVGIFNALRTLSVCGHLHDFVEILYRNNDKFFVPVEDIDLITKYGT--NTDVVLDKLGSTSWQERSAKLKKRIKDIAQTLLHSEAMRVLAEGNKFLANQR-YLDFCKEFPYVETEDQLKAISEVEEDLASGKVMDRLICGDVGFGKTEVALRAAFLVINEDKQVAVIVPTTLLCRQHLAAFRERFQNYDINVQQLARS-SATQKSKVKKALENGDINIIIGTSALLAEDIRFLDLSLLIIDEEQHFGVQQKEQLKKLRNDVHVLSLSATPIPRTLHMSLSGIKNLSVLRTPPMGRMAVDIAIIQYDGNIIKTAILDEVSRGGRVFFTCPFISDIDGVLADLQKLVPNVKVEVAHGRTSTRALDKIMNDFFDGKFSVLLTTSIIESGIDIPFANTIIVHNADMFGLAQLYQLKGRVGRSTLKGYAYFIVSKKALPDSPGMKRLEAVRSLNSVGSGFALALQDMDMRGFGNLVGEEQSGNIKEVGIELYHKMLEEAIAACQ--HSVKVGVDANVRIPESYIRELDLRIRVYKKISSLKTAEEADTCFVELVNRFGAPPPEVMNLLNVMRIKQLCSALGIQEVTQAKRHVTFSLSQ
>P637898956 YP_504735 APH_0107 transcription-repair coupling factor [Anaplasma phagocytophilum HZ]
GIAPELEDALITEICRSFVCVLQDDKPLELLVKTLKFFDSTHNILLFPAWDTCTYKHTSPSSYVMTHRVKCLLDLYILLTTISALIQKVLPKNAVSSSTLHIEAGKSLSMDELTLHLIEHGYVKSTVVQEVGSFAVRGDIVDIFQAVNENPVRIYFDYDIVESIKFFDPDTQITCEQILDIVIFSASELIKNDGKFEGEEQLLPLLQTLFDYIQEAELNHMQEAKK---QVLLACYSEESMQYLVEKFKHSTAIPFQHDVETEDFIIITEHSLLGRRRTVTNNASELTIGDVVVHKDYGVGIFIALRTLTVGC--HDFVEIKYRNDDKLFVPVEDTDLITKYGI--NTDVVLDRLGSSAWHDKQNKLKKRIDDIAKTLLHAEAMRKLADGSRFLP-SSLYIDFCKECPYVETEDQLKAIADVENDLARGKVMDRLICGDVGFGKTEIALRAAFLVVNEDCQVAVLVPTTLLCRQHFLAFKERFKNYKVNIQQLSKA-TAKKKQQIREGLEEGSINIIIGTSALLSDSIQFLDLRLLIIDEEQHFGVQQKEKLRLLKHDVHVLSLSATPIPRTLHMSLSNIKDLSILRTPPIGRTTVEISITHFDEKTIKTAILNEVNRGGRVFFTCPLIADIEPVLTRLQKLVPEVKIAVAHGGTAPLALDKIMNDFFDGKFSLLLTTSIIESGIDIPFANTIIIYNADMFGLAQLYQLKGRVGRSTTQGYAYLILSNKATSNSPGMKRLEALKSLNSVGSGFALSLQDMDMRGFGNLVGEEQSGNIKEVGIELYHRMLEEALETCK--HNIKVDINANVRIPESYIQELELRMQVYKKISSLKTPEEISRYSEELKDRFGMPPREVINLLDIIHIKHLCARIGIAEITHFKNHLTLLFG-
>ACTINO135_GEBA2501579483 Apar_0124 transcription-repair coupling factor [Atopobium parvulum IPP 1246, DSM 20469]
SLSQSARPLMLAALWSPCLLVVAGEDAADRTARSLAAWLGNDAVLRYPNRKDYPWSDATPDDAIIGARCRAIAKLVIVVASAHALMRRVPPVGSGYFLPATFTVGDD-PFEDVASLLVGMGYADTGEVDAPGTFHIHGDTVDIFPAQATSPVRIEFFGDEIDRIRRMVAATGQTIGAIDEVTVAPARELAFTKEQAPALERYLPVLYSPLEHISSETLGRVRQLVQDRDAVVFAVPDRAAREHLKLLFSDFTDAPVPAGIIIPTLSVLSVSDLTARPTTVTFPF---KPGDYVVHATHGIAHFTAIVRQEVAGRERDYFLLEYANDDKLYVPLEQVDRITRYVGPDGNNPRLTRLNTADWSRATNKARKSAKKLAFDLVDLYTRRASVPGYAFSLDTPAQEEMESSFPYQLTPDQESAVADIKLDMEARKPMDRLLCGDVGFGKTEVALRAAFKACQDARQVMILCPTTILAQQHYETFFSRFAPFDLKVSVLSRFVTPAQQRKALEGFADGTIDVLVGTHRLLSADVNPHDLGLVIIDEEQRFGVQHKEQLKNMREQVDVLTLSATPIPRTMQMAMSGVRDMSLILTPPPGRKPVQVTVGEYNPDLVSAAIRSELEREGQVYYVSNRVTTIDEAVARVEEAAPEARVGVAHGQMSAREVENVMLAFQEHEIDVLVATTIIESGIDNSHTNTLIIEDSQRLGLAQLYQLKGRVGRGRQQAYAYFMFPAELPLTEEATERLTAINEFQDLGSGMRIAMRDLEIRGAGSLMGAEQHGNLSSVGFDLFTQMLGEAVAEAR-GTEVTINLPADFFLDEDYLPEVDRRVLVYRRLAAATELSDIDALQQDTENSFGALPLAGKNLFDRARVRIRAQRLGATSVS-LTNGRLVYLGV
>ACTINO135_GEBA2500930878 Ccur_08480 transcription-repair coupling factor (mfd) [Cryptobacterium curtum 12-3, DSM 15641]
GLAASARPFFTAARFAPTLVIVAGEESAADFARTLSAYVGDNRVLRFFERKDYPTASTPVDVHAVACRLQALHALCIVVASSRALMRLMGPVRSRFYLPLTFTAGMDISFEAATEELVACGYLNTGELSGPGTFCVGGGTIDVWPGNLSYPVRIDFFGDEVDEIRRIVPATGQTIARIDKVDIYPLREYMPDRAYNEAADALLPYLYTLGDFLPSDALGRLISLTQADFTVVFSAPSYRAREDMKLAFVEVVEADIPLGLIIPKIALISLSDTQGARVDITEITFPFNPGDYVVHAAHGIAFFRDVVRQEV-GSLRDYLLLEYAEGDKLYVPVEQLDRVTRYVGPEGSSPRLTRLNTSDWSRAMGCARKASKKLAFDLVDVYTRRSAVSGFQYSADTPWMRQMEEDFPYQETPDQLAAIADVKADMRSARPMDRLICGDVGFGKTEVALRAAFKATQDGKQVMVLCPTTILAQQHYTTFKDRFEEYGVTVEVLSRFRFSSEQAAALSGFAQGTVDVLVGTHRLLSRDVNPHDLGLVIIDEEQRFGVGHKEQLKNLRESIDVLTLSATPIPRTMQMSLSGVRDMSLIMTPPDDRKPIKVHVGEWDPDVVSDAIRRELARNGQVYYVSNRVRTIDDAVARVGQAAGEARIGVAHGQMSKEQLEQVMEEFAAGEIDVLVATTIIESGIDNPHTNTLIIEDSQRLGLAQMYQLKGRVGRSSLQAYAYFMFPENVPLTEEATARLEAVGEYQELGSGMKVAMRDLEIRGAGSMLGAEQSGNMSAVGFDLFAQMLTEAVRATREGSDITVNVPDHTYIPEEYVPDADARVLAYRRVASADTPEVVDGIADELCARYGAAPRAAQNFFAKARIKARAHQMGVTAVSIVAGKLNIEPIA
>ACTINO135_GEBA2500928504 Shel_13300 transcription-repair coupling factor (mfd) [Slackia heliotrinireducens RHS1, DSM 20476]
GVAASARPFITAAVYATMFVVVPGSEGAEAYARTLSAYLGEERVALFPARKDFPFAPKKADLRDIGMRAKAAWSLVVVVASASALVRMLPPADARTFAPV---VCRAVSFEDMQNALVARGYENTGELDGPGTFCIRGGIIDVFPGTGVYPVRLDYFGDEIDEIRRVVPSTGQSISSLDKFEIFPVREYALSKTDFEGADALLPLLYTLGAYVRKGALGRLRGFVNQDYTTVFSVPDFRARQDMKLLLVDIVDVDVPLGMVIPKLAIVSVHDLQGRITEITFPY---KPGDYVVHAAHGIAYFRGLVKQDLGGVTRDYLQLEYAEGDKLFVPVEQLDRVTRYVGPEGNDPRLTRLNTSDWSRALTKARKATKKLAFDLVDVYARRASVQGFRYSPDTPWQKEMEESFPYQETPSQLAAIAEIKADMQSSKPMDRLICGDVGFGKTEVALRAAFKAVQDHKQVMVLCPTTILAQQHYTTFKDRFDPFGVRVDVLSRFRTNQQQKATLEDFEKGEVNVLVGTHRLLSRDVNPHDLGLVIIDEEQRFGVGHKEQLKNLREQIDVLTMSATPIPRTMQMSLSGVRDMSLIMTPPDERRPVEVHVGEWDVDVVSDAIRRELQRGGQVYYVSNRVRTIDDAVERVGAAAAEARVGVAHGKMSKDELERVMEDFAAGDIDVLVATTIIESGIDNPHTNTLIIEDSQRLGLAQMYQLKGRVGRSSVQAYAYFMFPSTIPLTDEAQARLEAINEHRDLGSGMQVALRDLEIRGAGSLLGAEQHGNMSAVGFDLFAQMLATAVASAREGSDITVNLPASTFIPEDYVPDTDERVLVYRRAASADSISAVDDIERALAENHGEEPVECVNFFAKARLRAWANEHNVKTISVVGGKLTMPIGL
>ACTINO135_GEBA2501582083 Elen_1292 transcription-repair coupling factor [Eggerthella lenta VPI 0255, DSM 2243]
GVASSARPFLVAARFAPTLVVVAGEDAAVAFSRSLAAYLGDERVMRFPERSDYPFVPKPSDPAQVARRMEAVHALVVVVASARALVRALPPAGSDVHVPVALSAGREVEFEDFAHALEERGYRNTGELDGPGTFAVRGGTIDVFPGNLVYPVRLDFFGDELEEIRRIVPTTGQTIQALPDVSIYPVVEFSCSKRRFDGSDMLLPYLYTLGDYVRPGALGRLRSLVDTDYTVVFSASNFRARQDMKLAFVDVVDVDVPLGMIIPKLAIVSLSDTQG-ITEITFPY---QPGDYVVHAAHGVAYFKELVRRDVDGTARDYLLLEYSEGDKLYVPVEQLDRVTRYVGPEGASPRLTRLNTADWSRALAKARKATKKLAFDLVDVYARRASVQGYRFGPDTAAQREMEEAFPYQETPDQLAAIADVKADMQSAKPMDRLVCGDVGFGKTEVALRAAFKATQDSKQVMVLCPTTILAQQHYTNFKERCEPFGVRVEVLSRFRTPAQQAAALKGFQEGDVDVLVGTHRLLSRDVNPHDLGLVIIDEEQRFGVGHKEQMKNLRESIDVLTLSATPIPRTMQMSLSGVRDMSLILTPPDERRPVEVHVGEWDPDVVSGAIRRELARGGQVYYVSNRVRSMEEAVRRVTAAAGEARVGVAHGQMSKEQLERVMEDFSAGELDVLVATTIIESGIDNPHTNTLIIEDSQRYGLAQMYQLKGRVGRSCTQAYAYFMFPEHMELTEEAAARLTALNEHTDLGSGMRIAMRDLEIRGAGSLLGAEQSGNMSAVGFDLFAQMLNQAVSATREGSDITVNVPGHTYLPEEYVPDADERVLWYRRIASAATEQAVEDVRADLADKRPDMPQAAKNLLEKARIKAYANEHHIKTVSVTAGKLVVEPID
>P640519959 YP_001204358 BRADO2286 putative transcription repair coupling factor [Bradyrhizobium sp. ORS278]
DAPLGLVASHLLRLWQGVVFLSSDEARAERIAAVLHAMDPDCGVLVLPRFDTVPFDDAAPSRELSGRRAHVLRRLPLLISTVEAVLPLVPPQRCWTAASLHLKAGQPIDLEGFRNSLAKLGYATDEPPDDPGSVLFHGQTTELFPAGALGPVRINHADGMISDIHFFDLGHQNAVVAAETLVIDPMSER-----SVGGEA-------DLFTYLDGS--ATLRRFRQRGARILFTAATERDLQGMERVAGEI---DLDRGFTTGTLIVITAAEVLGS--QAAVAGITIVPGSAIIHLQRGLALLDGLELISA-PNVRDMIRLVFANDEAILVPIADLGLIWPYAGD-PSGVKLDDADGRSWAARCLRAEDEIDRTAVRLSDQIRARRRAEAPRIVAPAVEYERFVARFPYLVTPDQAAAIEDVLKDLGAGHPMDRIVCGDVGFGKTEIALRAAAATVFAGRQVALIVPTTVLAAQHVQTFVKRFAPFGISVGHLSRLSTTADARSTRRQLADGTLKLVIGTTALAADDVRFADLGLVIVDEEQHFGAADKARLSALRAGVHALTMSATPIPRTMAGAMAGLRDLSIIATPPVRRRPVLTKVEPLLDATLSMALRREHRRGGQSFVICPRIKDLAPMRERLSHLVPELGIAMIHGRMPAREIDAEMMRFVAGKADILLATNIVENGLDIPRANTILISGAEHFGLSQLHQLRGRVGRGGIRAYAYLLADTPG---DAAQKRLSALQELHFAGAGFQISARDLDLRGAGDLLSEQQAGHVQVFGPALYQELLSRALQ----GWLPELRIDRPAFLPSDYVQDQVTRLDVYARLAHAETVADIDDIEDDMQLRFGHPPQEASNLIASARIRLDCHALGIARLDVGTEGIAARLRP
>P637372241 NP_771307 bll4667 probable transcription-repair coupling factor [Bradyrhizobium japonicum USDA 110]
SSPLGSMALHLLAQWKGIVFLAESENRAERLGSVIHALDPACEVLVFPRLNTLPFDQLEPSHELAGRRASVLRRLLFLVSTAEAVMERLPPPASLSRLSVSLKVGGAFSERDLRGRLEELGYDLEDEPDYPGGALFHGQTFEIFPAGALGPFRIEHSGRAISRIVAFDPKEHDIIE-TSELLVDPMSERLA----------------TLFDYCGRA--KALRAFRRAGSRLILVAAQEDDLRVMERMKAQALLADLDAGFVVPGLVVVTASDVLGSAWSAAFDHADVEQGTVVVHLQRGLAVLDGLQTVNTGGALREMIRLVFAGDNAVLVPPPDLALMWPYATEPGK-LALDKADGSSWWARRTEAEREIQIAGKVLAKHISQRRRRRADKLVPPGSAYEKFVARFPYFTTVDQAKAIRDVLEDLASGHPMDRVICGDVGFGKTEVALRAAAAVVLSGKQVAIAVPTTVLARQHVATFQKRFAPFDIEVGNLSRATSGAELRATREGLRSGRIKVVVGTQALGGKDVKFDDLGLVIIDEEQHFGAAEKARLSSLAKNVHVLMMSATPIPRTLAAGLAGFRDLSVIASPPVHRLPVATRIAPLSDAAIASALLREQRRHGQSFLICPRIQDLDPMLARVQAVAGDLRIVCLHGRLAADEIDDRMMSFVEGRADVLLATNIVESGLDIPRANTIVVCWPEKFGLAQLHQLRGRVGRSGIRAFAHLLTETNS---GQSEKRLAVLEEFSRPGAGFAISERDLDLRGAGDLFSEQQSGHVQVFGPVLYSHLLKMASEKVDEEWVPDLNLPVADMLPETYVHSEPVRLELYARAARCSSEDDLVDLEEETSRRFGPLPKVARDFFAAAKLRLECKRRGIIRLDVGLGAVAATFLP
>P640556071 YP_001237239 BBta_1082 putative transcription repair coupling factor [Bradyrhizobium sp. BTAi1]
SSPLGMLALYLAAQWRGVVFLAENESRAERLGSIIPVIEPACDVLVYPRLNTLPFDQLEPSRDIAGRRSSVLRRLILLITTAEAMMELLPLPTNWSRIGFQLRTGAIYSEADLEARLKALGYDLDDSPDYPGGVLFHGNTFEIFPAGALGPLRIEHSGGRIRRIAAINPMDQEVISETNELFIDPMSERLA----------------SLFDYCSRA--KALRAFQRGDARVVFVAAVESDLRLMARMKAELLAG-FDAGFIVPGLVVITAADVLGSAWTPGFEAGDLELGSVVVHLQRGLARLGGLRSM---GSGREMVRLVFAGNDAVLVPLAELALIWPYAAELGNT-SLDKADGSSWRPRRAAAETEIHVVAKELAKQMRQRRRRPAPKLVPRPAAYEKFVARFPYFTTPDQAKAIRDVLDDLASGHPMDRIVCGDVGFGKTEVALRAAAAAVLAGKQVAIVVPTTVLARQHFETFRKRFAPLGFDVGNLSRVASAADARDVRERLKSGELRIVVGTLSLASKEVKFADLGLIIIDEEQHFGAAEKAMLSNLNKNGHRLWMSATPIPRTLAAGLTGLRDLSVIATPPVHRVPVATKVAPLSDIAIAAALVREHRRNGQSFVICPRIQDLDPLLAKVHALVPELRINTIHGKLPTDEIDERLMGFVEGRTDVLLATNIVESGLDIPRANTIVVCWPEKFGLAQLHQLRGRVGRGGIRAFAHFLTEGGS---DRSEKRLSVLEELSRPGAGFAISARDLDLRGGGDLRSDRQSGHMQVFGPTLYGHLLTLALEGDRDGWIPELNLPIPELLPASYVQSEAVRLEIYARAARCRSDDELEELEDETQRRFGKLPSEAGNFFAVARLRVNCRERGIMRLDVGPDAIAAMLAG
>P640114149 YP_001045403 Rsph17029_3540 DEAD/DEAH box helicase domain protein [Rhodobacter sphaeroides ATCC 17029]
KPPIGLEVLRLLDLG-AHLHITSDDARAEEIVRFLREIAPELRPDVFPCWDCLPYDGASPTPDAMGRRMALLDAVRLVIVGPSGLLQRVPPVEAMRRFAV--RAGEASDLCALRTFAARAGYAEDDRIDEPGEIAFRAEVVEVFAAGAERPVRIGLEKDRVTGIRRYDPVSLRSMEDVPEIDLLPVTELPE---PPRGAEHRLPRAWTLPDHLGQGGIAALARFIGEGRRVVLLAATPRDLRALGRATGAVILSTLARGFDLPGTAVVTARDVLGSVSAWQVTPDALAEGDFVVHEDRGLGRLQGLE--PLGG--REAIRLGYAADQHLLVPVEEAGRIWRYGT--GADVSLDRLNGAAWTNRRKKLDEGIAEAARALVAAAKERAAKSARAFEPPSDIYERFAGRFPFTLSPDQRRAIAEVRDDLVAGRPMNRLVLGDVGFGKTEIALRAAAAVALSGAQVALVAPSTVLARQHAETFRRRFEGFGVTVAHLSRLVPSKEAKAARDGLRDGSIRIVVGTHALLGKGVAFADLGLLIVDEEQRFGAAHKARLRALGADLHVLTMTATPIPRTLQTALVGLQDLSEIATPPARRRAVRTLTAEEDAAVLRQALLRERRRGGQSFVIVPRIAEIDATEARLRDLLPEAQLRVAHGDLAPEELDRAMVDFAAGRGDILLATSIVEAGLDVPRANTMIVMQPQLFGLAQLHQLRGRVGRGARQAYCYLMHGPGDDLDEAALRRLGTLQAFDRLGAGAAIAAEDLDQRGAGELFGERQSGHVRLIGLPLYQHLLAQAVRAARG-QHVSLAMEAEGALPADYIPEAGLRLGLYRRLARAADPREVALLADEIEDRFGPPPAAAAGLLVAAEIRALARSLGIERVSAGPSGVALDLAP
>P643599333 YP_002496892 Mnod_1599 DEAD/DEAH box helicase domain protein [Methylobacterium nodulans ORS 2060]
AIPSGALAVALIGLA-PLVFLARDGRRLDEIAAILRSLAPARQVAVYPEWDCLPGDRTSPSRGTMGARAGVLRWLDLLLSTAPALIQRVPPPEIWAEARVALRVGDGFEAASLTAALTRLGYILDERVDEPGEIAVRGRTLEVFPAAAPRPCRIEHEDGRITAIRSYDPVTQRSVD-AAELVIDPATELILGPDPFTGQEHRLPRFYTVLDALPGA--AAFGRFLRAGDRVLLTGPPGPLRRLAREALGHVLEAPIGAGFRVPEVTVVAAADLLGLAAALPFGEIDLHRGDVAIHEDHGLCVFEGLE--PVGGEAEEAARLRFADDAVLLAPLSQADRIWRYGSA-AEAVSLDRLDGGTWEKRRATVAAAVAATARRMLDLAETRRRARAEPLIPPDRQMERFCAGFGFSLTPDQAAAIDAVLEDLAAGRPMDRLVCGDVGFGKTEVALRAAAAALFAGRQVALAAPTTVLVRQHTETFRRRFARFGIVPAQLSRLTPPAEAKRVKAGLAEGSVRLVIGTHALAGRGVRMPDLGLVIIDEEQRFGTAQKERLRRAARGAHVLTLTATPIPRTLQTALVGLQDLSVIATPPVVRQPIRTVIAPFAPDTVRAALMREHRRGGQSFVVCPRIADLAPMEAQLRSIVPELTIALAHGELPPDTMDEAMVRFAAGEGDVLLATNIIESGLDVPRANTMLVWHPERFGLAQLHQLRGRVGRGQRRAAAYLLTDPQARLPAASEKRLRTLAALDRLGAGFALSARDLDLRGAGDLFGEDQAGHVKLIGLDLYRDLLERAVRAAR-GAPAEIRLGLAGRIPQEYVPEPELRLSLCARLARLRTADEAEALRDEIEDRFGPLPPEVDTLLTLARLRAACRDLGIARLSAGPQGLAADFE-
>P641640823 YP_001767498 M446_0501 DEAD/DEAH box helicase domain protein [Methylobacterium sp. 4-46]
ALPDGALAEALLSLS-PLVLVARDARRLDGIAAILRALAPGLGVAVYPAWDCLPGDRTSPSRGAMGARAGVLRWLAIVLTTAPALIQRVPPPETWAQARVLLRVGEQVEAEALEAALTRLGYIPDERVDEPGEIALRGRTFEVFPAAAPVPCRVEHEDGHITAIRSYDPVTQRSLGEAAELLIDPATELILGPDPFTGQEHRLPAFYTLLDPVPGARLAAFGRFCEAGDRVILAGPGRALGRLAREALGHVLEAPIAEGFRVPDLTVIAAADLLGKPAALPFADPDLHRGDVVIHEDHGLCVFEGLELLR--GGGGEAARLRFADDAVRLAPLSEAGRIWRYGAA-AEAVTLDRLDGGNWATRRAGVEAAVAESARRMLALAEARRRATAPALVPPERQMERFGAGFGFPPTPDQAAAIDAVMADLAAGRPMDRLVCGDVGFGKTEVALRAAAAALFAGKQVAVAAPTTVLVRQHVETFRRRFARFGIVPAQLSRLVPPAEAKRVRAGLADGSVRLVIGTHALAGRGLVYADLGLVVIDEEQRFGAAQKARLRRAASGAHVLTLTATPIPRTLQSALVGLQDLSVIATPPVVRRPIRTVVAPFDPETVRAALTREHRRGGQSFVVCPRIADLAPMEARLRAIVPDLSLAVAHGEMPPAAMDEAMVRFAEGEGDVLLATNIIESGLDVPRANTMLVWHPERFGLAQLHQLRGRVGRGQRRAAAYLLTDPEAPPPPASEARLRALTALDRLGAGFALSARDLDLRGAGDLFGEEQAGHVKLIGLGLYRDLLERAIRAAR-GAPAEIRLGLAGAIPAAYLPEPELRFGLAARIARLRSPEEAEALRDEIEDRFGPLPPETETLLTLAGLRMACRDLGIAQLGAGPQGLAADFH-
>P641630095 YP_001757037 Mrad2831_4388 DEAD/DEAH box helicase domain protein [Methylobacterium radiotolerans JCM 2831]
LMPTGALAVALLAFA-PVVHVARDARRLEDLAATLRALEPDARVAVYPEWDCLPFDHASPSRATMGARAAVMRWLDFVLTTAPALVQRVPPPETWASARVTLRVGDPLDVAAATADLKRLGYILDERVDEPGEIAVRGRTVEVFPAAAPRPCRIEHAEGRVTAIRSYDPISQRSVE-ADELVIDPATEIILEPG----LDRYYPRLVTLLDYVPEARLKVLRARLK-AGDVVVLAGSVRPLRRLVRQIAELALEPLAAGFRVPEASVIAAADLFGPRAILPMGEVDLRPGDVAVDRDHGLCVFEGLEPVSAPGAPSEALRLRFAGDAILMVPVTQADRIWRYGSE-PDAVTLDKLDGGTWPRRRLEAEATMARTARLMLEAARARRETEAPVLAPPASEMERFAAGFGFAPTPDQAAAVDALMADLASGRPMDRLVCGDVGFGKTEVALRALAAAIFSGRQAALIAPTTVLARQHAETLRRRFGRFGVEVAQLSRLVAPAEAKRVKAGLADGTIRLVVGTHALAGGGVAFADLGLTVIDEEQRFGAKMKADLRRLADGGHVLTLTATPIPRTLQAALVGLQSLSVLATPPALRQPVRTVVAPFDAEAVREALIREHRRGGQSFVVCPRIEDIAPMAERLRALVPGLDILVAHGDLKPSAMDEVMVRFAEGDGDVLLATAIVESGLDVPRANTMLVWEAARFGLAQLHQLRGRVGRGQRRGTVHLLSDPAAPPPAAALQRLRALEALDRLGAGFAVSARDLDLRGAGDLVGEDQAGHAKLVGLGLYQHLLQLALTAAKGEWSPEIELGLPSRIPEDYVPEPEIRLSLYTRLLRLQDAEAIEALAGEVEDRFGAAPAPVLALFDLARLRAACCALGVARLRGGPQGVAADLRP
>P643524228 YP_002420263 Mchl_1460 DEAD/DEAH box helicase domain protein [Methylobacterium chloromethanicum CM4]
LVPTGALAVALLGFA-PLIHVARDGRRLDEIAAVLLALAPERTVAVYPEWDCLPFDRASPSRGVMGARTGVLRWLDIVLTTAPALLQRVPPPETWESAHIELRVGEPLDAEQLTAQLARLGYILDDRVDEPGEVAVRGRTIDVFPAAAPLPCRVEHDGARITAIRSYDPVSQRSRE-TERLVIDPATEIILDPDPFTGQEHRLARFYTMLDYVPEARLKALRAALKVGERVVLAGPKAPLRRLVRAAAAALAIEPVEAGFRVPQATVIAAADLFGPAAVLPIGEVELRVGDVSIDRDHGLCLFEGLEAIR--GDEEDALRLRFADDAILMVPVSQADRIWRYGSE-AEAVTLDRLDGGTWARRRLEAEATLAKAARAMLKAAQERREAHAPQIVPPEREMERFAAGFGYPLTGDQAGAVEETLADLAREMPMDRLVCGDVGFGKTEVALRAAAAAIFAGRQIAVMAPTTVLVRQHVETFRRRFARFGIEVAHLSRLVSPAEAKRVKQGLADGSVRLVVGTQALAGRGVSFHDLGLAIIDEEQRFGAKTKASLRKAAGDAHILTLSATPIPRTLQAAMVGLQSLSVIATPPAVRQPIRTVIAPFEESTLAAALRREHRRGGQSFVVCPRIEDIAPMAKRLHALVPGLDVVTAHGEMKPAEMDDAMVRFADGNGDVLLATSIIESGLDVPRANTMLVWDAERFGLAQLHQLRGRVGRGQRRGVVYLFGHPDKPLSPSTEKRLRTLEALDRLGAGFAISARDLDLRGAGDLVGDDQSGHVKLVGLGLYQHLLQLALRAAK-GWSPEVRIGLNGRVPADYIPEPEIRLSLYTRLLRLRAEAEIDALRDEIEDRFGPLPESVDALFTLARLRIGCLALGIVRLSGGPQGIAADFH-
>P641367090 YP_001638770 Mext_1298 DEAD/DEAH box helicase domain protein [Methylobacterium extorquens PA1]
LVPTGALAVALLGFA-PLIHVARDGRRLDEIAAVLLALAPERTVAVYPEWDCLPFDRASPSRGVMGARTGVLRWLDIVLTTAPALLQRVPPPETWESAHIELRVGEPLDAEQLTAQLARLGYILDDRVDEPGEVAVRGRTIDVFPAAAPLPCRVEHDGARITAIRSYDPVSQRSRE-TERLVIDPATEIILDPDPFTGQEHRLARFYTMLDYVPEARLKALRAALKVGERVVLAGPKAPLRRLVRAAAAALAIEPVEAGFRVPQATVIAAADLFGPAAVLPIGEVELRVGDVSIDRDHGLCLFEGLEAIR--GDEEDALRLRFADDAILMVPVSQADRIWRYGSE-AEAVTLDRLDGGTWARRRLEAEATLAKAARAMLKAAQERREAHAPQIVPPEREMERFAAGFGYPLTGDQAGAVEETLADLAREMPMDRLVCGDVGFGKTEVALRAAAAAIFAGRQIAVMAPTTVLVRQHVETFRRRFARFGIEVAHLSRLVSPAEAKRVKQGLADGSVRLVVGTQALAGRGVSFHDLGLAIIDEEQRFGAKTKASLRKAAGDAHILTLSATPIPRTLQAAMVGLQSLSVIATPPAVRQPIRTVIAPFEESTLAAALRREHRRGGQSFVVCPRIEDIAPMAKRLHALVPGLDVVTAHGEMKPAEMDDAMVRFADGNGDVLLATSIIESGLDVPRANTMLVWDAERFGLAQLHQLRGRVGRGQRRGVVYLFGHPDKPLSPSTEKRLRTLEVLDRLGAGFAISARDLDLRGAGDLVGDDQSGHVKLVGLGLYQHLLQLALRAAK-GWSPEVRIGLNGRVPADYIPEPEIRLSLYTRLLRLRAEAEIDALRDEIEDRFGPLPESVDALFTLARLRIGCLALGIVRLSGGPQGIAADFH-
>P642650008 YP_001923997 Mpop_1291 DEAD/DEAH box helicase domain protein [Methylobacterium populi BJ001]
MIPTGALAIALLGFA-PLIHVARDGRRLEDVAAVLRALAPERTVAVYPEWDCLPFDRASPSRGVMGARTGVLRWLDIVLTTAPALLQRVPPPETWDAAHVELRVGEALDPERLTAELGRLGYILDDRVDEPGEVAVRGRTIDVFPAAAPLPCRVEHDGTRITAIRSYDPVSQRSRE-TDRLVIDPATEIILASDPFTGQEHRLARFYTVLDYVPQA--KALRAALKAGERVVLAGPKAPLRR-LVRAIDDLAIEPVEAGFRVPEATVIAAADLFGPAAVLPIGEVELRVGDVAIDRDHGLCVFEGLEAIRA-GDEEDALRLRFADEAILMVPVSQADRIWRYGSE-AEAVTLDRLDGGTWARRRLEAEATLAKAARAMLKAAQERRKAHAPQIVPPEREMERFAAGFGFPLTGDQAGAVEETLDDLAREAPMDRLVCGDVGFGKTEVALRAAAAALFAGRQVAVMAPTTVLVRQHVETFRRRFARFGIEVAHLSRLVSPAEAKRVKRGLADGSVRLVVGTQALAGRGVAFHDLGLAIIDEEQRFGAKTKASLRKAAGDAHILTLSATPIPRTLQAAMVGLQSLSVIATPPAVRQPIRTVIAPFEEATLAAALRREHRRGGQSFVVCPRIEDIAPMAKRLRSLVPGLAVVIAHGEMKPAEMDDAMVRFADGDGDVLLATSIIESGLDVPRANTMLVWDAERFGLAQLHQLRGRVGRGQRRGVVYLFGHPDKPLSPSTEKRLRTLEALDRLGAGFAISARDLDLRGAGDLVGDDQSGHVKLVGLGLYQHLLQLALRAAK--WSPEVRIGLNGRVPADYIPEPEIRLSLYTRLLRLRTEAEIDALRDEIEDRFGPLPGSVEALFTLAALRIGCLALGIARLNGGPQGIAADFH-
>DELTA20_P637987656 YP_594682 LI0305 transcription-repair coupling factor (superfamily II helicase) [Lawsonia intracellularis PHE/MN1-00]
KAGLATQVKLSVDLI-KVLLIARNRDELGTLHSLISVFSEKSNNIFNNTWVTLPFTSRSLSKEGWAERLAALYALKVQILTIDNLLPKEVPLDFFDNQVIQLSVGEELSPDIILEQAITWGYDRVSMVSNPGEVSRRGDIFDIMSPGYHYPLRLDFFGETLEEIRFFDPLTQRSKY-IDNAIILPVYPVRSGTELLEQKDSLLPGCCTIEQWVNKDVWQAIKKWKQDKYQLILSFSSERSRNKFLNLAEQAIISPFRVGVDLSWILILGEDVLQ--SFKGLSRYDDLNPGDLLVHKNYGVARFGGLIRMDI-GISNDFLLLEYAGNDKLYLPVDRLSLTQRFKSVNESFPQLDRLGSTSWQASKDKAKKSIEKVAEDIIEMYAWRKVAKGFTYPPVGDLYREFEASFGFEETPDQARAIQDVLADMEKSEPMDRLVCGDVGFGKTEVALRAAFRAASEGRQVALLCPTTVLAEQHYYTFRSRLSGFGINVGLLSRFVPLQKQKEIFKAASSGQIDVLVGTHKLLSDSVSLPNLGLLILDEEQRFGVKHKEKLKKMKKNVDVLTLTATPIPRTLQLSMSGICELSVIETAPPERKPVATAIIKKNKEKLKEILERELAREGQVFWVYNRVQGLEQIVNFVKELVPEARVGVAHGQMPEKQLEENIHAFWHAELDILVCTAIIESGLDFPRANTLIVDQAHMFGLGQLYQLRGRVGRSDRQAYAVFVISDLESLSEQARERLRIILELDYLGAGFQVAMEDLRIRGAGNILGEAQSGHISRVGIELYLEMLEEAVTKLKGGPETELTLGLTAHIPQNYISDSHERLRWYKALSSAQSVMARNEIELELRDRFGVLPNELKAFIAVLNFKQFLTESQVIKAEIYEDKIKLVWPE
>DELTA20_P643581706 YP_002479495 Ddes_0910 transcription-repair coupling factor [Desulfovibrio desulfuricans desulfuricans ATCC 27774]
RSGMATRCRLAAEAF-TVVLVARDREEYNSARALLTLFTLADKSVSEPQWNTLP--PLSQDRASWSARLAALYGLRCIVCSVESLLLRHIPLDFFAARNLDLRKGSDYAPELLLDQAVEWGYERVPMVTRPGEMARRGDILDIFPTGHVKPVRLEFFGDTLDEMRVFDAESQRSLQGCDELVLLPASPLALDAKDGGGLGLLPGSVLLFEDWLPKDLWAGLKEWKSSRRQIVLSFSSGRSRAKFLKLAEQLVSPRSGAELVWDDVLVLGEDILY--VFKGLDSFDDLKPGDLLVHRDYGIGRFAGLHHLDL-NAANDFLLVEYSGRDKLYVPADRLGLIQRFKGTEGVEPALDRLGGAAWVAGKEKARKAIEKIAADLVEMYAYRKVTKGFRYDPPGELYHEFEATFGFEETPDQAKAIQDVLDDMDRPRPMDRLVCGDVGFGKTEVALRAAFRAASEGRQVALLCPTTVLAEQHYQTFRARLAGFPVNVGLLSRFVPRPRQKEVLKAAAAGQIDILIGTHRILSSDVKLPNLTLLVLDEEQRFGVRHKEKLKALKKNVDVLTLTATPIPRTLQLSMSGIRELSIIETAPQDRKPVASAVLRKDDNVLRKVLEREIEREGQVFWVYNRVQGLERVAEYVRGLVPDARVGMAHGQMSEAELEDTMHKFWHGELDVLVCTSIVESGLDFPRANTLVVDQAQMFGLGQLYQLRGRVGRSDRQAYAFFVVPDAERLTAVAEERLRIILDMDYLGAGFQVAMEDLRLRGAGNILGEVQSGHMCRVGLDLYLEMLEEAVGRLKG-SETELTLGLPAHIPASYIDDGRERLRCYKALTSAQGGAAREEIALSIRDRFGPFPEELANFLAVLDFKQFLTELQVQKADVHREHVRLTWPD
>DELTA20_P637782927 YP_388531 Dde_2039 transcription-repair coupling factor [Desulfovibrio desulfuricans G20]
RSGPATRARLAKELI-SVVLVARNADELAELRALATLFSSEDVSLTVPAWEIIPQHPAGPGRTAWAARMASLYALQAVIVSLDNFIPKLPPPSLFDKHQLVLSTGEDMSPGLVMEQAVEWGYTRTAYVTQPGEIALRGDILDIFPPGYAKPVRLDFFGDTLEEIRLFDPSSQRSKGNLAEVTLIPTAPVVLEGAGEARATLLPGVYYFLERWLPPDVYEALKEWSRTRRQTVLSFGSARSRAKFLSLAQQLVSARKGAELQWDNSVVLGEDVLQ--AFAGLKSYDDLEAGAMLVHRDYGVARFEGLLRMDL-GVSNDYLLLRYAGDDKLYLPVDRLSLVQRFKGPDGTAPSLDKLGGAGWSASKSKARKAIERIAHDLVEMYAWRKVAKGYRYSPVNDMYREFEASFGFEETPDQARAIEDVLDDMERAEPMDRLVCGDVGFGKTEVALRAAFRAAMDGKQVALLCPTTVLAEQHFQTFRSRLGQFPVNVGMLSRFVSRQRQKEVLAACERGQIDILIGTHRILSDDVILPNLSLLILDEEQRFGVRHKERLKKMRRNVDVLTLTATPIPRTLQLSMSGIRELSVIETAPPERKPVKTALIDRDPDILREVLLRELQREGQVFWVHNRVQGLERVAEYVRSLVPDARVGMAHGQMSEKALEETMHKFWHAELDVLVCTAIVESGLDFPRANTLVVDQAQMFGLGQLYQLRGRVGRSDRQAHAVFVVPDVDGVPELARKRLKIILEMDYLGAGFQVAMEDLRLRGAGNILGEVQSGHMVKIGLDMYLEMLEEEVARLKG-VQTELNIGITAHIPEGYMDDGRERLKYYKALSSAADGAAQESIELEMRDRFGHFPQELQAFLGILRLKRYLGTLDVQKADIFADKVRLTWAE
>DELTA20_P643538781 YP_002434710 DvMF_0285 transcription-repair coupling factor [Desulfovibrio vulgaris Miyazaki F]
RSGMGGAARLALALM-DVVMVVRDAAELAEARALTTLFSGTDPAVTQARWDVFPQHPAGRGRGAWAARMASLYALRGIIISVDNLLPKLPPVDIFEHHELRLARGEDMSPELVLDQAIDWGFERAQMVSRPGEAARRGDILDIFPPGYEKPLRLEFFGDTLEDIRLFDATSQRSLASLEEFRLLPVAPVVGCREEGEVTGLLPGAWYWMEDWLPRDVWTALRQWTSERRQVVLSFASDRSRRKFLKLAEQLVAPRAGIDLAWDNVLVIGEDVLQ--AFLGLDKYDDLSPGDLLVHRDYGVGRFGGLHRMDL-GVANDFLLLEYAGEDRLYLPVDRLSLIQRFKGGDDSVPSLDKLGGSGWRACKDKARKAIEKIAADLVQMYAYRKVAKGYRYGPLGELYREFEASFGFEETPDQARAIQDVLDDMEKPEPMDRLVCGDVGFGKTEVALRAAFRAAAEGRQVALLCPTTVLAEQHYQTFRSRLAGFPVNVGMLSRFVSRQKQKEVLQAAARGQIDILIGTHRLLSDDVQLPNLGLLVLDEEQRFGVRHKEKLKKFRKNVDALTLTATPIPRTLQLSMSGIRELSVIETAPPERKPVATALIERDQNALRQILEREIAREGQVFWVHNRVQGLERVAEFVRGLVPTARVGMAHGQMGERELEDTMHKFWHGELDVLVCTAIVESGLDFPRANTLIVDQAQMFGLGQLYQLRGRVGRSDRQAYAVFVVSDAERLPEQARQRMRIILELDYLGAGFQVAMEDLRLRGAGNILGEVQSGHMTRLGLDLYLEMLEEEVARLK-GVEPELNIGLAAHIPETYIGDARERLKFYKALSSAPDAATLQDVEMELRDRFGPCPPELRNFLAVLVLKRFLATLQVVRADIHPERLRLVWDE
>DELTA20_P637123135 YP_011120 DVU1903 transcription-repair coupling factor [Desulfovibrio vulgaris vulgaris Hildenborough]
RSGMATAARLGNAVL-SAVMVVRDAEELALARGLLTLFSAGDSPLVKPRWEVMPQHPLGRNRDAWASRMAALFALQGVLITVDNFLSKLPPADLFASHELTLACGDEMAPELVLEQAVDWGFDRVQMVSRPGEIAVRGDIVDIYPPGYERPLRLEFFGETLEEIRLFDASNQRSLGKLDEMVLLPVSPVVLSAEERHGEGLMPGAYYVVEEWLPRDAWAGLHRFVATHARVLLCFGNERGRRKFLKLAEQVVAPRAGVELAWDGTLVIGEDVLQ--AFRGLDKHEGLQPGDLLVHRDYGVARFVGLERMDL-GVGNDFLLLEYAGDDRLYLPVDRLSLVQRFKGADDTKPSLDRLGGGAWQSSKDKARKAIEKIAADLVEMYAYRKIAKGYTYGPIGELYREFEASFGFEETPDQARAIQDVLEDMDKPVPMDRLVCGDVGFGKTEVALRAAFRAASEGRQVALLCPTTVLAEQHYQTFRSRLAGFPVNVGMLSRFVSKQKQTEVLAAAAKGHVDILIGTHRLLSDDVRLPNLGLLVLDEEQRFGVRHKEKLKQFRRNVDALTLTATPIPRTLQLSMSGIRELSVIETAPPERKPVATALIERDDAALKSILEREIAREGQVFWVHNRVQGLERTTEYVRKLVPDARVGMAHGQMTERALEETMHRFWHGELDVLVCTAIVESGLDFPRANTLIVDQAQMFGLGQLYQLRGRVGRSDRQAYAIFVVPDADNLSDIARERMRVILDMDYLGAGFQVAMEDLRIRGAGNILGEAQSGHMTRVGLELFLEMLEEAVTRLKG-VETELNIGIPAHIPEGYIEDARDRLRFYKALSSATDAAAQQDIEMEMRDRYGVFPPELETFLALLVLKRQLRRMQVQRADIYPDKVRLVWDE
>DELTA20_P638022404 YP_629274 MXAN_1013 transcription-repair coupling factor [Myxococcus xanthus DK 1622]
GLKGAARGHVLARLHGPLVCVAVDEEAADALAADLSFFLGAPRVLRLPADEVLPYDEVSPDAAAVTERLGALFHLPALVLSVRALHRKVLPLAVMRALAARVAVGQDFDRDSLARRLVRMGYQNSPLVEDVGTFSVRGDLLDVFSPLYDKPVRLEFFGDTIESIRAFDPQSQRTVDALKEVDLVPAREVLLTDEPGFGMEGLLPGFFTVFDFLPEAVIERLERWRELRVACVVACGTLSQADRLKRLLMDLFTGEVSHGFVDPGLAVLADEEIFGALDAFGSGFGDLKEGDLIVHTDFGIGRYAGLTKMEVNGVPGDFLVLEYAGRDKIYLPVGRMRLIQKFSGGDPTQVQLDKLGTTSWEKTKKRVKEQLLKMAAELLQIAAARKAHPGHAFSAPDRYFAQFEADFEFEETPDQAKAIEDVLADMQKPEPMDRLVCGDVGYGKTEVAMRAAFKAALDRKQVAVLVPTTVLAQQHFLSFKKRFADYPVTVEVISGLKKAPEVREILKRAKEGKVDILIGTHKLLGGEVAFKELGLMIVDEEQRFGVKQKESLKKWRSQIDVLTLTATPIPRTLHMSMSGVRDMSIIATPPQDRRAIRTFVMKYEDTVVKEAIEREVARGGQVFFVHNRVESLPSIETQLRALVPQVSIGVAHGQMGEGQLEKVMLAFTEKKYQVLLCTSIIESGIDISSANTMIVNRADQFGLAQLYQLRGRVGRSKERAYAYLLVPSRRAVTKDAQRRLEVLQNFTELGAGFSIASHDLEIRGAGNLLGDKQSGAIAEIGFDMYAQLLEEAVAEM-QGIEPDVTLPMPALIPDDYVSDVHQRLVFYKRFSQASHPDEVTDLRAELVDRYGEAPDEVDHLSELTLLKIDMRDLRLRGLEVGTTRLVVTLGA
>DELTA20_P640846006 YP_001381640 Anae109_4478 transcription-repair coupling factor [Anaeromyxobacter sp. Fw109-5]
GLLGAARGLLARDLLASLLAVAPDEDDAEALARDLAFF-GPDAVLRLPADAVLPYDDLSPDRGVEMERLSALARLKAIVVSARALARRMVPRRVFEAGADLLGKGVSVEREALAAKLVLLGFTRTPLVEDPGTFAVRGGIVDLWSPADPAPVRLEFFGDEIESCRAFDPQSQRSEGEVAEVLLCPAREALFSEEPFFGLEALLPGFHTLFDYLPPGTARRLDDWRR-GVAAVVACGSASTVDRLRRLLEDVFTGEISAGFVDG-LAVVADEEIFGRENAFAAAFRDLNEGDLVVHVEHGIARYLGLTKMQI-RVEGDFLVLAYDGADRLYLPVAKLRQVQKFTGAAPESVRLDRLGGQSFALRKARVKEQLLKMAAELLDIYAARAAHPGHAFGEPDEIFREFEAEFPWEETPDQAKAIADVLRDMRKAAPMDRLVCGDVGYGKTEVAMRAAMLAVLSRKQVAVLVPTTVLASQHERTFRERFKGYPVRIEAISRMKSAEEVKQVLKDVAAGKVDVVVGTHRLLAADVSFKELGLVVVDEEQRFGVAHKERLKKLRRLVDVLTLTATPIPRTLHMSLAGVRDLSIIATPPEDRRAIRTFVMKFDPQVVRESIETELKRGGQVYFVHNRVRSIAAMQKFLADIVPSARVGVAHGQMAEGKLEEVMSRFVRKELDVLLATSIIESGLDIPSANTIIVNRADHFGLAQLYQIRGRVGRSRERAYAYLLVPARRPVTKDAQKRLEVLQRFSELGAGFKIASHDLEIRGAGNLLGKDQSGQIEAVGFELYSELLDEAVRELK-GIDPDVQLPVPAFIPDPYMPDVHQRLYFYKRLAQATTDEELDEVRAEIVDRCGDPPEELDALCDVMAVKVRLRALRIRALEAGPGRLVLTLG-
>DELTA20_P643597293 YP_002494870 A2cp1_4487 transcription-repair coupling factor [Anaeromyxobacter dehalogenans 2CP-1]
GLVGAARGLLIRDLLASVLAVAADEEEADALARDLAFF-GEGAVLRVPADAVLPYDDLSPDRGVEMERLAALARLKAVVVSARALARRTVPRRVFEAGSDLLGKGVEVDREALAAKLVLLGFARTPLVEDPGTFAVRGGIVDLWSPADPKPVRLEFFGDEIESCRAFDPSTQRSEGDVEEVLLCPSREALFTEEPFFGLEALLPGFHTLFDYLPAGAARRLEDWKR-GIAAVVAAGTASASERLRRLLEDVFAGEISAGFVDA-LAVVSDEEIFGRENAFAAAFRELNEGDLVVHVEHGIARYLGLTKMQI-RVEGDFLVLAYDGADRLYLPVAKLRQVQKFTGASPETIRLDKLGGSSFALRKARVKEQLLKMAAELLDIYAARAAHPGFAYPEPDQLFREFEAEFPWEETPDQAKAIEDVVRDMRKAAPMDRLVCGDVGYGKTEVAMRAAMLAVLAKKQVAVLVPTTVLAAQHERTFRERFKGYPVRIEAVSRMRTSDEVKHALKAAADGKVDILVGTHRLLAADVSFKDLGLVVVDEEQRFGVAHKERLKKLRRLVDVLTLTATPIPRTLHMSLAGVRDLSIIATPPEDRRAIRTFVMKFDPAAVKEAIETELKRGGQVFFVHNRVRSIHAMQRFLNELVPKARVGVAHGQMGEGKLEHVMTQFVDKELDVLLATSIIESGLDIPSANTIIVNRADHFGLAQLYQIRGRVGRSRERAYAYLLVPARRPVTKDAQKRLEVLQRFSELGAGFKIASHDLELRGAGNLLGKDQSGQIEAVGFELYQELLDEAVRELK-GIDPDVQLPVPAFIPDPYMPDVHQRLFFYKRLAQASTDEDLDEVRAEMVDRCGDPPDEVDALFEVMAVKVRLRALRIRALETGPGRLVLTLG-
>DELTA20_P642765934 YP_002136799 AnaeK_4468 transcription-repair coupling factor [Anaeromyxobacter sp K]
GLVGAARGLLIRDLLGSVLAVAADEEEADALARDLAFFLGEGAVLRVPADAVLPYDDLSPDRGVEMERLAALARLKAVVVSARALARRTVPRRVFEAGSDLLGKGVEVDREALAAKLVLLGFARTPLVEDPGTFAVRGGIVDLWSPADPKPVRLEFFGDEIESCRAFDPSTQRSEGDVEEVLLCPSREALFTEEPFFGLEALLPGFHTLFDYLPAG--RRLEDWRKRGIAAVVAAGTASASERLRRLLEDVFAGEISAGFVDAGLAVVSDEEIFGRENAFAAAFRELNEGDLVVHVEHGIARYLGLTKMQIRGVEGDFLVLAYDGADRLYLPVAKLRQVQKFTGASPETIRLDKLGGSSFALRKARVKEQLLKMAAELLDIYAARAAHPGFAYPEPDQLFREFEAEFPWEETPDQAKAIEDVVRDMRKAAPMDRLVCGDVGYGKTEVAMRAAMLAVLAKKQVAVLVPTTVLAAQHERTFRERFKGYPVRIEAVSRMRTADEVKQALKAAADGKVDIVVGTHRLLAADVSFKDLGLVVVDEEQRFGVAHKERLKKLRKLVDVLTLTATPIPRTLHMSLAGVRDLSIIATPPEDRRAIRTFVMKFDPAAVKEAIETELKRGGQVFFVHNRVRSIHAMQRFLNELVPKARVGVAHGQMGEGKLEHVMTQFVDKELDVLLATSIIESGLDIPSANTIIVNRADHFGLAQLYQIRGRVGRSRERAYAYLLVPARRPVTKDAQKRLEVLQRFSELGAGFKIASHDLELRGAGNLLGKDQSGQIEAVGFELYQELLDEAVRELK-GIDPDVQLPVPAFIPDPYMPDVHQRLFFYKRLAQASTDEDLDEVRAEMVDRCGDPPDEVDALFEVMAVKVRLRALRIRALETGPGRLVLTLG-
>DELTA20_P637749670 YP_355524 Pcar_0091 transcription-repair coupling factor [Pelobacter carbinolicus DSM 2380]
GMTGTSCAFVLARLLAPLLILAASQEQAVRITADLGFYLQ---VFYLPHWEMRPYEALLPHPAIEATRLATLAALRALVMTVRSVMQRVMPRRVLAGLRSCLREQELHPREALLPHLAELGYHAVPLVEDPGTFSVRGDLLDLYPPTLPEPVRIEFFGDQIERMRPFDPTTQRSRHHIASLELLPAREMILAGELGPGHSFFMPLCYTIFDYVTGGRLSRLHGWQKQNWRLLLVCHQQGQAERLQALLAGITLGELSSGFRLPDLAIITEEEIFGRAKARLSSLAELREGDLVVHADHGIGRYQGLQHLQLQGNEGDFLNLEYAGKDRLYLPVERIEKIQKYVGAEGAMPRLDRMGGGAWEKAKLKARAAVEELARELLQIYARREMHEGFHYSPPDAMFREFEAAFPYEETADQMAAINDVLTDMQTPRAMDRVICGDVGYGKTEVAIRAAYKAALDGKQVAVLVPTTILARQHGQTFAERLKDTPVTVASLSRLNSSAEQKQILQQAADGKIDILIGTHRLLQRDVRFKDLGLLIVDEEQRFGVTHKERLKKLRAEVDLLTLTATPIPRTLHMSLLGLRDLSVIDTPPVDRQVIRTYVSRFDDDLIRQAILNELRRGGQVFFVHNRVQNIGAMAEFIQSLVPEATVAVGHGQMTEKALEAVMMDFVEGKTNVLVCSTIIENGLDIPRANTIIVNRADCFGLAQLYQLRGRVGRSHLRAYAYLLIPGESTLTHEARERLRVLTELTELGAGFRIASHDLELRGAGDLLGPKQSGQIAAIGFEMYAELLEDTIAELK-GIDPEIRLGLSAFLPEKYLPDPNQRLVFYKQLASAEDEETLYDLADELRDRFGDPPDPTLLLMEVMKLRVLMKRLRIATADYDGHSLTFGFAQ
>DELTA20_P642676092 YP_001950946 Glov_0700 transcription-repair coupling factor [Geobacter lovleyi SZ]
GLAGSAPALAVAELSRQIVVIAADQAAADELTRELLFFN-AVNVSPFPAWDTCPFEAASPHPDISGARLETLQRLCTVVAPVAALMQRIIPRSLLTGASCAIKPGDEPDREALLEGLVRMGYTNCPLVEERGSFAVRGGILDIFPPSLPRPVRIEFFGDTVETLRSFDPLNQRSLESLTCLNLLPSRELILSPAYPPGVEFLQPLFHSFFAYLNNPLLERLKQWHAANWRTLVVCHHPSQAERLQELLTPLVIGELSRGFRLPELAVIAEEELFGKTKQILASLAELKPGDAMVHVDHGIGIYRGLQHLKT-GVEGDFLLLEYAGNDKLYLPIDRLGLVQRYAGGEGATPAPARLGGPGWEKTRSKARKNIEELAAELLEVYAKRQASQGYSFSPPDELFREFEATFPWEETPDQLSAIQDVLGDMQHSRPMDRLVCGDVGYGKTEVALRAAFKAVLDGKQVALLVPTTILAQQHFETFSTRLKDYPVSIEMLSRFRSVKEQKISLERLKEGKLDIIIGTHRLLQKDVSFKDLGLLIVDEEQRFGVKDKERLKQYRASVDIMTLTATPIPRTLHLSMLGIRDLSIIDTPPVDRQAIKTVVARDTDDLIRDAITRELERGGQVFYVHNRAHSIGIVAERLRQLVPQARISVAHGQMEEKELEKVMLTFMHGQSDLLLTTTIIESGLDIPRANTMLVDRADTFGLSQLYQLRGRIGRSTVKSYAYLLIPGQGSITQDARERLKIIQDISELGAGFRIATHDLELRGAGDMLGPRQSGTVADIGFELYTQMLEEAIAGLK-GCEPEINLAIAAFIPETYIPDTNQRLVLYKRLVQADSNDDVAEVVSEMHDRYGRPPLAAQTLARIMELRIRLKQLKILKVDADGKRLCLAFHP
>DELTA20_P639754536 YP_900188 Ppro_0499 transcription-repair coupling factor [Pelobacter propionicus DSM 2379]
GLKGSSPACILADILATLLVLTPDQAAADEFLRELTFFAA---PLSFPAWDMAPFSATSPHPDISGARLDTLFRLRAVVMPVAAALQRVLGRGLFSESSCYLVSGEEFERDELLGRLVKMGYANVPLVEDRGTFAVRGGILDIFPPNLSAPVRIEFFGDTAETIRTFDPLTQRSLHPLEELVLLPSREIILTDGYFRGVEYLQPLLHTIFDYAPDASLRSLRQWLDSGFRVLIACHQNAQAERLRELLTPLLQGDLSRGFRLLELVLIAEEELFGKKKQILSSLAELKPGDHMVHVDHGIGLYRGLQHISVSG--GDFLLLEYNGGDKLYLPVDRLALVQRYVGPEGSSPSLDKLGGVSWEKSKGKARKAIEELAGELLEIYAKRQICEGFSFSPPDEMYREFEASFAWEETPDQLSAINDVLADMQHSRPMDRLVCGDVGYGKTEVALRGAFKAALDGKQVGVLVPTTILAQQHFETFHERLKEYPVRVEALSRFRTPKEQKAILERLKKGEIDIVIGTHRLLQKDVAFKDLGLLIIDEEQRFGVKDKERLKAFRAVVDVMTLTATPIPRTLYMSMMGIRDLSIIDTPPVDRLAVKTIVARFSEELVREAIMRELRRGGQVFFVHNRVQTIAKRAELIAALVPEAKIAVGHGQMGEQELEKVMLGFMHGETNLLICTTIIESGLDIPNANTLIVDHADRFGLSQLYQLRGRVGRSSQRGYAYLLIPGEGSLTSDARERLKILQDISELGAGFRIATHDMEIRGAGDMLGSRQSGTVIEIGFELYNQMLEETICRMR-GVEPEINLKVPAFIPETYVRDTGQRLVIYKKLTQAESEEDVLDVQNEVSDRFGKYPLATAYLFETMKLRIMLKKLLVRQIDYDGKDVVISFHP
>DELTA20_P637780836 YP_386477 Gmet_3547 Transcription-repair coupling factor [Geobacter metallireducens GS-15]
GLKGSAPAYLLAQLLKPLLVIAPDADRAAEICTELRFFSD---VLSFPAWDVAPFEKGSPHADVTGQRLACLRRLAAVVTTPDALRQRVLPRTMLDNASLYFLPGEESNRDEFLAKLVTLGYLNVPLVEDRGTFAVRGGIVDIFPPGFEQPVRIEFFGDFVETIRAFDPLSQRSLAPLEELLLLPSREMVLTDEYPTGVEWLLPLFHTLFDYAGDAVRTRLNGWLEERQRVIVACHQRGQAQRLYELLSHVVIGDLSRGFRLPELIVIAEEEIFGRKKQIMTSLAELKPGDYMVHLDHGIGIYRGLQHISLSGCAGDFILLEYAGGDKLYLPVDRLNLVQRYVGAEGLEPRVDKLGGTSWEKAKGKARAAVQEMAGELLQIYAARQLHEGHAFSPPDDLYREFEASFAYEETSDQMSAIMDVIGDMTSAKPMDRLVCGDVGYGKTEVAMRGAFKAVMDGKQVAVLVPTTVLAQQHLETFKARLGAYPVTVEMLSRFRTPKEQKEILEKVKKGAIDVIIGTHRLLQSDVTFKDLGLLIVDEEQRFGVTHKEKLKKYKAVVDILTLTATPIPRTLYMSMMGIRDLSIIDTPPVDRLAVKTFVARSSDDLIREAVMRELRRGGQIFFVHNRVQSIMNWAEHLRRIVPEAKIAVGHGQMDEGELEKVMLGFMHGETNLLLCTTIIESGLDIPNANTLIIDRADTFGLAQLYQLRGRVGRSKQRAYAYLLIPGEGAISSDARERLKIIQELTELGAGFRLATHDLEIRGAGDILGAKQSGNIAAVGFDLYTELLEEAIQNLK--VEPEINLRIPAFVPEDYVREPNQRLIIYKKLTQAESEEEVDEVMAELVDRFGKLPLAATYLLEVMKLRIHFKRFLITMAEFDGRRLCLSFHQ
>DELTA20_P637124679 NP_951079 GSU0017 transcription-repair coupling factor [Geobacter sulfurreducens PCA]
GLRGSSPAYLLARLIGPFLVVVPDAEAAAELTTELRFFTD---ILLFPAWDTSPFEKASPHADVTAQRLAVLRRLAAVVTTPEALRQRVVPRSLLDSASLYFLPGEESDRDDLLSRLVTLGYLNVPLVEDRGTFAVRGGIVDIFPPGFDLPVRIEFFGDFVDTIRSFEPLSQRSLQPLEELLLLPSRELLLTADYPAGVEWLLPLFHTLLDYAGDAVRARLTGWIEERQRVIIACHQRGQAQRLYELLAHIVIGEISRGFRLPELVVIAEEEIFGKKKQIMTSLAELKPGDHMVHLDHGVGIYRGLQHLSLSGCAGDFLLLEYAGGDKLYLPVDRLSLVQRYVGSEGIEPRVDRLGGTSWEKAKGKARAAVQEMAEELLRIYAARQLHEGHRFSPPDDLYREFEASFAYEETSDQLAAIEDVIADMTSNRPMDRLVCGDVGYGKTEVAMRGAFKAVMDGKQVAVLVPTTVLAQQHLETFRARLGAYPVTIEMVSRFRTPKEQKDILERVKKGTVDVIIGTHRLLQNDVTFKDLGLLIVDEEQRFGVTHKEKLKKYKAAVDILTLTATPIPRTLYMSLMGIRDLSIIDTPPVDRLAVKTFVARTSDELIREAVLRELRRGGQVFFVHNRVQSIGAWYEHLRRIVPEAKIAVGHGQMDEGELEKVMLGFMHGETNLLLCTTIIESGLDIPSANTLIVDRADTFGLAQLYQLRGRVGRSRQRAYAYLLIPGEGAISSDARERLRIIQELNELGAGFRLATHDLEIRGAGDLLGAKQSGNIAAVGFDLYTELLEEAVQKLK-GVEPEINLRVPAFIPEDYVREPNQRLVIYKKLTQATAEEEVGEVMEELVDRFGTLPLAASYLLDVMKLRIMLKHFLVRMAEFDGKRLCLSFHE
>DELTA20_P642766181 YP_002137041 Gbem_0214 transcription-repair coupling factor [Geobacter bemidjiensis Bem]
GVDGSAPAYLLSRLMTPLVVITSDQESADELARELRFFSA---VLPFPGWDVTPFEAASPHPDLVGERLNALLRLRAVVVPLAAALQRVIPRETLGGVCQYLVAGEELERETLVEKLVKLGYSHVPIVEDRGSFSVRGGILDIFPPDQERPVRIEFFGDLVETMRLFDPATQRSLEPLDELVLLPSREVILSEGYPPGVDFLQPLFHTLFDYAGPGTREKMVTWIAAGNRVLVPCHQAGQARRLYELLSHILTGEISRGFRLEELVVVAEEEIFGKKQQLLTSLAELKPGDHMVHVDFGVAIYRGLQHLSLTGLEGDFLLLEYAGGDKLYLPVDRINLVQRYVGAEGIEPRLDRLGAAGWEKAKAKARAEVQEMAAELLKIHAAREVQQGFKFSPADDMYRAFEASFAFEETPDQAQAIDQVIADMESPRPMDRLVCGDVGYGKTEVAMRAAFKSTLDGKQVAILVPTTVLAQQHAESFASRLKDYPVRVEMLSRFRTPQQQKQILEGVKKGEVDIVIGTHRLLQKDVVFKDLGLLIVDEEQRFGVAHKERLKQFRAVVDILTLTATPIPRTLYMSLMGIRDLSIIDTPPVDRLAIKTFVSRSSDELIREAVLRELRRGGQVFFVHNRVQTIGAMAEELKRIVPEAKIAVGHGQMAEKELEQVMLSFMHGETNLLLCTTIIESGLDIPTANTLIVNRADTFGLSQLYQLRGRVGRSKSRAYAYLLIPGEGAISPEARERLKILQELTELGAGFRIATHDLELRGAGDLLGARQSGDIAAVGFELYTELLDEAVRTLK-GVEPEIKLKVPAFIPEDYVRDPNQRLMIYKKLTQPTDEAEIDDIRAELADRFGQLPMAAVYLLEVMRLRVTLKRLLVKEIELAGNELVLSFHE
>DELTA20_P643641028 YP_002539151 Geob_3711 transcription-repair coupling factor [Geobacter sp. FRC-32]
GLKGSAPAYILSRLWDLLFIITPDADTAEELYREMRFYSR---VLYFPPWDTAPFDTASPHADIVGQRLNVLFRMGAVIVPLPALMQKVLPRKTLGQISQYIVAGEEVERDLLLEKLVKLGYSHVPLVEDRGGFSIRGGILDIFPPDLPTPVRIEFFGDFVDTIRTFDPVTQRSLQPLQELILLPSREVVISEEYPPGVEYLQPLFHSLFDYCGEDFLEKLLARQAEQKHVLMICHQRNQAQRLYEMLSHIMVGDISRGFQLAELVIIAEEEIFGVRKQLLTSLAELKPGDYMVHIDFGVGIYRGLQHL-TSGMEGDFLLLEYAGADKLYLPVDRINLVQRYVGAEGVEPHVDKLGGAGWEKTKAKARAAIQEMAGELLKIYAARQVEEGHAFSPPDELYQEFEAAFAYEETPDQQAAIEDVLLDMESKKPMDRLICGDVGYGKTEVALRGAFKAVMDGKQVAVLVPTTVLAQQHLETFSARLKSYPVKVEMLSRFRTPKEQKEIIEGVKNGTVDVVIGTHRLLQKDIVFKDLGLLIIDEEQRFGVTHKERLKKYRAVVDIMTLTATPIPRTLYMSLMGIRDLSIIDTPPVDRLAIKTFVARTSDDLIREAVLRELRRGGQIFFVHNRVQTIGAMAEHLQRIVPEAKIAVGHGQMEEKELERVMLSFMHGESNLLLCTTIIESGLDIPTANTLIVNRADTFGLSQLYQLRGRVGRSKQRAYAYLLIPGEGAISADARERLKIIQELTELGAGFRIATHDLEIRGAGDLLGARQSGDIAAVGFELYTELLEEAIRQLK-GVEPEIKLRIPAFIPEDYVREPNQRLIIYKRLTQATSEEDVAEIMGELVDRFGKLPLAALYLVEVMKLRVALKAMLVKEIEFDGKKLVLSFHQ
>DELTA20_P640547639 YP_001228929 Gura_0140 transcription-repair coupling factor [Geobacter uraniumreducens Rf4]
GLKGSAPAYVLSRLLVNFLIITSDAESAEELCRELRFYSA---VLYFPPWDTAPFESASPHADITGQRLNVLFRLDAVVTSLPAVMQKLLPRKTLGEISQYIVAGEEVAREKLLEKLVKLGYSHVPLVEDRGGFSIRGGILDIFPPDLPAPVRIEFFGDFVDTIRTFDPATQRSLQPLEELVLLPSREVVISEEYPPGVEYLQPLFHTLFDYAGKELVEKVLSWLAAKNQVLMACHQRGQAQRLYEILSHILVGDISRGFRLPELVVIAEEEIFGVKKQLLTSLAELKPGDYMVHIDFGVGIYRGLQHLTFRE--GDFLLLEYAGADKLYLPVDRINLVQRYVGAEGVEPHVDKLGGAGWEKTKARARAAIQEMAGELLKIYAARQVEEGHAFSPQDELYQEFEASFAFEETPDQQAAIEDVLHDMESKRPMDRLVCGDVGYGKTEVAMRGAFKAVMDGKQVALLVPTTILAQQHMETFAERFKAYPVKVEMLSRFRSAKEQKAILEGVKKGEVDIIIGTHRLLQKDVVFKDLGLLIIDEEQRFGVSHKERLKQFRAVVDIMTLTATPIPRTLYMSLMGIRDLSIIDTPPVDRLAIKTFVARSSDELIREAVLRELRRGGQVFFVHNRVQTIGAMAEHLQQIVPEARIAVGHGQMDEKELERVMLGFMHGETNLLLCTTIIESGLDIPTANTLIVSRADTFGLSQLYQLRGRVGRSKQRAYAYLLIPGEGAISADARERLKIIQELTELGAGFRIATHDLEIRGAGDLLGARQSGDIAAVGFELYTELLEEAIRQLK-GVEPEIKLRIPAFVPEDYVREPNQRLIIYKKLSQATSEEDIGEIMAELVDRFGKLPLAATYLLEVMRLRVTLKAMLVKEIEFDGKRLVLSFH-
>GAMMA2_P640525266 YP_001209598 DNO_0689 transcription-repair coupling factor [Dichelobacter nodosus VCS1703A]
TMTEKFKHLALAHHLLVHLIVAPDAVWAQYLYDNLMFWLWQQTLYYFSDWETLPYDHYTPHPDLVSERIRVLAELGIVITSTSAFRQRLCPQTHLDKFGIHCAVGDHIAQKTVINRLLQAGYQSTHFISEKGEYATRGNIVDLFPMAAQTPIRLEWLDDEIDSIRFFDLKTQLTLKKCQQLSILPARELDLSDATPQGLEYYLPLFFHLLDYFPSNTCEQFATA-----RAVLHFSSQGLREYWFDRLYQLCISPLQYSFCADGITHLAETDRHGSAGAIIQSLQDLTLGAPVVHIDHGVGRYRGLEMIDD-D---EMLVIEYAKGARLFVAISDLDLISKYSGTASENAPLHELGGKVWQNAKKKAQQTARDTAAELLAIYAAREAASAQALTFDPHMLADFAQQFEYETTPDQQAAIDAVLNDLQQAKPMDRIVCGDVGFGKTEVAMRAAYAAVLAGYQCAIITPTTLLADQHVHNFLDRFSHIAVRIAAISRFKTPAEQRAIVQSLRDGTIDIVIGTHRLLQKDIAFARLGLVIVDEEHRFGVKHKEALKSLRADVNLLTLTATPIPRTLNLALSGLRDLSIIATAPAGRQSIQTIISQYDPIVIEEACERELNRGGQIYFLHNDVSSIDRIARALSEQLPQARIAVAHGQLRERALEKIMQDFYNRHYDLLVASTIIESGIDIPNANTIIINRADKLGLAQLHQLRGRVGRSHHQAYAYLITPAWQTLNKDAQRRLSAFTELDSLGAGFLLASQDLEIRGAGEILGDEQSGQIQQIGMSYYLDLLERATAALKSGVRYQIDIGEAALLPDTYVFDPQIRLTLYHRLARAKSIAEIDDVMIELSDRFGSLPVLAQNLCHKARLHVYAQLIGIEKIRLQTKTIELQFLP
>GAMMA2_P641556993 YP_001678278 Fphi_1551 transcription-repair coupling factor [Francisella philomiragia philomiragia ATCC 25017]
NAYGSSFSILFNEYLKFNLIVAEDSQQAHRVYDELKYL-K-DSVFYFPNLEILPYDRFSAAIDIISRRQEILHKLTLVITSISNTLRKLPPAKFIKEHSFILKTGDSLDITKQKVLLTEAGYTLVNNVFEKGEFSIRGSIIDIFPVGSKVAFRIDLFDDEVDTIKELDTETQRSGKEIKSINIMPSHELIYNSQYFSGIEFYLPLFYSLFDYLPKSANRDLQKLDS-SNKVIFSTDSNGRGEILLEHLNKLIISPFQEGVIIDKIILITESDLFPE----LKDLTDLKPGMHVVHIDHGIGRYEGLESIEL-NKKDEFILLRYANDAKIYVPITSLNLISIYNSSITEKIALNKLGSDKWKKQKEKTIKKIIDVAANLLEIYAKREMRQGFSNSLDEEEYLRFCADFPYEETPDQLLAINDVFKDMISAKPMDRLICGDVGFGKTEIAMRAAFLATQNQKQVAILVPTTILAQQHYNSFKDRFANTAVNIEVITRSKTAKAQEELFDNLKKGTVDIIIGTHKLISSKIDFNNLGLLIIDEEHRFGVAQKEKLKALKAEIDILTMSATPIPRSLSMAFSALRDLSIIASPPAKRLSVKTFVKEYDNNIIREAVSRETIRGGQIFYLYNKVDTIQKKKEILQELFPRLRIAIAHGQMSEKEIQKIMFDFKHNKYHILLCTTIIETGIDIPNANTLIIEDANNLGLAQLHQLRGRVGRSHHQAYAYMLVPSEGSITKDATKRLEAIGSTDSLGGGFTLANHDLEIRGAGEILGQEQSGNIDGIGLNLYMDLLDKTIANLKAGTVCEVELNIPTLIPDYYISDVNTRLNIYKRISKA-DHKELVNIKIELIDRFGRLPVEVLYLLKVAHIKIDAINLGIGQIKMFATSGKINFAN
>GAMMA2_P640891026 YP_001428399 FTA_0967 transcription-repair coupling factor [Francisella tularensis holarctica FTA]
NAYGSAFSILFNEYLKFNLIVTEDSQQAHKIYKELKYLNKVD-ILFFPNLEILPYDRFSASIDIISRRQEILYKMTLIITSISNTLRKIAPASFIQEHSFILKTGDNLDITKYKMLLTEAGYTLVNNVFEKGEFSIRGSIIDIYPIGSKVAFRIDLFDNEIDSIKELNTESQRSGNQIQSINIMPSHELVYNNQYFSGIEFYLPLFYSLYDYLPPSTNKDLQQFIDKSNKVIFSTDSNGRAELLLEHLNKLIISPFQEGMIIDKIALITEADLFPEPTVDLKDLTDLKPGMHVVHIDHGIGRYEGLESIELNGKKDEFILLRYANDAKIYVPITSLNLISIYNSSLTEKIALNKLGTDKWKKQKEKTIKKIIDVAANLLEIYAKREMRQGFSNSLNEEEYLRFCADFPYEETPDQLSAINDVFKDMISAKPMDRLICGDVGFGKTEITMRAAFLATQNQKQVAILVPTTILAQQHYNSFKDRFTNTAINIEVITRSKTSKAQQQLFEDLKKGTVDIIIGTHKLISSKIDFKNLGLLIIDEEHRFGVAQKEKLKSLKAEIDILTMSATPIPRSLSMAFSALRDLSIIASPPAKRLSVKTFVKEYDNNIIREAVSRETIRGGQIFYLYNKVETIQKKKEILQELFPRLRIAIAHGQMSEKEIQKVMFDFKHNKYHILLCTTIIETGIDIPNANTLIIEDANNLGLAQLHQLRGRVGRSHHQAYAYMLIPNKASITKDALKRLEAISNTESLGGGFTLANHDLEIRGAGEILGEEQSGNIDGIGLNLYMDLLDKTIANLRAGTVCEVELNIPTLIPDYYIYDVNTRLNIYKRISKASH-QDLVNIKIELIDRFSKLPLEVLYLLKVAHIKIDAIALGISQIKMFATSGKISFSN
>GAMMA2_P638060081 YP_666794 FTF0644c Transcription-repair coupling factor,ATP-dependent [Francisella tularensis tularensis FSC 198]
NAYGSAFSILFNEYLKFNLIVTEDSQQAHKIYKELKYLNKVD-ILFFPNLEILPYDRFSASIDIISRRQEILYKMTLIITSISNTLRKIAPASFIQKHSFILKTGDNLDITKYKMLLTEAGYTLVNNVFEKGEFSIRGSIIDIYPIGSKVAFRIDLFDNEIDSIKELNTESQRSGNQIQSINIMPSHELVYNNQYFSGIEFYLPLFYSLYDYLPPSTNKDLQQFIDKSNKVIFSTDSNGRAELLLEHLNKLIISPFQEGMIIDKIALITEADLFPEPTVDLKDLTDLKPGMHVVHIDHGIGRYEGLESIELNGKKDEFILLRYANDAKIYVPITSLNLISIYNSSLTEKIALNKLGTDKWKKQKEKTIKKIIDVAANLLEIYAKREMRQGFSNSLDEEEYLRFCADFPYEETPDQLSAINDVFKDMISAKPMDRLICGDVGFGKTEIAMRAAFLATQNQKQVAILVPTTILAQQHYNSFKDRFTNTAFNIEVITRSKTPKAQQQLFEDLKKGTIDIIIGTHKLISSKIDFKNLGLLIIDEEHRFGVAQKEKLKSLKAEIDILTMSATPIPRSLSMAFSALRDLSIIASPPAKRLSVKTFVKEYDNNIIREAVSRETIRGGQIFYLYNKVETIQKKKEILQELFPRLRIAIAHGQMSEKEIQKVMFDFKHNKYHILLCTTIIETGIDIPNANTLIIEDANNLGLAQLHQLRGRVGRSHHQAYAYMLIPNEASITKDALKRLEAISNTESLGGGFTLANHDLEIRGAGEILGEEQSGNIDGIGLNLYMDLLDKTIANLRAGTVCEVELNIPTLIPDYYIYDVNTRLNIYKRISKASH-QDLVNIKIELIDRFGKLPLEVLYLLKVAHIKIDAIALGISQIKMFATSGKISFSN
>GAMMA2_P639758645 YP_904197 Rmag_1021 transcription-repair coupling factor [Candidatus Ruthia magnifica Cm]
SLYGSADALALIEFTNVILVITDDTGHFDNLYKSLNFY-TNLEILKFDSWEVLAYDHFSPHPDITSSRLKTLSKLGIIITTLESLFSYLCPLEFSEKYSFNININDNINIKAFSKKLLKIGYNRVTTVMEHGEFNIHGSLIDLYPMGAKTPYRIDLFDQEVESIRTFDTSTQRSKMEVSKIMLLPAREFATDSTLPSGIEFYLPLFFTLFDYLVDNAIRKFLAFKK-NKKILVVCESRSRQNVLRDLFTSITNENLTNGLLTDDIAIITEENLFGQFDEAIKSLVEIKMGDAIVHENYGVGRYLGLKPQIF-DQSQDFLTLEYADNAKLMVPITSLNLISRYAGISSENAPLHKLGTNQWSKAKKKAGEALFDVAAELLEIYAKRASKISFAFPKPNDAYSSFVASFPFEETPDQLKTMDEVLADMQSCRPMDRLVCGDVGFGKTEIAMRAAFLAVEAGKQVAILVPTTLLSNQHYQSFVDRFINHPVEIAALSRFQTQKEKKLIIKKLNQGTIDIIIGTHTIIQSTIKYKDLGLIIIDEEHRFGVKQKEALKKIRGESDILTMTATPIPRTLNMALGSLRELSIIATPPAKRSAIQTFVQEWNNNNIKEAITREMHRGGQVFVLHNDIDSIDKMVENLKQIMPKIHVRIAHGQMPTRELKKIMSDFYHARFQILVCTTIIETGIDIPNANTIIINNAQNFGLAQLHQLRGRVGRSHHRAYAYLIIKSYQLLSKTAKKRLDVIESLEELGAGFILANHDLEIRGAGDLLGDNQSGKINEIGFNLYHDLLKRTIDTLRSGHEVKIDSGLPSIIPETYIFDVHQRLVLYKRIASCQNNKELKALQIEMIDRFGLLPDSTKNLFANTKLKLFSQKIGIDKISLYENKAIITFGN
>GAMMA2_P640538386 YP_001219745 COSY_0922 transcription-repair coupling factor [Candidatus Vesicomyosocius okutanii HA]
SLYGSADALALIEFANIILVIANDIVHFDNFYKSLKFY-TDLEILKFDNWEVLAYDYFSPHPDITSSRLKTLSKLGIVITTLESLFSHLCPLEFSKKYSLNIRINDKINPDTFSEKLLKIGYKHVITVMEHGEFNMRNSLIDLYPMGTKTAYRINLFNQKVESIRAFNTSTQRSKTKIPEITLLPAREFATDNTLPGGIEFYLPLFFTLFDYLADNTISKFSTFKRQNKKILIVCESLDRQNVLSDLLINIIHEDLIHGLLIHNIAIITEEDLFGQFDVAIKSLVEIKIGDAIVHENYGVGRYLGLKTKIF-DQSQDFLVLKYANNAKLMVPIISFNLISRYAGISLKSTPLHKLGTNQWAKAKKKAGEALFDIAVELLKISAKRSSQTGFSFPKPNDDYSSFVANFPFEETPDQIKTMNEVLADMQSQQPMDRLVCGDVGFGKTEIAMRAAFLAVKAGKQVAILVPTTLLSNQHYRSFIDRFTNDPTKIATLSRFQTPKEQKIIIEQLKQGTIDIIIGTHKIIQNNIKYKNLSLIIIDEEHRFGVKQKEALKKLRGQSDILTMTATPIPRTLNMALGSLRELSIIATPPAKRSTIQTFVQEWHNDNIKEAITREIHRGGQVFILHNDINSIDNMAENLKQIIPKLQIRIAHGKIPTRELEQIMSDFYHARFHILVCTTIIETGIDIPNANTIIINNAQNFGLAQLHQLRGRVGRSHHRAYAYLIVKSHLSLSKTAKDRLDVIKSLTELGSGFMLANHDLEIRGAGDLLGDNQSGQISEIGFNLYHDLLKRTIDAVYSGHEVQIDSGLPSIIPETYIFDVHERLVLYKRIANCQNNNELKALQIEMIDRFGLLPDSTKNLLYNTKLKLFSQIIGVNKIILYEDKAIITFNK
>GAMMA2_P643528781 YP_002424872 AFE_0369 transcription-repair coupling factor [Acidithiobacillus ferrooxidans ATCC 23270]
QIYGAADSWLAAQMTRPLLILLPNARDVEEWQREWRFFAA---PLVFPDREILPYDRLAPPADATATRLATLATLGVCLAPLSAVLQRLPPRSFLDQHAFVLAVGDHLSPEGFRQRLIDAGYRNVSEVSEAGELAWRGGIIDLFPSGSPLPYRIELFDRVVESIRAFDPETQRTLQKVEGVSLLPAREVPVDTAAPQGAEHYLPLFFHLLMHFPVDGVASLDTFLRTTGRVILAAESPGRQEALSERLGKITVAPLERGLLIKELALVSEAQIFGDIEGLVRDLGELQPGDAVTHEEYGIGRFQGMA--TPAGDINEYVVLEYANGDLVYVPADHLDRIARYVGNGATEPVLSRLGSNHWEKVKAKARQKAVDAASELLDIYARRAARTGRAFPEPDDAYWEFVSRFPFEETPDQQQAIDAVIADMTSPHPMDRLVCGDVGFGKTEVALRAAFLAAHSGAQVAVLVPTTLLAQQHYENFRNRCAGLPLRVEVLSRFQNAKTHKQVLTAVSVGEVDILIGTHRLLQKDVAFHDLGLLILDEEHRFGVRQKERIKALRAEVDILTLTATPIPRTLNLSLAGLRDLSIIATPPQRRQPVRTFVQIWDDATVIEACQRELHRGGQVYFLHNEVRDIERMAATLRRLLPEARLRVAHGQMPEGELEAVMLDFYHQRFDILLCTTIIESGIDNPHANTILINRADKFGLAQLHQLRGRVGRSHQRAYAYLFTPDLRAMSDDARRRLDAIQSLEDLGVGFALASHDLEIRGAGELLGEEQSGHMDEVGFTLFMEWLDDAVEAIRAGSGPEIHLNTPALIPDDYLPDVHLRLQLYKRLSDVRSDTAIGEIMVEMIDRFGPIPAPARTLLCQTRLRLVAIQTGIEQIDAGPAGARLQFAA
>GAMMA2_P642788416 YP_002219000 Lferr_0539 transcription-repair coupling factor [Leptospirillum ferrooxidans ATCC 53993]
-------------MTRPLLILLPNARDVEEWQREWRFFAA---PLVFPDREILPYDRLAPPADATATRLATLATLGVCLAPLSAVLQRLPPRSFLDQHAFVLAVGDHLSPEGFRQRLIDAGYRNVSEVSEAGELAWRGGIIDLFPSGSPLPYRIELFDRVVESIRAFDPETQRTLQKVEGVSLLPAREVPVDTAAPQGAEHYLPLFFHLLMHFPVDGVASLDTFLRTTGRVILAAESPGRQEALSERLGKITVAPLERGLLIKELALVSEAQIFGDIEGLVRDLGELQPGDAVTHEEYGIGRFQGMA--TPAGDINEYVVLEYANGDLVYVPADHLDRIARYVGNGATEPVLSRLGSNHWEKVKAKARQKAVDAASELLDIYARRAARTGRAFPEPDDAYWEFVSRFPFEETPDQQQAIDAVIADMTSPHPMDRLVCGDVGFGKTEVALRAAFLAAHSGAQVAVLVPTTLLAQQHYENFRNRCAGLPLRVEVLSRFQNAKTHKQVLTAVSVGEVDILIGTHRLLQKDVAFHDLGLLILDEEHRFGVRQKERIKALRAEVDILTLTATPIPRTLNLSLAGLRDLSIIATPPQRRQPVRTFVQIWDDATVIEACQRELHRGGQVYFLHNEVRDIERMAATLRRLLPEARLRVAHGQMPEGELEAVMLDFYHQRFDILLCTTIIESGIDNPHANTILINRADKFGLAQLHQLRGRVGRSHQRAYAYLFTPDLRAMSDDARRRLDAIQSLEDLGVGFALASHDLEIRGAGELLGEEQSGHMDEVGFTLFMEWLDDAVEAIRAGSGPEIHLNTPALIPDDYLPDVHLRLQLYKRLSDVRSDTAIGEIMVEMIDRFGPIPAPARTLLCQTRLRLVAIQTGIEQIDAGPAGARLQFAA
>GAMMA2_P637517932 YP_046083 ACIAD1395 transcription-repair coupling protein [Acinetobacter sp. ADP1]
SLFGSSGALLFKEIVQLLVIVTQNSQHLAQLESELEFY--GVKPTIFPDWEILPYDRLSPHQDIVSERLAILSNMGVLLISASTLAQRVAPIGWVLGEHFDIQVGQKLDLEKEKLRLIQAGYHLVDTVYDHGEFAVRGSIMDIYASGQEQPIRIDLFDDEIDTLKFFDPETQRTTENLKQFRILPAKEFPL-KEASPGVEFYLPLFFYFTAYLPRNCIEVVTKYINVNHPVLLVAESAGRRESLKDALRPITNAPLDRGLVLSSLAVISENQLYEHEEFLIRSLTELSIGAPVVHIDYGVGRYAGLITLEI-DQDHEFLQLDYADAAKVYVPVTNLHLISRYSGGDPDLAPLHKLGTDAWSKAKRKALEQIHDVAAELLHIQARRQSKPGFAFELDQSPYMQFSSGFAYEETLDQANAIEATLHDMQLAKPMDRLVCGDVGFGKTEVAMRAAFLAVQNNKQVAVLVPTTLLAQQHYESFKDRFADWPIRIEVLSRFGSNKTHQKNIEDLQTGKVDIVVGTHKLLQETVQFHDLGLMIVDEEHRFGVRDKERIKAMRADVDMLTLTATPIPRTLNMAFSGMRDLSIIATPPARRLAVKTFVQEHTDDSVREAILRELLRGGQVYFLHNEVDSIERTAENIRNLVPEARVAVAHGQMRERELEQVMQQFYHKEYNVLVCSTIIETGIDVPNANTIIMERADKLGLAQLHQLRGRVGRSHHQAYAYLLVPSIKHLKGDAEKRLDAIQRASTLGAGFMLATEDLEIRGAGELLGEQQSGSMQAIGYSLYMEMLEKATKAIQKGLTAEINLHMPALIPDEYLGDVHQRLLFYKRISNTDTQEKLDNIRMELIDRFGTLPVSVKQLFHVHQLRLQAEELGITKIDLNSQGGYIEFSQ
>GAMMA2_P643439690 YP_002325776 ABBFA_001873 transcription-repair coupling factor [Acinetobacter baumannii AB307-0294]
SLLGSSAALLLKEIATLLVLVARNNQHVAQLESELEFY--GVKPTIFPDWEILPYDRLSPHQDIVSERLAILSNIGVLLISASTLAQRVAPYSWVLGEHFDIKVGQKFDLEQQKLRLVQAGYHLVDTVYDHGEFAVRGSIMDIFASGQESPIRIDLFDDEIDSLKFFDPETQRTTTTLKSFTVLPAKEFPL-KEASPGIEFYLPLFFMFTTYLPKNCISAVKKYIDANHPVLLVAESAGRRESLKDALRSITNAPLDRGLLLTDLTVISENQLYEHEEFLIRSLTELSIGAPVVHIDHGVGRYAGLITLAIEGQDYEFLQLDYAEDAKVYVPVTNLHLISRYSGGDPDLAPLHKIGTDAWSKAKRKALEQIHDVAAELLHIQARRQSKPGFAFELDQSLYMQFASGFAYEETLDQANAIEATLYDMQQAKPMDRLVCGDVGFGKTEVAMRAAFVAVQNGKQVAVLVPTTLLAQQHYESFKDRFADWPVRIEVLSRFGSNKTHLKNIEDLANGKVDIVVGTHKLLQENVQFKDLGLMVVDEEHRFGVRDKERIKALRADVDMLTLTATPIPRTLNMAFSGMRDLSIIATPPARRLAVKTFVQENTDASIKEAILRELLRGGQVYFLHNEVETIERAAENIRVLVPEARVAVAHGQMRERELEQVMQQFYHKEYNVLVCSTIIETGIDVPNANTILIERADKLGLAQLHQLRGRVGRSHHQAYAYLLVPSIKHLKGDAEKRLDAIQRASTLGAGFMLATEDLEIRGAGELLGEQQSGSMQAIGYSLYMEMLEKATKAIQQGLTAEINLHIPALIPDDYLGDVHQRLLFYKRISNTDTQEKLDNIRMELIDRFGIPPQSVKHLFSVHQIRLKAEHLGITKIDINTQGGNIEFSP
>GAMMA2_P641584214 YP_001707216 ABSDF1843 transcription-repair coupling protein [Acinetobacter baumannii SDF]
SLLGSSAALLLKEIATLLVLVARNNQHVAQLESELEFY--GVKPTIFPDWEILPYDRLSPHQDIVSERLAILSNMGVLLISASTLAQRVAPYSWVLGEHFDIKVGQKFDLEQQKLRLVQAGYHLVDTVYDHGEFAVRGSIMDIFASGQESPIRIDLFDDEIDSLKFFDPETQRTTTTLKSFTVLPAKEFPL-KEASPGIEFYLPLFFMFTKYLPKNCISAVKKYDEANHPVLLVAESAGRRESLKDALRSFITNPLDRGLLLTDLTVISENQLYEHEEFLIRSLTELSIGAPVVHIDYGVGRYAGLITLAIGD--YEFLQLDYAEDAKVYVPVTNLHLISRYSGGDPDSAPLHKIGTDAWSKAKRKALEQIHDVAAELLHIQARRQSKPGFAFELDQSLYMQFASGFAYEETLDQANAIEATLYDMQQAKPMDRLVCGDVGFGKTEVAMRAAFVAVQNGKQVAVLVPTTLLAQQHYESFKDRFADWPVRIEVLSRFGSNKTHLKNIEDLANGKVDIVVGTHKLLQENVQFKDLGLMVVDEEHRFGVRDKERIKALRADVDMLTLTATPIPRTLNMAFSGMRDLSIIATPPARRLAVKTFVQEHTDASIKEAILRELLRGGQVYFLHNEVETIERAAENIRVLVPEARVAVAHGQMRERELEQVMQQFYHKEYNVLVCSTIIETGIDVPNANTILIERADKLGLAQLHQLRGRVGRSHHQAYAYLLVPSIKHLKGDAEKRLDAIQRASTLGAGFMLATEDLEIRGAGELLGEQQSGSMQAIGYSLYMEMLEKETKAIQQGLTAEINLHIPALIPDDYLGDVHQRLLFYKRISNTDTQEKLDNIRMELIDRFGIPPQSVKHLFSVHQIRLKAEHLGIKKIDINTQGGNIEFSP
>GAMMA2_P640599858 YP_001280527 PsycPRwf_1636 transcription-repair coupling factor [Psychrobacter sp. PRwf-1]
PAYAAAGSLWLASLSDLKVVVTKDQNQLNQIETELAFC--GVDAYVFPDWETLTYDELSPHQDIVSERINLLTDMGILLISIQTLMQRMAPPSWLIGQHFDLSVGDIFDINQQREMLAAAGYRAVDNVFEPGEFAVRGSVIDIFAMGQPFPLRLDLFDNEIETIRFFNPQTQRTLSTITQFQILPAKEFPLDE-ASSGLEYYQPLFFHLFSYFPKDTLLELLNYWDLARPILVVAETAGRREILLELFRGLTIAPIERGAVIDQLSIISETQLFGREEFLVKSVTELTEGSPVVHIDQGIGRYHGLITLDI-GGEQEFIHLKYADDASIYVPVANLQLISRYSGGDPALAPLHKIGSGKWDKAKQKALEQIHDVAAELLNMQARRQAKEGIHFKVETAQYELFASQFAFEETPDQANAIDAVMHDMKQNKPMDRLICGDVGFGKTEVAMRAAFIAVNSGYQVAVLVPTTLLAGQHEDNFKDRFADWPIRVETLSRFGGKKYQDQVLEDLAAGKVDIVIGTHKLLQKDVKFANLGLMIVDEEHRFGVRHKERIKAIQSDVDSLSMTATPIPRTLNMALTGMRDMSIIATPPARRLSIKTFVMQKTNQLMKEAILRELLRGGQVYLLHNDVASIERMAENIRELVPEARVGVAHGQMNERGLEQVMQQFYHKKFNVLVCTTIIETGIDVPNANTIIIERADKFGLAQLHQLRGRVGRSHHQAYCYLLVPSVKGLKGDAKKRLTAIERANTLGAGFMLASEDLEIRGAGEILGKQQSGNMQAIGFSLYMDMLERATKAIKAGLTSDINLHSSALIPEDYVNDVPQRLLFYKRISNAEDKEVLTDIRTEMIDRFGALPDQTKQLFAIHQLRVLAEPLAIYKIDATSNSVILEFAP
>GAMMA2_P637670173 YP_264766 Psyc_1484 transcription-repair coupling factor [Psychrobacter arcticus 273-4]
PVHGAVSSLWLASLVQLKVVVTRDQNQLNQIETELAFCG-VD-AHVFPDWETLTYDELSPHQDIVSERINLLTDMGVLLISVQALMHRVAPPSWLIGQHFDLSVGDRFDINTQRALLAKAGYRAVDNVFEPGEFAVRGSIIDIFAMGQPFPLRLDLFDDEIETIRFFNPQTQRTLIKIKQFQILPAKEFPLDE-ASSGLEYYQPLFFSLFSYLPSDTLTELLAFAQTATPVLIVAETAGRREILIELFKGLTVAPIERGVYVPELVLISETQLFGREEFLVKSVTEITDGSPVVHIEHGIGRYNGLITLDV-GGEQEFIHLKYANDASIYVPVANLQMINRYSGGDPALAPLHKIGSGKWDKAKQKALEQIHDVAAELLNMQARREAKVGIHFKIDPSQYELFASQFAFEETPDQANAIHAVMEDMRQNQPMDRLICGDVGFGKTEVAMRAAFIAVSAGYQVAVLVPTTLLAGQHEDNFRNRFADWPVRIETLSRFGGKKHQDTVLTDLAAGKVDIVIGTHKLLQPDVKFSNLGLMIVDEEHRFGVRHKERIKAIQTDVDSMSMTATPIPRTLNMALSGMRDMSIIATPPARRLAIKTFVMQKTEALMKEAILRELLRGGQVYLLHNDVASIERMAETIRELVPEARVGVAHGQMQERQLEQVMQQYYHKKFNVLICSTIIETGIDVPNANTIIIERADKFGLAQLHQLRGRVGRSHHQAYCYLLVPSIKGLKGDAKRRLHAIERANTLGAGFMLASEDLEIRGAGEILGKQQSGNMQAIGFSLYMDMLERATKAIKAGLTSEINLHSSALIPEEYLHDVHQRLLFYKRIGNADDKEALTDIRTEMIDRFGTLPDQTKQLFAVHGLRIQAEPLKINKIDANSNSMTLEFAP
>GAMMA2_P637974129 YP_580925 Pcryo_1664 transcription-repair coupling factor [Psychrobacter cryohalolentis K5]
PVHGAVSSLWLASLVQLKVVVTRDQNQLNQIETELAFC--GVDAHVFPDWETLTYDELSPHQDIVSERINLLTDMGVLLISVQALMHRVAPPSWLIGQHFDLSVGDQFDINTQRTLLAKAGYRAVDNVFEPGEFAVRGSIIDIFAMGQPFPLRLDLFDDEIETIRFFNPQTQRTLVKIKQFQILPAKEFPLDEGASSGLEYYQPLFFSLFAYLPSDTLTELLAFAQTATPVLIVAETAGRREILIELFKGLTVAPIERGVYVPELVLISETQLFGREEFLVKSVTEITDGSPVVHIEHGIGRYNGLITLDV-GGEQEFIHLKYADDASIYVPVANLQMINRYSGGDPALAPLHKIGSGKWDKAKQKALEQIHDVAAELLNIQARREAKVGIHFKIDISQYELFASQFAFEETPDQASAIHAVMEDMKQNQPMDRLICGDVGFGKTEVAMRAAFIAVSAGYQVAVLVPTTLLAGQHEDNFRNRFADWPVRIETLSRFGGKKHQDTVLTDLAAGKVDIVIGTHKLLQPDVKFSNLGLMIVDEEHRFGVRHKERIKAIQTDVDSMSMTATPIPRTLNMALSGMRDMSIIATPPARRLAIKTFVMQKTDALMKEAILRELLRGGQVYLLHNDVASIERMAETIRELVPEARVGVAHGQMQERQLEQVMQQYYHKKFNVLICSTIIETGIDVPNANTIIIERADKFGLAQLHQLRGRVGRSHHQAYCYLLVPSIKGLKGDAKRRLHAIERANTLGAGFMLASEDLEIRGAGEILGKQQSGNMQAIGFSLYMDMLERATKAIKAGLTSEINLHSSALIPEEYLHDVHQRLLFYKRIGNADDKEALTDIRTEMIDRFGVLPDQTKQLFAVHGLRIQAEPLKINKIDANSNSMTLEFAP
>BETA13_P637141894 YP_207763 NGO0623 putative transcription-repair coupling factor [Neisseria gonorrhoeae FA 1090]
NLSQGSLPLALARYL-LKAVLTQDAEQALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKVLFVPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVRGGIVDLFPMGSETPYRIDLFDDEIDSIKTFDTDTQRTISPVSEIRLLPAHEFPTDSEFGAGVEYYLPLFFTLFDYIGEDALQALKDFQTFDGRILLCAESLGRRETMLGFLQQYLVASDLHGQTRPSIAVITESDLYQYSDGLLRDLAEINIGDPVVHEEHGIGRYTGLVTMDL-GETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHESVALHKLGSGAWNKAKRKAAEKARDTAAELLNLYAQRAAQSGHKFEINESDYQAFADGFGYEETEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHAQNFADRFADFPVKVASLSRFNNSKATKATLEGMADGTVDIVIGTHKLVQDDIKFKNLGLLIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGLRDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVGRSHHQAYAYLLT--PEYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQSGEMMQVGFTLYTEMLKQAVRDLKKGITTEIKLHSPALLPEDYCPDIHERLVLYKRLAVCETVQKINAIHEELVDRFGLTEQPVKTLIESHHLRLAAKELGIDAIDATSEAVTVTFGK
>BETA13_P642722061 YP_002001917 NGK_1292 putative transcription-repair coupling factor [Neisseria gonorrhoeae NCCP11945]
NLSQGSLPLALARYL-LKAVLTQDAEQALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKVLFVPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVRGGIVDLFPMGSETPYRIDLFDDEIDSIKTFDTDTQRTISPVSEIRLLPAHEFPTDSEFGAGVEYYLPLFFTLFDYIGEDALQALKDFQTFDGRILLCAESLGRRETMLGFLQQYLVASDLHGQTRPSIAVITESDLYQYSDGLLRDLAEINIGDPVVHEEHGIGRYTGLVTMDL-GETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHESVALHKLGSGAWNKAKRKAAEKARDTAAELLNLYAQRAAQSGHKFEINESDYQAFADGFGYEETEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHAQNFADRFADFPVKVASLSRFNNSKATKATLEGMADGTVDIVIGTHKLVQDDIKFKNLGLLIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGLRDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVGRSHHQAYAYLLT--PEYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQSGEMMQVGFTLYTEMLKQAVRDLKKGITTEIKLHSPALLPEDYCPDIHERLVLYKRLAVCETVQKINAIHEELVDRFGLTEQPVKTLIESHHLRLAAKELGIDAIDATSEAVTVTFGK
>BETA13_P641332981 YP_001599325 NMCC_1194 transcription-repair coupling factor [Neisseria meningitidis 053442]
NLSQGSLPLALARYL-LKVVLTQDAEQALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKVLFVPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVRGGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTDTQRTISPVSEIRLLSAHEFPTDSEFGAGVEYYLPLFFTLFDYIGEDALQALKDFQTFKGRILLCAESLGRRETMLGFLQQLPPGSNLHGQIQPSIAVITESDLYQYSDGLLRDLAEINIGDPVVHEEHGIGRYMGLVTMDL-GETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHENIALHKLGSGAWNKAKRKAAEKARDTAAELLNLYARRAAQSGHKFEINELDYQAFADGFGYEETEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHAQNFADRFADFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHKLVQDDIKFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGLRDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVGRSHHQAYAYLLT--PEYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQSGEMIQVGFTLYTEMLKQAVRDLKKGITTEIKLHSPALLPESYCPDIHERLVLYKRLAVCETVQQINAIHEELVDRFGLPEQPVKTLIESHHLRLMAKELGIDAIDAAGEAVTVTFGK
>BETA13_P637198170 NP_284213 NMA1491 transcription-repair coupling factor [Neisseria meningitidis Z2491]
NLSQGSLPLALARYL-LKVVLTQDAEQALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKVLFVPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKSDLVDAGYNHVSHVVAAGEFAVRGGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTETQRTISPVSEIRLLPAHEFPTDSEFGAGVEYYLPLFFTLFDYIGEDALQALKDFQTFDGRILLCAESLGRRETMLGFLQQLAPSPVGEGWGEGKIAVITESDLYQYSDGLLRDLAEINIGDPVVHEEHGIGRYMGLVTIDL-GETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHENIALHKLGSGAWNKAKRKAAEKARDTAAELLNLYARRAAQSGHKFEINELDYQAFADGFGYEETEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHAQNFADRFADFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHKLVQDDIKFKNVGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGLRDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVGRSHHQAYAYLLT--PEYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQSGEMIQVGFTLYTEMLKQAVRDLKKGITTEIKLHSPALLPESYCPDIHERLVLYKRLAVCETVQQINAIHEELVDRFGLPEQPVKTLIESHHLRLMAKELGINAIDAAGEAVTVTFGK
>BETA13_P637451924 NP_900816 CV1146 transcription-repair coupling factor [Chromobacterium violaceum ATCC 12472]
RLPDGLDSHAIAALA-PLLILAADAQAAQRLKAELPFFAPDLSIALFPDWETLPYDHFSPHGDLVSERLATLWQIQVVIAPVSTALGRLAPVSYLLGRTFFLKTGQQLDVEKLRGDMVTAGYQHVTQVMAPGEFSVRGSLIDLYPMGSPLPYRIDLFDAEIDSLKTFDPDTQRTLYPVPEVRMLPAREYPADESWPAGIEYYLPLFFTLFDYVGDDALHKLQRFIASGGRVLLAAESLGRRETMLAFLAELAVAPLYSGFMLPAIAVVTESELYQHSDAMLRDLAEVKAGDPVVHEAHGIGRYVGLVTMDL-GGETELMQLEYADGATLYVPVSQLQLISRYAGGATDDIQLHKLGNPAWEKAKKRAAEKARDTAAELLNLYAQRAAREGHSFTLSHADYAAFAAGFGFEETPDQATAIEAVIQDMCSGKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLVPTTLLAEQHFQNFSDRFADWPVRIAELSRFRSGKETKAALAGLADGGVDIVIGTHKLVQPDVAFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDVLTLTATPIPRTLSMALEGLRDFSAIATAPSRRLAVKTFVSPLSNGVVREAVLRELKRGGQVFFLHNEVDTIENMREKLAELIPEARIGVAHGQLRERELEQVMRDFLQQRFNLLLCSTIIETGIDIPNANTILINRADKFGLAQLHQLRGRVGRSHHQAYAYLLTPD--GMTRDAQKRLEAIQLSGELGAGFYLAMHDLEIRGAGEVLGEGQSGEMQEVGFSLFTEMLKQAVRDLKKGVTTEINLHSPALLPDGYCPDVHERLLIYKRLASCETEAEIDDIHEELIDRFGLPPQSVKTLIESHRLRLVAKELGVQKLDASEVAVQITFIK
>BETA13_P643800231 YP_002794631 LHK_00629 Mfd [Laribacter hongkongensis HLHK9]
ALPRGADSARLAALARPLVILTADPQAARRIADELPFFDPELEVAFFPDWETLPYDQLSPHADLVSERLATLWKLDVIVTAVPTAMGRLAPVEFLAGRTFLLKAGDRLDADQLRADLALAGYTHVTQVYAPGEFSVRGGLIDLFPSGAALPYRIELFDDEIDTLRTFDVDTQRTLYPVNDVRLLPAREFPTDEGIPAGIEYYLPLFFTFFDYVGEQALARLKAFLATPARTLLVAESLGRRETLTQFLGELTVGTLTGGFVDRQEALLSEADLYQTTDAMLRDLAEVKVGDPVVHEAHGIGRYLGLVSMDL-GGQTEMMQLEYADGATLYVPVSQLHLISRYAGHASDSVQLTRLGSPQWERAKQRAAQKARDTAAELLNLYARRAAREGHAFELSAHDYEAFAAGFGFEETPDQQAAIEAVIHDMTAGRPMDRLVCGDVGFGKTEVALRAAFVAAMGGKQVAVLVPTTLLAEQHYQNFADRFADWPLKIVELSRFRSAKEQKAALAGLADGSVDIVIGTHRLVQPDVEFARLGLVIIDEEHRFGVRQKEQLKRLRANVDVLTLTATPIPRTLAMSLEGLRDFSVIATAPNRRLSVKTFVTPQNNGVIREAVLRELKRGGQVFFLYNEVETIENMREKLTELLPEARVQVAHGQMRERELEQVMRDFNQQRFNVLLCSTIIETGIDIPNANTIIIHRADRFGLAQLHQLRGRVGRSHHQAYAYLLT--GEGMTKDAMKRLEAIQMMEDLGSGFYLAMHDLEIRGAGEVLGEGQSGEMHEIGFSLYTEMLKSAVRALKKGVTTEVNLHAPALLPDSYCPDVHERLVLYKRLASCETEGEIDAIHEELIDRFGLPDVPVKTLIDSHRLRLAARSLGIDKIDASDSAVQLTFSR
>BETA13_P639852104 YP_999080 Veis_4359 transcription-repair coupling factor [Verminephrobacter eiseniae EF01-2]
RPAGSADSLLLARLAEATAIVVADASDAQRLIDEFAFFAPALRCALFPDWETLPYDSFSPHQDLISERLATLWRIDVVLVPATTALYRLAPPAFLAGYTFHFALGQKLDAAQFKAQLTLAGYSHVSQVVSPGEYAVRGGLIDLFPMGASVPYRVDLFDDEIDSIRSFDPDNQRSLHPVPEVRLLPGREFPMDEAATAGIEYYLPLFFSMFDYLGSAAIAHIRSTPR---RVLLLAESAGRRESLLDFLRAIATAALSVGFIAEGIDFVTETELFGPVEALIKDLAELNLGDPVVHSAHGIGRYRGLVHMDL-GTPQEFLHLEYADQAVLYVPVSQLQQISRYTGVGADEAPLHKLGSGQWEKARRKAAEQVRDSAAELLDIYARRAAREGHAFRLATQDYEAFADEFGFEETADQRAAIEAVIQDMVSPRPMDRLVCGDVGFGKTEVALRAAFVAVSGGRQVAFLAPTTLLAEQHYQTLLDRFGPWPVKVAEVSRFRSGKEVAASLAGIGDGTVDIVVGTHKLLSGAIRFHDLGLLIIDEEHRFGVRHKEQMKQLRAEVDVLTLTATPIPRTLGMALEGLRDLSVIATAPQRRLAIKTFVRNEGTGVIREAVLRELKRGGQVYFLHNEVETIEHRRQRLEEILPEARIAVAHGQMPERALERVMRDFVAQRYNLLLCSTIIETGIDVPTANTILMSRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDTEGLTRQAAQRLDAIQQMEELGSGFYLALHDLEIRGAGQVLGENQSGNMLEVGFQLYNEMLAEAVKALRAGATTDINLHAPALLPEHYCGDVQLRLSFYKKLASAKTPEQIDGLLEELVDRFGKLPPQAQTLIDVHRLRVLSRPYGVVKVDAAPGVIHITFRP
>BETA13_P637916146 YP_522596 Rfer_1331 transcription-repair coupling factor [Rhodoferax ferrireducens T118]
RPVGSADALLLAQLGKVTAIITADALDAQRLIDEMAFFAPELRCVLFPDWETLPYDTFSPHQDLISERLATLWRIDVVLVPATTALYRLAPPSFLAGYTFHFKVKQKLDEAKLKAQLTLAGYSHVTQVVSPGEYAVRGGLIDLFPMGSAVPYRVDLFDDEIDSIRTFDPDSQRSLYPVPEVRLLPGREFPMDDEATAGIEYYLPLFFTVFDYLGEAATARLKAHIR-NTRTLVLAESEGRRASLLDFLHSIATSSLSAGFGWLEIDFVTETELFGPVEALIKDLSELNIGDPVVHSAHGIGRYRGLINLDL-GEPQEFLHLEYADKATLYVPVSQLQLISRYTGVAADEAPLHKLGSGQWDKAKRKAAEQVRDSAAELLNIYARRALREGHAFRYSAGDYEIFANDFGFEETADQSAAIHAVIQDMISPRPMDRLICGDVGFGKTEVALRAAFIAITGGKQVAFLAPTTLLAEQHYQTLVDRFSKWPVKVAEMSRFRSAKEITAAMKGIADGTIDIVVGTHKLLSKDTHFKDLGLLIIDEEHRFGVRHKEQMKALRAEVDVLTLTATPIPRTLGMALEGLRDLSVIATAPQRRLAIKTFVRTEGAGVIREAVLRELKRGGQVYFLHNEVETIENRRAKLEELLPEARIAVAHGQMPERQLEAVMRDFVAQRFNLLLCSTIIETGIDVPTANTIVMARADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDLEGLTKQAQQRLDAIQQMEELGSGFYLAMHDLEIRGAGEVLGENQSGNMLEVGFQLYNEMLSEAVRCLKAGVSTDINLHAPALLPNDFCGDVHLRLSFYKKLATANNTNQIDALLEELVDRFGKLPNQAQTLIDVHRLRVLAKPFGVVKVDAAPGVITITFKK
>BETA13_P639835558 YP_982774 Pnap_2550 transcription-repair coupling factor [Polaromonas naphthalenivorans CJ2]
QPTGSADALLLARLGELTAIVTSDASTAQRLMDEMAFFAPDLRCALFPDWETLPYDAFSPHQDLISERLATLWRIDVVIVPATTALYRLAPPSFLAGYTFEFKVRQKLDETRLKAQLTLAGYSHVTQVVSPGEYAVRGGLIDLFPMGSLVPYRVDLFDDEIDSIRTFDPDSQRSLYPVPEVRLLPGREFPMDDDATAGIEYYLPLFFTVFDYLGKNATDPLAGFKRTAHRVLLLAESDGRRESLLDFLRAIATAALHTGFSWLEIDFVTETELFGVVEALIKDLSELNVGDPVVHSAHGIGRYRGLINLDL-GSPQEFLHLEYADKATLYVPVSQLHLISRYTGVSADEAPLHKLGSGQWEKARRKAAEQIRDSAAELLNIYARRAAREGHAFRYSPGDYEVFANDFGFDETPDQSAAIHAVIQDMISPRPMDRLVCGDVGFGKTEVALRAAFIAITGGKQVALLAPTTLLAEQHYQTLVDRFAKWPVRVAEMSRFRSAKEITAAIKGLADGSVDIVVGTHKLLSETTKFKDLGLLIIDEEHRFGVRHKEAMKALRAEVDVLTLTATPIPRTLGMALEGLRDLSVIATAPQRRLAIKTFVRTEGNGVIREAVLRELKRGGQVYFLHNEVETIENRRQKLEELLPEARIAIAHGQMPERELERVMKDFVAQRFNVLLCSTIIETGIDVPSANTILMSRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDLEGLTKQASQRLDAIQQMEELGSGFYLAMHDLEIRGTGEVLGENQSGNMLEIGFQLYNEMLGEAVASLKAGVTTEINLHAPALLPSDYCGDVHLRLSFYKKLATAKKTDQIDALLEELVDRFGKLPAQAQTLIDVHRLRVIARPYGVVKVDAAPGVITITFKK
>BETA13_P637942381 YP_549531 Bpro_2717 transcription-repair coupling factor [Polaromonas sp. JS666]
QPPGSADALLLARLGELTAIITSDATTAQRLMDEMAFFAPDLRYALFPDWETLPYDTFSPHQDLISERLATLWRIDVVIVPATTALYRLAPPSFLAGYTFEFKVKQKLDESRLKAQLTLAGYSHVTQVVGPGEYAVRGGLIDLFPMGSLVPFRVDLFDDEIDSIRTFDPDSQRSLYPVPEVRLLPGREFPMDDDATSGIEYYLPLFFTVFDYLGSDATARFKGHRNTAHRVLVLAESDGRRESLLDFLRAIATAALNTGFSWEGIDFITETELFGVVEALIKDLSELNVGDPVVHSAHGIGRYRGLLNLDL-GGSQEFLHLEYADKATLYVPVSQLHLISRYTGVSAEEAPLHRLGSGQWEKAKRKAAEQIRDSAAELLNIYARRAAREGHAFRYSPGDYEAFANDFGFEETADQRAAIHAVIQDMISPRPMDRLVCGDVGFGKTEVALRAAFIAITGGKQVALLAPTTLLAEQHYQTLVDRFAKWPVKVAEMSRFRSAREITAAIKGLADGSVDIVVGTHKLLSQDVKFQRLGLLIIDEEHRFGVRHKETMKAMRAEVDVLTLTATPIPRTLGMALEGLRDLSVIATAPQRRLAIKTFVRSENNGVIREAVLRELKRGGQVYFLHNEVETIQNRREKLEEILPEARIAVAHGQMPERELERVMKDFVAQRYNLLLCSTIIETGIDVPSANTIVMSRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDIEGLTKQASQRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGESQSGNMLEVGFQLYNEMLSEAVASLKAGVTTEINLHAPALLPNDYCGDVHLRLSFYKKLATAKNTDQIDALLEEIVDRFGKLPPQAQTLIDVHRLRVIARPYGVVKVDAAPGLINITFKK
>BETA13_P641297943 YP_001563871 Daci_2848 transcription-repair coupling factor [Delftia acidovorans SPH-1]
RPVGSADALLLARLGEVTAIVTADASDAQRLIDEMAFFAPGLRCALFPDWETLPYDSFSPHQDLISERLATLWRIDVVLVPATTALYRLAPPSFLAGYTFEFKSGQKLDEAKLKAQLTLAGYQHVSQVVSHGEYAVRGGLIDLFPMGSLQPYRVDLFDDEIDSIRTFDPDTQRSLYPVPEVRLLPGREFPMDEDATAGIEYYLPLFFTVFDYLGADATARLQRHIASAHRILLLAESDGRRESLLDFFRAIATAGLMNGFAWVELDFVTETELFSPVEALIKDLSELKVGDPVVHSDHGIGRYQGLVNMDM-GTPQEFLHLEYAGNAVLYVPVSQLQLISRYTGVSPEDAPLHKLGGTQWEKAKRKAAEQVRDSAAELLNIYARRAARQGHAFRYSPQDYEQFANDFGFEETADQRAAIHAVIQDMISPQPMDRLVCGDVGFGKTEVALRAAFVAITGGKQVAFLAPTTLLAEQHYQTLVDRFSKWPIKVAEVSRFRSGKEITAAVKGIADGSVDIVVGTHKLLSESTQFKNLGLLIIDEEHRFGVRHKEAMKAMRAEVDVLTLTATPIPRTMGMALEGLRDLSVIATAPQRRLAIKTFVRNEGTGVIREAVLRELKRGGQCYFLHNEVETIENRKQKLEEILPEARIAVAHGQMPERELERVMRDFVAQRYNILLCSTIIETGIDVPSSNTILISRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDLDSLTKQAQQRLEAIQQMEELGSGFYLAMHDLEIRGAGEVLGENQSGNMMEVGFQLYNEMLSEAVRSLKAGASTDINLHAPALLPNDYCGDVHLRLSFYKKLATARTSDQIDTLLEEIVDRFGKLPPQAQTLIDVHRLRVLSQPYGVVKVDAAPGVINITFKP
>BETA13_P639822782 YP_969943 Aave_1580 transcription-repair coupling factor [Acidovorax avenae citrulli AAC00-1]
RPVGSADALLLARVAKTTAIVTADATDAQRLIDEMAFFAPELRCALFPDWETLPYDTFSPHQDLISERLATLWRIDVVLVPATTALYRLAPPSFLAAYTFHFKVRQKLDEAKFRAQLTLAGYSHVSQVVSPGEYAVRGGLIDLFPMGSPVPYRVDLFDDEIDSIRTFDPDTQRSLYPVPEVRLLPGREFPMDDAATAGIEYYLPLFFTVFDYLGEDATARLHAHIRTRHRVLLLAESDGRRESLLDFLRAIATAALATGFAWVGIDFVTETELFGAVEALIKDLSELTLGDPVVHSAHGIGRYRGLIHMDV-GTPQEFLHLEYADKAVLYVPVSQLQLISRYTGVSADEAPLHKLGSGQWEKAKRKAAEQVRDSAAELLNIYARRAAREGHAFRYSPQDYEQFANDFGFEETADQNAAIHAVIQDMISPRPMDRLVCGDVGFGKTEVALRAAFVAVTGGKQVAFLAPTTLLAEQHYQTLVDRFSKWPVKIAEVSRFRSGKEITAAIKGIGDGTVDIVVGTHKLLSESTKFHNLGLLIIDEEHRFGVRHKEQMKQLRAEVDVLTLTATPIPRTLGMALEGLRDLSVIATAPQRRLAIKTFVRNEGTGVIREAVLRELKRGGQCYFLHNEVETIENRRQKLEEILPEARIAVAHGQMPERELEKVMRDFVAQRYNILLCSTIIETGIDVPTANTIIMSRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDVDGLTKQAAQRLDAIQQMEELGSGFYLAMHDLEIRGAGEVLGESQSGNMLEVGFQLYNEMLAEAVKSLKAGVTTDINLHAPALLPDDYCGDVHLRLSFYKKLATAKTADQIDALLEEIVDRFGKLPPQAQTLIDVHRLRVLSQPYGVIKVDAAPGVTNITFRP
>BETA13_P639840199 YP_987358 Ajs_3157 transcription-repair coupling factor [Acidovorax sp. JS42]
RPVGSADALLLARLGETTAIVTADATDAQRLIDEMAFFAPELRCALFPDWETLPYDSFSPHQDLISERLATLWRIDVVLVPATTALYRLAPPSFLAGYTFHFKVKQKLDEAKLRAQLTLAGYQHVSQVVGHGEYAVRGGLIDLFPMGSAVPYRVDLFDDEIDSIRTFDPDSQRSLYPVPEVRLLPGREFPMDDAATAGIEYYLPLFFTVFDYLGNEATARLQAHIRTAQRVLLLAESDGRRESLLDFLRTIATAALASGFAWEGLDLVTETELFGSVEALIKDLSELKVGDPVVHNQHGIGRYRGLIHMDV-GSPQEFLHLEYADKAVLYVPVSQLQLIGRYTGVSADEAPLHKLGSGQWEKAKRKAAEQVRDAAAELLNIYARRAAREGHAFRYSPNDYEQFANDFGFEETADQKAAIHAVVQDMISPRPMDRLVCGDVGFGKTEVALRACFVAVAGGKQVAFLAPTTLLAEQHYRTLSDRFSKWPVKVAEVSRFRSGKEITAAVKGIADGTVDIVVGTHKLLSESTQFKNLGLLIIDEEHRFGVRHKEAMKQFRAEVDVLTLTATPIPRTMGMALEGLRDLSVIATAPQRRLAIKTFVRNEGTGVIREAVLRELKRGGQCYFLHNEVETIENRRQKLEEILPEARIAVAHGQMPERELERVMRDFVAQRYNILLCSTIIETGIDVPTANTIIISRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDIDGLTKQAQQRLDAIQQMEELGSGFYLAMHDLEIRGAGEVLGESQSGNMMEIGFQLYNEMLAEAVKQLKAGAATDINLHAPALLPDDYCGDVHLRLSFYKKLATAKTGDQIDGLLEEIVDRFGKLPPQAQTLIDVHRLRVLSAPYGVVKVDAAPGVITITFKP
>BETA13_P643655813 YP_002553940 Dtpsy_2504 transcription-repair coupling factor [Diaphorobacter sp. TPSY]
RPVGSADALLLARLGETTAIVTADATDAQRLIDEMAFFAPELRCALFPDWETLPYDSFSPHQDLISERLATLWRIDVVLVPATTALYRLAPPSFLAGYTFHFKVKQKLDEAKLRAQLTLAGYQHVSQVVGHGEYAVRGGLIDLFPMGSAVPYRVDLFDDEIDSIRTFDPDSQRSLYPVPEVRLLPGREFPMDDAATAGIEYYLPLFFTVFDYLGNEATARLQAHGQTGQRVLLLAESDGRRESLLDFLRAIATAALASGFAWEGLDLVTETELFGSVEALIKDLSELKVGDPVVHNQHGIGRYRGLIHMDV-GSPQEFLHLEYADKAVLYVPVSQLQLIGRYTGVSADEAPLHKLGSGQWEKAKRKAAEQVRDAAAELLNIYARRAAREGHAFRYSPNDYEQFANDFGFEETADQKAAIHAVVQDMISPRPMDRLVCGDVGFGKTEVALRACFVAVAGGKQVAFLAPTTLLAEQHYRTLSDRFSKWPVKVAEVSRFRSGKEITAAVKGIADGTVDIVVGTHKLLSESTQFKNLGLLIIDEEHRFGVRHKEAMKQFRAEVDVLTLTATPIPRTMGMALEGLRDLSVIATAPQRRLAIKTFVRNEGTGVIREAVLRELKRGGQCYFLHNEVETIENRRQKLEEILPEARIAVAHGQMPERELERVMRDFVAQRYNILLCSTIIETGIDVPTANTIIISRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDIDGLTKQAQQRLDAIQQMEELGSGFYLAMHDLEIRGAGEVLGESQSGNMMEIGFQLYNEMLAEAVKQLKAGAATDINLHAPALLPDDYCGDVHLRLSFYKKLATAKTGDQIDGLLEEIVDRFGKLPPQAQTLIDVHRLRVLSAPYGVVKVDAAPGVITITFKP
>BETA13_P641664775 YP_001791038 Lcho_2006 transcription-repair coupling factor [Leptothrix cholodnii SP-6]
RPIGSADALLLARFARLLAVIVAEPADAQRLPDELAFFAPELRVAVFPDWETLPYDSFSPHQDLISERLATLWRVDVVLLPATTALTRLAPPSFLAGYTFHFKQKQKLDDAALKAQLTLAGYQHVSQVVSPGEYAVRGSLIDLFPMGSLVPYRVDLFDNEVDSIRVFNPDSQRSLYPVPEVRLLPGREFPMDDAATAGIEYYLPLFFTFFDYLGDAAAEKIRSQKN---RLLIVAESAGRRESLLELLRDIATAPLAAGFFWTDIQFVTETELFDAVEALIKDLSELKVGDPVVHANHGIGRYQGLVSIDL-GGPTEFLFLEYADQATLYVPVSQLQLISRYTGVSAEEAPLHKLGSGQWEKAKRKAAEQVRDAAAELLNLYARRASREGFAFRFSPQDYEAFAASFGFEETADQNAAIHAVIQDMISPRPMDRLVCGDVGFGKTEVALRAAFVAVTGGKQVALLAPTTLLAEQHYQTLADRFAQWPVKVAEISRFRSTKEVKATLDGLAAGTVDIVVGTHKLLSPDSKFKNLGLLIIDEEHRFGVRHKEQMKALRAEVDVLTLTATPIPRTLGMALEGLRDLSVIATAPQRRLAIKTFVRNETGGTIREAVMRELKRGGQVYFLHNEVDTIENRRQKLEEMLPEARIAVAHGQMPERELERVMRDFVAQRHNVLLCSTIIETGIDVPSANTIVISRADKFGLAQLHQLRGRVGRSHHQAYAYLLVPDTEGLTKQAQQRLDAIQAMEELGSGFYLAMHDLEIRGAGEVLGDNQSGNMMEVGFQLYNEMLAEAVRAMKAGAATEVNLHAPALLPDSYCGDVHVRLNLYKRLATVDRLDKIDSLLEEIVDRFGKLPAQGQTLFDLHRLRVQARPYGVVKIDAGPAVMNIHFKP
>BETA13_P640090137 YP_001020766 Mpe_A1569 transcription-repair coupling factor [Methylibium petroleiphilum PM1]
RPFGSADALLLARFARITAVISAEPADTQRLQDELAFFAPGLRVAVFPDWETLPYDSFSPHQDLISERLATLWRIDVVLMPATTALLRLAPPSFLAAYTFHFVQKQKLDEAALKAQLTLAGYQHVSQVVSPGEYAVRGGLIDLFPMGSPVPYRVDLFDNEVDSIRTFDPDSQRSLYPVPEVRLLPGREFPMDEAAGPGIEFYLPLFFTVFDYLGAAAERKLEQHTDTGPRVLLVAESEGRRESLLELLRDITVAPLASGFFWRGIQFVTETELFAPVDALIKDLSELKVGDPVVHANHGIGRYVGLVNIDL-GGPSEFLHLEYADKATLYVPVAQLQLISRYTGVSAEEAPLHRLGSGQWEKAKRKAAEQVRDTAAELLNLYARRAAREGHAFRFSPQDYEAFAASFGFEETADQRAAIHAVIQDLVSPKPMDRLVCGDVGFGKTEVALRAAFVAVTGGKQVALLAPTTLLAEQHYQNIADRFAKWPVKVAEMSRFRSAKEIKAAMAGLAEGTIDIVVGTHKLLSQDTKFANLGLLIIDEEHRFGVRHKEAMKALRAEVDVLTLTATPIPRTLGMALEGLRDLSVIATAPQRRLAIKTFVRGESNGTIREAVMRELKRGGQVYFLHNEVETIENRRRTLEELLPEARIAVAHGQMPERELERVMREFVAQKHNLLLCSTIIETGIDVPTANTIVMSRADKFGLAQLHQLRGRVGRSHHQAYAYLLVPDVEGLTKQAAQRLQAIQDMEELGSGFYLAMHDLEIRGAGEVLGENQSGNMMEVGFQLYNEMLATAVREMKAGVATDVNLHAPALLPDAYCGDVHVRLSLYKRLASADRLDKIDTMLEEIVDRFGKLPPQAQTLFDVHRLRVQARAYGVLKIDAGPQAMSIGFRP
>BETA13_P641671542 YP_001797724 Pnec_0912 transcription-repair coupling factor [Polynucleobacter necessarius STIR1]
GLIGSSDAALIAQTARVMVIFCAQAQEAQRLLEEIPAFAPQLKTRLLPDWEILPYDHFSPHQDLVSERLATLYELNIVLVPVTTALQRLGPPNFLASHTFFFRQGDKLNEAALKLQLQQAGYDPVSAVMRPGEYSIRGGLFDLFPMGSNLPYRLDLFGDEIEQIRAFNPDTQRSLYPVKEVRLLPGHEFPFDDTPSAGIESYLPLFFSLFDYLPRSGDSRLRNVVA-SERVLICSDSAGRKESIRQLFDELVTAPLFNGFSWPSLIVITEAELFTTSDMLFKDLSELKIGDPVVHAEHGIGRYQGLVLLNL-ASFEEFLHLQYAGQATLYVPVQQLQMVTRYAGSDPDSAPLHQLGSGQWGKAKRKAAQQIRDTAAELLGLYAARAIRKGHAFEFSAHDYAAFAESFGFEETPDQANAIAAVIGDMTSGTPMDRLVCGDVGFGKTEVALRASFVAVMGGKQVAILAPTTLLAEQHVATWKDRFADWPVRIVELSRFKTTKEINVALAAIAKGEADIIIGTHKLLSKETQFANLGLVIADEEHRFGVRQKDALKALRAEVDILTLTATPIPRTLGMAMEGLREFSIIATAPQKRLAIKTFVRREGDDVIREAVLREIKRGGQVYFLHNEVETIQNRKHALQELIPEARISVAHGQMHERELESVMREFVTQRTNILLCTTIIETGIDVPTANTIIMHRADKFGLAQLHQLRGRVGRSHHRAYAYLLVPNSEALSKQAQLRLNAIQAMEELGSGFYLAMHDLEIRGAGEVLGDKQSGEIHEIGFQLYTEMLNRAVKSLRSGATTDVNLGVPALLPEDYCPDVHERLSLYKRFAGTHDFSELMGLREELVDRFGDLPDQARSFYETHRLRLEMAGFGIKKIDATPVSIQIQFIP
>BETA13_P640471089 YP_001155709 Pnuc_0929 transcription-repair coupling factor [Polynucleobacter sp. QLW-P1DMWA-1]
GLVGSADAALLAQTARVMVVFCAQAQEAQRLADEIPAFAPQLKVRLLPDWEILPYDHFSPHQDLVSERLATLYELDIVLVPVTTALQRLGPPQFLSGHTFFFRQGDKLNESALRLQLQQAGYDPVSAVLRPGEYSIRGGLIDLFPMGSNLPYRLDLFGDEIEQIRAFDPDTQRSLYPVKEVRLLPGHEFPFNDEPSAGIESYLPLFFTLFDYFPRSGDSRLRAVVA-QQRVLICSDSAGRKESIRQLLDELVTAPLFNGFLWSALLVLTEAELFTSPDMLFKDLSELKIGDPVVHAEHGIGRYQGLVLLNL-AIFEEFLHLQYAGQATLYVPVQQLQMVTRYAGSDPDSAPLHQLGSGQWDKAKRKAAQQIRDTAAELLGLYAARAIRKGHAFEFSAHDYAAFSESFGFEETPDQANAIAAVIGDMTSGTPMDRLVCGDVGFGKTEVALRASFVAVMGGKQVAILAPTTLLAEQHVATWKDRFADWPVRIVELSRFKTTKEINAALEAIAKGDADIIIGTHKLLSKETQFANLGLVIVDEEHRFGVRQKDALKVLRAEVDILTLTATPIPRTLGMAMEGLRELSIIATAPQKRLAIKTFVRREGDGVIREAVLREIKRGGQVYFLHNEVETIQNRKHALQELIPEARISVAHGQMHERELESVMREFVTQRTNILLCTTIIETGIDVPTANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVPDPEALSKQAQLRLNAIQAMEELGSGFYLAMHDLEIRGAGEVLGDKQSGEIHEIGFQLYTEMLNRAVKSLRSGATTDVNLGVPALFPEDYCPDVHERLSLYKRFAGCNDFSELMGLREELVDRFGDLPDQAKSFYETHRLRLEMIGFGIKKIDATPASIQIQFIP
>BETA13_P637680436 YP_285181 Daro_1965 Transcription-repair coupling factor [Dechloromonas aromatica RCB]
SLAGSADALALAEIAVLLAVVTANAADAQRLLDEIPWFAPNLRVRLLPDWETLPYDTFSPHQDLVSERLATLWAADILLVPATTAVYRLAPPAFLAAYTFAFKKGETLDAEKFRSQVTLAGYAHVTQVVSPGEYSIRGGLIDLFPMGSQLPYRLDLFDDEIESIKTFDVDTQRTVYPVPEVRLLPAREFPMDDKASAGIEYYLPLFFTVFDYLPRDAVGKLKAYLAQPGRVLLLAESAGRRETLATMLTELGVGPLHGGFALPDLAFITETELYAGFDNWLKDLTELKVGDPVVHESHGIGRYRGLIRMDL-GGEQEFLELHYANEAKLFVPVAQLHVISRYSGAEPEAAPLHTLGSGQWEKAKRRAAEQARDTAAELLTLYAARAARQGHAFSFQENDYEAFADGFGFEETHDQAQAIAAVIEDMRSGKPMDRLVCGDVGFGKTEVALRAAFCAVAGGKQVAVLCPTTLLCEQHYQTFVDRFADWPVKIAEISRFKTAKESAQALQELAEGKIDVIIGTHKLIGKDVKFQRLGLVVIDEEHRFGVRQKETLKAMRAEVDVLTLTATPIPRTLAMSMEGLRDFSVIATAPQKRLAIKTFVSKFSDGIIREAVLRELKRGGQVYFLHNEVDTIENMREKLEKLVPEARIVIGHGQMNERELERVMRDFTQQRANLLLCTTIIETGIDNPHANTILINRSEKFGLAQLHQLRGRVGRSHHQAYAYLLVQDEKAMTKQAKQRLEAIQMSEELGSGFFLAMHDLEIRGAGEVLGDNQSGEMQEVGFNLFTEMLNRAVAHLKQGISTEINLRTPALLPDAYCPDVHERLTLYKRLANCENAEEIDTLQEELIDRFGELPLQGQSLLATHRLRILVKPLCIQKLDASTDQITLQFGP
>BETA13_P637611023 YP_160773 ebA6555 transcription-repair coupling protein Mfd [Azoarcus sp. EbN1]
ALAGSSDALAIAQLA-CLLLVTANPLDAQRLQDEIAWFAPALRTHLLPDWETLPYDSFSPHQDLISERLSTLYAVDVVLVPASTALYRMAPPAFLAAYTFFLKQGAKLDVDGLRNQMAIAGYTHVTQVVSPGEFSVRGGLIDLFPMGAALPFRIDLFDDEVESIKTFDPDTQRTVYPVPEIRMLPAREFPMDDAAPAGIEYYLPLFFTLFDYLPPDTAHRLKELLASGGRVLVLADAPGRRETISEFFGELGVGPLANGFLLPGIAIVTESELYATMEGWLRDLSELKPGDPVVHVSHGIGRYLGLIHMDL-GGRSEFLHLEYANGDKLYVPVSQLHVITRYAGADPDAVDLHRLGSGQWEKAKKKAALQVRDTAAELLALYAQRAARPGHRFDFKQHDLDAFAEGFGFETTPDQQAAIDAVVTDMKSGQPMDRLVCGDVGFGKTEVALRAAFVAVADGKQVVVLTPTTLLAEQHYQTFSDRFADFAIRIAELSRFKSAKEQTDSLKQLAEGKVDIIIGTHRLLQKDVKFKRLGLVIIDEEHRFGVRQKEMLKTLRSEIDILTLTATPIPRTLGLALEGLREFSVIATAPSRRLAIKTFVHRHSKGIIREAVLREFKRGGQVYFLHNEVDTIDNVRDELAELLPEARIVIGHGQLPERELERVMRTFTQQRANLLLCTTIIETGIDIPTANTIIINRADRFGLAQLHQLRGRVGRSHHQAYAYLLTDAHAKPSALAQKRLEAITMMEDLGSGFYLAMHDLEIRGAGEVLGENQSGEIQQVGFSLYTEMLKRAVRDLQAGVVSEINLHTPALLPNDYCPDVQERLTLYKRLANCESDDDLRNLQEELIDRFGELPPQTQALIETHRLRLLVKPFGVAKLDASEAQISVQFGS
>BETA13_P639786820 YP_933177 azo1673 transcription-repair coupling factor [Azoarcus sp. BH72]
ALAGSADALAIAQLA-MIAVITANPIDAQRLQDELAWVAPDLRSHLLPDWETLPYDSFSPHQDLISERLSTLYAVDVVLVPAPTALYRLAPPAYLAAYTFFMKQGDRLDVEALRKQMALAGYAHVTQVVSPGEFSVRGGLVDLYPMGSALPYRIDLFDDEVESIKTFDPDSQRTVYPTKEIRLLPAREFPLDDKAPAGIEYYLPLFFTLFDYLPTDVPHKFKAFQA-GERILLLADSPGRRETMAEFLAELGVAPLAAGFLLPDIAVVTEAELYATMEGWLRDLSELKLGDPVVHVSHGIGRYLGLIHMNL-GGDTEFLHLEYNGGDKLYVPVSQLHVITRYAGADPEAVDLHRLGSGQWEKAKKKAAMQVRDTAAELLALYAQRAARPGHRFDFKQHDLEAFAEAFGFETTPDQQAAIDAVVGDMKSGRPMDRLVCGDVGFGKTEVALRAAFIAVADGKQVVVLCPTTLLAEQHYQTFADRFADWPIKIAELSRFKSAKEQAEALKQLGEGKVDIIIGTHRLLQKDVLFKRLGLVIIDEEHRFGVRQKEALKQLRSEVDILTLTATPIPRTLGLAMEGLREFSVIATAPQKRLAIKTFVQRWSKGIVREAVLREFKRGGQVYFLHNEVDTIENVRNELAELLPEARIVVGHGQLPERELERVMRDFTQQRANLLLCTTIIETGINIPTANTIVINRADRFGLAQLHQLRGRVGRSHHQAYAYLLTDAHAKPTAQAQKRLEAISMMEELGSGFYLAMHDLEIRGAGEVLGENQSGEIQQVGFSLYTEMLKRAVKDLQAGVVSEINLHTPALLPTDYCPDVQERLTLYKRLANCESEDDLRALQEELIDRFGELPPQTVALIETHRLRLLVQSRGVQKLDASEAQISVQFGP
>BETA13_P643699240 YP_002355856 Tmz1t_2220 transcription-repair coupling factor [Thauera sp. MZ1T]
PLAGSADALAIAQLA-MLVVITANPLDAQRLQDEIAWVAPGLRAHLLPDWETLPYDSFSPHQDLISERLSTLYAIDIVLVPASTALYRMAPPGFLAAYTFFLKQGEKLDVEQFKAQMALAGYAHVTQVVSPGEFSVRGGLVDLFPMGSPLPFRIDLFDDEVESIKTFDPDTQRTVYPTKEIRLLPAREFPLDDKAPAGIEYYLPLFFTLLDYLPAETPHKLKAFLD-GFRVLLLSDSPGRRETMAEFFAELGVAPLARGFVLPALAVLTETELYAAMEGWLRDLSELKIGDPVVHVSHGIGRYLGLLHMNL-GGDTEFLHLEYNGGDKLYVPVSQLHVITRYAGADPEAVDLHRLGSGQWEKAKKKAAMQVRDTAAELLALYAQRAARPGHRFDFKQHDLEAFAEAFGFETTPDQQAAIDAVVADMKSGRPMDRLVCGDVGFGKTEVALRAAFIAVADGKQVVVLCPTTLLAEQHYQTFADRFADWPIKLAELSRFKSAKEQAEALQLLAEGKVDIIIGTHRLLQKDVIFKRLGLVIIDEEHRFGVRQKEALKQLRSEVDILTLTATPIPRTLGLAMEGLREFSVIATAPQKRLAIKTFVQPSSRGLIREAVLREFKRGGQVYFLHNEVDTIDNMKDDLEELLPEARIVVGHGQLPERELERVMRDFTQQRANLLLCTTIIETGINIPTANTIIINRADRFGLAQLHQLRGRVGRSHHQAYAYLLTQPGAKPSAQAQKRLEAIAMMEDLGSGFYLAMHDLEIRGAGEVLGENQSGEIQQVGFSLYTEMLKRAVKDLQAGVVSEINLHTPALLPTDYCPDVQERLTLYKRLANCEMEEDLRALQEELIDRFGELPAQTAALIETHRLRMLVKDYGVHKLDASDAQISVQFAK
>BETA13_P641721818 YP_785584 BAV1061 transcription-repair coupling factor [Bordetella avium 197N]
CPPGSGDGWLLADLARPIVVLTADPVHAQRLADEIPLFAPELRVRQLPDWETLPYDAFSPHQDLISERLHTLHALMILTVPVTTALYRLPPPSFLAAYTFSFRQRDKLDEQALRTQLTLANYNHVTQVTAPGEFCLRGGLIDLFPMGSALPYRLDMFDDEIESIRAFDVDTQRSLYPVGEVRLLPGREFPMDESAFAGVEYYLPLFFTLFDYLNSATLGKLRALVGSGARVLLCADSAGRRETLFQMLAELTIAPMAAGFAENGLVFLTENDLYGSVEAMVRDLAELREGDPVVHAQHGIGRYHGLINMDM-GGEMEFLHLEYASGATLYVPVSQLHVIARYSGADPEAAPLHQLGSGQWDKARKKAAKQVRDTAAELLALYAQRAAREGYAFNLPLSDYESFAEGFGFEETVDQSAAIQAVIMDMTSGKPMDRLVCGDVGFGKTEVALRAAFLAVANGKQVALLCPTTLLAEQHAQTFSDRFADWPVRVVELSRFRSAKEVAAAVEGINDGRVDIVIGTHKILSKEVRFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMSLEGIRDFSVIATAPQKRLAIKTFVRREDGSTIREALLRELKRGGQAYFLHNEVETIHNRRARLEELVPEARIGVAHGQMPERELEQVMKGFYQQRYNVLLCTTIIETGIDVPSANTIVIHRADRFGLAQLHQLRGRVGRSHHQAYAYLLTPGEDAITANAKKRLEAIQAMEELGSGFYLAMHDLEIRGTGEILGDSQSGNIQEVGFSMYNEMLSEAVRALKSGLACEVNLHAPALLPSDYCPDVHGRLAIYKRLSHAQDEDDLIRIQEELIDRFGKLPEAAQTLLMTHRLRLMGEPLGIVKIDVSEAQALLQFGA
>BETA13_P641362412 YP_001630302 Bpet1694 transcription-repair coupling factor [Bordetella petrii]
RPPGSADAWLLADLARPLVVLTAAPLEAQRLADEIPQFAPDLRVRQLPDWETLPYDAFSPHQDLVSQRLHTLHALDVLLVPVTTALYRLAPPSFLAAYTFSFKQKDRLDEAALRAQLTLANYTHVTQVTAPGEFCLRGGLIDLFPMGSAVPYRLDLFDDEIESIRSFDVDTQRSLYPVREVQLLPGREFPMDEAPFAGVEYYLPLFFTLFDYLPAEAIARLRALLSSESRVLLCADSAGRRETLVQMLAELAAAPLSTGFNIPSLTFLTENDLYHAVEAMVRDLSELRAGDPVVHAQHGIGRYHGLVNMDM-GGEMEFLHLEYASGSTLYVPVSQLHVIARYSGADPEAAPLHQLGSGQWDKARRKAARQVRDTAAELLALYAQRAAREGYVFKLPLNDYEAFAEGFGFEETADQSAAIQAVIADMTSGRPMDRLVCGDVGFGKTEVALRAAFLAVANGKQVALLCPTTLLAEQHAQTFSDRFADWPVRVVELSRFRSSKEVADAVQGINDGRVDIVIGTHKILSKDVRFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMSLEGIRDFSVIATAPQKRLAIKTFVRREDGSTIREALLRELKRGGQAYFLHNEVETIHNRRARIEELVPEARIAVAHGQMPERELEQVMKGFYQQRYNVLLCTTIIETGIDVPTANTIVIHRADRFGLAQLHQLRGRVGRSHHQAYAYLLTPGEDAITSNAKKRLEAIQAMEELGSGFYLAMHDLEIRGTGEVLGESQSGNIQEIGFSMYNEMLNEAVRALKAGLACEVNLHAPALLPADYCADVHARLGIYKRLAHAANEDDLIRIQEELIDRFGKLPEAAQILLTTHRLRLAAQPLGIVKIDASETQALLQFGP
>BETA13_P637110388 NP_885532 BPP3367 transcription-repair coupling factor [Bordetella parapertussis 12822]
RPPGSGDGWLLADLARPLVVLTADPLEAQRLADEIPQFAPELRVRQLPDWETLPYDAFSPHQDLISQRLRTLHALDILTVPVTTALYRLAPPAFLAAYTFSFKQKDRLDEAALRAQLTLANYSHVTQVTAPGEFCLRGGLIDLFPMGSVVPYRLDLFDDEIESIRSFDVDTQRSLYPVGEVQLLPGREFPMDEEAFAGIEYYLPLFFTLFDYLSADTIARLRALLATGDRVLLCADSAGRRETLAQMLGELAVAPLSAGFGAPGLLFLTENDLYHAVEAMVRDLAELRAGDPVVHAQHGIGRYHGLVNMDM-GGEMEFLHLEYASGSTLYVPVSQLHVIARYSGADPDAAPLHQLGSGQWDKARRKAARQVRDTAAELLALYAQRAAREGYAFKLPMSDYEAFAEGFGFEETPDQAAAIQAVIMDMTSGRPMDRLVCGDVGFGKTEVALRAAFLAVANGKQVALLCPTTLLAEQHAQTFSDRFADWPVRVVELSRFRSAKEVAAAVEGINDGRVDIVIGTHKILSKDVRFKRLGLVIIDEEHRFGVRQKETLKALRAEVDVLTLTATPIPRTLGMSLEGIRDFSVIATAPHKRLAIKTFVRREDGSTIREALLRELKRGGQVYFLHNEVETIHNRRARLEELVPEARIAVAHGQMPERELEQVMKGFYQQRHNVLLCTTIIETGIDIPTANTIVIHRADRFGLAQLHQLRGRVGRSHHQAYAYLLTPGEDAITNNAKKRLEAIQAMEELGSGFYLAMHDLEIRGTGEILGDSQSGNIQEVGFSMYNEMLNEAVRALKAGLACEVNLHAPALLPSDYCPDVHGRLAIYKRLSHADGEDDLIRIQEELIDRFGKLPEAAQTLLATHRLRLAAQPLGIVKIDASETQALLQFGA
>BETA13_P637105965 NP_890353 BB3818 transcription-repair coupling factor [Bordetella bronchiseptica RB50]
RPPGSGDGWLLADLARPLVVLTADPLEAQRLADEIPQFAPELRVRQLPDWETLPYDAFSPHQDLISQRLRTLHALDILTVPVTTALYRLAPPAFLAAYTFSFKQKDRLDEAALRAQLTLANYSHVTQVTAPGEFCLRGGLIDLFPMGSVVPYRLDLFDDEIESIRSFDVDTQRSLYPVGEVQLLPGREFPMDEEAFAGIEYYLPLFFTLFDYLAADTIARLRALLATGDRVLLCADSAGRRETLAQMLGELAVAPLSAGFCVPGLLFLTENDLYHAVEAMVRDLAELRAGDPVVHAQHGIGRYHGLVNMDM-GGEMEFLHLEYASGSTLYVPVSQLHVIARYSGADPDAAPLHQLGSGQWDKARRKAARQVRDTAAELLALYAQRAAREGYAFKLPMSDYEAFAEGFGFEETPDQAAAIQAVIMDMTSGRPMDRLVCGDVGFGKTEVALRAAFLAVANGKQVALLCPTTLLAEQHAQTFSDRFADWPVRVVELSRFRSAKEVAAAVEGINDGRVDIVIGTHKILSKDVRFKRLGLVIIDEEHRFGVRQKETLKALRAEVDVLTLTATPIPRTLGMSLEGIRDFSVIATAPQKRLAIKTFVRREDGSTIREALLRELKRGGQVYFLHNEVETIHNRRARLEELVPEARIAVAHGQMPERELEQVMKGFYQQRHNVLLCTTIIETGIDIPTANTIVIHRADRFGLAQLHQLRGRVGRSHHQAYAYLLTPGEDAITNNAKKRLEAIQAMEELGSGFYLAMHDLEIRGTGEILGDSQSGNIQEVGFSMYNEMLNEAVRALKAGLACEVNLHAPALLPSDYCPDVHGRLAIYKRLSHADGEDDLIRIQEELIDRFGKLPEAAQTLLATHRLRLAAQPLGIVKIDASETQALLQFGA
>BETA13_P637112189 NP_879674 BP0864 transcription-repair coupling factor [Bordetella pertussis Tohama I]
RPPGSGDGWLLADLAGPLVVLTADPLEAQRLADEIPQFAPELRVRQLPDWETLPYDAFSPHQDLISQRLRTLHALDILTVPVTTALYRLAPPAFLAAYTFSFKQKDRLDEAALRAQLTLANYSHVTQVTAPGEFCLRGGLIDLFPMGSVVPYRLDLFDDEIESIRSFDVDTQRSLYPVGEVQLLPGREFPMDEEAFAGIEYYLPLFFTLFDYLAADTIARLRALQ-TGDRVLLCADSAGRRETLAQMLGELAVAPLSAGFCVPGLLFLTENDLYPGVEAMVRDLAELRAGDPVVHAQHGIGRYHGLVNMDM-GGEMEFLHLEYASGSTLYVPVSQLHVIARYSGADPDAAPLHQLGSGQWDKARRKAARQVRDTAAELLALYAQRAAREGYAFKLPMSDYEAFAEGFGFEETPDQAAAIQAVIMDMTSGRPMDRLVCGDVGFGKTEVALRAAFLAVANGKQVALLCPTTLLAEQHAQTFSDRFADWPVRVVELSRFRSAKEVAAAVEGINDGRVDIVIGTHKILSKDVRFKRLGLVIIDEEHRFGVRQKETLKALRAEVDVLTLTATPIPRTLGMSLEGIRDFSVIATAPQKRLAIKTFVRREDGSTIREALLRELKRGGQVYFLHNEVETIHNRRARLEELVPEARIAVAHGQMPERELEQVMKGFYQQRHNVLLCTTIIETGIDIPTANTIVIHRADRFGLAQLHQLRGRVGRSHHQAYAYLLTPGEDAITNNAKKRLEAIQAMEELGSGFYLAMHDLEIRGTGEILGDSQSGNIQEVGFSMYNEMLNEAVRALKAGLACEVNLHAPALLPSDYCPDVHGRLAIYKRLSHADGEDDLIRIQEELIDRFGKLPEAAQTLLATHRLRLAAQPLGIVKIDASETQALLQFGA
>BETA13_P640169220 YP_001100188 HEAR1914 transcription-repair ATP-dependent coupling factor [Herminiimonas arsenicoxydans]
AVHGSADAYVLAQAAKMLAVVVANASDAQRLLAEIPWFTEKPRCHLLPDWETLPYDAFSPHQDLVSERLATLYEVDVLIVPATTALVRMAPPAFLASYTFFFKQGEKLDEAKLKAQLQLAGYSPVKQVMSPGEYSVRGGLIDIFPMGAVLPYRIDLFGDTIDTIRTFDADTQRSLYPVREVRLLPAREFPMDEEASAGIEYYLPLFFTLFDYLPPDTTVNLRSWLQTDKRVLICAESNGRRETLQQYFNELGVAPMHAGFELGGLAFITETELYAGVEAMVRDLSELKIGDPVVHVNHGIGRYMGLTSMDL-GGETEFLHLEYAKDTKLYVPVSQLHVISRYSGASPEDAPLHALGSGQWEKAKRRAAEKIRDTAAELLNLYARRALREGHSFEYSAHDYAAFADSFGFEETVDQAAAINAVIQDMTSGKPMDRLICGDVGFGKTEVALRAAFIAVLGGKQVAILAPTTLLAEQHAQTFADRFADWPVRIAELSRFRSGKEITQAMKGMADGTIDIVIGTHKLLSADTKFSRLGLVIIDEEHRFGVRQKETLKALRAEVDVLTLTATPIPRTLGMALEGLRDFSIIATAPQKRLAIKTFVRSENASVIREACLRELKRGGQVYFLHNEVETIENRKAMLEELMPEARIGVAHGQLHERDLERIMRDFVAQRFNILLCTTIIETGIDVPTANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDVQGLSKLAQRRLDAIQQMEELGSGFYLAMHDLEIRGAGEVLGDNQSGEMTEIGFQLYSDMLNEAVRSLKNGTTTEINLHVPALLPSTYCGDVHERLSIYKRLANCKTQDAVNDLQEELIDRFGKLPDAAQALVETHRLRVAAVPVGIIKIDAHAESATLQFEP
>BETA13_P640816852 YP_001353098 mma_1408 transcription-repair coupling factor (superfamily II helicase) [Janthinobacterium sp. Marseille]
PVHGSADAFVLAQAAKMLTVVVANASDAQRLLAEIPWFGSELRCHLLPDWETLPYDAFSPHQDLVSERLATLYEVDVLIVPATTALVRMAPPAFLASYTFFFKQGETLDEAKLKAQLQLAGYSPVKQVMSPGEYSVRGGLIDIYPMGSVLPYRIDLFGDTIDSIRTFDADSQRSLYPVKEVRLLPAREFPMDEEASAGIEYYLPLFFTLFDYLPADTTVNLRAYDK---RVMICAESNGRRETLQQYFNELGVAPMHAGFELGGLAFITETELYAGVESMVRDLSELKIGDPVVHVNHGIGRYMGLTSMDL-GGETEFLHLEYAKDTKLYVPVSQLHVISRYSGASPEDAPLHALGSGQWEKAKRRAAEKIRDTAAELLNLYARRALREGHSFEYSAHDYEAFAESFGFEETADQAAAINAVIKDMTSGKPMDRLICGDVGFGKTEVALRAAFVAVLGGKQVAILAPTTLLAEQHAQTFADRFADWPVRIAELSRFRTAKEVTQAIKGMADGTIDIVIGTHKLLSGDIKFSRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSIIATAPQKRLAIKTFVRSENDSVIREACLRELKRGGQVYFLHNEVETIQNRKAMLEELMPEARIGVAHGQLHERDLERIMRDFVAQRFNILLCTTIIETGIDVPTANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDVQGLSKLAQRRLDAIQQMEELGSGFYLAMHDLEIRGAGEVLGDNQSGEMSEIGFQLYSDMLNEAVRSLKNGSTTEINLHVPALLPNTYCGDVHERLSIYKRLANCKTADAINDLQEELIDRFGKLPDAAQALVETHRLRVAAIPVGIIKIDAHAESATLQFEP
>BETA13_P643880469 YP_002911187 bglu_1g13320 Transcription-repair coupling factor [Burkholderia glumae BGR1]
GAPGSAEALAIARYLRLLAVICANPADAQRLSQEIGFFAPEARVRLLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFLAAYTFAFTQGERLDESKFKAQLTLAGYEHVSQVVRPGEYCVRGSLIDLFPMGSPLPYRIDLFDDQIDSIRAFDPDTQRSLYPVRDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPEHAHASFRRYLQTPNRVLFTVESAGRRETIAQLFAELGVAPLASGFAVPGYAIVTETELYGSVDAMVRDLSELKVGDPVVHAQHGIGRYMGLVSMDL-GGETEFLHLEYAGESKLYVPVSQLHVISRYSGADPDSAPLHQLGSGQWERAKRKAAQQIRDTAAELLNLYARRAAREGHAFALEPRDYVKFAESFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFIDRFADWPVRVAELSRFKSTKEVNAAIRQINEGSVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEESVIREAMLRELKRGGQVYFLHNEVETIENRKTMLEALVPEARIAIAHGQMHERELERVMREFVAQRANVLLCTTIIETGIDVPSANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDPQALTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTEMLNDAVKALKNGATTEINLHAPAILPADYCGDVQERLSLYKRLANCEDGDAIDAIQEELIDRFGKLPPQAHALVETHRLRLAAKPLGISKIDASEAAIGLQFVP
>BETA13_P637841757 YP_442612 BTH_I2088 transcription-repair coupling factor [Burkholderia thailandensis E264]
GAHGSADALVIARYLRLLAVICANAVDAQRLAQELRYFAPDARVRVLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFLAAYTFAFTQGERLDEAKLKAQLTLAGYEHVSQVVRPGEYCVRGSLIDLFPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVRDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPENAQAAFAAYLETNNRVLFTVESAGRRETIAQLFAELGVAPLASGFAVPGYAIVTETELYGAVDAMVRDLSELKVGDPVVHAQHGIGRYMGLVSMDL-GGDTEFLHLEYAGDSKLYVPVAQLHVISRYSGADPDSAPLHALGSGQWERAKRRAAQQIRDTAAELLNLYARRAAREGHAFALDPRDYVKFADSFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFIDRFADWPVKIVELSRFKSTKEVNAAIQQINDGSVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEESVIREAMLRELKRGGQVYFLHNEVETIENRRAMLEELVPEARIVIAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDPQALTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTEMLNDAVKALKNGATTEINLHAPAILPADYCGDVQERLSLYKRLANCEHGDAIDGIQEELIDRFGKLPPQAHALVETHRLRLAAKPLGIMKIDASEAAIGLQFVP
>BETA13_P637562185 YP_103135 BMA1491 transcription-repair coupling factor [Burkholderia mallei ATCC 23344]
GAHGSADALVIARYLRLLAVICANAVDAQRLAQELAYFAPDARVRVLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFLAAYTFSFTQGERLDEAKLKAQLTLAGYEHVSQVVRPGEYCVRGSLIDLFPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVRDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPERAQAAFAAYLETKNRVLFTVESAGRRETIAQLFAELGVAPLANGFAVPGYAIVTETELYGAVDAMVRDLSELKVGDPVVHAQHGIGRYMGLVSMDL-GGDTEFLHLEYAGDSKLYVPVAQLHVISRYSGADPDSAPLHALGSGQWERAKRRAAQQIRDTAAELLNLYARRAAREGHAFGLDPRDYVKFADSFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFADRFADWPVRIAELSRFKTAKEVNAAIAQINEGSVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEESVIREAMLRELKRGGQVYFLHNEVETIENRKAMLEELVPEARIVIAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDPQALTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTEMLNDAVKALKNGATTEINLHAPAILPADYCGDVQERLSLYKRLANCEHGDAIDGIQEELIDRFGKLPPQAHALVETHRLRLAAKPLGIVKIDASEAAIGLQFVP
>BETA13_P637728969 YP_333905 BURPS1710b_2513 transcription-repair coupling factor [Burkholderia pseudomallei 1710b]
GAHGSADALVIARYLHLLAVICANAVDAQRLAQELAYFAPDARVRVLPDWETLPYDTFSPHQDLVSERLATLHDLGILLVPATTALYRMPPASFLAAYTFSFTQGERLDEAKLKAQLTLAGYEHVSQVVRPGEYCVRGSLIDLFPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVRDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPERAQAAFAAYLETKNRVLFTVESAGRRETIAQLFAELGVAPLANGFAVPGYAIVTETELYGAVDAMVRDLSELKVGDPVVHAQHGIGRYMGLVSMDL-GGDTEFLHLEYAGDSKLYVPVAQLHVISRYSGADPDSAPLHALGSGQWERAKRRAAQQIRDTAAELLNLYARRAAREGHAFGLDPRDYVKFADSFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFADRFADWPVRIVELSRFKTAKEVNAAIAQINEGSVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEESVIREAMLRELKRGGQVYFLHNEVETIENRKAMLEELVPEARIVIAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDPQALTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTEMLNDAVKALKNGATTEINLHAPAILPADYCGDVQERLSLYKRLANCEHGDAIDGIQEELIDRFGKLPPQAHALVETHRLRLAAKPLGIVKIDASEAAIGLQFVP
>BETA13_P640128287 YP_001059391 BURPS668_2359 transcription-repair coupling factor [Burkholderia pseudomallei 668]
GAHGSADALVIARYLHLLAVICANAVDAQRLAQELAYFAPDARVRVLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFLAAYTFSFTQGERLDEAKLKAQLTLAGYEHVSQVVRPGEYCVRGSLIDLFPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVRDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPERAQAAFAAYLETKNRVLFTVESAGRRETIAQLFAELGVAPLANGFAVPGYAIVTETELYGAVDAMVRDLSELKVGDPVVHAQHGIGRYMGLVSMDL-GGDTEFLHLEYAGDSKLYVPVAQLHVISRYSGADPDSAPLHALGSGQWERAKRRAAQQIRDTAAELLNLYARRAAREGHAFGLDPRDYVKFADSFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFADRFADWPVRIVELSRFKTAKEVNAAIAQINEGSVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEESVIREAMLRELKRGGQVYFLHNEVETIENRKAMLEELVPEARIVIAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDPQALTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTEMLNDAVKALKNGATTEINLHAPAILPADYCGDVQERLSLYKRLANCEHGDAIDGIQEELIDRFGKLPPQAHALVETHRLRLAAKPLGIVKIDASEAAIGLQFVP
>BETA13_P640098554 YP_001029254 BMA10299_A3318 transcription-repair coupling factor [Burkholderia mallei NCTC 10229]
GAHGSADALVIARYLHLLAVICANAVDAQRLAQELAYFAPDARVRVLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFLAAYTFSFTQGERLDEAKLKAQLTLAGYEHVSQVVRPGEYCVRGSLIDLFPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVRDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPERAQAAFAAYLETKNRVLFTVESAGRRETIAQLFAELGVAPLANGFAVPGYAIVTETELYGAVDAMVRDLSELKVGDPVVHAQHGIGRYMGLVSMDL-GGDTEFLHLEYAGDSKLYVPVAQLHVISRYSGADPDSAPLHALGSGQWERAKRRAAQQIRDTAAELLNLYARRAAREGHAFGLDPRDYVKFADSFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFADRFADWPVRIAELSRFKTAKEVNAAIAQINEGSVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEESVIREAMLRELKRGGQVYFLHNEVETIENRKAMLEELVPEARIVIAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDPQALTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTEMLNDAVKALKNGATTEINLHAPAILPADYCGDVQERLSLYKRLANCEHGDAIDGIQEELIDRFGKLPPQAHALVETHRLRLAAKPLGIVKIDASEAAIGLQFVP
>BETA13_P642671998 YP_001946372 BMULJ_01919 transcription-repair coupling factor [Burkholderia multivorans ATCC 17616]
GTHGSADALAIARYLRLLAVICANAVDAQRLSQEIGYFAPDARVRLLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFMAAYTFAFAQGERLDEAKLKSQLTLAGYEHVSQVVRPGEYCVRGSLIDLFPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVRDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPQDAHAALRTFVESGKRVLLTVESAGRRETILQLLAELGVAPLANGFAVPGYAIVTETELYGAVDAMVRDLSELKVGDPVVHAQHGIGRYMGLVSMDL-GGETEFLHLEYAGDSKLYVPVAQLHVISRYSGADPDSAPLHALGSGQWERAKRKAAQQIRDTAAELLNLYARRAAREGHAFALDPRDYVKFAESFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFADRFADWPVRIVELSRFKTTKEVNAAIAQINEGSVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEESVIREAMLRELKRGGQVYFLHNEVETIENRKAMLEELVPEARIVIAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDPQALTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTEMLNDAVKALKNGATTEINLHAPAILPADYCADVQERLSLYKRLANCEHADAIDGIQEELIDRFGKLPPQAQALVETHRLRLAAKPLGITKIDASEAAIGLQFVP
>BETA13_P637763554 YP_369493 Bcep18194_A5255 transcription-repair coupling factor [Burkholderia sp. 383]
GAHGSADALAIARYLRLLAVICANAVDAQRLSQEIRYFSPDARVRLLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFMAAYTFAFAQGERLDEAKLKAQLTLAGYEHVSQVVRPGEYCVRGSLIDLYPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVRDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPQDAHASLRTFVESGKRVLLTVESAGRRETILQLLAELGVAPLANGFAVPDYAVVTETELYGAVDAMVRDLSELKVGDPVVHAQHGIGRYMGLVSMDL-GGETEFLHLEYSGDSKLYVPVAQLHVISRYSGADPDSAPLHALGSGQWERAKRKAAQQIRDTAAELLNLYARRAAREGHAFSLDPRDYVKFAESFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVLGGKQVALLSPTTLLAEQHTQTFADRFADWPVRIVELSRFKTAKEVNAAIAQINEGSVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEESVIREAMLRELKRGGQVYFLHNEVETIENRKAMLEALVPEARIVIAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTIIMHRSDKFGLAQLHQLRGRVGRSHHQAYAYLLVHDPQALTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTDMLNDAVKALKNGATTEINLHAPAILPADYCADVQERLSLYKRLANCEHGDAIDGIQEELIDRFGKLPPQAHALVETHRLRIAAKPLGIVKIDASEVAIGLQFEP
>BETA13_P638019422 YP_625972 Bcen_6135 transcription-repair coupling factor [Burkholderia cenocepacia AU 1054]
GAHGSADALAIARYLRLLAVICANAVDAQRLSQEIRYFSPDARVRLLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFMAAYTFAFAQGERLDEAKLKAQLTLAGYEHVSQVVRPGEYCVRGSLIDLYPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVRDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPQDAHASLRTFVESGKRVLLTVESAGRRETILQLLAELGVAPLANGFAVPGYAIVTETELYGAVDAMVRDLSELKVGDPVVHAQHGIGRYMGLVSMDL-GGETEFLHLEYSGDSKLYVPVAQLHVISRYSGADPDSAPLHALGSGQWERAKRKAAQQIRDTAAELLNLYARRAAREGHAFSLDPRDYVKFAESFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVLGGKQVALLSPTTLLAEQHTQTFADRFADWPVRIVELSRFKTAKEVSAAIAQINEGSVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEESVIREAMLRELKRGGQVYFLHNEVETIENRKAMLEALVPEARIVIAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDPQSLTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTDMLNDAVKALKNGATTEINLHAPAILPADYCADVQERLSLYKRLANCEHGDAIDGIQEELIDRFGKLPPQAHALVETHRLRIAAKPLGIVKIDASEVAIGLQFEP
>BETA13_P643350919 YP_002231144 BCAL2017 transcription-repair coupling factor [Burkholderia cenocepacia J2315]
GAHGSADALAIARYLRLLAVICANAVDAQRLSQEIRYFSPDARVRLLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFMAAYTFAFAQGERLDEAKLKAQLTLAGYEHVSQVVRPGEYCVRGSLIDLYPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVRDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPQDAHASLRTFVESGKRVLLTVESAGRRETILQLLAELGVAPLANGFAVPGYAIVTETELYGAVDAMVRDLSELKVGDPVVHAQHGIGRYMGLVSMDL-GGETEFLHLEYSGDSKLYVPVAQLHVISRYSGADPDSAPLHALGSGQWERAKRKAAQQIRDTAAELLNLYARRAAREGHAFSLDPRDYVKFAESFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVLGGKQVALLSPTTLLAEQHTQTFADRFADWPVRIVELSRFKTAKEVNAAIAQINEGSVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEESVIREAMLRELKRGGQVYFLHNEVETIENRKAMLEALVPEARIVIAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDPQSLTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTDMLNDAVKALKNGATTEINLHAPAILPADYCADVQERLSLYKRLANCEHGDAIDGIQEELIDRFGKLPPQAHALVETHRLRIAAKPLGIVKIDASEVAIGLQFEP
>BETA13_P641681618 YP_001808557 BamMC406_1859 transcription-repair coupling factor [Burkholderia ambifaria MC40-6]
GTHGSADALAIARYLRLLAVICANAVDAQRLSQELRYFSPDARVRLLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFMAAYTFAFAQGERLDEAKLKAQLTLAGYEHVSQVVRPGEYCVRGSLIDLYPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVRDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPQDAHAALRTFVESGKRVLLTVESAGRRETILQLLAELGVAPLANGFVVPGYAIVTETELYGAVDAMVRDLSELKVGDPVVHAQHGIGRYMGLVSMDL-GGETEFLHLEYAGDSKLYVPVAQLHVISRYSGADPDSAPLHALGSGQWERAKRKAAQQIRDTAAELLNLYARRAAREGHAFALDPRDYVKFAESFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFVDRFAEWPVRIVELSRFKTTKEVNAAIAQINEGTVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEESVIREAMLRELKRGGQVYFLHNEVETIENRRAMLEELVPEARIVIAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDPQSLTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTDMLNDAVKALKNGATTEINLHAPAILPADYCADVQERLSLYKRLANCEHGDAIDGIQEELIDRFGKLPPQAHALVETHRLRLAAKPLGIVKIDASEAAIGLQFEP
>BETA13_P638149749 YP_773822 Bamb_1932 transcription-repair coupling factor [Burkholderia cepacia AMMD]
GTHGSADALAIARYLRLLAVICANAVDAQRLSQELRYFSPDARVRLLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFMAAYTFAFAQGERLDEAKLKAQLTLAGYEHVSQVVRPGEYCVRGSLIDLYPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVREVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPQDAHAALRTFVESGKRVLLTVESAGRRETILQLLAELGVAPLASGFAVPGYAIVTETELYGAVDAMVRDLSELKVGDPVVHAQHGIGRYMGLVSMDL-GGETEFLHLEYAGDSKLYVPVAQLHVISRYSGADPDSAPLHALGSGQWERAKRKAAQQIRDTAAELLNLYARRAAREGHAFALDPRDYVKFAESFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFVDRFADWPVRIVELSRFKTTKEVNAAIAQINEGTVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEESVIREAMLRELKRGGQVYFLHNEVETIENRRAMLEELVPEARIVIAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDPQSLTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTDMLNDAVKALKNGATTEINLHAPAILPADYCADVQERLSLYKRLANCEHGDAIDGIQEELIDRFGKLPPQAHALVETHRLRLAAKPLGIVKIDASEAAIGLQFEP
>BETA13_P640187638 YP_001119709 Bcep1808_1871 transcription-repair coupling factor [Burkholderia vietnamiensis G4]
GAHGSADALAIARYLRLLAVICANAVDAQRLSQELRYFSPDARVRLLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFMAAYTFAFAQGERLDEAKLKAQLTLAGYEHVSQVVRPGEYCVRGSLIDLYPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVRDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPQAAHAALRTFVESGKRVLLTVESAGRRETILQLLAELGVAPLASGFAVPAYAIVTETELYGAVDAMVRDLSELKVGDPVVHAQHGIGRYMGLVSMDL-GGETEFLHLEYAGDSKLYVPVAQLHVISRYSGADPDSAPLHALGSGQWERAKRKAAQQIRDTAAELLNLYARRAAREGHAFALDPRDYVKFAESFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFADRFADWPVRIVELSRFKTAKEVNAAIAQINEGSVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEESVIREAMLRELKRGGQVYFLHNEVETIENRKAMLEALVPEARIVIAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTIIMHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDPQSLTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTDMLNDAVKALKNGATTEINLHAPAILPADYCADVQERLSLYKRLANCEHGDAIDGIQEELIDRFGKLPPQAQALVETHRLRLAAKPLGIVKIDASEVAIGLQFEP
>BETA13_P642592773 YP_001857232 Bphy_0997 transcription-repair coupling factor [Burkholderia phymatum STM815]
GTHGSSDALLIARYHKLLAVVCASAVDAQRLSQELAFFAPDARIRLLPDWETLPYDSFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFMAAYTFSFSQGERLDEAKLKAQLTLAGYEHVSQVVRPGEYCVRGSLIDLFPMGSPLPYRIDLFDDQVDSIRAFDPDSQRSLYPVKDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPEAAQSALRAWLDTPNRVLLAAESAGRRETIAQLLADLSVAPLSNGFAIPSVAFLTETELYGPVDSMVRDLSELKVGDPVVHSQHGIGRYMGLVTMDL-GGETEFLHLEYQGDSKLYVPVSQLHVISRYSGADPDSAPLHALGSGQWEKAKRKAAQQIRDTAAELLNLYARRAMREGHAFPLDPRDYVKFAESFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFTDRFSDWPVRIAELSRFKTGKEVSASIQQINEGSVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEDGVIREAMLRELKRGGQVYFLHNEVETIENRRQMLEALVPEARIAVAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTILIHRADKFGLAQLHQLRGRVGRSHHQAYSYLLVHDPQGLTKQAQRRLEAIQQMEELGAGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTDMLNDAVKALKNGATTEINLHTPAILPADYCGDVQERLSLYKRLANCEHNDSIDGIQEELIDRFGKMPPQAHALVETHRLRLAAKPLGISKIDAGEAVIGLQFIP
>BETA13_P642621437 YP_001895506 Bphyt_1874 transcription-repair coupling factor [Burkholderia phytofirmans PsJN]
GTHGSSDALLIARYHRLLAVVCESAVDAQRLAQEIGFFAPEARVRLLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFLAAYTFSFAQGERLDEARIKAQLTLAGYEHVSQVVRPGEYCVRGSLLDLYPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVKDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPEGAQAGLRAYLDTPNRVLFAAESAGRRETLLQLLADLGVAPLANGFAVPVIAIITETELYGPVDSMVRDLSELKVGDPVVHSQHGIGRYMGLVTMDL-GGETEFLHLEYAGDSKLYVPVAQLHVISRYSGADPESAPLHSLGSGQWEKAKRKAAQQIRDTAAELLNLYARRALRQGHAFALEPKDYVKFAESFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFSDRFSDWPVRIAELSRFKSTKEVSAAIQQINEGTVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEDSVIREAMLRELKRGGQVYFLHNEVETIENRRQMLEALVPEARIAVAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTILIHRADKFGLAQLHQLRGRVGRSHHQAYSYLLVHDPQGLTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTDMLNDAVKALKEGATTEINLHASAILPADYCGDVQERLSLYKRLANCEHNDSIDGIQEELIDRFGKLPPQAHALVETHRLRLAAKPLGISKIDAGEAVIGLQFIP
>BETA13_P637947325 YP_558709 Bxe_A2313 Transcription-repair coupling factor [Burkholderia xenovorans LB400]
GTHGSSDALLIARYHRLLAVVCESAVDAQRLAQEIGFFAPEARVRLLPDWETLPYDTFSPHQDLVSERLATLHDLDILLVPATTALYRMPPASFLAAYTFSFSQGERLDEAKLKSQLTLAGYEHVSQVVRPGEYCVRGSLLDLYPMGSPLPYRIDLFDDQVDSIRAFDPDTQRSLYPVKDVRLLPGREFPFDEAPSAGIEYYLPLFFTLFHYLPEGAQAALRAYLDTPNRVLFATESAGRRETLLQLLADLGVAPLANGFAVPVIAIITETELYGPVDSMVRDLSELKLGDPVVHSQHGIGRYMGLVTMDL-GGETEFLHLEYAGDSKLYVPVAQLHVISRYSGADPESAPLHSLGSGQWEKAKRKAAQQIRDTAAELLNLYARRAARSGHAFALEPKDYVKFAESFGFEETPDQAAAIAAVIGDMTSGKPMDRLVCGDVGFGKTEVALRAAFIAVMGGKQVALLSPTTLLAEQHTQTFTDRFSDWPVRIAELSRFKSTKEVNAAIHQINEGTVDIVIGTHKLLSSDVQFKRLGLVIIDEEHRFGVRQKEALKALRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEDSVIREAMLRELKRGGQVYFLHNEVETIENRRQMLEALVPEARIAVAHGQMHERELERVMRDFVAQRANVLLCTTIIETGIDVPSANTILIHRADKFGLAQLHQLRGRVGRSHHQAYSYLLVHDPQGLTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGTGEVLGDKQSGEIHEIGFQLYTDMLNDAVKALKEGATTEINLHAPAILPADYCGDVQERLSLYKRLANCEHNDSIDSIQEELIDRFGKLPPQAHALVETHRLRLAAKPLGILKIDAGETVIGLQFIP
>BETA13_P642625468 YP_001899471 Rpic_1904 transcription-repair coupling factor [Ralstonia pickettii 12J]
GLQGAADALLLARYLRMLAVVCANAVDAQRLAEELRWFAPQARVKLLPDWETLPYDNFSPHQDLISERLATLHDLDILLVPASTALQRVAPPSFLAAYTFFFKKGEKLDEAALKAQFTLAGYEHVSAVMRPGEYSVRGGLIDLFPMGSPLPYRLDLFGDEIETIRSFDPDTQRSLYPVNEVRLLPGREFPMDEAPSAGIEYYLPLFFTLFDYLPGTTHVNLESFMRSNCRVMICAESAGRRETLAQMLAALGVAPLYQGFILGDIALITETELYAQVDSMVRDLAELKIGDPVVHSEHGIGRYQGLVSIDM-GGEEEFLHLDYDKGSKLYVPVHQLHVISRYSGADPETAPLHSLGSGQWEKAKRKAAQQIRDTAAELLNLYARRALRQGFAFPLTPEDYATFAESFGFEETPDQAAAIAAVIADMTSGKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAILAPTTLLAEQHYQTLVDRFADWPVRIAEISRFKNKKEIDAAIEAINAGTIDIVIGTHKLLSPDVKFDRLGLVIIDEEHRFGVRQKETLKTLRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFLRREEDGVLREAILRELKRGGQVYFLHNEVETIENKRAKLEELIPEARVVVAHGQMHERELERVMRDFVAQRANILLCTTIIETGIDVPTANTILIHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDVDGLTKQAQRRLEAIQQMEELGAGFYLAMHDLEIRGAGEVLGDKQSGEISEIGFQLYTDMLNQAVKSLKAGATTEINLGTPALLPQDYCGDVQERLSLYKRLANCESSETIDNIQEELIDRFGKLPPQAQSLIETHRLRIAAAPLGIRKIDTGANAVTLQFIP
>BETA13_P637238031 NP_519763 RSc1642 PROBABLE TRANSCRIPTION-REPAIR COUPLING FACTOR PROTEIN [Ralstonia solanacearum GMI1000]
GLQGSADALLLARYLHMLAVVCANAVDAQRLADELRWFAPQARVKLLPDWETLPYDNFSPHQDLISERLATLHDLDLLLVPASTALQRIAPPSFLAAYTFFFKKGERLDEAALKAQFTLAGYEHVSAVMRPGEYSVRGGLIDLFPMGSPMPYRLDLFGDEIDTIRAFDPDTQRSLYPVNEVRLLPGREFPMDEAPSAGIEYYLPLFFTLFDYLPASAHVNLESFLTRGNRVMICAESAGRRETLAQMLAALGVAPLYQGFILGDIAFITETELYAQVDAMVRDLAELKIGDPVVHSEHGIGRYQGLVSIDM-GGEEEFLHLDYDKGSKLYVPVHQLHVISRYSGADPDTAPLHQLGSGQWDKAKRKAAQQIRDTAAELLNLYARRALRQGFAFPLAPNDYEAFAESFGFDETPDQAAAITAVIADMTSGKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAMLAPTTLLAEQHYQTLADRFADWPVRIAEISRFKNKKEIDAAIEAINAGTIDIVIGTHKLLSPDVKFNRLGLVIIDEEHRFGVRQKEALKTLRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEDGVLREAILRELKRGGQVYFLHNEVETIENKRAKLEELVPEARVAVAHGQMHERELERVMRDFVAQRANILLCTTIIETGIDVPTANTILIHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDADGLTKQSQRRLEAIQQMEELGSGFYLAMHDLEIRGAGEVLGDKQSGEISEIGFQLYTDMLNQAVKSLKAGATTEINLGTPALLPSDYCGDVQERLSLYKRLANCESGETIDNIQEELIDRFGKLPPQAQSLIETHRLRIAAVPLGIRKIDTGADAVTLQFVP
>BETA13_P637977338 YP_584103 Rmet_1955 transcription-repair coupling factor [Ralstonia metallidurans CH34]
GLTGSADALAVAAYARMVAVVCAHAVDAQRLAEEIPWFAPELRVRLLPDWETLPYDSFSPHQDLVSERLATLHDIDVMLVPASTALYRLAPPAFLAAYTFFFKQGAKLDEAALKAQFTLAGYEHVSAVMRPGEYSVRGGLIDLYPMGSALPYRIDLFGDEIETIRAFDPDSQRSLYPVKEVRLLPGREFPLDETPSAGIEYYLPLFFTLFDYLPEGTQVNLESL--LLNRVLMCADSAGRRETLLQLFAEIAVAPLQTGFALPSMAFVTEAELYAGVDAMVRDLAELKIGDPVVHSEHGIGRYQGLVTLDM-GGDEEFLHLDYDKGSKLYVPVHQLHVISRYSGADPETAPLHSLGTGQWDKAKRRAAQQIRDTAAELLNLYARRALREGFAFPLQPKDYEAFAESFGFEETPDQAAAIAAVIADMTSGKPMDRLVCGDVGFGKTEVALRAAFVAVLGGKQVAMLAPTTLLAEQHFQTLSDRFAEWPVRIVELSRFKTKKEIDAAIKQINEGTVDIVIGTHKLLSDEVKFQRLGLVIIDEEHRFGVRQKEALKTLRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEDGVIREAILRELKRGGQVYFLHNEVETIENKRAKLAELVPEARIAVAHGQMHERELERVMRDFVSRRDNILLCTTIIETGIDVPTANTILIHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDVEGLTRQAQRRLEAIQQMEELGSGFYLAMHDLEIRGAGEVLGDKQSGEIHEIGFQLYTDMLNAAVKSLKAGATTEINLGTPALLPNDYCADVHERLSIYKRLANCEAGERVDDIQEELIDRFGRLPSQAQALIETHRLRIAAAPLGVRKIDAGEATVSMQFVP
>BETA13_P637690749 YP_295574 Reut_A1360 Transcription-repair coupling factor [Ralstonia eutropha JMP134]
GLPGSADALAIAAYARMLAVVCANAVDAQRLADEIPWFAPETRVRLLPDWETLPYDSFSPHQDLVSERLATLHDIDVMLVPASTALYRLAPPSFLAAYTFFFKQGERLDEAALKAQFTLAGYEHVSAVMRPGEYSVRGGLIDLYPMGSALPYRIDLFGDEIETIRAFDPDTQRSLYPVKEVRLLPGREFPLDEAPSAGIEYYLPLFFTLFDFLPADTQVNLESL--LLDRVLMCADTAGRRETLLQLFAEIAVAPLHSGFMLPSFAFVTEAELYAGVDSMVRDLAELKIGDPVVHSDHGIGRYHGLVSLDM-GGDEEFLHLEYDKGSKLYVPVHQLHVISRYSGADPDTAPLHHLGSGQWDKAKRRAAQQIRDTAAELLNLYARRAAREGFAFPLSPKDYETFAESFGFEETPDQAAAIAAVIADMTSGKPMDRLVCGDVGFGKTEVALRAAFVAVLGGKQVAMLAPTTLLAEQHFQTLSDRFAEWPVRIVELSRFKTKKEIDAAVKQINEGTVDIVIGTHKLLSDEVKFQRLGLVIIDEEHRFGVRQKEALKTLRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEDGVIREAILRELKRGGQVYFLHNEVETIENKRAKLAELVPEARIAVAHGQMHERELERVMRDFVSRRDNILLCTTIIETGIDVPTANTILIHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVHDVDGLTKQAGRRLEAIQQMEELGSGFYLAMHDLEIRGAGEVLGDKQSGEIHEIGFQLYTDMLNAAVKALKAGATTEINLGTPALLPNDYCADVHERLSLYKRLANCETPERVDDIQEELIDRFGRMPDQAQALVETHRLRIAAAPLGVRKIDAGEASISVQFVP
>BETA13_P640447575 YP_725958 H16_A1455 Transcription-repair coupling factor [Ralstonia eutropha H16]
GLRGSADALAVAAYAHMLAVVCSHAVDAQRLAEEIPWFAPELRVRLLPDWETLPYDSFSPHQDLVSERLATLHDIDVMLVPATTALYRLAPPAFLAAYTFFFKQGERLDEAALKAQFTLAGYEHVSAVMRPGEYSVRGGLIDLYPMGSALPYRIDLFGDEIETIRAFDPDTQRSLYPVKEVRLLPGREFPLDEAPSAGIEYYLPLFFTVFDYLPADTQVNLEAL-----RVLMCADSAGRRETLLQLFAEIAVAPLQSGFALPQIAFVTEAELYGTVDSMVRDLAELKIGDPVVHSEHGIGRYQGLVTLDM-GGDEEFLHLDYDKGSKLYVPVHQLHVISRYSGADPDTAPLHHLGSGQWDKAKRKAAQQIRDTAAELLNLYARRAAREGFAFPLSPKDYETFAESFGFEETPDQAAAIAAVIADMTSGKPMDRLVCGDVGFGKTEVALRAAFVAVLGGKQVAMLAPTTLLAEQHFQTLSDRFAEWPVRIVELSRFKTKKEIDAAIRQINEGTVDIVIGTHKILSDQVRFERLGLVIIDEEHRFGVRQKEALKTLRAEVDVLTLTATPIPRTLGMALEGLRDFSVIATAPQKRLAIKTFVRREEDGVIREAILRELKRGGQVYFLHNEVETIENKRARLAELVPEARIAVAHGQMHERELERVMRDFVARRDNILLCTTIIETGIDVPTANTILIHRSDKFGLAQLHQLRGRVGRSHHQAYAYLLVHDVEGLTKQAQRRLEAIQQMEELGSGFYLAMHDLEIRGAGEVLGDKQSGEIHEIGFQLYTDMLNAAVKALKAGATTEINLGTPALLPNDYCADVHERLSLYKRLANCETAERVDDIQEELIDRFGRLPAQAQALVETHRLRIAAAPLGVRKIDAGEATISVQFVP
>BETA13_P637710343 YP_315414 Tbd_1656 transcription-repair coupling factor [Thiobacillus denitrificans ATCC 25259]
GLAGAADALYLAEAARPLVIVCASAWDANRLTEELRWFDPALRVCAFPDWETLPYDNFSPHPDLLSERLATLYQIDLAVVALSTALHRLAPPSFLAAHTFFLKQKDRLDEAAFRAQMTLGGYSNVNQVFAPGEFSVRGGLIDLFPMGSAVPYRIDLFDNEIETLRAFDVDTQRSIYPVNEVRLLPAREFPLDEAAPAGIEYYLPLFFTLFDYLPQPTRAKLRSFID-GFKTLIVAPSAGRRETLHEYLAELTHGPLAEGFVTHDLAVITETELYAIIDSLLRDLSELKPGDPVVHAQYGVGQYLGLATMDL-GGDTEFLQLEYAKGDKLYVPVANLHLISRYSGASEGEVPLHRLGTDQWEKARRRAMQAARDTAAELLNLYALRAAREGHAFSFSLHDYEAFAEGFGYEETPDQAAAIAAVMADMQSGKPMDRLVCGDVGFGKTEVALRAAFMAVMGGYQVAVLVPTTLLAEQHFNNFSDRFSQWPVKLAELSRFRTAKEQAAALEALKDGRIDIVIGTHRLIQKDVKFARLGLVILDEEHRFGVRQKEQLKALRAEVDVLTLTATPIPRTLAMSLEGIRDFSVIATAPQKRLAVKTFVRSFSGGLIREAVLRELKRGGQVYFLHNEVSTIQNMRERLEKLLPEARIRVGHGQMSERELEQVMRDFYQQRYDILLCTTIIETGIDIPTANTILINRADKFGLAQLHQLRGRVGRSHHQAFAYLLVEDRT-LTPQAKKRLEAIQLMEELGSGFHLARHDLEIRGAGEVLGEKQSGEILEVGFSLYNDMLAGAVASLKAGVVSEINLHLPALLPADYCPDVHERLVLYKRLASCQTPDDLTAMQEELVDRFGELPDTTRALLAVHRLRMATRAYGIARLDVSGEGMSVQFVP
>BETA13_P637938662 YP_545857 Mfla_1748 transcription-repair coupling factor [Methylobacillus flagellatus KT]
PLTPGTDSLALAQLA-PIVVVTSNAFDAQRLLEEIPWYAPQLRVHLLPDWETLPYDHFSPHPDLISERLATLYQIDIVLVPISTALLRLPPKAYLAAHTFILKKGQTLDIEALRNQCANAGYHHVSQVMGPGEFSVRGGLIDLFPMGSALPYRLDLFDDEIETIRTFDVDTQRSLYPVADIRLLPAKEFPLDEAASGGIEWYLPLFFTLLDYVPADALDYIRRFKG---RILIAAESLGRRETMAQLFHDLGISPLHGGFRVDDITVITEAELYANTEGMLKDLSELREHDPVVHEQHGVGRYRGLVNIDF-GGETEFLLLEYAGDDKLYVPVSQLFLISRYSGGPPESAPLHRLGSGHWEKAKKKALKQVRDTAAELLNLYAQRAARKGHAFKLGLHDYEAFAEGFPFEETADQLAAIEAVISDMQSGRPMDRLVCGDVGFGKTEVALRAAFVAVMGGRQVAVLVPTTLLAEQHFHNFSDRFADWPVKITEISRFRTAKEQAQALKGLEDGSIDIVIGTHRLIQKDVKFKNLGLVILDEEHRFGVRQKEQLKAMRAEVDVLTLTATPIPRTLSMAMEGLREFSVIATPPQKRLAIKTFATHYSEGIIREAAMREFKRGGQVYFLHNEVDTIFVMKEKLEKILPEARIGIAHGQLRERELEHVMRDFYQQRFNLLLCTTIIETGIDVPTANTIIMNRADMFGLAQLHQLRGRVGRSHHQAYAYLLTDPDRNITPQAQKRLDAIQLLEDLGAGFHLAMHDLEIRGAGELLGDSQSGEMQEIGFTLYSEMLSHAVKQLKAGVTTEINLHTPALLPNDYCPDVHERLVLYKRLANCSDDDALDAMQEELIDRFGLLPEQGEALMACHRLRIAAKALGINKIDASDSAIQLHFSP
>BETA13_P637810721 YP_411338 Nmul_A0639 transcription-repair coupling factor [Nitrosospira multiformis ATCC 25196]
HFDGSSDSLALAQLAEPVTIITASALAAQRLLEEIPFFAPELRTRLLPDWETLPYDTFSPHQDLVSERLATLYQLDILIVPVTTALYRMPPPEYLAAHTFFLARGETLDLNALRSQMTLAGYSHVTQVLSPGEYSVRGGLIDLFPMGSPLPYRIDLLDNEIETIRTFDVDTQRSVYPVTEIRLLPAREFPLDEESPAGIEYYLPLFFTLFDYLPQTALAEFESS--GGGRTLLLAESLGRRELIADHLKQLGVGPLHNGFIYPEIAFVTESELYARADAVLRDLSEIKAGDPVVHEQHGIGRYLGLVSMDL-GGETEFLSLEYASGDKLYVPVSQLHLIGRYSGASPESAPLHKLGSGQWDKAKRKAMQQVRDTAAELLNIYAQRAARVGHAFRLKEQDYEAFVEGFGFEETPDQATAIAAVIDDLTSARPMDRLICGDVGFGKTEVALRAAFVAVADGRQVAVLVPTTLLAEQHFQNFSDRFEEWPVKIAELSRFRSGKEQAQALAGLADGQIDIVIGTHKLIQKGVRFKNLGLVIIDEEHRFGVRHKEQLKSLRSEVDVLTLTATPIPRTLALSLEGLRDFSVIATAPQRRLAIKTFVNRFSEGIIREACLRELKRGGQIYFLHNEVSTIQTMHDKLARLLPEARIGIAHGQMRERELEHVMKDFYQQRFNLLLCTTIIETGIDVPTANTIIIHRADKFGLAQLHQLRGRVGRSHHQAYAYLLVPEEEALGTQARKRLEAVQSMEELGAGFYLAMHDLEIRGAGEVLGESQSGEMQEIGFTLYANMLEAAVRSLKEGVATEINLHVPALLPEDYCSDIHERLILYKRMANCTSDEQLDEMQIELTDRFGLLPDPVKALLDCHRLRIAAAPLGIIRVEASSESIQVQFTP
>BETA13_P637426386 NP_840109 NE0008 mfd: transcription-repair coupling factor [Nitrosomonas europaea ATCC 19718]
GLEGSSDACALARLARLLAVITASALDAQRLLEEIPFFAPDLRVSLLPDWETLPYDIFSPHQDLISERLATFYQIDVLIIPVTTALYRMPPREFLAAHSFFVNQGSTLDLQSFRSQMSLAGYSHVSQVLSPGEYSIRGGLIDLFPMGSPLPYRIDLFDDEIESIRTFDVDTQRSIYPVKEIRLLPAREFPLDDNIPAGIEYYLPLFFTLFDYLAQHSTEQLTAFTQKGGRVLLLAESMGRRELMAEYLRELSVASLHSGFILAALALVTENELYATADSILRDLSEIKPGSPVVHEQHGIGRYLGLVNMNM-GDDSEFLALEYQGGDKLYVPVTQLHLISRYSGAAPEAAPLHKLGSGQWEKAKRKAMQQVRDTAAELLNLYAQRAARKGHIFRFNQHDYNAFADGFGFEETPDQATAINAVIQDMVSGKSMDRLICGDVGFGKTEVALRAAFVAVTDGKQVAVLVPTTLLAEQHYQNFSDRFDQWPVKIAELSRFRSAREQAEALQSLAQGTTDIIIGTHKLIQDKVKFKNLGLVIIDEEHRFGVRQKEQLKKLRAEVDVLTLTATPIPRTLAMSLEGLRDFSVIATAPQRRLAIRTFVHPYSEGIIREACLRELKRGGQIYFLYNEVSTIQNMYTRLTTLLPEARINIAHGQMRESELEHVMRDFYQQRFNLLLCTTIIETGIDIPTANTIIIHRADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPEKALTTQATRRLEAIQAMEELGSGFYLAMHDLEIRGAGAVLGDSQSGEMQEVGFSLYSSLLDAAIKSLKAGVSTEIRLHVPALLPESYCGDIHERLILYKRMAGCSDETELDEIHQELIDRFGLLPDPARALLDSHRLRIEARQLGITRIDAGPDNIQLQFVP
>BETA13_P638130378 YP_746382 Neut_0129 transcription-repair coupling factor [Nitrosomonas eutropha C71]
GFVGSSDACALAQLAQLLAVITANAQDARRLLEEIPFFAPDLRVSLLPDWETLPYDVFSPHHDLISERLATFHQIDVLIVPVTTALYRMPPREFLAAYSFFIKQKSTLDLQSFRSQMSLAGYSHVSQVISPGEYSIRGGLIDLFPMGSPLPYRIDLFDDEIESIRTFDADTQRSIYPVNEIRLLPAREFPLDDTIPAGIEYYLPLFFTLFDYLPQHSTEQLTTFISDGGRILLLAESLGRRELMAEYLRELGVAALHNGFILAALALITETELYATADSILRDLSEIKPGNPVVHEQHGIGRYLGLVSMDA-GNNDEFLALEYQGGDKLYVPVTQLHLISRYSGAAPEEAPLHKLGSGQWEKAKRKAMQQVRDTAAELLNLYAQRAARKGHTFRLNQHDYNVFADGFGFEETPDQAAAIHAVIQDMVSGKPMDRLICGDVGFGKTEVALRAAFIAIADGRQVAILVPTTLLAEQHYQSFSDRFDQWPVKIAELSRFRSTKEQSEALQSLAQGTTDIIIGTHKLIQDKVKFKNLGLVIIDEEHRFGVRQKEQLKKLRAEVDVLTLTATPIPRTLAMSLEGLRDFSVIATAPQRRLAIRTFVHPYTEGIIREACLRELKRGGQIYFLYNEVSTIQNMYTKLIKLLPEAKINIAHGQMRESELEHVMRDFYQQRFNMLLCTTIIETGIDVPTANTIIIHRADKFGLAQLHQLRGRVGRSHHQAYAYLLTPEKAALTIQAIRRLEAIQAMEELGSGFYLAMHDLEIRGAGAVLGDSQSGEMQEVGFSLYNSLLDAAIKSLKAGISTEVRLHVPALLPENYCNNIHERLVLYKRMAGCSDEAELDEIHQELIDRFGLLPDPARALLDSHRLRIEAKKMGITRIDASQDSIQLQFVT
>GAMMA2_P637785892 YP_391437 Tcr_1168 transcription-repair coupling factor [Thiomicrospira crunogena XCL-2]
NISESALALIEKAQN-LAVLLTENMAEANKYSELLRFFAP---ILSFPEWETLPYDQFSPHQDIISQRLKTLYQLGLLILPVSTLIQKVVPHQFIEKYTFLLQCGETVDIDAFTRQLESSGYQRVSQVMEHGEFAVRGSIIDLYPMGSRTPYRLDLFDDEIETIRSFDPETQRSVDSIEQIELLPAKEYDLTPETVDGLEYYLSLFHTFFDYLPSDCLAKLNAFLDHNGRILYCAESTGRRETLLTILSKIIVGPLEDSVYTDDFCILSESQIFGQFDNAISNLIELDLGQPIVHFDHGVGRFLGLETMTIQGEEHEFLMIQYAGDAKLYVPVTSLHLISRYTGASAETAPLHKLGSDKWDKAKRKAAEKVRDVAAELLDIYAQREARPGYAFQTDEEAYARFRAGFPFEETPDQEAAIEAVLSDMKSDKPMDRLICGDVGFGKTEVAMRAAFVAAYSGKQVAVLVPTTLLSQQHLENFKNRFADWPIRIEGLSRFQSAKETKQIVEAVKNNQVDIIIGTHKIIQNDMQFGNLGLIIIDEEHRFGVRQKEQLKKLRTEVDVMTMTATPIPRTLNMAMNDLRDLSIIATAPAKRLAVQTFVQDWNPDVVKEACLREIRRGGQIYLLFNNVDKIEQMAEEIQALLPEAKVETAHGQMHERELEQVMQNFYHRRFNILVCTTIIETGIDIPTANTILIHRADKFGLAQLHQLRGRVGRSHHKAYAYLFTAGKALMTKDAEKRLTAIAKHDTLGAGFMLASHDLEIRGAGELLGDGQSGQIHEIGFGLYSDLLDRAVRALKSGTGAEVELGMPALIPEDYLPDIHTRLVFYKRIASAEDNNALQELEVEMIDRFGLLPDQVKNLFETTRVKLVIDALNLKKVEASEAMIRIQFGS
>GAMMA2_P643417440 YP_002303387 CbuG_0860 transcription-repair coupling factor [Coxiella burnetii CbuG_Q212]
NLKGDSVSLAISTLAEPLLLITPDVHSANYLHRSLPFF-SA--ILHFPDWETLPYDYFSPHEDIISERLLTLYRLGIIISALPTLLQRLPPADHLEKNTFILSVDEKFSLQENRERLISAGYRSVQQVMEHGEYAQRGSIIDIYPMGSPLPYRIELFDDEVTSIRSFDPESQRSVEKIESVRLLPAREYPLTKEAAAGIEYYLPLFFTFFSYLPKNTTARLKNFTA-QGRVLFCAETDGRRETLLEFLKELTIAPLDKGVLLS-LAIISESQLFGEPNLLIRNLTELHIGDPVVHIQHGVGRYLGLQTIKT-SQEAEYLTLQYADNDKIYVPVSSLYLISRYAGADASHAPLQKLGSKQWEKIKEKTQKHIRDVAAELLDIYSRRQAATGFTFSIPEKGYSLFRQAFPFEETPDQSAAINDVIVDMSSKRSMDRLICGDVGFGKTEVAMQAAFIAVQNNKQVAVLVPTTLLAEQHFYNFQDRFADWPVRIAAISRLRTQKQRQQITQELAEGKIDIIIGTHKLLSKDIRFKDLGLLIVDEEHRFGVTQKERIKSLRAHVDILTLTATPIPRTLNMSLSGIRDLSLITTPPAKRLSVKTFVHDYSPVLIREAILRENLRGGQVYFLHNDVATLAATAEKLRTIIPEARLAIAHGQMRERDLERVMSDFYHQKYNLLVCTTIIESGIDIPTANTIIINRADRFGLAQLHQLRGRVGRSHHQAYAYLLIPDQEALTADAEKRLSAISQLDDLGVGFNLATHDLEIRGAGELLGVEQSGQIHDIGFSLYLELLEEAVSALKAGAASEIDLGITTLLPEDYVPDVNARLILYKRLANCKNKREIQALKEELIDRFGPLPPAAQHLLQSAELRLIANELGIQKINIGPKYGYFHFDK
>GAMMA2_P641330724 YP_001597022 COXBURSA331_A1299 transcription-repair coupling factor [Coxiella burnetii RSA 331]
NLKGDSVSLAISTLAEPLLLITPDVHSANYLHRSLPFFSP---ILHFPDWETLPYDYFSPHEDIISERLLTLYRLGIIISALPTLLQRLPPADHLEKNTFILSVGEKFSLQENRERLISAGYRSVQQVMEHGEYAQRGSIIDIYPMGSPLPYRIELFDDEVTSIRSFDPESQRSVEKIESVRLLPAREYPLTKEAAAGIEYYLPLFFTFFSYLPKNTTARLKNFIQ-GGRVLFCAETDGRRETLLEFLKELTIAPLDKGVLLPPLAIISESQLFGEPNLLIRNLTELHIGDPVVHIQHGVGRYLGLQTIKTD-QEAEYLTLQYADNDKIYVPVSSLYLISRYAGADASHAPLQKLGSKQWEKIKEKTQKHIRDVAAELLDIYSRRQAATGFTFSIPEKEYSLFRQAFPFEETPDQSAAINDVIVDMSSKRSMDRLICGDVGFGKTEVAMQAAFIAVQNNKQVAVLVPTTLLAEQHFYNFQDRFADWPVRIAAISRLRTQKQRQQITQELAEGKIDIIIGTHKLLSKDIRFKDLGLLIVDEEHRFGVTQKERIKSLRAHVDILTLTATPIPRTLNMSLSGIRDLSLITTPPAKRLSVKTFVHDYSPVLIREAILRENLRGGQVYFLHNDVATLAATAEKLRTIIPEARLAIAHGQMRERDLERVMSDFYHQKYNLLVCTTIIESGIDIPTANTIIINRADRFGLAQLHQLRGRVGRSHHQAYAYLLIPDQEALTADAEKRLSAISQLDDLGVGFNLATHDLEIRGAGELLGVEQSGQIHDIGFSLYLELLEEAVSALKAGAVSEIDLGITTLLPEDYVPDVNARLILYKRLANCKNKREIQALKEELIDRFGPLPPAAQHLLQSAELRLIANELGIQKINIGSKYGYFHFDK
>GAMMA2_P637582761 YP_126342 lpl0983 Transcription-repair coupling factor [Legionella pneumophila Lens]
QLYGSSLALALAEYCQIKLLITQDNLCASQLQDELQFFLNTQELLFFPDWETLPYDQFSPHQDIISERLYTLSRVGIIISSASTLMHRLSPPEFLNQYALMLKEGQKLDLNSFRNQLQQAGYHCVNKVLEHGEYALRGSIIDVYPMGSGLPFRIELFDDEIESLREFDPETQRTIEKINQIHLLPAREFPLNEQFPSGIEYYLPLFFTFFDYLPANAKCQLSEYCSPTRRYLIVVESAGRREVLLDLLKSITTGPLIYGCTDKQIVIIVESQLFGEPDLIIRDMAELRLGAPVVHLQFGVGRYQGLQYIDSNGTPSEFLVLAYAGDDKIYVPVTSLHMISRYTGVDSEHAPLHKLGSDQWQKEKKKAAEKIHDVAIELLDLYAKREAQPGHQYDFNQSEYIKFASGFPFTETPDQLQAIEQIIKDMQSPRPMDRLICGDVGFGKTEVAMRAAFVAVQNGKQVCILAPTTLLAGQHFESFRDRFAEFPVNIELLSRFRSNKESEAVLAALQSGKVDIVIGTHKLFQNNISFKNLGLLIIDEEHRFGVKQKEHIKSLRTHVDILSMTATPIPRTLNMAMAGIRDISLIATPPAKRLAIKTFWQEKNDLTIREAILREILRGGQVFYLHNNVQTIERVCQDLEALVPEAKIQSAHGQMRERQLERIMSDFYHHRFNVLVCTTIIETGIDIPTANTIIIDRADKFGLAQLHQLRGRVGRSHHQAYAYLLTPNEKLLTPDAVKRLEAIVSLEDLGAGFTLATHDLEIRGAGELLGEEQSGNMHAIGFNLFMEMLDRAVNDLKAGQGPEIDLRISAIIPEDYIGDIHNRLIMYKRIANAKTTQQLRELQIELIDRFGLLPQPVKHLFLITELKLKAEQLGIQKISASAQQGKLDFSE
>GAMMA2_P637579711 YP_123344 lpp1016 Transcription-repair coupling factor [Legionella pneumophila Paris]
QLYGSSLALALAEYCQIKLLITQDNLCASQLQDELQFFLNTQELLFFPDWETLPYDQFSPHQDIISERLYTLSRVGIIISSASTLMHRLSPPEFLNQYALMLKEGQKLDLNSFRNQLQQAGYHCVNKVLEHGEYALRGSIIDVYPMGSGLPFRIELFDDEIESLREFDPETQRTIEKINQIHLLPAREFPLNEQFPSGIEYYLPLFFTFFDYLPANAKRQLSEYCSPTRRYLIVVESAGRREVLLDLLKSITTGPLIYGCELTDIVIIVESQLFGEPDLIIRDMAELRLGAPVVHLQFGVGRYQGLQYIDSNGTPSEFLVLAYAGDDKIYVPVTSLHMISRYTGVDSEHAPLHKLGSDQWQKEKKKAAEKIHDVAIELLDLYAKREAQPGHQYDFNQSEYIKFASGFPFTETPDQLQAIEQIIRDMQSPRPMDRLICGDVGFGKTEVAMRAAFVAVQNGKQVCILAPTTLLAGQHFESFRDRFAEFPVNIELLSRFRSNKESEAVLAALQSGKVDIVIGTHKLFQNNISFKNLGLLIIDEEHRFGVKQKEHIKSLRTHVDILSMTATPIPRTLNMAMAGIRDISLIATPPAKRLAIKTFWQEKNDLTIREAILREILRGGQVFYLHNNVQTIERVCQDLEALVPEAKIQSAHGQMRERQLERIMSDFYHHRFNVLVCTTIIETGIDIPTANTIIIDRADKFGLAQLHQLRGRVGRSHHQAYAYLLTPNEKLLTPDAVKRLEAIVSLEDLGAGFTLATHDLEIRGAGELLGEEQSGNMHAIGFNLFMEMLDRAVNDLKAGQGPEIDLRISAIIPEDYIGDIHNRLIMYKRIANAKTTQQLRELQIELIDRFGLLPQPVKHLFLITELKLKAAQLGIQKISASAQQGKLDFSE
>GAMMA2_P637171023 YP_114301 MCA1864 transcription-repair coupling factor [Methylococcus capsulatus Bath]
GLHGCSDSLAIASAIGLFVVVTADAQSALRIEQEVKTF-GGDALLPFPDWEILPYDVFSPLPEITSQRLRTFYELGLLITPVSTLMHRVAPRTHTLANTFSIRTGSAVNIDQTRQTLESVGYQCVSQVYQHGEFAIRGSILDLYPMGSETPYRIELFDDEVETIRTFDPESQRSIEKVEDIELFPAREFPFDEAAVGGIEYYIPLFVTLFDYLPGDATEPLQCFGE-AGKILLVAESAGHRETLAANLTKLMVAALDHGLVIS-LAIVTEAQLSGDFGQFLRSLEELEIGAPVVHREHGVGRYLGLQRIDT-GVESEFLTIRYANDDKLYVPVSALGMVSRYAGADPEHAPLHRLGSEQWAKARRKALEQVRDVAAELLDIHARRAAASGRSFATLTEEYLSFAAQFPFEETPDQETAIQDVIRDLAAPRPMDRVVCGDVGFGKTEVAMRAAFIAAQNGRQVAVLVPTTLLAQQHYKNFCDRFADWPMRIDVLSRFVSKKDQAQTIADIGDGKVDIVIGTHRLLQKDIRFKDLGLVIIDEEHRFGVAHKEHFKKLRSEVDFLALTATPIPRTLDMALSGLREISVIATPPPHRHVIRTFVTEWDDTLVQEAITREIKRGGQVYFVHNKIETQPRLAERLEKLVPGIRTRIAHGQMPERELENIMLDFYHQRFNVLLCTTIVESGIDVPSANTILIDRADTFGLAQLHQLRGRVGRSHHRAYAYLLVPPKKAMTADAVKRLEAIEAAGELGAGFLLSSQDLEIRGAGELLGEEQSGQIQEIGFTLYTELLEKAVNALKSGAGTEVDLQCAALIPEEYLPDVHTRLVLYKRIANARSDDELRELQIEMIDRFGLLPEATKQLFAVSALKNEAAKLGIAKIEAGATGGRLIFEA
>GAMMA2_P637833029 YP_433896 HCH_02683 transcription-repair coupling factor [Hahella chejuensis KCTC 2396]
QAVGQSDAYILAQALKLLVVITPDMPSADQLESAVKFFLKNEPILTLPDWETLPYDTFSPHQDIISQRIQTLHNLGLLIVPLSTIMVRLAPKEFVQRSTLILRKGQPLRIDSYRSELEQAGYRCVDTVYEHGEFAVRGSILDIFPMGSKAPFRIDLFDEEVETLRQFDPETQRSASQVDEISLLPAHEFPLNEAATPGLEYYLTLFFSLLDYVARDACQAIDCAQQTGYKIILCAESAGRQQALMDTFKEITVAELAKGFADNEILVVAEADLYEGPENIIQNLTELKLNAPVVHIDHGIGRYKGLQSLEVDGQKQEFLVLEYANEAKLYVPVSSLHLISRYAGLDDKLAPINKLGTDRWSAAKRQAAEKIKDSAAELLEIYAKRELHTGYACPPPDEHYRAFSAAFPFEETPDQATAINAVLQDMMKPRPMDRLVCGDVGFGKTEVAMRAAFLAAHAGRQVAILTPTTLLAQQHFQSFQDRFADTAINIELISRFRSAGDIEKVKDKLSDGKVDILVGTHKLLQKDIQFKNLGLLIIDEEHRFGVQQKEKVKSLRANIDILTLTATPIPRTLNLSFQGVRDLSIIATPPEKRLSVKTFVQEHNNSIIKEAVLREILRGGQVFFLHNEVNTINKAASELQEMVPDARVAVAHGQMRERELERVMSDFYHKRFNVLMCTTIIETGIDIPSANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPPRNLTEDAKKRLDAISSAQDLGAGFTLATHDLEIRGAGELLGEEQSGHIQNIGFTLYLQLLDAAVKAMREGQGCEVNLRLPALIPDDYLPDVHNRLILYKRIASAKDEDALQSMQIEMIDRFGLLPDATKNLFRQAHLKLTADRLGMARIDIGAKGGVIEFNA
>GAMMA2_P637042472 NP_297338 XF0045 transcription-repair coupling factor [Xylella fastidiosa 9a5c]
RAPVSPTALAIACAAEPLLLVTHDNHSAHQVEVDLQTLLPELPVIGFPDWETLPYDQFSPDPNIVSQRLATLHRLGIVVVPVQTLMQQLAPLSYIVGGSFDFKVGQRLVLDAEKQRLERAGYRNVPQVMDPGDFTVRGGLLDVYPMGTDVPLRIELLDEEIDSIRTFDPESQRSLNQVDVVHMLPGREVPLDPAAPSGIEYYLPLFFTLFDYLSSDVLQALRAFLA-DYRVLIAATSPGRREVLLELLATITVAPLEDGFSLPPIAVLTERQLFPEPEAIIRDLGELSEGAPIVHEDHGVGRYRKLITMNVSGMPGEFVEIEYAKGDRLYVPVAQLHLISRYSGASPETAPLHSLGGEQWSKAKRKAAEKVRDVAAELLEIQARRQARAGLALRIDRTMYEPFAAGFPFEETPDQLAAIETTLRDLQSSQPMDRVVCGDVGFGKTEVAVRAAFAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPIRVEVLSRFKSTKEIKAELQKVSEGTMDVIVGTHRLLQPDVKFKDLGLVIVDEEQRFGVRQKEALKSLRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPLNRLAVQTFITPWDNALLHEAFQRELARGGQLYFLHNDVESIGRMQRDLAQLVPEARIGIAHGQMPERELERVMLDFQKQHFNVLLSTTIIESGIDIPNANTIIINRADRFGLAQLHQLRGRVGRSHHRAYAYLVVPDRRSMTADAEKRLEAIASMDELGAGFTLATHDLEIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIKQGRGTEVDLHIPTLIPEDYLPDVHTRLTFYKRISTARDSNALRELNVEMIDRFGVLPDAAKHLFAIAELKLQATALGISKLELGENGGRIMFGA
>GAMMA2_P641648126 YP_001774717 Xfasm12_0039 transcription-repair coupling factor [Xylella fastidiosa M12]
RAPVSPTALAIACAAEPLLLVTHDNHSAHQVEVDLQTLLPGLPVIGFPDWETLPYDQFSPDPNIVSQRLATLHRLGIVVVPVQTLMQQLAPLSYIVGGSFDFKVGQRLILDAEKQRLERAGYRNVPQVMDPGDFTVRGGLLDVYPMGTDVPLRIELLDEEIDSIRTFDPESQCSLNQVDVVHMLPGREVPLDPAAPSGIEYYLPLFFTLFDYLSADLLTFLADYAG---RVLIAATSPGRREVLLELLATITVAPLEDGFSLPPIAVLTERQLFPEPEAIIRDLGELSEGAPIVHEDHGVGRYRKLITMNVSGMPGEFVEIEYAKGDRLYVPVAQLHLISRYSGASPETAPLHSLGGEQWSKAKRKAAEKVRDVAAELLEIQARRQARAGLALRIDRTMYEPFAAGFPFEETPDQLAAIETTLRDLQSSQPMDRVVCGDVGFGKTEVAVRAAFAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPIRVEVLSRFKSTKEIKAELQKVSEGTMDVIVGTHRLLQPDVKFKDLGLVIVDEEQRFGVRQKEALKSLRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPLNRLAVQTFITPWDNALLHEAFQRELARGGQLYFLHNDVESIGRMQRDLAQLVPEARIGIAHGQMPERELERVMLDFQKQHFNVLLSTTIIESGIDIPNANTIIINRADRFGLAQLHQLRGRVGRSHHRAYAYLVVPDRRSMTADAEKRLEAIASMDELGAGFTLATHDLEIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIKQGRGAEVDLHIPTLIPEDYLPDVHTRLTLYKRISTARDSNALRELNVEMIDRFGVLPETAKHLFAIAELKLQATALGISKLELGENGGRIIFGA
>GAMMA2_P642692582 YP_001971280 Smlt1433 putative transcription-repair coupling factor [Stenotrophomonas maltophilia K279a]
RAPASSTALALAQAERPLLVIARDNHGANQLEADLQTLLALP-VVAFPDWETLPYDRFSPHPDIISQRLSALHRLGLVIVPVQTLLQQLAPRSYVIGGSFDLKVGQRLDLEAEKRRLESAGYRNVPQVMDPGDFAVRGGLLDVFPMGADEPLRVELLDEDIDSIRAFDPESQRSLDKVEAVHMLPGREVPMDEAAPAGVEYYLPLFFTLFDYLPDGSLDALKSFLG-HYRVLIAADSPGRREALLEVLQAIAVAPLEDGFALPRIAVLTERQLFPEPEAIIRDLGELTEGAPIVHEDHGVGRYRGLIAMDV-GMPGEFLEIEYAKGDRLYVPVAQLHLISRYSGASAETAPLHSLGGEQWSKAKRKAAEKVRDVAAELLEIQARRQARAGLALQVDRAMYEPFAAGFPFEETPDQLAAIDATLRDLASSQPMDRVVCGDVGFGKTEVAVRAAFAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPLKVEVLSRFKSTKEIKAELEKVAAGTIDVIVGTHRLLQPDVKFKDLGMVIVDEEQRFGVRQKEALKALRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPPNRLAVQTFITQWDNALLREAFQRELARGGQLYFLHNDVESIGRMQRELSELVPEARIGIAHGQMPERELEKVMLDFQKQRFNVLLSTTIIESGIDIPNANTIIINRADRFGLAQLHQLRGRVGRSHHRAYAYLITPDRRAITPDAEKRLEAIASMDELGAGFTLATHDLEIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIKQGRGAEVELHVPALIPEDYLPDVHTRLTLYKRISSARDSDALRELQVEMIDRFGLLPDAAKHLFAIAELKLKANTLGIRKLDLGENGGRIVFES
>GAMMA2_P642730366 YP_002027589 Smal_1201 transcription-repair coupling factor [Stenotrophomonas maltophilia R551-3]
RAPASPTALALAQAARPLLVIARDNHGANQLEADLQTLLPALPVVAFPDWETLPYDRFSPHPDIISQRLSALHRLGLVIVPVQTLLQQLAPRSYVIGGSFDLKVGQRLDLEAEKRRLESAGYRNVPQVMDPGDFAVRGGLLDVYPMGAEEPLRVELLDEDIDSIRAFDPESQRSLDKVEAVHMLPGREVPMDEAAPAGVEYYLPLFFTLFDYLPEGSLDALKSFLGYPGRVLIAADSPGRREALLEVLQAIAVAPLEDGFALDDIAVLTERQLFPEPEAIIRDLGELTEGAPIVHEDHGVGRYRGLIAMDV-GMPGEFLEIEYAKGDRLYVPVAQLHLISRYSGASAETAPLHSLGGEQWSKAKRKAAEKVRDVAAELLEIQARRQARAGLALQVDRAMYEPFAAGFPFEETPDQLAAIDATLRDLSSSQPMDRVVCGDVGFGKTEVAVRAAFAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPMKVEVLSRFKSTKEIKAELEKVAAGTIDVIVGTHRLLQPDVKFKDLGMVIVDEEQRFGVRQKEALKALRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPPNRLAVQTFITQWDNALLREAFQRELARGGQLYFLHNDVESIGRMQRELSELVPEARIGIAHGQMPERELEKVMLDFQKQRFNVLLSTTIIESGIDIPNANTIIINRADRFGLAQLHQLRGRVGRSHHRAYAYLVAPDRRSITPDAEKRLEAIASMDELGAGFTLATHDLEIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIKQGRGAEVELHVPALIPEDYLPDVHTRLTLYKRISSARDSDALRELQVEMIDRFGLLPDAAKHLFAIAELKLKANTLGIRKLDLGESGGRIVFES
>GAMMA2_P637656907 YP_242504 XC_1416 transcription-repair coupling factor [Xanthomonas campestris pv. campestris 8004]
RAPSSPTALAIARAAEPVLVIARDNQSAHQIEADLHALLALP-VVPFPDWETLPYDQFSPHPEIISQRLAALHRLGVVIVPVQTLLQQLAPLSYIVGGSFDLTVGQRLDLDAEKRRLESAGYRNVPQVMDPGDFAVRGGLLDVFPMGADTPLRIELLDEDIDSIRAFDPESQRSLDKVDAVKMLPGREVPMDDAAPSGVEYYLPMFFTLFDYLDTRVLQALASFLG-HYRVLVAADSAGRREALMEVLAAITVAPLEDGFALPQIAVLTERQLFPEPEAIIRDLGELSEGAPIVHEDHGVGRYRGLIVLDA-GMPGEFLEIEYAKGDRLYVPVAQLHLISRYSGASADTAPLHSLGGEQWTKAKRKAAEKVRDVAAELLEIQARRRARAGLALQVDRAMYEPFAAGFPFEETTDQLAAIDATLRDLGSSQPMDRVVCGDVGFGKTEVAVRAAFAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPMKVEVLSRFKSTKEIKAELEKVASGDIDVIIGTHRLLQPDVKFKDLGLVVVDEEQRFGVRQKEALKAMRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPPNRLAVQTFITAWDNTLLREAFQRELSRGGQLYFLHNDVESIVRMQRDLSELVPEARIGIAHGQMPERELERVMLDFQKQRFNVLLSTTIIESGIDIPNANTIIINRADRFGLAQLHQLRGRVGRSHHRAYAYLVVPDRRSMTSDAEKRLEAIASMDELGAGFTLATHDLEIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIRQGRGAEVELHVASLIPEDYLPDVHTRLTLYKRISSARDSDALRELQVEMIDRFGLLPDPVKHLFAIAELKLQANALGVRKLDLGENGGRLVFEA
>GAMMA2_P637274802 NP_638046 XCC2698 transcription-repair coupling factor [Xanthomonas campestris pv. campestris ATCC 33913]
RAPSSPTALAIARAAEPVLVIARDNQSAHQIEADLHALLALP-VVPFPDWETLPYDQFSPHPEIISQRLAALHRLGVVTVPVQTLLQQLAPLSYIVGGSFDLTVGQRLDLDAEKRCLESAGYRNVPQVMDPGDFAVRGGLLDVFPMGADTPLRIELLDEDIDSIRAFDPESQRSLDKVDAVKMLPGREVPMDDAAPSGVEYYLPMFFTLFDYLDTRVLQALASFLG-HYRVLVAADSAGRREALMEVLAAITVAPLEDGFALPQIAVLTERQLFPEPEAIIRDLGELSEGAPIVHEDHGVGRYRGLIVLDA-GMPGEFLEIEYAKGDRLYVPVAQLHLISRYSGASADTAPLHSLGGEQWTKAKRKAAEKVRDVAAELLEIQARRRARAGLALQVDRAMYEPFAAGFPFEETTDQLAAIDATLRDLGSSQPMDRVVCGDVGFGKTEVAVRAAFAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPMKVEVLSRFKSTKEIKAELEKVASGDIDVIIGTHRLLQPDVKFKDLGLVVVDEEQRFGVRQKEALKAMRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPPNRLAVQTFITAWDNTLLREAFQRELSRGGQLYFLHNDVESIVRMQRDLSELVPEARIGIAHGQMPERELERVMLDFQKQRFNVLLSTTIIESGIDIPNANTIIINRADRFGLAQLHQLRGRVGRSHHRAYAYLVVPDRRSMTSDAEKRLEAIASMDELGAGFTLATHDLEIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIRQGRGAEVELHVASLIPEDYLPDVHTRLTLYKRISSARDSDALRELQVEMIDRFGLLPDPVKHLFAIAELKLQANALGVRKLDLGENGGRLVFEA
>GAMMA2_P637296107 NP_643167 XAC2858 transcription-repair coupling factor [Xanthomonas axonopodis pv. citri 306]
RAPSSPTALAIARAAEPLLVIARDNQSAHQIEADLHALLALP-VVPFPDWETLPYDQFSPHPEIISQRLAALHRLGVVIVPVQTLLQQLAPLSYIVGGSFDLTVGQRLDLDAEKRRLESAGYRNVPQVMDPGDFAVRGGLLDVFPMGADTPLRVELLDEDIDSIRVFDPESQRSLDKVDAVKMLPGREVPMDDAAPSGIEYYLPMFFTLFDYLDKRVLQALASFLS-HYRVLVAADSAGRREALMEVLAAITVAPLEDGFALPQIALLTERQLFPEPEAIIRDLGELSEGAPIVHEDHGVGRYRGLIVLDA-GMPGEFLEIEYAKGDRLYVPVAQLHLISRYSGASAETAPLHSLGGEQWTKAKRKAAEKVRDVAAELLEIQARRRARAGLALQVDRAMYEPFAAGFPFEETGDQLAAIDATLRDLGSSQPMDRVVCGDVGFGKTEVAVRAAFAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPMKVEVLSRFKSTKEIKAELEKVASGDIDVIIGTHRLLQPDVKFKDLGLVVVDEEQRFGVRQKEALKAMRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPPNRLAVQTFITAWDNTLLREAFQRELSRGGQLYFLHNDVESIVRMQRDLSELVPEARIGIAHGQMPERELERVMLDFQKQRFNVLLSTTIIESGIDIPNANTIIINRADRFGLAQLHQLRGRVGRSHHRAYAYLVVPDRRSMTSDAEKRLEAIASMDELGAGFTLATHDLEIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIRQGRGADVELHVASLIPEDYLPDVHTRLTLYKRISSARDTDALRELQVEMIDRFGLLPDPVKHLFAIAELKLQANALGVRKLDLGENGGRLVFEV
>GAMMA2_P637631791 YP_200111 XOO1472 transcription-repair coupling factor [Xanthomonas oryzae pv. oryzae KACC10331]
RAPSSPTALAIARAAEPLLVIARDNQSAHQIEADLHALLALP-VVPFPDWETLPYDQFSPHPEIISQRLAALHRLGVVIVPVQTLLQQLAPLSYIVGGSFDLIVGQRLDLGAEKRRLESAGYRNVPQVMDPGDFAVRGGLLDVFPMGADTPLRVELLDEDIDSIRVFDPESQRSLDKVEAVKMLPGREVPMDDAAPSGIEYYLPMFFTLFDYLDKRVLQALASFLS-HYRVLVAADSAGRREALMEVLAAMTVAPLEDGFALPQIALLTERQLFPEPEAIIRDLGELSEGAPIVHEDHGVGRYRGLIVLDA-GMPGEFLEIEYAKGDRLYVPVAQLHLISRYSGASAETAPLHSLGGEQWTKAKRKAAEKVRDVAAELLEIQARRRARAGLALQVDRAMYEPFAAGFPFEETADQLAAIDATLRDLGSSQPMDRVVCGDVGFGKTEVAVRAAFAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPMKVEVLSRFKSTKEIKAELEKVASGDIDVIIGTHRLLQPDVKFKDLGLVVVDEEQRFGVRQKEALKAMRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPPNRLAVQTFITAWDNTLLREAFQRELSRGGQLYFLHNDVESIVRMQRDLSELVPEARIGIAHGQMPERELERVMLDFQKQRFNVLLSTTIIESGIDIPNANTIIINRADRFGLAQLHQLRGRVGRSHHRAYAYLVVPDRRAMTSDAEKRLEAIASMDELGAGFTLATHDLEIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIRQGRGADVELHVAALIPEDYLPDVHTRLTLYKRISSARDPEALRELQVEMIDRFGLLPDPVKHLFAIAALKLQANALGVRKLDLGENGGRLVFEA
>GAMMA2_P642638666 YP_001912543 PXO_04745 transcription-repair coupling factor [Xanthomonas oryzae pv. oryzae PXO99A]
RAPSSPTALAIARAAEPLLVIARDNQSAHQIEADLHALLALP-VVPFPDWETLPYDQFSPHPEIISQRLAALHRLGVVIVPVQTLLQQLAPLSYIVGGSFDLIVGQRLDLGAEKRRLESAGYRNVPQVMDPGDFAVRGGLLDVFPMGADTPLRVELLDEDIDSIRVFDPESQRSLDKVEAVKMLPGREVPMDDAAPSGIEYYLPMFFTLFDYLDKRVLQALASFLS-HYRVLVAADSAGRREALMEVLAAMTVAPLEDGFALPQIALLTERQLFPEPEAIIRDLGELSEGAPIVHEDHGVGRYRGLIVLDA-GMPGEFLEIEYAKGDRLYVPVAQLHLISRYSGASAETAPLHSLGGEQWTKAKRKAAEKVRDVAAELLEIQARRRARAGLALQVDRAMYEPFAAGFPFEETADQLAAIDATLRDLGSSQPMDRVVCGDVGFGKTEVAVRAAFAAASAGKQVAVLVPTTLLAEQHYRNFRDRFADYPMKVEVLSRFKSTKEIKAELEKVASGDIDVIIGTHRLLQPDVKFKDLGLVVVDEEQRFGVRQKEALKAMRANVHLLTLTATPIPRTLNMAMAGLRDLSIIATPPPNRLAVQTFITAWDNTLLREAFQRELSRGGQLYFLHNDVESIVRMQRDLSELVPEARIGIAHGQMPERELERVMLDFQKQRFNVLLSTTIIESGIDIPNANTIIINRADRFGLAQLHQLRGRVGRSHHRAYAYLVVPDRRAMTSDAEKRLEAIASMDELGAGFTLATHDLEIRGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIRQGRGADVELHVAALIPEDYLPDVHTRLTLYKRISSARDPEALRELQVEMIDRFGLLPDPVKHLFAIAALKLQANALGVRKLDLGENGGRLVFEA
>GAMMA2_P639797342 YP_943544 Ping_2204 fused transcription-repair coupling factor and superfamily II helicase [Psychromonas ingrahamii 37]
NLLGSSQALAISECAKPLILIVDDTPTALKLRQELEFF-ED--LITFPDWETLPYDNFSPHQDIISNRIETLYKLAILIVPISTLLLRIAPPSYLKQHTLIIKNKQKIELQALRADLQEAGYYAVEQVMEHGEFCARGSLLDIYPMGSDTPYRIDFFDDEVDSIRPFDSESQRSLKAISEIKLLPAHEFATDKDLPAGIEYYLPLFFSLFDYFPSNARQKLQHFTN-TGKVLFSVESAGRKESLLELLATITISQVENSFILT-FAFVTENELLGHADHIVRNLAEIKIDQPVVHIDYGVGKYLGLETIET-AHLTEFVKLEYLRGDKLYVPVSSLQLISRYSGHDVENAPINKLGTETWQKAKKQAAEKVRDVAAELLEVYAQRAAKVGHQYKLNKTHYALFSNDFPFEETHDQALTIKAVISDMCSSQPMDRLVCGDVGFGKTEVAMRAAFIATDNLRQVALLVPTTLLAQQHYENFKDRFADWPVRIEVLSRFKTAKQQKLILEEVNQGKIDILIGTHKLLSSNVQFADLGLLIIDEEHRFGVRQKEKIKALRAQIDILTLTATPIPRTLNMSMNGMRDLSIIATPPAKRLAVKTFVVQKKDQIISDAITREIMRGGQVYFLHNNVATIEKAAHDIQQLIPQAKVAVAHGQMNEHQLEKIMADFYHQRQNVLVCSTIIETGIDIPSANTIIINRADHLGLAQLHQLRGRVGRSHHQAYAYLLTPKPKLMTKDAQKRLQAIEALDTLGAGFTLATHDLEIRGAGELLGDEQSGQIASIGYNLYMEMLNQAIEALKNGSQAEVELRIPALIPTDYMPDVNQRLSLYKRIAGSKNKLALREIQVELIDRFGLLPASTKNLIQVATIKQQCTPLGIKRLEAHANGGNILFTE
>GAMMA2_P637284596 YP_268864 CPS_2139 transcription-repair coupling factor [Colwellia psychrerythraea 34H]
NLHGSSSSFALYQAAKPILLITSNTPQALKIEQELLSL-KSDSICLFPDWETLPYDNFSPHQDIISQRLATLYQLGIIIVPVTTLVQKLAPKQYIEANSLIIKQGDKRDLHQMRQALEASGYRNVDQVLEHGEFSARGAILDLFPMGSNKPFRLDFFDDEIDEIRLFDPESQRSKEKIDEINLLPAHEFPIDEALPPGIEYYLPLFFTLCDYLTDNTLELINQFKE-PNKVLFVAQSQGRRESVLELLERITVNSLTQGFAFQAIALVTEAELLGDADALFKNLAELTIGQPVVHIEHGIGRYLGLQTIEN-GIVTEFLVLSYANEAKLYVPVSSLHLIGRYSGADSDHAPLHKLGNDTWSKAKQKAAEKVRDVAAELLDIYAKRASNHGYSFKRDKQDYQAFSDSFGFEETFDQKQAINAVVSDMLSPKTMDRLVCGDVGFGKTEVAMRAAFVAVNDGKQVAILVPTTLLAQQHYENFRDRFANWPVVTEVLSRFKTPKEQKEVIARVESGQVDILIGTHKLLQNSIKYKDLGLLVVDEEHRFGVKQKEKIKQLRSNVDILTLTATPIPRTLNMAMGGMRDLSIIATPPAKRLAVKTFVREHDEALIREAVLRETSRGGQVYYLHNHVDTIDKTAADIQKLVPEARVVTAHGQMRERELERIMSDFYHQRFNVIVCTTIIETGIDVPSANTIIMDRADHLGLAQLHQLRGRVGRSHHQAYAYLLTPHEKRITKDAKKRLEAIASLEDLGAGFTLATHDLEIRGAGELLGEDQSGSMCQVGFSLYMEMLDQAVAALKEGTQTEIELRVPALLPDDYIFDVSLRLSLYKRIASCKNKNELDDIQVELIDRFGLLPQPSKNLVQIAKLRLKAQTIGISRIEASATGGSIEFSN
>GAMMA2_P637606058 YP_155907 IL1520 Transcription-repair coupling factor, superfamily II helicase [Idiomarina loihiensis L2TR]
ELHGSSPAMAIARLIDRVLIVTADANQAHRLEQEVKYFAGDD-ITLFPDWETLPYDSFSPHQDIISDRLSVLARLGALIVSINTLLHRIAPTSFVQGQALQIEKGQQLDSLKLRQQLENAGYRHVNQVMEHGEFSARGSILDLYPMGSQTPYRLDFFDDEVDTIRPFDPETQLSKDPIDGINLLPAHEFPLTKTLPGGIEYYLPLFFSLFDYLPEDTVTKLEQALTTGDKVLLSAESAGRREALREIVSKLIISPIINSFYLPDLWFITETELFGNADTLIRNLAELQAGQPVVHLDHGVGRYQGLTTLDA-GVTTEFVTIEYAGGAKLYVPVANLNVLSRYSGGEESHAPLNKLGNDSWDKAKKRAAEKVRDVAAELLDIYARREAKPGYAFNINEEDYQRFAAGFPFEETIDQQTAIDAVKQDMQQPRAMDRLVCGDVGFGKTEVAMRAAFIAVNEGKQVMVLVPTTLLAQQHYENFSDRFADQAIRVEVLSRFKTAKQSKGILEDLSNGKVDIVIGTHKLLQDNVKCHDLGLLIVDEEHRFGVRQKDTIKRLRADVDILTLTATPIPRTLNMAMNNIRDLSIIATPPAKRLAVKTFVREYDEPTVREAILREILRGGQVYFLHNNVDTIEKTAADIEALVPEARVVVAHGQMRERDLERIMSDFYHQRFNVLVCTTIIETGIDIPSANTIIMDRADHLGLAQMHQLRGRVGRSHHQAYAYLLTPHPKRMTKDAHKRLEAISQLEDLGAGFMLATHDLEIRGAGELLGDDQSGQIESIGFTLYMDMLEQAVKALKEGERAEIDLKLPALLPEAYIPDVNNRLSLYKRIANCETSKELDDLQVELIDRFGLLPDAAKNLIRQTQLRNNAEQLGIRKIDIGNQGGIIEFAD
>GAMMA2_P642755876 YP_002126727 MADE_02437 transcription-repair coupling factor [Alteromonas macleodii Deep ecotype, DSM 17117]
QLQGSSAALCISQALSPIVLITADTPSAMKLEKEIAFFLHNTPITLFPDWETLPYDSFSPHQDIVSQRLETLFRFGIFIVPVNTLMQRLAPTDYLAKYLLMLNKGDTLDRDQFRRNLEQAGYLHVSQVMSHSEFSVRGSIIDLFPMGSDQPFRIDLFDDEIDSIRYFDTETQRSGESVNKIRLLPAREFPTDKEMPSGVEYYLPLFFTLFDYLHPKSLKTVNHATDNGAKVLFCAETQGRREGLLSVLAKITVGMVDNSFRWGELLFITETELLGQESAIIRNLAELSIGQPVVHLDHGVGRYLGLQTLDA-GVTTEYLCIEYAKQSKLYVPVASLHLISRYTGGDADSAPVSALGSDAWTKAKQKAAEKVRDVAAELLDVYARRAAKPGFEYKINWDDYQAFADSFPFEETPDQAQAIAAVMHDMGSPSAMDRLVCGDVGFGKTEVAMRAAFLAANAGKQVAILVPTTLLAQQHYENFKDRFAAWPFEIEVMSRFVSGKAQKSVVERIGEGKVDIVVGTHKLLSSDIKYKDLGLVIIDEEHRFGVRQKEKLKSLRADVDILTLTATPIPRTLNMALSGMRDLSIIATAPARRLSIKTFVQQRNKAVIREAIMREILRGGQVYFLHNEVESIARTVEEIAEIVPEARIAMGHGQMRERELESVMSDFYHQRYNVLVCTTIIETGIDVPSANTIIMDRADHLGLAQLHQLRGRVGRSHHQAYAYLLTPHPKRMTKDAVKRLEAISQLEDLGAGFALATHDLEIRGAGELLGDDQSGQIASVGFSLYMDMLDKAVNALKDGGHTEVELRIPALLPEDYIADVNTRLSLYKRLASCATQDDIDEFQVECIDRFGLLPEPAKNLIEVAEIKLKAHDLGILKVDLSAQGGTIEFKE
>GAMMA2_P638054735 YP_661300 Patl_1725 transcription-repair coupling factor [Pseudoalteromonas atlantica T6c]
NLHGSSLAMSIANAAGPILLVTADTPSAMKLEKELSFF-QG-KVQLFPDWETLPYDNFSPHQDIISQRLETLYRLCVFIVPVNTLMLRMAPTDYLSKYLLFLKVNQTLDIDAFRLGLERAGYQHVNQVMGHSEFSIRGSIIDLFPMGSQQPFRIDLFDNDVDSIRYFDPDSQRSGDKIDEIKLLPAREFPTDQDMPGGIEYYLPLFFTLFDYLHPDTLATLKQRQR-GSKVLFSAESQGRRESLLDLLGKITIGLAEHSFVLFELAFITETELLGHENAVIRNLAELAIGQPVVHLDHGVGRYLGLQTLDA-GITTEYLTIEYAKEAKLYVPVSALHLISRYSGGDLEKAPLHNLGTETWSKAKQKAAERVRDVAAQLLDVYARRAAKPGYSYKIAWDEYQAFSDSFPFEETLDQQQAINAVIQDMGSSNAMDRLVCGDVGFGKTEVAMRAAFIAANQGKQVAILVPTTLLAQQHYENFKDRFADWPFKIEVMSRFGSAKDQKGVMAGLDDGKVDIVVGTHKLLQSDVKFDDLGLVIIDEEHRFGVRQKEKFKALRSDVDILTLTATPIPRTLNMALSGMRDLSIIATPPAKRLAIKTFVNQRSKELIREAIMREILRGGQVYFLHNEVDSIERTADEIAEMVPEARIAIGHGQMRERELEKVMGDFYHQRHNVLVCTTIIETGIDVPSANTIIMDRADHLGLAQLHQLRGRVGRSHHQAYAYLLTPHPKRMTKDAKKRLDAISSLEDLGAGFALATHDLEIRGAGELLGDDQTGQITTVGFTLYMEMLEQAVEALKEGNQTEIELRLPALFPEDYISDVNTRLSLYKKLASCKNERQINEVQIELIDRFGLLPDAAKNLVQISQMKLVAKKVGINKVEANNAGGAIEFSD
>GAMMA2_P639780680 YP_927207 Sama_1330 transcription-repair coupling factor [Shewanella amazonensis SB2B]
LPGGVARALTLAEMTCTTLIVTSDTPTALVLEAELGYLLI--DICLFPDRETLPYDSFSPHQDLISQRLETLSNLRLVIVPLTTLMVRLPPKAFLAANVLILKKGDRYQLQQMRQHLVDTGYHLVEQVYEHGEFAIRGSILDIFPSGASEPLRIELFDDEVESIRHFDPETQRSSGEVDSIRMLPAREFPTDSQMPAGIENYLPLFFTLFDYLPEELQESLANWAQGGQRIAFVAESEGRREALLELLGKLVVAPLAMGCQLSQLAVVCETELFGEQDVLIKNLAELKVGQPVVHLEHGVGLYQGLETLDT-GLVAEYLKLEYAGGDKLYVPVSALHLISRFAVGNDESAPLNRLGNESWSKAKRKAIEKIRDVAAELLDVYARREARPGDPCTLDEAEYAQFAQGFPFEETVDQETAIKAVIDDMCQPKAMDRLVCGDVGFGKTEVAMRAAFLAVSSGKQVVVLVPTTLLAQQHFENFKDRFADWPVRIEVMSRFRTAKEQQAVLSAMGEGKVDIVIGTHKLLNTELNFESLGLLIIDEEHRFGVRQKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVREYDKATVREAILREILRGGQVYYLHNQVETIEKAAQDIRELLPEARVVTAHGQMRERELERVMSDFYHQRFNVLVCTTIIETGIDVPSANTILIDRADHFGLAQLHQLRGRVGRSHHQAYAYLMTPHPKLMTVDARKRLEAIDALEDLGAGFMLATQDLEIRGAGELLGDEQSGHISKIGFSLYMEMLEGAVKALKQGAQCEIDLRIPALLPDDYVNDVNMRLSLYKRIAGCDTEKAVDEMKVELIDRFGLLPDATRNLLTMTVQKHRATRLGATKIEMHGRGGSIEFGE
>GAMMA2_P637344102 NP_717851 SO2255 transcription-repair coupling factor [Shewanella oneidensis MR-1]
CIAGVGQAVTLASLIRTTLIVTSDTPTALSLELELNYLLI--KVRLFPDRETLPYDSFSPHQDLISQRLETLSQISVVIVPVTTLMMRLPPKSYLSSNVFVLKKGDKYQLHDVRQQLTDTGYHLVEQVYEHGEFAIRGSILDIFPTGVNMPLRIELFDDEVETIRHFDPETQRSSTPVNAVRLLPAKEFPTDSSMPAGIENYLPLFFTLFDYLPKNTQIALQDYAEQAPRMLFSAESEGRREALLELLGKLIVSPLSRGCLLGLVSIICETELFGQNDTLIKNLAELKVGQPIVHLEHGVALYQGLVTLDT-GIVAEYLQLEYSGGDKLYVPVSNLHLISRYSVGADGETHLNKLGNDTWAKAKNKAIEKIRDVAAELLDVYARRQARPGESCEINDEEYAQFAQGFPFEETVDQESAIHAVLADMQSPTAMDRLVCGDVGFGKTEVAMRAAFVAVNDGKQVVVLVPTTLLAQQHYENFKDRFADWPVVIEVMSRFRTAKEQTQVLKQLEEGKVDIVIGTHKLLQSEAKFENLGLLIIDEEHRFGVRQKEKIKALRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVRESDPATVREAILREILRGGQVYYLHNNVETIEKCAQDISTLLPEARVVVAHGQMRERDLERVMSDFYHQRFNVLVCTTIIETGIDVPSANTIIIERADTFGLAQLHQLRGRVGRSHHQAYAYLMTPHPKRMTTDARKRLEAIDALEDLGAGFMLATQDLEIRGAGELLGDEQSGHISKIGFSLYMEMLESAVKALKQGQQCEMELRIPALLPEDYVGDVNIRLSLYKRIASCDSEEALDELKVELIDRFGLLPDATKNLMEMTLYKHQATRLGATKIEVHAKGGSIEFSQ
>GAMMA2_P639726884 YP_869924 Shewana3_2289 transcription-repair coupling factor [Shewanella sp. ANA-3]
CLAGVGQAVTLASLVRTTLIVTSDTPTALSIELELNYLLI--KVRLFPDRETLPYDSFSPHQDLISQRLETLSQISVVIVPVTTLMMRLPPKSYLSSNVFVLKKGDKYQLHDVRQQLTDTGYHLVEQVYEHGEFAIRGSILDIFPTGVNMPLRIELFDDEVETIRHFDPETQRSSTPVDAVRLLPAKEFPTDSSMPAGIENYLPLFFTLFDYLPKDTQIALQDYAERAPRMLFSAESEGRREALLELLSKLIVSPLSRGCLLGLVSIICETELFGHNDTLIKNLAELKVGQPIVHLEHGVALYQGLVTLDT-GLVAEYLQLEYSGGDKLYVPVSNLHMISRYSVGADGEAHLNKLGNDTWAKAKNKAIEKIRDVAAELLDVYARRQARPGESCDINDEEYAQFAQGFPFEETVDQESAIHAVLADMQSPVAMDRLVCGDVGFGKTEVAMRAAFVAVNAGKQVVVLVPTTLLAQQHYENFKDRFADWPVVIEVMSRFRTAKEQTQVLKLLEEGKVDIVIGTHKLLQSEAKFENLGLLIIDEEHRFGVRQKEKIKALRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVRESDPATVREAILREILRGGQVYYLHNNVETIEKCAQDISTLLPEARVVVAHGQMRERDLERVMSDFYHQRFNVLVCTTIIETGIDVPSANTIIIERADTFGLAQLHQLRGRVGRSHHQAYAYLMTPHPKRMTSDARKRLEAIDALEDLGAGFMLATQDLEIRGAGELLGDEQSGHISKIGFSLYMEMLESAVKALKQGQQCEMELRIPALLPEDYVGDVNIRLSLYKRIASCDSEETLDELKVELIDRFGLLPEATKNLMEMTLYKHQATRLGATKIEVHAKGGSIEFSD
>GAMMA2_P638122468 YP_737859 Shewmr7_1810 transcription-repair coupling factor [Shewanella sp. MR-7]
CLAGVGQAVTLASLVRTTLIVTSDTPTALSIELELNYLLI--KVRLFPDRETLPYDSFSPHQDLISQRLETLSQISVVIVPVTTLMMRLPPKSYLSSNVFVLKKGDKYQLHDVRQQLTDTGYHLVEQVYEHGEFAIRGSILDIFPTGVNMPLRIELFDDEVETIRHFDPETQRSSTPVDAVRLLPAKEFPTDSSMPAGIENYLPLFFTLFDYLPKDTQIALQDYAEHAPRMLFSAESEGRREALLELLSKLIVSPLSRGCLLGLVSIICETELFGHNDTLIKNLAELKVGQPIVHLEHGVALYQGLVTLDT-GIVAEYLQLEYSGGDKLYVPVSNLHMISRYSVGADGDAHLNKLGNDTWAKAKNKAIEKIRDVAAELLDVYARRQARPGESCDINDEEYAQFAQGFPFEETVDQESAIHAVLADMQSPVAMDRLVCGDVGFGKTEVAMRAAFVAVNAGKQVVVLVPTTLLAQQHYENFKDRFADWPVVIEVMSRFRTAKEQTQVLKQLEEGKVDIVIGTHKLLQSEAKFENLGLLIIDEEHRFGVRQKEKIKALRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVRESDPATVREAILREILRGGQVYYLHNNVETIEKCAQDISTLLPEARVVVAHGQMRERDLERVMSDFYHQRFNVLVCTTIIETGIDVPSANTIIIERADTFGLAQLHQLRGRVGRSHHQAYAYLMTPHPKRMTSDARKRLEAIDALEDLGAGFMLATQDLEIRGAGELLGDEQSGHISKIGFSLYMEMLESAVKALKQGQQCEMELRIPALLPEDYVSDVNIRLSLYKRIASCDSEEALDELKVELIDRFGLLPEATKNLMEMTLYKHQATRLGATKIEVHAKGGSIEFSD
>GAMMA2_P640499320 YP_001183678 Sputcn32_2158 transcription-repair coupling factor [Shewanella putrefaciens CN-32]
ALGGVCQAVTLASLVRTTLLVTSDTPSALSLELELTYLLI--KVRLFPDRETLPYDSFSPHQDLISQRLETLSQISVVIVPVTTLMMRLPPKAYLSANVFVLKKGDRYQLHNVRQHLTDTGYHLVEQVYEHGEFAIRGSILDIFPTGVNMPLRIELFDDEVETIRHFDPETQRSLHPVESIRLLPAKEFPTDSAMPAGIENYLPLFFTLFDYLPKETQLALQDYAQNAPRMLFSAESEGRREALLELLSKLIVSPLSRGCLLKLVSIICETELFGHNDALIKNLAELKVGQPIVHLEHGVALYQGLVTLDT-GLVAEYLQLEYAGGDKLYVPVSNLHLISRYSVGADEDAHLNKLGNETWAKAKNKAIEKIRDVAAELLDVYARRQARPGESCEIDEEEYAQFAQGFPFEETVDQESAIHAVLADMRSPIAMDRLVCGDVGFGKTEVAMRAAFVAVNAGKQVVVLVPTTLLAQQHYENFKDRFADWPVVTEVMSRFRTAKEQTQVLKQLEEGKVDIVIGTHKLLQSEAKFENLGLLIIDEEHRFGVRQKEKIKALRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVRESDPATVREAILREILRGGQVYYLHNNVESIEKCAQGIIDLVPEARVVVAHGQMRERDLERVMSDFYHQRFNVLVCTTIIETGIDVPSANTIIIERADTFGLAQLHQLRGRVGRSHHQAYAYLMTPHPKRMTSDARKRLEAIDALEDLGAGFMLATQDLEIRGAGELLGDEQSGHISKIGFSLYMEMLEAAVKALKQGQQCEIELRIPALLPEAYVSDVNIRLSLYKRIAGCETQEALDELKVELIDRFGLLPEATKNLMEMTLYKHQATRLGATKIEVHAKGGSIEFSH
>GAMMA2_P640119629 YP_001050768 Sbal_2406 transcription-repair coupling factor [Shewanella baltica OS155]
TVGGVCQAVTLASLARTTLVVTSDTPSALSLELELSYLL---SVRLFPDRETLPYDSFSPHQDLISQRLETLSQLSIVIVPVTTLMMRLPPKAYLSANVFMLKKGDSYKLHDVRQHLTDTGYHSVEQVYEHGEFAIRGSILDIFPTGMNMPLRIELFDEEVETIRHFDPETQRSLQPVDSIRLLPAKEFPTDSSMPAGIENYLPLFFTLFDYLPKDTQLALQDYASSAKRMLFSAESEGRREALLELLAKLIVSPLSRGCLLKDISIICETELFGHNDALIKNLAELKVGQPIVHLEHGVALYKGLVTLDT-GLVAEYLQLEYAGGDKLYVPVSSLHLISRYSVGADEDAHLNKLGNETWAKAKKKAIEKIRDVAAELLDVYARRQSRPGESCEIDEEEYAQFARGFPFEETVDQESAIIAVLADMQSPTAMDRLVCGDVGFGKTEVAMRAAFVAVNAGKQVVVLVPTTLLAQQHYENFKDRFADWPVVTEVMSRFRTAKEQTQVLQQLEEGKVDIVIGTHKLLQSEAKFENLGLLIIDEEHRFGVRQKEKIKALRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVRESDPATVREAILREILRGGQVYYLHNNVESIEKCAQGIIDLLPEARVVVAHGQMRERDLERVMSDFYHQRFNVLVCTTIIETGIDVPSANTIIIERADTFGLAQLHQLRGRVGRSHHQAYAYLMTPHPKRMTPDARKRLEAIDALEDLGAGFMLATQDLEIRGAGELLGDEQSGHISKIGFSLYMEMLEAAVKALKQGQQCEIELRIPALLPEAYVSDVNIRLSLYKRIAGCETEAALDELKVELIDRFGLLPEPTRNLMEMTLYKHEATRLGATKIEVHSKGGSIEFSH
>GAMMA2_P641288805 YP_001554939 Sbal195_2511 transcription-repair coupling factor [Shewanella baltica OS195]
TVGGVCQAVTLASLARTTLVVTSDTPSALSLELELSYLLI--KVRLFPDRETLPYDSFSPHQDLISQRLETLSQLNIVIVPVTTLMMRLPPKAYLSANVFVLKKGDSYKLHDVRQHLTDTGYHSVEQVYEHGEFAIRGSILDIFPTGMNMPLRIELFDEEVETIRHFDPETQRSLQPVDSIRLLPAKEFPTDSSMPAGIENYLPLFFTLFDYLPKDTQLALQDYASSAKRMLFSAESEGRREALLELLAKLIVSPLSRGCLLKDISIICETELFGHNDALIKNLAELKVGQPIVHLEHGVALYKGLVTLDT-GLVAEYLQLEYAGGDKLYVPVSSLHLISRYSVGADEDAHLNKLGNETWAKAKKKAIEKIRDVAAELLDVYARRQSRPGESCEIDEEEYAQFARGFPFEETVDQESAIIAVLADMQSPTAMDRLVCGDVGFGKTEVAMRAAFVAVNAGKQVVVLVPTTLLAQQHYENFKDRFADWPVVTEVMSRFRTAKEQTQVLQQLEEGKVDIVIGTHKLLQSEAKFENLGLLIIDEEHRFGVRQKEKIKALRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVRESDPATVREAILREILRGGQVYYLHNNVESIEKCAQGIIDLLPEARVVVAHGQMRERDLERVMSDFYHQRFNVLVCTTIIETGIDVPSANTIIIERADTFGLAQLHQLRGRVGRSHHQAYAYLMTPHPKRMTPDARKRLEAIDALEDLGAGFMLATQDLEIRGAGELLGDEQSGHISKIGFSLYMEMLEAAVKALKQGQQCEIELRIPALLPEAYVSDVNIRLSLYKRIAGCETEAALDELKVELIDRFGLLPEPTRNLMEMTLYKHEATRLGATKIEVHSKGGSIEFSH
>GAMMA2_P640163192 YP_001093756 Shew_1630 transcription-repair coupling factor [Shewanella loihica PV-4]
QLTGAARAISLAKLCEMTLVVTPDTPSALRLEAELGYLLI--PVMLFPDRETLPYDSFSPHQDLVSQRLETLSRISLVIVPMSTLMVKLPPQSFLTGNVLLLSKGDNYPLEAVRSQLVNTGYHHVEQVYEHGEFAVRGSIIDLFPMGAQSPYRIELFDDEVESIREFDPETQRSSGEIESIRLLPAKEFPTNDAMPAGIESYLPLFFSLFDYLPGECQISLKEFANGGTPILFCVESEGRREALLELLAKLIVAPLSQGAIYHPWALVCETELFGQQDALIKDLAELKVGQPIVHLDHGVALYQGLETLDT-GLVAEYLKLEYAGGDKLYVPVASLNLISQYSVGADDAPQLNKLGNESWTKAKRKAIEKIRDVAAELLDVYARRQARPGEACRLDREEYAQFAGSFPFEETVDQETAIDAVLTDMCSPISMDRLVCGDVGFGKTEVAMRAAFVAVNDGKQVAILVPTTLLAQQHYENFKDRFADWPIKIEVMSRFKTAKEQQAVLKQLELGQVDIVIGTHKLLQSEAKFENLGLLIIDEEHRFGVRQKEKIKALRANIDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVREYDDATVREALLREILRGGQVYFLHNSVETIEKRAREIEALLPEARVVTAHGQMRERDLEKVMSDFYHQKYNVLVCTTIIETGIDVPSANTIIIERADNFGLAQLHQLRGRVGRSHHQAYAYLMMPHPKRMTKDAIKRLEAIGALEDLGAGFMLATQDLEIRGAGELLGDEQSGHISKIGFTLYMEMLEDAVKSLKEGGQCEIDLRIPALLPEDYVGDVNIRLSLYKRIANCATAQALDELKVELIDRFGLLPQATKNLMEVSLFKHQATALGIAKIEMHAKGGSLEFNN
>GAMMA2_P643425136 YP_002311110 swp_1755 Transcription-repair coupling factor [Shewanella piezotolerans WP3]
TIGGAAQALTIANIAKVTLVVTADTPSAIALETELSYLLM--SIWLFPDRETLPYDSFSPHQDLVSQRLEALSRISVVIVPISTLMVKLPPQSFLSGNVLILEKGDNYQLHDVREQLINTGYHSVEQVYEHGEFAVRGSIIDIFPMGSNQPFRIELFDDEVESIRHFDPETQRSSQEIASIRLLPAKEFPTDDSMPAGIENYLPLFFSLFDYLPSKTQSLLEEYATLGDRLLFSAESEGRREALVELLSKLIVSPLSQGCIIEKFSLICETELFGQSDALVKNLAELKVGQPIVHLEHGVARYQGLETLDT-GLVAEYLVLEYSGGDKLYVPVSSLHLISRYSVGPDEEANLNKLGNETWSKAKRKAIEKIRDVAAELLDVYARRQARPGDACKIDQEEYAQFASSFPFEETVDQETAITAVLDDMRTPMAMDRLVCGDVGFGKTEVAMRAAFVAVNDGKQVAILVPTTLLAQQHFENFQDRFADWPFKIEVMSRFKTAKEQNQVMKELTDGKVDIVIGTHKLLQSEAKFENLGLLVIDEEHRFGVRQKEKIKALRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVREYDDATIREALLREILRGGQVYFLHNSVETIEKRAAEISELLPEARVVTAHGQMRERELERVMSDFYHQRFNVLVCTTIIETGIDVPSANTIVIERADKFGLAQLHQLRGRVGRSHHQAYAYLMTPHPKRMTKDARKRLEAIGALEDLGAGFMLATQDLEIRGAGELLGDEQSGHISKIGFTLYMEMLEDAVKLLKEGQQSEIDLRIPALLPDDYVSDVNMRLSLYKRIANCKTEKAVDELKVELIDRFGMLPEPTKNLMELTLYKHLATQLGLRKIEMHAKGGSIEFGD
>GAMMA2_P641552406 YP_001673838 Shal_1613 transcription-repair coupling factor [Shewanella halifaxensis HAW-EB4]
TLSGAAQALTIANIAKVTLVVTADTPNAIGLEAELSYLLI--PIWLFPDRETLPYDSFSPHQDLVSQRLEALSRISVVIVPVTTLMVRLPPQSFLTGNVLMLEKGDKYRLLDVREQLINTGYHVVEQVYEHGEFAVRGSIIDIFPMGSSQPFRIELFDDEVETIRNFDPETQRSSKEINAIRLLPAKEFPTDDAMPAGIENYLPLFFTLFDYLPDSTQTELDKYAALGDRLLFSAESEGRREALLELLAKLIVSPLAQGCIVEKFSLICETELFGHSDALVKNLAELKVGQPIVHLDHGVARYQGLETLDT-GLVAEYLVLEYSGGDKLYVPVSSLHLISRYSVGPDEEATLNKLGNETWAKAKKKAVEKIRDVAAELLDVYARRQARPGEACHIDQEEYAQFANSFPYEETVDQETSINAVLEDMRSPTAMDRLVCGDVGFGKTEVAMRAAFVAVNDGKQVAILVPTTLLAQQHYENFKDRFADWPFKIEVMSRFKTAKEQTQVMKDLLNGKVDIVIGTHKLLQSEAKFENLGLLVIDEEHRFGVRQKEKIKALRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVREYDEATIREALLREILRGGQVYFLHNSVETIEKRAAEISELLPEARVVTAHGQMRERELERVMSDFYHQRFNVLVCTTIIETGIDVPSANTIVIERADNFGLAQLHQLRGRVGRSHHQAYAYLMTPHPKRMTKDARKRLEAIGALEDLGAGFMLATQDLEIRGAGELLGDEQSGHISKIGFTLYMEMLEDAVKSLKQGHQCEVELRIPALLPEDYVADVNMRLSLYKRIANCETAKALDELKVELIDRFGMLPEATKNLMEMTLYKHLATQLGLRKIEMHAKGGSIEFGE
>GAMMA2_P641236131 YP_001501403 Spea_1543 transcription-repair coupling factor [Shewanella pealeana ATCC 700345]
TLGGAAQALTIANIAKVTLVVTADTPNAISLETELSYLLI--PIWLFPDRETLPYDSFSPHQDLVSQRLEALSRIAVVIVPITTLMVRLPPQSFLTGNVLMLEKGDKYRLMDVREQLINTGYHVVEQVYEHGEFAVRGSIIDIFPMGSSQPFRIELFDDEVETIRHFDPETQRSSE-INAIRLLPAKEFPTDDAMPAGIENYLPLFFTLFDYLPSNTQAELEKYAALGDRMLFSAESEGRREALLELLSKLIVSPLAQGCIIEKFSLICETELFGQSDALVKNLAELKVGQPIVHLDHGVARYQGLETLDT-GLVAEYLVLEYSGGDKLYVPVAALNLISRYSVGPDEEATLNKLGNESWAKAKKKAVEKIRDVAAELLDVYARRQARPGEACRIDLEEYAQFANSFPYEETVDQETAIEAVLEDMRSPTAMDRLVCGDVGFGKTEVAMRAAFVAVNDGKQVAILVPTTLLAQQHYENFKDRFADWPFKIEVMSRFKTAKEQTQVMKELLDGKVDIVIGTHKLLQSEAKFENLGLLVIDEEHRFGVRQKEKIKALRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVREYDEATIREALLREILRGGQVYFLHNSVETIEKRAAEISELLPEARVVTAHGQMRERELERVMSDFYHQRFNVLVCTTIIETGIDVPSANTIVIERADNFGLAQLHQLRGRVGRSHHQAYAYLMTPHPKSMTKDARKRLEAIGALEDLGAGFMLATQDLEIRGAGELLGDEQSGHISKIGFTLYMEMLEDAVKSLKQGHQCEVELRIPALLPEDYVGDVNIRLSLYKRIANCETAKALDEMKVELIDRFGMLPDATKNLMEMTLYKHLATQLGLRKIEMHAKGGSIEFGE
>GAMMA2_P640933752 YP_001474568 Ssed_2833 transcription-repair coupling factor [Shewanella sediminis HAW-EB3]
TLGGASQAITLANIVQLTLAVTNDTPTALLLETELTYLLI--PVWIFPDRETLPYDNFSPHQDLVSQRLETLSRISLVIVPITTLMMRLPPKSFLAGNVLLLTKGDNYCLQDVKQQLVDTGYHMVEQVYEHGEFAVRGSIIDLFPMGSTQPYRIELFDDEVESIRYFDPETQRSSGTIDSVRLLPAKEFPTNDALPAGIENYLPLFFSLFDYLPDDAQSLLQEFSEGAGNILFSAESEGRREALFELLSKLIVSPLSKGCIVEKFSIICETELFGHSDALVKNLAELKVGQPIVHLDHGVARYMGLETLDT-GLIAEYLMLEYSGGDKLYVPVSSLHLISRYSVGPDEEANLNKLGNETWAKAKRKAVEKIRDVAAELLDVYARRQARPGDACKVIEEEYAQFANSFPFEETVDQETSINAVMTDMCSPIAMDRLVCGDVGFGKTEVAMRAAFVAVNDGKQVAILVPTTLLAQQHYENFKDRFADWPVKIEVMSRFKTAKEQKHVMEELANGKVDIVIGTHKLLQSDAKFENLGLLVIDEEHRFGVRQKEKIKALRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLSVKTFIREYDDTTVIEALQREILRGGQVYFLHNNVESIEKRASELSELLPEARVVTAHGQMRERELEKVMSDFYHQKFNVLVCTTIIETGIDVPSANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLMTPHPKRMTKDSVKRLEAIGALEDLGAGFLLATQDLEIRGAGELLGDEQSGHISKIGFTLYMEMLEDAVKSLKEGHQCEIELRIPALLPDDFVHDVNIRLSLYKRIANCETEQALDELRVELIDRFGLLPDATKNLMELTLYKHQATALGIKKLEMHAKGGSLEFND
>GAMMA2_P641633314 YP_001760190 Swoo_1811 transcription-repair coupling factor [Shewanella woodyi ATCC 51908]
TLGGASQAITLANLVKLTLAVTSDTPTALLLESELNYLLL--PVWLFPDRETLPYDSFSPHQDLVSQRLETLSQIGVVIVPISTLMVLLPPRSFLAGNVLMLAKGDNYCLQDVKQQLVDTGYHLVEQVYEHGEFAVRGSIIDLFPMGSTQPYRIELFDDEVESIRHFDPETQRSSSAIDSIRLLPAKEFPTDSALPAGIENYLPLFFSLFDYLPAQTQTLLQDYATQGGRILFSAESEGRREALLELFAKLIVSPLSKGAIIEKFSIICETELFGHSDALIKNLAELKVGQPIVHLDHGVAHYQGLETLDT-GLVAEYLKLEYAGGDKLYVPVSSLHLISRYSVGPDEEAQLNKLGNESWAKAKKKAIEKIRDVAVELLDVYARRQARPGDACHIDQEEYALFSNSFPFEETVDQETSINAVLTDMSSPIAMDRLVCGDVGFGKTEVAMRAAFVAVNDGKQVAILVPTTLLAQQHFENFKDRFADWPVKIEVMSRFKTAKEQKAVLEDLSNGKVDIVIGTHKLLQSEAKFENLGLLVIDEEHRFGVRQKEKIKALRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVREYDNAAIREALLREILRGGQVYFLHNTVETIEKRAAEISELLPEARVITAHGQMRERELEKVMSDFYHQRFNVLVCTTIIETGIDIPSANTIVIERADKFGLAQLHQLRGRVGRSHHQAYAYLMTPHPKSMTKDARKRLEAIGALEDLGAGFMLATQDLEIRGAGELLGDEQSGHISKIGFTLYMEMLEDAVKSLKEGRQCEIDLRIPALLPEDFVHDVNIRLSLYKRIANCETSQALDELKVELIDRFGLLPDSTKNLMELTLYKHQATALGIKKIEMHAKGGSLEFSD
>GAMMA2_P637955685 YP_562681 Sden_1674 transcription-repair coupling factor [Shewanella denitrificans OS217]
TLGGLSQSLSLAQLILTSLIVTHDTPTAMLLETELHYLLV--NLCLFPDRETLPYDSFSPHQDLISQRLETLAQLNAVIVPINTLMVRLPPQSYLSANVMVLKKGDTYALQTVRQHLVDTGYHLVEQVYEHGEFAIRGSILDIFPTGCQQPLRIELFDDEIESIRHFDVETQRSEA-VDAIRMLPAKEFATDSAMPAGIENYLPLFFSLFDYLPENTQESLQAFAQDGKPLLFSAESEGRREALLALLSKLIVSPLSRGCTLLDLSLICETELFGHSDALIKDLAELKVGQAIVHLEHGVALYQGLETLDT-GLVAEYLKLEYAGGDKLYVPVSSLHLISRYNANSEDNAQLNKLGNETWAKAKKKAIEKIRDVAAELLDVYARRQSRPGEALAIDADEYAQFAQGFPYEETVDQESAIIAVLNDMQAPTSMDRLVCGDVGFGKTEVAMRAAFVAVNAGKQVVVLVPTTLLAQQHYENFKDRFADWPVEIEVMSRFRSAKEQEQVLQSLSEGKVDIVIGTHKLLQSEAKFVDLGLLIIDEEHRFGVRQKEKIKALRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVREYHQATIREALLREILRGGQVYYLHNNVETIEKCAQDLRDLLPEARVVTGHGQMRERDLEKVMADFYHQRFNVLVCTTIIETGIDVPSANTIVIDRADKFGLAQLHQLRGRVGRSHHQAYAYMITPPIKLISTDARKRLEAIDALEELGAGFMLATQDLEIRGAGELLGDEQSGHISKIGFSLYMEMLESAVSALKEGAQCEVDLRIPALLPEDYVSDVNMRLSMYKRIANCKSEAMLDELRVEFIDRFGLLPEPTKNLLELSLYKHQATKLGATKIEMHAKGGSIEFGD
>GAMMA2_P638135195 YP_751082 Sfri_2399 transcription-repair coupling factor [Shewanella frigidimarina NCIMB 400]
TLGGVSQAITLANLINTSIIVTHDTPSALSLEVELSYLLV--NVCLFPDRETLPYDSFSPHQDLISQRLETLANINVVIVPVNTLMVRLPPKSFMTANVMVLNKGDTYSLQQARQHLTDTGYHIVDQVYEHGEFAIRGSIIDIFPTGSKQPLRIELFDDEVESIRFFDVDTQRS-GMARAIRMLPAKEFPTDNHMPAGIENYLPLFFTLFDYLPQNSQIALQEYCQQHPKLVFSAESEGRREALLDLFAKLIVSPLARGCVLTDVSIICETELFGQTDVLVKNLAELKVGQPIVHLEHGVALYQGLETLDT-GLVAEYLKLEYSGGDKLYVPVSSLHLISRYNASGDGNTHLNKLGNETWAKAKKKAIERIRDVAAELLDVYARRQARPGDAMSIDEEEYAQFSQGFPFEETVDQESAIHAVLEDMQAPRAMDRLVCGDVGFGKTEVAMRAAFVAVNAGKQVVVLVPTTLLAQQHYENFKDRFADWPIVIEVMSRFRTAKEQSSVVEQLSEGKVDIVIGTHKLLSSEANFDNLGLLVIDEEHRFGVRQKEKIKALRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVREYDKATAREAILREILRGGQVYYLHNNVETIEKTAQNIRDLLPEARVITAHGQMRERDLEKVMSDFYHQRFNVLVCTTIIETGIDVPSANTIIIDRADMFGLAQLHQLRGRVGRSHHQAYAYMMTPHPKRMTPDARKRLAAIEALEDLGAGFLLATQDLEIRGAGELLGDEQSGHISKIGFSLYMEMLESAVKALKEGAKAEIDLRIPALLPEDYVSDVNMRLSLYKRIANCETDTMLDELKVEFIDRFGMLPVPTRNLMAITLYKHQATALGIHKIEMHAKGGSVEFGQ
>GAMMA2_P637734747 YP_340351 PSHAa1836 transcription-repair ATP-dependent coupling factor [Pseudoalteromonas haloplanktis TAC125]
QLSGSGLSIAIAEGVKLVLIVTPDTPSALRLETELEYLLPDNPVMIFPDWETLPYDHFSPHQDIISARLATLNTLSVLIVPVSTLMLRTAPASFIYGSTINFKVGDKLDTHNFRNNLEQAGYLNVQQVMEHGEYAIRGSIVDLYPMGSPHPFRLDFFDDELDSIRLFDVETQRSDEKVDKIELLPAHEFPTNEAWPAGIEYYMPLFFTIFDYLPETTTGAFINYKKHKGRILLSVESDGRRESLLGVLKPLIVSPLEQSVVLPSLSIITEQELLGIQDALIRNLAELKEGQPIVHLDHGVGRYQGLQTIDAAGIITEFVTITYASEAKLYVPVSALHMLSRYSGGEEASAPLHKLGSDAWDKAKKRAAEKVRDVAAELLDIYAQRQAKPGNKFTLDAPAYRQFSDSFPFEETDDQRNAIEAVLGDMQSKQAMDRLVCGDVGFGKTEVAMRAAFVAVNDNKQVAILVPTTLLAQQHFENFKDRFADFPIEVGVLSRFNSPKEQKDTLEKMANGKLDIVIGTHKLIQADIIFNDLGLLIVDEEHRFGVRQKEKIKALRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAVKTFVRQRDVELIREAVLREIKRGGQVYFLHNNVETIERVAQEISEWVPEASVTSAHGQMREQELEQIMADFYHQKYNVLVCTTIIETGIDIPTANTIIMDRADKLGLAQLHQLRGRVGRSHHQAYAYLLTGDPKALSKDASKRLQAIESLEDLGAGFALATHDLEIRGAGELLGDDQSGQMQTIGFSLYMEMLEQAVKALREGKQTEVDLKLPALLPDDYIYDVNARLGMYKRVASCANVADMDELQVELIDRFGLLPDAAKNLFSLQQLKMRASDLGITKIEANPKGGYFEFSQ
>GAMMA2_P643873712 YP_002893425 Tola_2241 transcription-repair coupling factor [Tolumonas auensis TA 4, DSM 9187]
QLNGSSLSLAIAELVTPVVLVVNDTPTALYLEQEISFL-KE-NVRLFPDWETLPYDTFSPHQDIISQRIETLYHLGLLILPVATLMLRTAPAGFIDGYSLLVKPGDKLDLHNLRQRLEHAGYNAVEQVLEHGEYAARGSLLDLFPMGSSQPYRIDFFDDEVDTIRAFDPDTQRSHDPVKEVRLLPAHEFPTDKHWPAGIEYYLPLFFTLLDYLPSSSLEALQRFSL-GGRILFSVESEGRREALLELLAPIIVSPLEHGFILPDIALVCENELFGQSEAIVRNLAELTIGQPVVHLDHGVGRYLGLQTIDA-GIAAEYLTLEYAGADKLYVPVTSLHLISRYSGS--ENPPLHKLGGETWLKARKKAVEKIRDVAAELLDVYAKRAARPGLAFRHDKQAYSKFAAGFPFEETPDQLNAINSVLGDMCQAKAMDRLVCGDVGFGKTEVAMRATFVAVHAGKQVAVLVPTTLLAQQHYENFRDRFANWPVNIEVMSRFKSAKEQKAAMEALAEGKIDIIIGTHKLLSEDIRFKDLGLLVVDEEHRFGVRQKEKIKALRADVDILTLTATPIPRTLNMALSGMRDLSVIATPPAKRLAIKTFVRQYDKAVVREAILRELKRGGQVYYLHNNVETIDQTAALLSELIPEARIAIAHGQMRERDLERVMTDFYHQRYNLLVCTTIIETGIDVPSANTIIMDRADNLGLAQLHQLRGRVGRSHHQAYAYLLTPHPKQMTKDAVKRLEAIESLEDLGAGFVLATHDLEIRGAGELLGDEQSGQIESIGFTLYMEMLEQAVNSLKEGDHTDIELRVPALLPDDYIPDVNMRLSIYKRIASCNTQEEIDELKIELIDRFGLLPQSAQNLIQISRFRLLAKPLGLKRIEIGDRGGFIDFSQ
>GAMMA2_P639714580 YP_856534 AHA_2003 transcription-repair coupling factor [Aeromonas hydrophila hydrophila ATCC 7966]
QLTGSSLSLMAARLTQPVLLVTADTPSALRLEQELQYL-AD-TVLLFPDWETLPYDTFSPHQDIISQRLETLYKLGVLIVPISTLMLRTAPRVYLDKYSLMVKSGQRLNLQQLRARLAEAGYVAVEQVLEHGEFAARGSLLDLFPMGSSSPYRIDFFDDEVDSIRPFDPETQRSSEPVKSVSLLPAREFPTDEGWPAGIEYYLPLFFSLFDHLPDNTLLALNQFQG-AGRTLFAVESEGRREVLGDLLARLLVAPLERGFLLRELALITETELLGGSDAVIRNLGELTQGQPVVHLDHGVGRYLGLETIDA-GLPTEFLTLEYAGGDKLFVPVTSLHLISRYTGS--DNPPSHKLGGEAWVKARRKAAEKVRDVAAELLDVYAMRAARHGFAFKHDREAYRQFAAGFPFEETDDQLNAINAVLGDMCQAKSMDRLVCGDVGFGKTEVAMRAAFVAVHGGKQVAVLVPTTLLAQQHYDNFRDRFANWPVRVEVLSRFRSAKEQTAVMKELAEGKVDIIIGTHKLLGAELTFKDLGLLIVDEEHRFGVRQKEKIKALRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPAKRLAIKTFVRQQEPAVTREAVLRELKRGGQVYYLHNDVESIEKCAADLAELVPEARIGIAHGQMRERELERVMSDFYHQRFNLLVCTTIIETGIDVPSANTIIMDRADHLGLAQLHQLRGRVGRSHHQAYAYLLTPHPKLMTKDAAKRLEAIASLEDLGAGFALATHDLEIRGAGELLGDDQSGQIESVGFTLYMEMLEQAVEALKSGQHTEVELRLPALLPDDYIPDVNMRLSMYKRIASAADEQELRELKVELIDRFGLLPEPTKTLLELAAFRQRATALGIRRVEMSERGGYLDFTQ
>GAMMA2_P641524442 YP_001141704 ASA_1881 transcription-repair coupling factor [Aeromonas salmonicida salmonicida A449]
QLTGSSLSLVAARLTTPVLLVTADTPSALRLEQELQFLLC--PVLMFPDWETLPYDTFSPHQDIISQRLETLYKLGVLIVPISTLMLRCAPQVYLDKYSLMVKAGQRLNLQQLRGRLAEAGYVAVDQVLEHGEFAARGSLLDLFPMGSNSPYRIDFFDDEVDSIRPFDPETQRSSEPVKTVSLLPAREFPTDEAWPAGIEYYLPLFFSLFDYLPDNTLLALNQFLDFTGRTLFVVESEGRREVLGDLLARLLVAPLERGFLLQELALITETELLGGSDAVIRNLGELTQGQPVVHLDHGVGRYLGLETIDA-GLPTEFLTLEYAGGDKLFVPVTNLHLISRYTG--SDNPPSHKLGGEAWVKARRKAAEKVRDVAAELLDVYALRAARHGFAFQHDREAYRQFAAGFPFEETEDQLNAINAVLGDMCQAKSMDRLVCGDVGFGKTEVAMRAAFVAVHGGKQVAVLVPTTLLAQQHYDNFRDRFANWPVRVEVLSRFRTAREQTSVMKELADGKVDIIIGTHKLLGSDLTFKDLGLLIVDEEHRFGVRQKEKIKALRADVDILTLTATPIPRTLNMAMAGMRDLSIIATPPAKRLAIKTFVRQQDPAVTREAVLRELKRGGQVYYLHNDVESIEKCAGDLAELVPEARIGIAHGQMRERDLERVMSDFYHQRFNLLVCTSIIETGIDVPSANTIIMDRADHLGLAQLHQLRGRVGRSHHQAYAYLLTPHPKLMSKDALKRLEAIASLEDLGAGFALATHDLEIRGAGELLGDDQSGQIESVGFTLYMEMLEQAVEALKNGQHTEVELRLPALLPEEYIPDVNMRLSMYKRIASAADEQELRELKVELIDRFGLLPEATKTLMEIAAFRQRATALGIRRVEMSERGGYLDFTQ
>GAMMA2_P637129033 NP_873467 HD0975 transcription repair coupling factor [Haemophilus ducreyi 35000HP]
NLIGDADTLIIAQAATCTLVVTTDIRTALRLEKSLRQFS-QLPVAVFPDWETLPYDNFSPHQEIISARLSALFHLQILLLPVNTLLQKLCPPSYLANNVLLIKKGDRFSIDSLRLQLENAGYRAVEQVLEYGEYAVRGALFDLYPMGTSLPFRLDFFDDEIDSLRTFDVDTQRTISEIEQINLLPAHEFPTDQQLNGGIEYWQPLFFSLFDYLSPNTLQAFNQFRNFSGKIIFSVETEGRRETLLELLAPLLISPLDQGFIFEDYAVICETNLLGKPDTLIRNLAELKIGQAVVHLENGVGRYAGLTVLDT-GIKAEYLVLNYANDAKLYVPVAALHLISRYIGGADEQAPLHKLGSETWAKNRQKAVEKIHDIAAELLDIYAKRETQKGFKFAYDRDAFMQFSHSFPFEETEDQKLAIHAVISDMCQAKAMDRLICGDVGFGKTEVAMRATYLAVENHKQVAVLVPTTLLAQQHYEDFKDRFANYPINIEVLSRFKTAKEQKDILARVATHKVDILIGTHKLLQDNVKFHDLGLLVIDEEHRFSVRQKEKIKQLRANIDILTLTATPIPRTLNMALNGMRDLSIIASPPSRRLTIKTFVCQQDDTIIKEAILREILRGGQVYYLHNDVATIENCATKLAELVPEARIVIGHGQMRERDLERVMSDFYHQRFNLLVCSTIIETGIDVPTANTIIIEQANKFGLAQLHQLRGRVGRSHHQAYAYLLTPHPKTLTKDAQQRLEAISSIDNLGAGFVLATHDLEIRGAGELLGAEQSGQIESIGFSLYMDLLKNAVQALQNGSQVEIELRIPALLPDDYVPDVNMRLSFYKRIASTENKEGLKDLKIELIDRFGLLPEAAQNLFRITQLRHMAKQLDLKKIEMGVNGGYLEFKP
>GAMMA2_P640123015 YP_001054028 APL_1339 transcription-repair coupling factor [Actinobacillus pleuropneumoniae L20]
NLIGHADTLVIAQATELSVVVTPDTRTALRLEKALMQFS-KLPVSVFPDWETLPYDNFSPHQDIISARLSALFHLQIFLLPINTLLQKVCPPSYLANNVLLIKKGDRFSIQSLRLQLENAGYRAVEQVLEYGEYAVRGALLDLYPMGAESPFRLDFFDDEIDSIRTFDADSQRTIE-INEMNLLPAHEFPTDSNLNAGIEYWQPLFFSLFDYLAENTLETFNKFRGFDGRILFSVESEGRRETLLELLAPLIISPLDQGFIIEKLAIICETDFLGEPDTLIRNLAELKIGQAVVHLENGVGRYAGLTVLDA-GIKAEYLVLQYANEAKLYVPVASLHLISRYIGGADETAPLHKLGSEAWAKTRQKAAEKIRDVAAELLDVYAKRESQKGFAFAYDRDSFMQFSHTFPFEETEDQKTAINAVISDMCLPKAMDRLVCGDVGFGKTEVAMRATFLAVENHKQVAVLVPTTLLAQQHFENFKDRFANYPINVEVLSRFKTAKEQKAILEKVAEGKVDILVGTHKLLQEDVQFRDLGLLIIDEEHRFGVRQKEKIKQLRANVDILTLTATPIPRTLNMALNGMRDLSVIASPPARRLTIKTFVRQHDDLIVKEAILREILRGGQVYYLHNDVATIENCATKLAELVPEARIVIGHGQMRERELERVMSDFYHQRFNLLVCSTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPPKALTKDAQQRLEAISSIDNLGAGFVLATHDLEIRGAGELLGAEQSGQIESIGFSLYMDLLENAVKALQEGNQVDIELRIPALLPDDYVPDVNMRLSFYKRIASAESVEALKDLKVELIDRFGLLPEATKNLFQITQLRHLAKPLGLKKVDAGINGGYLEFKP
>GAMMA2_P643579643 YP_002476484 HAPS_2079 transcription-repair coupling factor [Haemophilus parasuis SH0165]
NLIGHSDTLAIVQTSQLTVVVTPDTRTALRLEKSLPSFT-KLPVQLFPDWETLPYDNFSPHQDIISARLSALFQLQIFLLPINTLLQKVCPPSYLANNVLLIKKGDRFSIEKLRLQLENAGYRAVEQVLEYGEYAVRGALLDLYPMGANSPYRLDFFDDEIDTIRTFDVDNQRTIEQIDAINLLPAHEFPTDSNLNAGIEYWQPLFFSLFDYLPEQTLASFLQFQQFKGQILFSVETEGRRETLLELLAPLLISPLDQGFIIQKLAIICETDLLGEPDTLIRNLAELKIGQAVVHLENGVGRYGGLTTLDA-GIKAEYLVLHYANDAKLYVPVASLHLISRYIGGTDENAPLHKLGSEAWAKTRQKAAEKIRDVAAELLDVYAKREAQKGFAFEYDRDAFVQFSNTFPFEETEDQKTAINAVISDMCLPKAMDRLVCGDVGFGKTEVAMRATFLAAMNHKQVAILAPTTLLAQQHFENFKDRFANYPINVEVLSRFKTAKAQKEILAKVADGKVDILVGTHKLLQEDVQFKDLGLLVIDEEHRFGVRQKERIKQLRANIDILTLTATPIPRTLNMALNGMRDLSIIASPPARRLSIKTFVRQSDDTVIKEAILREILRGGQVYYLHNDVATIENTAQQLAELVPEARIVIGHGQMRERELERVMSDFYHQRFNLLVCSTIIETGIDVPTANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYMLTPPPKTLTKDAQQRLEAMSTIDNLGAGFVLATHDLEIRGAGELLGSEQSGQIESLGFSLYMELLENAVKALQEGQQVDIELRVPALLPDDYLPDVNMRLSFYKRIASAESDEALKDLKIELIDRFGLLPEATKNLFQITQLRHLAKGLQLKKVDAGINGGYLEFKP
>GAMMA2_P637070663 NP_245978 PM1041 Mfd [Pasteurella multocida multocida Pm70]
NVLMGADCLAISQIAQLTVVVTADTRSAVRLEKVLAQFS-SLPVTFFPDWETLPYDAFSPHQDIISSRLSALSQLGIVILPISTLMQRLCPPTFLHHNLLLVKKSDRLQINKLRLQLESAGYRAVEQVLEHGEYAVRGALLDLFPMGSAVPFRLDFFDDEIDSIRTFDVDTQRTLEEIQAINLLPAHEFPTDEKLISGIEYWQPLFFSLFDYLPKNTLQQLRQFSDFKGKIVFSVESEGRRETLLDLLSPVLISGLENGFIIP-IAVMTETELLGEPDTLIRNLAELKIGQPVVHLDHGVGRYAGLVTLEN-GITAEYLLLNYANESKLYVPVSSLHLISRYVGGADETAPLHKLGSDAWVRARQKAAEKIRDVAAELLDVYAQREAQKGFAFHYDREAFQQFAATFPFEETVDQEMAINAVIADMCQAKAMDRLVCGDVGFGKTEVAMRAAFLAVMNHKQVAVLVPTTLLAQQHFENFKDRFANLPINVEVLSRFKTAKEQKVVLQNLAEGKVDILIGTHKLIQSDVQFKDLGLLVIDEEHRFGVRQKERIKQLRANIDILTLTATPIPRTLNMAMHGIRDLSIISTPPARRLTIKTFVKQSDESVIREAILREILRGGQVYYLHNDVASIENCAEKLRTLVPEARVTIGHGQMRERELERVMSDFYHQRFNVLVCSTIIETGIDVPTANTIIIERADNFGLAQLHQLRGRVGRSHHQAYAYLLTPPIKAMTKDAQKRLEALESLDNLGAGFILATHDLEIRGAGELLGSEQSGQIESIGFSLYMDLLESAVNALKAGQQVEIDLRLPALLPEDYLGDVNIRLSFYKRIAGAENKPELDELKVELIDRFGRLPEATTSLFRIAELRQLAKKIQIQKIDANAQGGFIEFAS
>GAMMA2_P638104724 YP_719373 HS_1161 transcription-repair coupling factor [Haemophilus somnus 129PT]
NVLQGADSLVIAEIVRLIFVMTPDVKSAVCLEKFLTEFT-QQPVTFFPDWETLPYDNFSPHQEIISARLSALFQLGIFIAPITTVMQRVCPAEFLQHNVLLIKRGDRLNIERFRLQLENAGYRAVEQVLEHGEFAVRGALLDLFPMGSAVPFRLDFFDDEIDSIRTFDVDTQRTLEEIQRINLLPAQEFPTDRKLVSGIEYWQPLFFTLFDYIPDNTLQKLRQFIEFDGTVIFSVETEGRRETLLDLLLPLLISSLEHGFIIDNVAIICETELLGEPDTLIRNLAELKIGQPVVHLEHGVGRYGGLVSLEN-GIKAEFLLLEYANNSKLYVPVTSLHLISRYVGGSDENAPLHKLGNDSWAKARHKAIEKIRDVAAELLDVYAQREVKKGFAFQYDKEEFKQFAATFPFEETPDQKMAINAVISDMCQEKAMDRLVCGDVGFGKTEVAMRAAFLAVMNHKQVAVLVPTTLLAQQHYENFKDRFANLPVNVEMLSRFRTAKEQKQILQHLNEGKIDILIGTHKLIQSEVKFSDLGLLIIDEEHRFGVSQKEKIKQLRTNIDILTLTATPIPRTLNMAMSGIRDLSIISTPPARRLSIKTFVRQVDDLIIREAVLREILRGGQVYYLHNDVASIENCAEKLTALVPEARVVVGHGQMRERELERVMSDFYHQRFNVLVCSTIIETGIDVPTANTIIIERADNFGLAQLHQLRGRVGRSHHQAYAYLLTPHPKAMTKDAVKRLEALESLDNLGAGFILATHDLEIRGAGELLGNEQSGQIESIGFSLYMELLENAVAALKEGQQVEIDLRVPALLPEEYLGDVNMRLSFYKRIAGAENQAELDELKVELIDRFGLLPEAGKNLMQIAELRLLAKTLKIVKIDSTINGGFIEFSE
>GAMMA2_P641658538 YP_001784898 HSM_1578 transcription-repair coupling factor [Haemophilus somnus 2336]
NVLQGADSLVIAEIVRLIFVMTPDVKSAVCLEKILTEFT-QQPVTFFPDWETLPYDNFSPHQEIISARLSALFQLGIFIAPITTVMQRVCPAEFLQHNVLLIKRGDRLNIERFRLQLENAGYRAVEQVLEHGEFAVRGALLDLFPMGSAVPFRLDFFDDEIDSIRTFDVDTQRTLEEIQRINLLPAQEFPTDRKLVSGIEYWQPLFFTLFDYIPENTLQKLRQFIEFDGTVIFSVETEGRRETLLDLLLPLLISSLEHGFIIDNVAIICETELLGEPDTLIRNLAELKIGQPVVHLEHGVGRYGGLVSLEN-GIKAEFLLLEYANNSKLYVPVTSLHLISRYVGGSDENAPLHKLGNDSWAKARHKAIEKIRDVAAELLDVYAQREVKKGFAFQYDKEEFKQFAATFPFEETPDQKMAINAVISDMCQKKAMDRLVCGDVGFGKTEVAMRAAFLAVMNHKQVAVLVPTTLLAQQHYENFKDRFANLPVNVEMLSRFRTAKEQKQILQHLNEGKIDILIGTHKLIQSEVKFSDLGLLIIDEEHRFGVSQKEKIKQLRTNIDILTLTATPIPRTLNMAMSGIRDLSIISTPPARRLSIKTFVRQVDDLIIREAVLREILRGGQVYYLHNDVASIENCAEKLTALVPEARVVVGHGQMRERELERVMSDFYHQRFNVLVCSTIIETGIDVPTANTIIIERADNFGLAQLHQLRGRVGRSHHQAYAYLLTPHPKAMTKDAVKRLEALESLDNLGAGFILATHDLEIRGAGELLGNEQSGQIESIGFSLYMELLENAVAALKEGQQVEIDLRAPALLPEEYLGDVNMRLSFYKRIAGAENQAELDELKVELIDRFGLLPEAGKNLMQIAELRLLAKTLKIVKIDSTINGGFIEFSE
>GAMMA2_P640609487 YP_001290602 CGSHiEE_04040 transcription-repair coupling factor [Haemophilus influenzae PittEE]
NVLPGADALAISEIAELTVVVTPDTRSAVRLSRVLSELS-SQNVCLFPDWETLPYDTFSPHQEIISSRLSALFHLGIFLLPISTLMQRLCPPQYLQHNVLLIKKGDRLVIDKMCLQLEAAGYRAVEQVLEHGEYAVRGSLLDLFPMGSAVPFRLDFFDDEIDSIRTFDVDTQRTLDEINSINLLPAHEFPTDDKLISGIEYWQPLFFTLFDYLPEQTLGQLRQLIE-HFNVLFSVETEGRRETLLDLLSPLLVSSLEQGFIIEQVAIIGEANLLGEPDTLVRNLAELKIGQPVVHLDHGVGRYGGLVTLDT-GIKAEYLLLNYANESKLYVPVTSLHLISRYVGGSDESAPLHKLGNEAWAKSRQKAAEKIRDVAAELLDVYAQREAKKGFAFKYDREEFQQFSATFPFEETYDQEMAINAVISDMCQPKAMDRLVCGDVGFGKTEVAMRAAFLAVMNHKQVAVLVPTTLLAQQHYENFKDRFANLPVNVEVLSRFKTAKEQKQILENLAEGKVDILIGTHKLIQSDVKFNDLGLLIIDEEHRFGVGQKEKIKQLRANIDILTLTATPIPRTLNMAMNGIRDLSIISTPPARRLSIKTFVRQNDDLVVREAILREILRGGQVYYLHNDVASIENTAEKLTTLVPEARVIVGHGQMRERELERVMSDFYHQRYNVLVCSTIIETGIDVPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAYLLTPPPKMMTKDAERRLDALENLDNLGAGFILATHDLEIRGAGELLGNEQSGQIESIGFSLYMELLDAAVKALKEGQQADIELRVPALLPDDYLGDVNMRLSFYKRIAAAESKAELDELKVELIDRFGLLPDATKNLLQITELRLLVEPLNVVRIDAGTQGGFIEFSA
>GAMMA2_P637008444 NP_439413 HI1258 transcription-repair coupling factor [Haemophilus influenzae Rd KW20]
NVLPGADALAISEISELTVVVTPDTRSAVRLSRVLSELS-SQDVCLFPDWETLPYDTFSPHQEIISSRLSALFHLGIFLLPISTLMQRLCPPQYLQHNVLLIKKGDRLVIDKMRLQLEAAGYRAVEQVLEHGEYAVRGALLDLFPMGSAVPFRLDFFDDEIDSIRTFDVDTQRTLDEISSINLLPAHEFPTDDKLISGIEYWQPLFFTLFDYLPEQTLGQLRQFIE-HFNVLFSVETEGRRETLLDLLSPLLVSSLEQGFIIEQVAIIGEANLLGKPDTLVRNLAELKIGQPVVHLDHGVGRYGGLVTLDT-GIKAEYLLLNYANESKLYVPVTSLHLISRYVGGSDESAPLHKLGNEAWAKSRQKAAEKIRDVAAELLDVYAQREAKKGFAFKYDREEFQQFSATFPFEETYDQEMAINAVISDMCQPKAMDRLVCGDVGFGKTEVAMRAAFLAVMNHKQVAVLVPTTLLAQQHYENFKDRFANLPVNVEVLSRFKTAKEQKQILENLAEGKVDILIGTHKLIQSDVKFNDLGLLIIDEEHRFGVGQKEKIKQLRANIDILTLTATPIPRTLNMAMNGIRDLSIISTPPARRLSIKTFVRQNDDLVVREAILREILRGGQVYYLHNDVASIENTAEKLTALVPEARVIVGHGQMRERELERVMSDFYHQRYNVLVCSTIIETGIDVPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAYLLTPPPKMMTKDAERRLDALENLDNLGAGFILATHDLEIRGAGELLGNEQSGQIESIGFSLYMELLDAAVKALKEGQQADIELRVPALLPDDYLGDVNMRLSFYKRIAAAESKAELDELKVELIDRFGLLPDATKNLLQITELRLLVEPLNVVRIDAGTQGGFIEFSA
>GAMMA2_P640807471 YP_001343867 Asuc_0557 transcription-repair coupling factor [Actinobacillus succinogenes 130Z]
NVLAGADCLAIAEIAALTVIVTQDSKSAVRLEKVLREIT-ATEICLFPDWETLPYDAFSPHQEIISARLSALFYLGILLLPVTTLMQRVCPPSFLQQNVLLIKNGDRFNIERLRLQLENAGYRTVEQVLEPGEFAVRGSLLDLFPMGSPLPFRLDFFDDEIDSIRTFDVETQRTLAEIPQINLLPAHEFPTDSKLVSGIEYWQPLFFTLFDYLPANSLQALRRFIE-SFKIVFSVETEGRRETLLDLLSPLWISSLDHGFILESIAVICETELLGDPDALIRNLAELKIGQPVVHLEHGVGRYGGLVTLEN-GVKAEYLLLTYANDAKLYVPVAGLHLISRYVGGNEETAPLHKLGSDAWSKARRKAAEKIRDVAAELLDVYAQREAQKGFAFQYEREEFQAFSATFPFEETFDQALAINAVISDMCQPKAMDRLICGDVGFGKTEVAMRAAFLAVMNHKQVAVLVPTTLLAQQHYENFRDRFANLPVNVEVLSRFKTAKEQKRVLADLADGKVDILIGTHKLIQSDVKFHDLGLLIIDEEHRFGVRQKERIKQLRANIDILTLTATPIPRTLNMAMNGIRDLSIISTPPARRLTIKTFVRQQDDLTVREAILREILRGGQVYYLHNDVASIENCAEKLTALVPEARVTVGHGQMRERELERVMTDFYHQRFNVLVCSTIIETGIDVPTANTIIIERADNFGLAQLHQLRGRVGRSHHQAYAYLLTPPPKLMTKDALKRLEALESLDNLGAGFVLATHDLEIRGAGELLGSEQSGQIESIGFSLYMELLEAAVTAMKEGQQVEIDLRVSALLPEDYLGDVNMRLSFYKRIAGAENKTALDELKVELIDRFGLLPEAAQNLMRIAELRTLAKQLKIIKIDGTATGGFIEFNP
>GAMMA2_P637549694 YP_087408 MS0216 Mfd protein [Mannheimia succiniciproducens MBEL55E]
NVLTGSDGLAICEMAELTVVVANDTKSAVRLEKILQESG-KLEVRYFPDWETLPYDSFSPHQDIISSRLSALFYLGILILSVSTLMQRICPPQYLQHNVLLIKKGDRLVIEKLRLQLENAGYRAVEQVMEHGEFAVRGALLDLFPMGSPLPFRLDFFDDEIDSIRTFDADTQRTLEEIRQINLLPAHEFPTDDKLVSGIEYWQPLFFTLFDYLPANTLQNLRHFIE-KFHIVFSVETEGRRETLLDLLSPLQISSLDNGFIIEQIAIICETELLGEPDTLIRNLAELKIGQPVVHLDHGVGRYGGLVTLEN-AIKAEYLLLTYANDAKLYVPVANLHLISRYVGGSEETAPLHKLGSDSWAKARRKAAEKIRDVAAELLDVYAQREAQKGFAFHYNREEFMQFSATFPFEETHDQEAAINAVISDMCQPKAMDRLVCGDVGFGKTEVAMRAAFLAVMNHKQVAVLVPTTLLAQQHYENFRDRFANLPVNVEMVSRFRTAKEQKKILEDLSAGKVDILIGTHKLIQSDVKFNDLGLLIIDEEHRFGVRQKEKIKQLRANVDILTLTATPIPRTLNMAMNGIRDLSIISTPPARRLTIKTFVRQADDLLIREAILREILRGGQVYYLHNDVASIENCAEKLTALVPEARIIIGHGQMHERELERVMTDFYHQRFNVLVCSTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAYLLTPPPKLMTKDAVKRLEALESLDNLGAGFILATHDLEIRGAGELLGSEQSGQIESIGFSLYMELLEAAVQAMKQGQQVEIDLRIPALLPEDYLGDVNMRLSFYKRIAGAENKPALDELKVELIDRFGLLPEATKNLMQITELRLMAKQLDIIRIDGSQNGGFIEFSP
>GAMMA2_P642577260 YP_002150634 PMI0877 transcription-repair coupling factor [Proteus mirabilis HI4320]
QLTGAACALECAEIIKLVVLVTRDMQNALRLQDEIRQFC-DYPVETLSDWETLPYDSFSPHQEIISNRLSTLYRIGILILPVNTLMQKVCPTDYLASHALIMSKGEQLSRDNLRKTFDEAGYRHVEQVLEHGEYATRGALLDLFPMGSEFPYRIDFFDDEIDSLRTFDVDTQRTLE-VEQIKLLPAHEFPTDPNLPAGIEYWQPLFFNLFAYFPQN--DNLRRFQEFSGSIVFSVESEGRRETVQDLLSRFIIGSAEHGFNYRQLALICESDMLGETDTLIRNLAELSPGQPVVHLQHGVGRYQGMTTLEA-GVKAEYLILSYAGDDKLYVPVSSLHLISRYSGGADENAPLHKLGGDAWTRARQKAAEKVRDVAAELLDVYAQRAVKSGFAFKLDKEQYHTFRQSFPFETTPDQEMAINAVLSDMCQAIAMDRLVCGDVGFGKTEVAMRAAFLAISNNKQVAILVPTTLLAQQHFENFRDRFANWPVNIEMISRFRSAKEQQQITEKLAEGTIDIVIGTHKLLQPGIQWKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLSVKTFVREYDDLVVREAILRETLRGGQVYYLYNDVENIEKARDRLAQLVPEARIGIGHGQMRERELERVMNDFHHQRFNVLLCTTIIETGIDIPSANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAYLLTPHPKAMTKDAHKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGQMNTVGFSLYMELLESAVEALKEGQQTEIELRMPVLLPDDYIPDVNVRLSFYKRIASAKDLNELNDLRAELIDRFGTLPDAGRNLLRNAAIRLSAMSLGISRIEAHDKGGFIEFGE
>GAMMA2_P637853025 YP_454755 SG1075 transcription-repair coupling factor [Sodalis glossinidius morsitans]
QLTGAAVAVECAAIVDPVLLITTDMQSALRLHDEILQFT-HHPVLTLPDWETLPYDSFSPHQEIISDRIATLYRLGVIILPVNTLMQRVCPHTFLHRHTLLMTKGQRLSRDTLRAQLEQAGYRSVDQVLEHGEFATRGALLDLYPMGSEEPYRIDFFDDEIDSLRIFDVDTQRTLQEMASINLLPAHEFPTDKALPAGIEYWQPLFFPLFSYLPADTLDKLRRFCEFDGPVIFSVESEGRRETLSELLARLIIGASERGFAPRARALICEGDLLGEAYTLIRNLAELHEGQPVVHLEHGVGRYAGMTTLEA-GIKAEYLILTYACNDKLYVPVSSLHLISRYAGGADENAPLHKLGGDAWTRARQKAAERVRDVAAELLDIYAQRAAKSGFAFRHNRENYQLFCEGFPFEPTVDQSQAINAVLSDMCQPLSMDRLICGDVGFGKTEVAMRAAFLAIENHKQVAVLVPTTLLAQQHFDNFRDRFANWPVRIEMISRFRSARDQAQVLEQTAEGKVDILIGTHKLLQSDVKWHDLGLLIVDEEHRFGVRHKERIKAMRAGVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLTVKTFVRQYDALVVREAILREVLRGGQVYYLYNDVENIEKAARCLETLVPEARIAIGHGQLRERELERVMNDFHHQRFNVLVCTTIIETGIDIANANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAYLLTPPPKALSQDAHKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGQMETIGFSLYMDLLESAVDALKAGQLTEVELRMPALLPEEYIPDVNTRLSLYKRIAIAADDREIEDLKVELIDRFGLLPDPARYLLAIAGLRQRAQSLGIRRIEGNDKGGFIEFSA
>GAMMA2_P637464586 NP_930049 plu2815 transcription-repair coupling factor (TRCF) [Photorhabdus luminescens laumondii TTO1]
QLTGAACAVECAEIIEPVVLITKDMQNALRLHDEIHQFT-DCSVDLLSDWETLPYDSFSPHQEIISNRLSTLYRLGVLILPINTLMQRVCPHEYLNGHALVMHKDQRLSRDKLRTELEQAGYRSVEQVLEHGEFATRGALLDLFPMGSEHPYRIDFFDDEIDSLRIFDVDSQRTLE-VKQINLLPAHEFPTDKELPAGIEYWQPLFFSLFDYLPDN--DKLRRFLEFSGRVIFSVESEGRKETLQELLSRLMIGAAEHGFTKNELALICESDMLGETDTLIRNLAELRPSQPVVHLEHGVGRYQGLTTLEA-GIKAEYLILSYAGNDKLYVPVSSLHLISRYAGGADENAPLHKLGGEAWNKARQKAAEKVRDVAAELLDIYAHRAVKPGFAFKHDWEQYQLFCQSFPFETTPDQEQAINAVLNDMCQPIAMDRLICGDVGFGKTEVAMRSAFLAVHNDKQVAVLVPTTLLAQQHFDNFRDRFANWPVRIEMISRFRSAKEQQQIVEMAAEGKVDIIIGTHKLLQSDLRWKDLGLLIVDEEHRFGVRHKEQIKAMRADVDILTLTATPIPRTLNMAMSSMRDLSIISTPPARRLAVKTFVREYDSLLVREAILREVLRGGQVYYLYNDVENIEKAKLRLEELVPEARIAIGHGQMRERDLERVMTDFHHQRFNVLICTTIIETGIDIPSANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAYLLTPHPKAMTTDAHKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGQMTTIGFTLYMELLESAVDALKAGSQTDVELRMPILLPDDYIPDVNMRLSFYKRIASAKDASELAELKVELIDRFGTLPDPGRHLLHSAAIRLLAQKLGIKRIEAHEKGGFIEFSE
>GAMMA2_P637378283 YP_049919 ECA1821 transcription-repair coupling factor [Erwinia carotovora atroseptica SCRI1043]
ELTGAACAVECAEIIELVVLIAPDMQNALRLRDEIQQFT-NQHVTTLPDWETLPYDSFSPHQEIISTRLSTLYQLGVLILPVNTLMQRVCPHSFLHGHALVLKKGQRLSRDKLRSQLEQAGYRSVDQVMEHGEYATRGALLDLFPMGSEEPYRIDFFDDEIDSLRLFDVDTQRTLNEVPHINLLPAHEFPTDKTWPAGIEYWQPLFFSLFSYFPSNTLDALRRFIE-QFQIIFSVESEGRRETLQELLTRLIIGASEHGFIDTLRALICESDLLGETDTLIRNLAELRPGQPVVHLEHGVGRYVGLTTLEA-GIKAEYLILTYAGEDKLYVPVSSLHLISRYAGGADENAPLHKLGGEAWSRARQKAAERVRDVAAELLDIYAQRAAKSGFAFKHDKTQYQLFCESFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHFDNFRDRFANWPVKIEMISRFRSAREQTQILKETQEGKVDILIGTHKLLQSDVHWHDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDNLMVREAILRETLRGGQVYYLYNDVENIEKATQRLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPSANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAMSTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGDDQSGQMTSVGFSLYMELLESAVDALKAGSQTDVELRLPALLPDDFIPDVNTRLSLYKRIASAKTLAELDELKVELIDRFGLLPDASRHLLQIAALRQQAQVLGIRRIEGNEKGGFIEFGE
>GAMMA2_P640937536 YP_001478229 Spro_1998 transcription-repair coupling factor [Serratia proteamaculans 568]
QLTGSACAVECAEIVEPVMLIAPDMQNALRLRDEIQQFT-DQMVTTLSDWETLPYDSFSPHQEIISARLSSLYHLGVIILPVNTLMQRVCPHEFLHGHALVMKKGQRLSRDKLRAQLEQAGYRSVDQVMEHGEFATRGALLDLFPMGSEEPYRIDFFDDEIDSLRTFDVDNQRTLSEVDAINLLPAHEFPTDKNWPAGIEYWQPLFFSLFSYLPDNTLDSLRHFIE-SFSIIFSVESEGRRETLQDLLGRMMVGASERGFLDGMRALICESDLLGETDVLIRNLAELHPGQPVVHLEHGVGRYVGLTTLEA-GIKAEYLILSYAGEDKLYVPVSSLHLISRYAGGADENAPLHKLGGDAWSRARQKAAERVRDVAAELLDIYAQRAAKTGFAFKHDREQYQLFCQAFPFETTPDQEQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENGKQVAVLVPTTLLAQQHFDNFRDRFATWPIRIEMMSRFRSAKEQQQVMDDAVDGKVDIIIGTHKLLQSDLRWKDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREVLRGGQVYYLYNDVENIEKAAAKLAELVPEARIAIGHGQMRERDLERVMNDFHHQRFNVLVCTTIIETGIDIPSANTIIIERADRFGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAMSTDAHKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGQMTTVGFSLYMELLESAVDALKNGNQTEVELRMPALLPDDYIPDVNTRLSFYKRIASAKNDGELEELKVELIDRFGLLPDPARNLLQSAALRQHAQLLGIKRIEGNERGGFIEFGE
>GAMMA2_P640075256 YP_001005995 YE1709 transcription-repair coupling factor [Yersinia enterocolitica enterocolitica 8081]
QLTGSACAVECAEIIEPVMLITPDMQTALRLRDEIQQFS-PRPVNTLSDWETLPYDSFSPHQDIISARLSCLYHLGVIILPINTLMQRVCPHEFLHGHALVMKKGQHLSRDKLRAQLEQAGYRSVDQVMEHGEFATRGALLDLYPMGSEEPYRIDFFDDDIDSLRVFDVDTQRTLSEVDQINLLPAHEFPIDKNWPAGIEYWQPLFFTLFSYLPENTLDNLRRFIE-SFSVVFSVESEGRRETLQDLLARLMIGASERGFLDTDLALICESDLLGETDTLIRNLAELRPGQPVVHLEHGVGRYLGLTTLEA-GIKAEYLILTYAGEDKLYVPVSSLHLISRYSGGADENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKSGFKFKFDREQYQLFCQSFPFETTPDQEQAINAVLSDMCRPLAMDRLVCGDVGFGKTEVAMRAAFLAVANNKQVAVLVPTTLLAQQHFDNFRDRFATWPVRIEMMSRFRSAKEQQVILEQAAEGKVDIIIGTHKLLQSDLRWQDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIEKATQKLAELVPEARIAIGHGQMRERDLERVMNDFHHQRFNVLVCTTIIETGIDIPSANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAYLLTPNPKAMTTDAKKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGQMTTIGFSLYMELLESAVDALKEGNQTEIEMRMPVLLPEDFIPDVNVRLSFYKRIASARDETELDELKVELIDRFGKLPDAARYLLHTAELRQQAQKLGIKRIEGNERGGFIEFGE
>GAMMA2_P637310231 NP_669101 y1784 transcription-repair coupling factor [Yersinia pestis KIM]
QLTGSACAVECAEIIEPVMLITPDMQTALRLRDEIQQFS-PQPVSTLSDWETLPYDSFSPHQDIISARLSCLYHLGVIILPINTLMQRVCPHEFLHGHALVMKKGQHLSRDKLRAQLEQAGYRSVEQVMEHGEFATRGALLDLYPMGSNEPYRIDFFDDDIDSLRVFDVDSQRTLVEVEQINLLPAHEFPIDKAWPAGIEYWQPLFFTLFSYLPENTLDNLRRFIE-SFSVVFSVESEGRRETLQDLLARLMVGASERGFLDTDLALICESDLLGETDTLIRNLAELRPGQPVVHLEHGVGRYLGLTTLEA-GIKAEYLILTYAGEDKLYVPVSSLHLISRYSGGADDNAPLHRLGSDVWSRARQKAAEKVRDVAAELLDIYAQRAVKSGFKFKHDREQYQLFCQSFPFETTPDQEQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVTNNKQVAVLVPTTLLAQQHFDNFRDRFATWPVRIEMLSRFRSAKEQQVILEQAAEGKIDILIGTHKLLQSDLHWHDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVIREAILREILRGGQVYYLYNDVENIEKVTQKLAELVPEARITIGHGQMRERDLERVMNDFHHQRFNVLVCTTIIETGIDIPSANTIIIERADHLGLAQLHQLRGRVGRSHHQAYAYLLTPNPKAMSTDAKKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGQMTTIGFSLYMELLESAVDALKEGNQTEIEMRMPVLLPEDFISDVNIRLSFYKRIASARNETELDELKVELIDRFGKLPDPARYLLHTAELRQQAQKLGIKRIEGNERGGFIEFGE
>GAMMA2_P637492433 NP_993104 YP_1754 transcription-repair coupling factor [Yersinia pestis bv Microtus, 91001]
QLTGSACAVECAEIIEPVMLITPDMQTALRLRDEIQQFS-PQPVSTLSDWETLPYDSFSPHQDIISARLSCLYHLGVIILPINTLMQRVCPHEFLHGHALVMKKGQHLSRDKLRAQLEQAGYRSVEQVMEHGEFATRGALLDLYPMGSNEPYRIDFFDDDIDSLRVFDVDSQRTLVEVEQINLLPAHEFPIDKAWPAGIEYWQPLFFTLFSYLPENTLDNLRRFIE-SFSVVFSVESEGRRETLQDLLARLMVGASERGFLDTDLALICESDLLGETDTLIRNLAELRPGQPVVHLEHGVGRYLGLTTLEA-GIKAEYLILTYAGEDKLYVPVSSLHLISRYSGGADDNAPLHRLGSDVWSRARQKAAEKVRDVAAELLDIYAQRAVKSGFKFKHDREQYQLFCQSFPFETTPDQEQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVTNNKQVAVLVPTTLLAQQHFDNFRDRFATWPVRIEMLSRFRSAKEQQVILEQAAEGKIDILIGTHKLLQSDLHWHDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVIREAILREILRGGQVYYLYNDVENIEKVTQKLAELVPEARITIGHGQMRERDLERVMNDFHHQRFNVLVCTTIIETGIDIPSANTIIIERADHLGLAQLHQLRGRVGRSHHQAYAYLLTPNPKAMSTDAKKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGQMTTIGFSLYMELLESAVDALKEGNQTEIEMRMPVLLPEDFISDVNIRLSFYKRIASARNETELDELKVELIDRFGKLPDPARYLLHTAELRQQAQKLGIKRIEGNERGGFIEFGE
>GAMMA2_P641596776 YP_001720452 YPK_1706 transcription-repair coupling factor [Yersinia pseudotuberculosis YPIII]
QLTGSACAVECAEIIEPVMLITPDMQTALRLRDEIQQFS-PQPVSTLSDWETLPYDSFSPHQDIISARLSCLYHLGVIILPINTLMQRVCPHEFLHGHALVMKKGQHLSRDKLRAQLEQAGYRSVEQVMEHGEFATRGALLDLYPMGSNEPYRIDFFDDDIDSLRVFDVDSQRTLVEVEQINLLPAHEFPIDKAWPAGIEYWQPLFFTLFSYLPENTLDNLRRFIE-SFSVVFSVESEGRRETLQDLLARLMVGASERGFLDTDLALICESDLLGETDTLIRNLAELRPGQPVVHLEHGVGRYLGLTTLEA-GIKAEYLILTYAGEDKLYVPVSSLHLISRYSGGADDNAPLHRLGSDVWSRARQKAAEKVRDVAAELLDIYAQRAVKSGFKFKHDREQYQLFCQSFPFETTPDQEQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVTNNKQVAVLVPTTLLAQQHFDNFRDRFATWPVRIEMLSRFRSAKEQQVILEQAAEGKIDILIGTHKLLQSDLHWHDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVIREAILREILRGGQVYYLYNDVENIEKVTQKLAELVPEARIAIGHGQMRERDLERVMNDFHHQRFNVLVCTTIIETGIDIPSANTIIIERADHLGLAQLHQLRGRVGRSHHQAYAYLLTPNPKAMSTDAKKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGQMTTIGFSLYMELLESAVDALKEGNQTEIEMRMPVLLPEDFISDVNIRLSFYKRIASARNKTELDELKVELIDRFGKLPDPARYLLHTAELRQQAQKLGIKRIEGNERGGFIEFGE
>GAMMA2_P640864579 YP_001400575 YpsIP31758_1598 transcription-repair coupling factor [Yersinia pseudotuberculosis IP 31758]
QLTGSACAVECAEIIEPVMLITPDMQTALRLRDEIQQFS-PQPVSTLSDWETLPYDSFSPHQDIISARLSCLYHLGVIILPINTLMQRVCPHEFLHGHALVMKKGQHLSRDKLRAQLEQAGYRSVEQVMEHGEFATRGALLDLYPMGSNEPYRIDFFDDDIDSLRVFDVDSQRTLVEVEQINLLPAHEFPIDKAWPAGIEYWQPLFFTLFSYLPENTLDNLRRFIE-SFSVVFSVESEGRRETLQDLLARLMVGASERGFLDTDLALICESDLLGETDTLIRNLAELRPGQPVVHLEHGVGRYLGLTTLEA-GIKAEYLILTYAGEDKLYVPVSSLHLISRYSGGADDNAPLHRLGSDVWSRARQKAAEKVRDVAAELLDIYAQRAVKSGFKFKHDREQYQLFCQSFPFETTPDQEQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVTNNKQVAVLVPTTLLAQQHFDNFRDRFATWPVRIEMLSRFRSAKEQQVILEQAAEGKIDILIGTHKLLQSDLHWHDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVIREAILREILRGGQVYYLYNDVENIEKVTQKLAELVPEARIAIGHGQMRERDLERVMNDFHHQRFNVLVCTTIIETGIDIPSANTIIIERADHLGLAQLHQLRGRVGRSHHQAYAYLLTPNPKAMSTDAKKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGQMTTIGFSLYMELLESAVDALKEGNQTEIEMRMPVLLPEDFISDVNIRLSFYKRIASARNETELDELKVELIDRFGKLPDPARYLLHTAELRQQAQKLGIKRIEGNERGGFIEFGE
>GAMMA2_P642634036 YP_001907935 ETA_20060 Transcription-repair coupling factor (ATP-dependent helicase mfd) [Erwinia tasmaniensis Et1/99]
QLTGAACAVECAEIAEPVMLIAQDMQNALRLQDEIKQFT-DQPVMALADWETLPFDSFSPHQEIISSRLSTLYQLGILILPVNTLMQRVCPHNFLHGHALVMQKGQRLSRDTLRAQLEQAGYRSVDQVMEHGEFATRGALLDLYPMGSERPYRIDFFDDEIDSLRLFDIDSQRTLEEVAAINLLPAHEFPTDKNLPAGIEYWQPLFFPLFSYLPANTLDALRHFLE-SFPVVFSVESEGRREALQELLARLLIGASEHGFIDGLRALICESDLLGEPDVLIRNLAELHPGQPVVHLEHGVGRYIGLTTLET-GIQAEYLMLAYAGDAKLYVPVSSLHLISRYAGGAEENAPLHKLGSDAWSRARQKAAEKVRDVAAELLDIYAQRAAKTGFAFKHDKQQYQLFCESFPFETTIDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHYDNFRDRFANWPIRIEMMSRFRTAKEQAQVLADAQEGKVDILIGTHKLLQNEIKWRDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDDLSVREAILREVLRGGQVYYLYNDVENIEKAATRLSELVPEARVAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADRFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKSMTTDAHKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEGQSGQMETIGFSLYMDLLENAVDALKEGSQTDIELRMPALLPDDYIPDVNTRLSFYKRIASAQHNDDLDDIKVELIDRFGLLPDAARNLLDIAALRLAAIKLGVRKVEASEKGGFIEFSE
>GAMMA2_P640900381 YP_001438315 ESA_02230 transcription-repair coupling factor (mfd) [Enterobacter sakazakii ATCC BAA-894]
ELTGAACAVEVAEMAEPLVLIAPDMQTALRLHDEIQQFT-ESLVMNLADWETLPYDSFSPHQEIISSRLSTLYQLGVLILPVNTLMQRVCPHSFLHGHALVMQKGQQLSRDTLRAQLDQAGYRHVDQVMAHGEYATRGALLDLYPMGSEQPYRIDFFDDEIDSLRLFDVDTQRTLEEVEAINLLPAHEFPTDKALPAGIEYWQPLFFPLFSYFPKNTLDSLRRFLE-TFPVIFSVESEGRREALSELLSRLSIGASERGFIDTLRAFICESDLLGEPDTLIRNLAELRPGQPVVHLEHGVGRYAGLTTLEA-GITAEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSKARQKAAEKVRDVAAELLDIYAQRAAKSGFAFKHDKEQYQLFCEGFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENNKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIELLSRFRSAKEQAQVLEQAAEGKVDILIGTHKLLQSDVKMKDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDNLVVREAILREVLRGGQVYYLYNDVENIQKAAERLANLVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPPPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGQMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPEAFIPDVNTRLSFYKRIASAKKEQELEEIKVELIDRFGLLPDPARNLLDIAALRQQAQKLGVRKIEANEKGGTIEFAE
>GAMMA2_P643366293 YP_002239264 KPK_3442 transcription-repair coupling factor [Klebsiella pneumoniae 342]
ELTGAACATLVAEMAEPVVLVAPDMQNALRLNDEIRQFT-DSMVMGLADWETLPYDSFSPHQDIISSRLATLYQLGVLIVPVSTLMQRVCPHSFLHGHALVMKKGQRLSRDALRDQLEGAGYRHVDQVMEHGEYATRGALLDLFPMGSDQPYRLDFFDDEIDSLRLFDVDSQRTLEEVAAINLLPAHEFPTDQTLPAGIEYWQPLFFPLFSYFPASTLDNLRRFLEFTGPVIFSVESEGRREALSEMLARLMIGAAEHGFIDSQLALICESDLLGEPDILIRNLAELHIGQPVVHLEHGVGRYAGMTTLEA-GITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWTRARQKAAEKVRDVAAELLDIYAQRAAKAGFAFKHDREQYQLFCDGFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMLSRFRSAKEQAQILEQAAEGKIDILIGTHKLLQSEVKLRDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDALVVREAILRETLRGGQVYYLFNDVENIQKAADKLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGQMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKNELDLEEIKVELIDRFGRLPDAARNLLDIARLRQQAQKLGIRKLESNEKGGVIEFNE
>GAMMA2_P640798155 YP_001334775 KPN_01112 transcription-repair ATP-dependent coupling factor [Klebsiella pneumoniae pneumoniae MGH 78578]
ELTGAACATLVAEMAEPVVLVAPDMQNALRLNDEIRQFT-DSMVMGLADWETLPYDSFSPHQDIISSRLATLYQLGVLIVPVSTLMQRVCPHSFLHGHALVMKKGQRLSRDALRDQLEGAGYRHVDQVMEHGEYATRGALLDLFPMGSDQPYRLDFFDDEIDSLRLFDVDSQRTLEEVAAINLLPAHEFPTDQTLPAGIEYWQPLFFPLFSYFPASTLDNLRRFLEFTGPVIFSVESEGRREALSEMLARLMIGAAEHGFIDSQLALICESDLLGEPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEA-GITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWTRARQKAAEKVRDVAAELLDIYAQRAAKAGFAFKHDREQYQLFCDGFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMLSRFRSAKEQAQILEQAAEGKIDILIGTHKLLQSEVKLRDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDALVVREAILRETLRGGQVYYLFNDVENIQKAADKLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGQMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKNEQDLEEIKVELIDRFGRLPDAARNLLDIARLRQQAQKLGIRKLESNEKGGVIEFNE
>GAMMA2_P640491818 YP_001176359 Ent638_1629 transcription-repair coupling factor [Enterobacter sp. 638]
ELTGAACATLVAEIAEPVVLVAPDMQNALRLHDEIRQFT-DSLVFNLADWETLPYDSFSPHQEIISSRLSTLYQLGVLIVPVNTLMQRVCPHSYLHGHALVMKKGERLSRDALRSQLDSAGYRHVDQVMEHGEYATRGALLDLYPMGSDQPYRLDFFDDEIDSLRVFDADTQRTLEEVDAINLLPAHEFPTDKTLPAGIEYWQPLFFALFSYFPAKTLDNLRKFLEFTGPVIFSVESEGRREALGELLARLMIGAAEHGFIDTLRALICESDLLGEPDTLIRNLAELHVGQPIVHLEHGVGRYAGMTTLET-GIKGEYLMLTYSGDAKLYVPVSSLHLISRYAGGAEDNAPLHRLGGDVWARARQKAAEKVRDVAAELLDIYAQRAAKSGYAFKHDKEQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRATFLAVENNKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMLSRFRSAKEQTQILEQAREGKIDILIGTHKLLQSDVKWKDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREVLRGGQVYYLFNDVENIQKTADKLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIVIERADHFGLAQLHQLRGRVGRSHHQAYAWLMTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGSMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKKESELEEIKVELIDRFGLLPDPARNLLDIARLRQQAQKLGIRKLEGNEKGGTVEFAE
>GAMMA2_P643702362 YP_002382435 EFER_1278 transcription-repair coupling factor [Escherichia fergusonii UMN026, ATCC 35469]
ELTGAACATLVAEIAEPVVLIAPDMQNALRLHDEISQFT-DQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLGVLIVPVNTLMQRVCPHSFLHGHALMMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSDLPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKALPAGIEYWQPLFFPLFSYFPANTLDALRKFLEFDGPVVFSVESEGRREALGELLARLMIGAAEHGFIDTVLALICESDLLGEPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEA-GITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQNDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGLIEFAE
>GAMMA2_P640434368 YP_403622 SDY_2036 transcription-repair coupling factor [Shigella dysenteriae Sd197]
ELTGAACATLVAEIAEPVVLIAPDMQNALRLHDEISQFT-DQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLGVLIVPVNTLMRRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPIDKALPAGIEYWQPLFFPLFSYFPANTLDALRKFLEFDGPVVFSVESEGRREALGELLARLMIGAAEHGFVDKVLALICESDLLGEPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEA-GITGEYLMLTYANDAKLYVPVSSLHLISRYAGGVEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHEREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMLSRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVNILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEATASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAE
>GAMMA2_P641601893 YP_001725445 EcolC_2487 transcription-repair coupling factor [Escherichia coli ATCC 8739]
ELTGAACATLVAEIAEPVVLIAPDMQNALRLHDEISQFT-DQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKALPAGIEYWQPLFFPLFSYFPANTLDALRKFLEFDGPVVFSVESEGRREALGELLARLMIGAAEHGFVDTVLALICESDLLGEPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEA-GITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDVARLRQQAQKLGIRKLEGNEKGGVIEFAE
>GAMMA2_P638074910 YP_688648 SFV_1134 transcription-repair coupling factor [Shigella flexneri 5 8401]
ELTGAACATLVAEIAEPVVLIAPDMQNALRLHDEISQFT-DQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLGILIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKALPAGIEYWQPLFFPLFSYFPANTLDALRKFLEFDGPVVFSVESEGRREALGELLARLMIGAAEHGFVDKALALICESDLLGEPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEA-GITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIADEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAE
>GAMMA2_P637423295 NP_836818 S1198 transcription-repair coupling factor [Shigella flexneri 2a 2457T]
ELTGAACATLVAEIAEPVVLIAPDMQNALRLHDEISQFT-DQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLGILIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKALPAGIEYWQPLFFPLFSYFPANTLDALRKFLEFDGPVVFSVESEGRREALGELLARLMIGAAEHGFVDKALALICESDLLGEPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEA-GITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAE
>GAMMA2_P641726231 YP_001880716 SbBS512_E2209 transcription-repair coupling factor [Shigella boydii CDC 3083-94]
ELTGAACATLVAEIAEPVVLIAPDMQNALRLHDEISQFT-DQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRYVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKALPAGIEYWQPLFFPLFSYFPANTLDALRKFLEFDGPVVFSVESEGRREALGELLARLMIGAAEHGFVDKVLALICESDLLGEPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEA-GITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDVARLRQQAQKLGIRKLEGNEKGGVIEFAE
>GAMMA2_P637807659 YP_408365 SBO_1947 transcription-repair coupling factor [Shigella boydii Sb227]
ELTGAACATLVAEIAEPVVLIAPDMQNALRLHDEISQFT-DQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKALPAGIEYWQPLFFPLFSYFPANTLDALRKFLEFDGPVVFSVESEGRREALGELLARLMIGAAEHGFVDKVLALICESDLLGEPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEA-GITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDVARLRQQAQKLGIRKLEGNEKGGVIEFAE
>GAMMA2_P637014475 NP_415632 b1114 transcription-repair coupling factor [Escherichia coli K12]
ELTGAACATLVAEIAEPVVLIAPDMQNALRLHDEISQFT-DQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKALPAGIEYWQPLFFPLFSYFPANTLDALRKFLEFDGPVVFSVESEGRREALGELLARLMIGAAEHGFVDTVLALICESDLLGEPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEA-GITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSMVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAE
>GAMMA2_P640428940 YP_310094 SSON_1134 transcription-repair coupling factor [Shigella sonnei Ss046]
ELTGAACATLVAEIAEPVVLIAPDMQNALRLHDEISQFT-DQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFPTDKALPAGIEYWQPLFFPLFSYFPANTLDALRKFLEFDGPVVFSVESEGRREALGELLARLMIGAAEHGFVDKVLALICESDLLGEPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEA-GITGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKERIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKTENELEEIKVELIDRFGLLPDPARTLLDIARLRQQAQKLGIRKLEGNEKGGVIEFAE
>GAMMA2_P640915902 YP_001453500 CKO_01937 transcription-repair coupling factor (mfd) [Citrobacter koseri ATCC BAA-895]
ELTGAACATLVAEIAEPIVLIAPDMQNALRLHDEVRQFT-DQLVMNLADWETLPYDSFSPHQEIISSRLSTLYQLGVLIVPVNTLMQRVCPHSYLHGHALVMKKGQRLSRDALRAQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSEQPYRLDFFDDEIDSLRLFDADTQRTLEEVDAINLLPAHEFPTDKTLPAGIEYWQPLFFPLFSYFPANTLDALRRFLEFNGPVIFSVESEGRREALGELLARLMIGAAEHGFIDTQLALICESDLLGEPDTLIRNLAELHPGQPVVHLEHGVGRYAGMTTLEA-GIKGEYLMLTYANDARLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHFDNFRDRFANWPVRIEMLSRFRSAKEQAQILEQVAEGKIDILIGTHKLLQSDVKLKDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDNLVVREAILREVLRGGQVYYLYNDVENIQKAADRLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEDQSGQMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKNENELEELKVELIDRFGLLPDPARNLLDIARLRQQAQKLGIRKLEGNEKGGTIEFAE
>GAMMA2_P637640039 YP_216153 SC1166 transcription-repair coupling factor [Salmonella enterica enterica sv Choleraesuis SC-B67]
ELTGAACATLVAEIAEPVVLIAPDMQNALRLHDEIRQFT-DQMVMNLADWETLPYDSFSPHQEIISSRLSTLYQLGVLIVPVNTLMQRVCPHSYLHGHALVMKKGQRLSRDALRAQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSEQPYRLDFFDDEIDSLRLFDADTQRTLEEVEAINLLPAHEFPTDKALPAGIEYWQPLFFPLFSYFPANTLDALRKFLEFSGPVIFSVESEGRREALGELLARLMIGAAEHGFIDTQLALICESDLLGEPDTLIRNLAELHVGQPVVHLEHGVGRYAGMTTLEA-GIKGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEESAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMLSRFRSAKEQTQILAEAAEGKIDILIGTHKLLQSDVKLRDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKNENELEEIKVELIDRFGLLPDPARNLLDIARLRQQAQKLGIRKLEGNEKGGTIEFAE
>GAMMA2_P637211957 NP_460186 STM1216 transcription-repair coupling factor [Salmonella typhimurium LT2]
ELTGAACATLVAEIAEPVVLIAPDMQNALRLHDEIRQFT-DQMVMNLADWETLPYDSFSPHQEIISSRLSTLYQLGVLIVPVNTLMQRVCPHSYLHGHALVMKKGQRLSRDALRAQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSEQPYRLDFFDDEIDSLRLFDADTQRTLEEVEAINLLPAHEFPTDKALPAGIEYWQPLFFPLFSYFPANTLDALRKFLEFSGPVIFSVESEGRREALGELLARLMIGAAEHGFIDTQLALICESDLLGEPDTLIRNLAELHVGQPVVHLEHGVGRYAGMTTLEA-GIKGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEESAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMLSRFRSAKEQTQILAEAAEGKIDILIGTHKLLQSDVKLRDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKNENELEEIKVELIDRFGLLPDPARNLLDIARLRQQAQKLGIRKLEGNEKGGTIEFAE
>GAMMA2_P637405467 NP_805480 t1704 transcription-repair coupling factor [Salmonella enterica enterica sv Typhi Ty2]
ELTGAACATLVAEIAEPVVLIAPDMQNALRLHDEIRQFT-DQMVMNLADWETLPYDSFSPHQEIISSRLSTLYQLGVLIVPVNTLMQRVCQHSYLHGHALVMKKGQRLSRDALRAQLDSAGYRHVDQVMEHGEYATRGALLDLFPMGSEQPYRLDFFDDEIDSLRLFDADTQRTLEEVEAINLLPAHEFPTDKALPAGIEYWQPLFFPLFSYFPANTLDALRKFLEFSGPVIFSVESEGRREALGELLARLMIGAAEHGFIDTQLALICESDLLGEPDTLIRNLAELHVGQPVVHLEHGVGRYAGMTTLEA-GIKGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEESAPLHKLGGDAWSRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMLSRFRSAKEQTQILAEAAEGKIDILIGTHKLLQSDVKLRDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVREAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTADAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGQQTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKNENELEEIKVELIDRFGLLPDPARNLLDIARLRQQAQKLGIRKLEGNEKGGTIEFAE
>GAMMA2_P637587096 YP_130579 PBPRA2392 putative transcription-repair coupling factor [Photobacterium profundum SS9]
NLSGAALALSVAELSHPILAVVPDTQTALRLQPEISQFT-SVEVNVFPDWETLPYDNFSPHQDITSDRLARLYKLGIILVPISTLLQRLTPRDYLRKHALIVRNGDRLSLDKLRLQLEASGYRHAEQVMEHGEYASRGSLLDLFPMGSNQPYRIDFFDDKVDSIRQFDPENQRSTGEIDSINLLPAHEFPTDEIWPAGIEYWQPLFFTLFDYLPDETLAALRRFTEFKGKIVFSVASEGRREALLDLLARLVIGAAEQGFESPSVAFICESDLLGEADTIIRNLAELQVGQPVVHIDHGIGRYQGLQTLEA-GITTEYVMLEYDAGAKLYVPVASLHLISRYSGGADDSAPLHKLGGEAWVKARKKAAEKVRDVAAELLDVYAKRELKPGFKFTLDRESYADFCSGFPFEETHDQALAINSVLSDMCKPRAMDRLVCGDVGFGKTEVAMRAAFVAIDNNKQVTVLVPTTLLAQQHFENFRDRFANTAVRVEVLSRFKTAKEQKQIMLDAEEGKIDILIGTHKLLNASVKYHDLGLLVVDEEHRFGVRQKEKIKAIRADIDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAIKTFVREKDDAIIREAVLREIMRGGQVYFLHNEVDSIEKTTEELAKLIPEARITFAHGQMRERDLEKVMGDFYHQRFNLLVCTTIIETGIDIPTANTIIMNRADNLGLAQLHQLRGRVGRSHHQAYAYLLTPHKKRMTKDAVKRLEAIESLEDLGAGFTLATHDLEIRGAGELLGDEQSGQIQSIGFSLFMEMLEQAVEALKEGKQTEVELRLPALLPDDYIPDINMRLSLYKRIASAIDEQDLNDLKVELIDRFGLLPEATTNLLTVNNLKLKAAAVGIRRIEAGEKGGYLEFEQ
>GAMMA2_P643381974 YP_002265012 VSAL_II0696 transcription-repair coupling factor [Aliivibrio salmonicida LFI1238]
NLTGSSLALAIAEIEQPIVVAVTEPQLAFRLQNEINQFS-QQSVEVFPDWETLPYDSFSPHQDIISDRLSRLYHLGTLIVPVSTLLQRQSPQSFLHKHALVVKVGDHLSFDKLKLQLEKSGYLHVDQVMSHGEYASRGSILDLFPMGNSLPYRIDFFDDEIDTIRQFDPDNQRTIEEVKSINLLPAHEFPTDDVWPAGIEYWQPLFFTLFDYLPDNTLAQFRQFYEFSGQVIFSVESEGRREALLELLARLVIGSAERGFQNPCVAFICESDLLGESNTIIRNLAELKVGQPVVHLDHGIGRYMGLQTLDV-GMPAEYMMLEYLNETKLYVPVSSLNLISRYSAGADDSAPISKLGSDAWGKARRKAAEKVRDVAAELLDVYAKRAIKLGFAFKQDKEAYADFRSSFPFEETHDQEIAINDVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFLATNNEKQVAVLVPTTLLAQQHFENFRDRFANFPIRVEVLSRFKSAKEQKEILAATAEGKVDILIGTHKLLQDSIKFDDLGLLVVDEEHRFGVRQKEKVKAMRSDVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAIKTFVREKADDVIKEAILREIKRGGQVYVLHNNVETIESAAKDIENLIPEARVTLAHGQMRERELERIMGDFYHQRFNVLVCTTIIETGIDVPTANTIIMERADKLGLAQLHQLRGRVGRSHHQAYAYLLTPHPKALSKDAVKRLDAIASLEDLGAGFTLATHDLEIRGAGELLGDGQSGQIQSVGFTLYMEMLEQAVEALKEGEQTEVELRLPALIPEEYIPDVNTRLSLYKRIASVSSNGELDELKVEIIDRFGSLPEAAQTLLISAEVKMLAASIKVKKLEAHGNGGYIEFEP
>GAMMA2_P642782401 YP_002158058 VFMJ11_A0509 transcription-repair coupling factor [Vibrio fischeri MJ11]
NLTGSSLALAIAEIEQPIIVAVTEPQLAFRLQNEINQFS-QNAVDVFPDWETLPYDSFSPHQDIISDRLSRLYHLGTLIVPVSTLLQRQSPQSFLHKHALVVNVGDRLSFDKLKLQLEKSGYLHVDQVMSHGEYASRGSIIDLFPMGNGHPFRIDFFDDEIDSIRQFDPENQRTIEEVKSINLLPAHEFPTDDEWPAGVEYWQPLFFTLFDYLPDNTLAQFRQFYEFSGQVIFSVESEGRREALLELLARLVIGSAERGFILQDVAFICESDLLGESDTIIRNLAELKIGQPVVHLDHGIGRYMGLQTLDV-GMPAEYMMLEYQDQAKLYVPVSSLNLISRYSAGADETAPIHKLGGEAWTKARRKAAEKVRDVAAELLDVYAKRAIKPGFAFKQDREAYADFKASFPFEETHDQDIAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFLATHNEKQVAVLVPTTLLAQQHFENFRDRFANFPIRVEVLSRFKSAKEQKEILAATAEGKVDILIGTHKLLQDSIKFDDLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAIKTFVREKADDVIKEAILREIKRGGQVYVLHNNVDTIQNAAEEIEKLIPEARVTLAHGQMRERELEKIMGDFYHQRFNVLVCTTIIETGIDVPTANTIIMDRADKLGLAQLHQLRGRVGRSHHQAYAYLLTPHPKALSKDARKRLDAIASLEDLGAGFTLATHDLEIRGAGELLGDGQSGQIQSVGFTLYMEMLEQAVEALKEGEQTEVELRLPSLIPEDYIPDVNTRLSLYKRIASVSSNGELDELKVEIIDRFGTLPEATQTLLISSEVKMLAASLKVKKLEAHGNGGYIEFEP
>GAMMA2_P643814014 YP_002810567 VCM66_1810 transcription-repair coupling factor [Vibrio cholerae M66-2]
NLHGASLALAIAELANHTLLAVPDPQTALKLLHEVEQFH-SE-VALFPDWETLPYDNFSPHQDIISDRISRLYQLGITIVPVSTLLQRQSPRDFLLQHTLIVKRGDHFSLDKLRLQLENSSYRHVDQVFGPGEYASRGSILDLFPMGSSDPFRIDFFDDEIDTIRTFDPDNQRSIE-MDEIRLLPAHEFPTTAAWPAGIEYWQPLFFTLFDYLPANSQAALRQFSEFTGKIIFSVESEGRREALLELLQRLVLGSAERGFIYGDVALICESDLLGDSDAVIRNLAELKPGQPVVHIDHGIGRYLGLQTLEA-GMVSEYVMLEYQNEAKLYVPVSSLNLISRYSGGAEEAAQLHKLGGEAWVKARRKAAEKVRDVAAELLDVYAKREIKPGFKFHLDREQYATFKATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLLSSEIRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAIKTFVRQSEDSVIREAVLREIMRGGQVYFLHNQVETIDKVAADLEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTANTIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGAGFTLATHDLEIRGAGELLGEEQSGQIQSVGFTLYMEMLEQAVEALKSGEQTEVEMRLPALLPEEYIPDINTRLSMYKQIASVASKDELAELKVELIDRFGKLPDAALNLLAIAELKLNAMRLKVRKIEAHERGGYVEFYP
>GAMMA2_P637048358 NP_231520 VC1886 transcription-repair coupling factor [Vibrio cholerae O1 bv eltor N16961]
NLHGASLALAIAELANHTLLAVPDPQTALKLLHEVEQFH-SE-VALFPDWETLPYDNFSPHQDIISDRISRLYQLGITIVPVSTLLQRQSPRDFLLQHTLIVKRGDHFSLDKLRLQLENSSYRHVDQVFGPGEYASRGSILDLFPMGSSDPFRIDFFDDEIDTIRTFDPDNQRSIE-MDEIRLLPAHEFPTTAAWPAGIEYWQPLFFTLFDYLPANSQAALRQFSEFTGKIIFSVESEGRREALLELLQRLVLGSAERGFIYGDVALICESDLLGDSDAVIRNLAELKPGQPVVHIDHGIGRYLGLQTLEA-GMVSEYVMLEYQNEAKLYVPVSSLNLISRYSGGAEEAAQLHKLGGEAWVKARRKAAEKVRDVAAELLDVYAKREIKPGFKFHLDREQYATFKATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNGKQVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKLLSSEIRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAIKTFVRQSEDSVIREAVLREIMRGGQVYFLHNQVETIDKVAADLEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTANTIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGAGFTLATHDLEIRGAGELLGEEQSGQIQSVGFTLYMEMLEQAVEALKSGEQTEVEMRLPALLPEEYIPDINTRLSMYKQIASVASKDELAELKVELIDRFGKLPDAALNLLAIAELKLNAMRLKVRKIEAHERGGYVEFYP
>GAMMA2_P637362409 NP_760939 VV12078 Transcription-repair coupling factor [Vibrio vulnificus CMCP6]
QLPGASLALSVAELANHTVLIVPDPQTALKLQSEIEQFT-AH-VTIFPDWETLPYDNFSPHQEIISDRIATLYQLGITIVPVSTLLQRQSPRDFLLQHTLMVNVGDRYSLEKLRLQLDNSGYRHVDQVFGPGEYASRGSILDLFPMGSRDPYRIDFFDDEIDTIRTFDPENQRSIEEIQQIRLLPAHEFPTTEAWPAGIEYWQPLFFTLFDYINRDSQAQLRQFSEFSGKIIFSVESEGRREALSELLQGLVIGASEHGFNTLNFAFICESDLLGDSDTVIRHLAELKPGQPVVHIDHGIGRYIGLETLEA-GIKAEYVMLEYQNEAKLYVPVASLNLISRYSGGAEESAPIHKLGSDAWTRARRKAAEKVRDVAAELLDVYAKRELKPGYKFVLDRGQYATFKSGFPFEETDDQSMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNDKQVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQIMEDVANGKVDILVGTHKLLSSDLKFSDLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAIKTFVRESDDAVVREAILREIMRGGQVYFLHNQVETIEKVAEDLTKLVPEARVTIAHGQMRERELERVMNDFYHQRFNLLVCTTIIETGIDVPTANTIIMDRADNLGLAQLHQLRGRVGRSHHQAYAYLLTPHPKSMTKDAIKRLDAIASLEDLGAGFTLATHDLEIRGAGELLGDEQSGQIQSIGFTLYMEMLEQAVQALKEGEQTEVEIRIPALLPDDYIPDVNTRLSMYKRVASVADLEELNEVKVELIDRFGLLPEAAKNLLAVAELKLSAHRIKAKKIEAHDKGGFIEFYP
>GAMMA2_P637469126 NP_935158 VV2365 transcription-repair coupling factor [Vibrio vulnificus YJ016]
QLPGASLALSVAELANHTVLIVPDPQTALKLQSEIEQFT-AH-VTIFPDWETLPYDNFSPHQEIISDRIATLYQLGITIVPVSTLLQRQSPRDFLLQHTLMVNVGDRYSLEKLRLQLDNSGYRHVDQVFGPGEYASRGSILDLFPMGSRDPYRIDFFDDEIDTIRTFDPENQRSIEEIQQIRLLPAHEFPTTEAWPAGIEYWQPLFFTLFDYINRDSQAQLRQFSEFSGKIIFSVESEGRREALSELLQGLVIGASEHGFIHNTFAFICESDLLGDSDTVIRHLAELKPGQPVVHIDHGIGRYIGLETLEA-GIKAEYVMLEYQNEAKLYVPVASLNLISRYSGGAEESAPIHKLGSDAWTRARRKAAEKVRDVAAELLDVYAKRELKPGYKFVLDRGQYATFKSGFPFEETDDQSMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNDKQVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQIMEDVANGKVDILVGTHKLLSSDLKFSDLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAIKTFVRESDDAVVREAILREIMRGGQVYFLHNQVETIEKVAEDLTKLVPEARVTIAHGQMRERELERVMNDFYHQRFNLLVCTTIIETGIDVPTANTIIMDRADNLGLAQLHQLRGRVGRSHHQAYAYLLTPHPKSMTKDAIKRLDAIASLEDLGAGFTLATHDLEIRGAGELLGDEQSGQIQSIGFTLYMEMLEQAVQALKEGEQTEVEIRIPALLPDDYIPDVNTRLSMYKRVASVADLEELNEVKVELIDRFGLLPEAAKNLLAVAELKLSAHRIKAKKIEAHDKGGFIEFYP
>GAMMA2_P643521781 YP_002417670 VS_2069 transcription-repair coupling factor [Vibrio splendidus LGP32]
NLVGSSLALTIAKLAEHTLLAVPDPQIALKLQSEIEQFT-AHEVALFPDWETLPYDSFSPHQEIISDRIARLYALGITIVPISTLLQRQSPRDFLLQHTLMVKTGDLYSLEKLRLQLEKSGYRYVDQVFGPGEYASRGSILDLFPMGSKDPYRIDFFDDEIDTIRTFDPENQRSIEDISEIRLLPAHEFPTSETWPAGIEYWQPLFFTLFDYVADEAQSNLRKFTE-AFKVVFSVESEGRREALSELLRGLILGSAEHGFIHEEIALICESDLLGDSDTVIRHLAELKPGQPVVHIDHGIGRYIGLQTLEA-GMKTEYVTLEYQNDAKLYVPVASLNLIGRYSGGAEDSAPLHKLGGEAWQKARKRAAEKVRDVAAELLDVYAKRELKPGYKFVLDRGQYATFKSGFPFEETDDQAMAINAVMSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVCTDNSKQVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKSIMQDVADGKVDILVGTHKLLSSDLQFKDLGLLVVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAIKTFVRESDDAIVREAVLREIMRGGQVYFLHNQVDTIEKTAESLQKLIPEARVTVAHGQMRERELERIMNDFYHQRFNLLVCTTIIETGIDVPTANTILMDRADNLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAMTKDAVKRLDAIASLEDLGAGFTLATHDLEIRGAGELLGDEQSGQIQSVGFTLYMEMLEQAVEALKEGEQTEIEMRLPALLPDDYIPDINTRLSTYKRIASVSDTDELAELKVELIDRFGLLPDATKNLLSVSELKLAAASIKAKKIEAHDKGGFLEFYP
>GAMMA2_P640907019 YP_001444725 VIBHAR_01528 transcription-repair coupling factor (mfd) [Vibrio harveyi ATCC BAA-1116]
NLPGAALAMAIAELAKHSLLVVPDPQIALKLQAEIEQFT-DQPVSLFPDWETLPYDNFSPHQEIISDRIARLYQLGVTIVPVSTVLQRQSPRDFLLQHTLMVKTGDQFSLDKLRVQLENSGYRHVDQVFGPGEYASRGSILDLFPMGSSDPYRIDFFDDEIDTIRTFDPENQRSIEDIQQIQLLPAHEFPTTKAWPAGIEYWQPLFFTLFDYLPEDSQARLRQFSE-QFKIIFSVESEGRREALTELLQGLILGAAEHGFIHEDFALICESDLLGDSDTVIRHLAELKPGQPVVHIDHGIGRYIGLQTLEA-GMKTEYVTLEYQNDAKLYVPVSSLNLISRYSGGAEESAPLHKLGGEAWAKARRKAAEKVRDVAAELLDVYAKRELKPGYKFELDRGQYATFKATFPFEETDDQSTAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNSKQVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKVILQDVADGKVDIVVGTHKLLSSDIKFKDLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAIKTFVRQREDSVVREAALREIMRGGQVYFLHNQVETIEKTAEDLQKLIPEARVTVAHGQMRERELERIMNDFYHQRFNLLVCTTIIETGIDVPTANTIIMDRADNLGLAQLHQLRGRVGRSHHQAYAYLLTPHPKAITKDAIKRLDAIASLEDLGAGFTLATHDLEIRGAGELLGDEQSGQIQSVGFTLYMEMLEQAVEALKEGEQTEIEMRIPALLPDDYIPDVNTRLSMYKRIASVTDNEGLSELKVELIDRFGILPDATKNLLSVSELKIGAGSLKAKKIEAHDKGGFIEFYP
>GAMMA2_P637397951 NP_797354 VP0975 transcription-repair coupling factor [Vibrio parahaemolyticus RIMD 2210633]
NLPGAALPLAIAELAKHSLLVVPDPQIALKLQAEIEQFT-DQPVSLFPDWETLPYDNFSPHQEIISDRIARLYQLGVTIVPVSTVLQRQSPRDFLLQHTLMVKTGDNFSLENLRVQLENSGYRHVDQVFGPGEYASRGSILDLFPMGSADPYRIDFFDDEIDTIRTFDPENQRSIEDIQQIQLLPAHEFPTTKEWPAGIEYWQPLFFTLFDYLPEDSQSRLRQFSE-QFKIIFSVESEGRREALTELLQGLILGSAEHGFIHDEFALICESDLLGDSDTVIRHLAELKPGQPVVHIDHGIGRYIGLQTLEA-GMKTEYVTLEYQNDAKLYVPVSSLNLISRYSGGAEETAPLHKLGGEAWSKARRKAAEKVRDVAAELLDVYAKRELKPGFKFALDRGQYATFKATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVATDNSKQVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKVILQDVADGKVDIVVGTHKLLSSDIKFKDLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAIKTFVREREESVVREAVLREIMRGGQVYFLHNQVETIEKTAEDLQKLIPEARITVAHGQMRERELERIMNDFYHQRFNVLVCTTIIETGIDVPTANTIIMDRADNLGLAQLHQLRGRVGRSHHQAYAYLLTPHPKAMTKDAIKRLDAIASLEDLGAGFTLATHDLEIRGAGELLGDEQSGQIQSVGFTLYMEMLEQAVEALKEGEQTEVELRIPALLPDDYIPDVNTRLSMYKRIASVSDSDELSELKVELIDRFGLLPDAAKNLLAVSELKFAAGSIKAKKIEAHDKGGFIEFYP
>GAMMA2_P637738115 YP_343644 Noc_1642 Transcription-repair coupling factor [Nitrosococcus oceani ATCC 19707]
QLYGSSFGLVLAASAYPILVITPDTITANRLEDELRFY-NGQEILHFPDWETLPYDTFSPHQDILSERLATLYQLGILIVPVSTLMQRLAPQEYLETHSLLVATGDHLHLENWRKQLEKGGYRCVSQVMEHGEFAIRGSLIDLFPMGSTLPYRIDLFDNEVDSLRSFDPETQRSLQSVAQIQLLPAREFPLVEEPFPGIEYYLSLFFTLFDYLPNNTLKTLNQFKS-TGRVLFAAETAGRRETLRDLFKDITVAPLQHGLLLS-TAVVAESQLFGQADAVVRDLVELSIGAPVVHEEHGVGRYLGLQTLEV-GVRTEFMALEYAGGDKLYVPVSSLHLINRYTGATPEAAPLHKLGSNHWERAKRKARERVRDVAAELLAIYAQRAARKKLPLPTPDSHYTAFARAFPFEETPDQADAIQAVIADLTSDQPMDRLVCGDVGFGKTEVAMRATFIVSQAGKQVAVLVPTTLLAQQHYQSFKDRFADWPARVEVISRFRSRKEQEAVISGIADGRADIVIGTHKLLQENIRFKNLGLVIIDEEHRFGVRQKERMKALRTEVDILTLTATPIPRTLHMSLSNLRDLSIIATPPARRLAIKTFVRQWNDNLLREALLREIKRGGQVYFLHNEVESINKMAQRVQTLFPEAKVGIAHGQMRERELEQVMLNFYHRRFNVLICTTIIETGIDIPSANTIIIHRADKLGLAQLYQLRGRVGRSHHRAYAYLIVPPRSVMTADAIKRLDAIESLEELGAGFTLASHDMEIRGAGELLGKDQSGQMQEIGFDLYHDLLERAVNSLKSGQGSEVDLHAPALIPEDYLPDVHTRLVLYKRIATAKNHQALTELQVEMIDRFGLLPEATKTLFATHELRLKANEIGIRKIEAGAHGGRIHFQS
>GAMMA2_P643616248 YP_002513430 Tgr7_1358 transcription-repair coupling factor [Thioalkalivibrio sp. HL-EbGR7]
RLYGAARGLAMARALALGVVITPDTREAETLARELEFF-GDD-VLTLPDWETLPYDLFSPHEDIISQRLETLYRLGILVVPVNTLMQRIAPRAWLQGRVLMLANGDRLDRDALRRNLEQAGYHCVSQVMEHGEFAVRGSLIDLFPMGSLEPYRVDLLDDEIESIRSFDPESQRSLDSVNAVRLLPAHEFPMDEAAPAGIEYYLPLFFTLFDYLPGNVRASLKTFDG-DGRVLIAAESAGRREFLVDSLRPITVAPVEDGMRMA-LAVITEPALFGEADAVISNLTDLHPGAPVVHEEHGVGRYLGLQKLAV-GQETEFLALEYAGGDKLYVPVSSLHLVSRYTGADTEHAPLHKLGGEQWAKIRRKAAEKARDVAAELLEIYARRAARQGQSFDVQATGYAAFADSFPFEETPDQARAIEAVLEDMASPRPMDRVVCGDVGFGKTEVAMRAAFVAASSGQQVAVLVPTTLLAQQHYQNFSDRFADWPIRIESLSRFRSAKDTKAVLEGLADGRVDIVIGTHKLIQGDVKFKRLGLVIIDEEHRFGVRHKERLKALRAEVDMLTLTATPIPRTLNMALSGLRDLSIIATPPMERHAIKTFISQWNDALIQEAITREIRRGGQVYFLHNAVESIERKAREIAELVPGADIGIAHGQMRESELEKVMLDFYHRRHNVLVCTTIVESGIDVPTANTIIIDRADKLGLSQLHQLRGRVGRSHHRAYAYLITPHPSAMTPDAVKRLEAIESLEDLGVGFTLASHDLEIRGAGELLGEGQSGQTQEIGFTLYNELLERAVKAMKKGEVTEVDLGVPALLPDDYVPDVHTRLILYKRIASCQSEAALRELQVEMIDRFGLLPAQAKNLMAVTELRLSLEPLGVRKLEVGPQGGRFSFQA
>GAMMA2_P638126556 YP_742634 Mlg_1800 transcription-repair coupling factor [Alkalilimnicola ehrlichei MLHE-1]
GLHGATGALALAQAARLVVAVTDSPQQAARLDTELRFFLRETPVFSFPDWETLPYDVFSPHQDIISERLAALYRLGVLIVPVNTLMQRLAPVSWLEGQGLMLGVGDRLDLDAMRERLEQAGYRCVSEVGEHGEFAVRGALLDLFPMGATQPVRIDLFDDEVETLRHFDPDTQRTTEKIDRVELLPAREFPTDEALPAGIEYYLPLFFTLFDYLPKGALERLTSYLS-DYRVLFIAETTGHREALLERLQKVAVAPVEHGAQVNQMALITEDAIYGDPETIIRDLTDLAIGAPVVHEDHGVGRYLGLQTLEAGGLTTEFLTLEYAKGDKLYVPVASLHLISRYTGAEGDAVPVHQLGSDKWEKAKKRAAKRARDAAAELLDIYARRAAREGHAYEWRDEDYQAFADAFPFEETPDQESAIAAVEADMRSSRPMDRVVCGDVGFGKTEVAMRAAFMGIQDGRQVAVMVPTTLLAQQHFQNFRDRFSDWPVRVEVLSRFRSTKDTNAVLRDLADGKVDIVIGTHKLLQDSVKYKDLGLVIIDEEHRFGVRQKEKLKKLRAEVDILTLTATPIPRTLNMSLAGIRDLSIIATPPARRLAVKTFVNQWDPAIIQEACQRELKRGGQIYFLHNDLDSIDRIARELEELVPDARVDVAHGQMPERDLERVMLDFYHQRFNILVCSTIIESGIDVPTANTILINRADKLGLAQLHQLRGRVGRSHHRAYAYLIAPPEKAMTADAKKRLEAISNLEDLGVGFALASHDLEIRGAGELLGEEQSGQISEVGFNLYTELLDRAVKALQSGRGAEVDLRIPALMPEDYLPDVHTRLVMYKRIANARTEAELDELQVEMIDRFGLLPDATRNLFRVTALKLRADALGIEKVEGLASGITLHFGS
>GAMMA2_P639855730 YP_001002834 Hhal_1257 transcription-repair coupling factor [Halorhodospira halophila SL1]
GLLGAAQPLAIAEAARPVIAVTGTPQQAAALQEAVGFFLP---VLGFPDWETLPYDVFSPHQDIISERLLGLYRLGVLVVPAATLMHRLPPRGWLEGRSLMLHPGDRLEIEPMRRRLEAAGYRCVPEVGEHGEFAVRGALLDLFPMGGETPYRIDLFDDEVESLRRFDPETQRTTDQVDAIELLPAREFPTDEGIPGGIEYYLPLFFTLFDYLPEGTLERLEQFHA-GYRILFTAESAGRRQGLQERLTRITVAPLETGARIDGIAIIPESALYGEPAAVIRDLSDLHEGAPVVHEDHGVGRYVGLQSLSV-GVTTEFLTLEYAGGDKLYVPVSALDRISRYTGADADEAPQHRLGSDQWDKARRHAAKRARDVAAELLDLYARRQARAGDACLFDDEAYEAFASAFPFEETPDQQAAIQAVLDDLRSDQPMDRVVCGDVGFGKTEVAMRAAFAGVQAGRQVAMLVPTTLLAQQHYQNFADRFADWPVRIESLSRFTGKKGNEKTLARIASGEADVVIGTHKLLGSEVQFKNLGLVIIDEEQRFGVRQKERLKRLRAEVDVLTLTATPIPRTLNMSMAGIRDLSVIATPPERRLAVKTFVQEWSDGLIREACQRELQRGGQVYFLYNDVKSIERTANQLRDLMPEARIGVAHGQMRERELEQVMLDFYHQRFDILVCTTIIESGIDIPTANTIIIHRADRFGLAQLHQLRGRVGRSHHRAYAYLLAPPPNAMTADALKRLEAISQLEDLGVGFALASHDLEIRGAGELLGDEQSGQIQEVGFTLYSQLLERAVKDLKAGTGVEVDLRLSALLPADYLPDVHTRLVQYKRISSARSDAELEELQIEMIDRFGLLPDAARNLFRTASLKLRAEALGIRKVEAGPSGGTIHFGP
>GAMMA2_P640804050 YP_001340570 Mmwyl1_1709 transcription-repair coupling factor [Marinomonas sp. MWYL1]
GLDGSRKALQLLAIASPTLYMANTVAELNELEDEIQFLNE---ILRFSDWETLPYDAFSPHQDIISQRLETLAKLPIVLTTVASCLTRLCPTQHLDAQRFHLEEGQELPLEQLSRKLSNAGYLNVENVHEHGEYAIRGALMDVFPMGAENPIRIDWFDNEIESIRWFDSETQRSISKVTEIKMLPAKEFPTTPQIPAGIEYYLPLFFSVFDYLPSDTLGKLQNFLATSARVLIVAESAGRREALLELLKKITEGNIGRGFIINNLALIPESEILGEEDAIIRNLTELRLNAPVVHIDHGVGRYLGLTNLEIDGQETELLTLGYANDAKLYVPVSSLQLISRYTGADEDTAPLHKLGTDKWSAAKQKAAEKARDTAAELLEIYAKREARVGHAFAKPDDQYELFSAGFPFEETPDQQMAIDAVMADMSAKKPMDRLVCGDVGFGKTEVAMRAAFLAVQDGKQVAVLVPTTLLAQQHYENFCDRFADWPVEIELLSRFRSGKQSNTSIDRLESGKADIVVGTHKLIQSDIKFANLGLVIIDEEHRFGVKQKEQFKALRAEVDILTLTATPIPRTLNMSLSGIRDLSIIATPPAKRLSVKTFVKQKDDHQTKEAILRELHRGGQVYYLHNEVQTIQKTAEELEELIPEARVIVGHGQMRERELEQVMSDFYHKRANVLVCSTIIETGIDIPNANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPNDRKVTGDAEKRLEAITLADTLGAGFTLATHDLEIRGTGELLGDGQSGHIEHVGFSLFMDMLDRAVKSLKNGAQTEVNLRVPALIPEDYLGDVHSRLILYKRIASAKNSEELKDLQVEMIDRFGLLPDATKNLFRQTELKLKAESLGINKIEANAKEGKIFFNS
>GAMMA2_P638079121 YP_692748 ABO_1028 transcription-repair coupling factor [Alcanivorax borkumensis SK2]
GLNAGSMAAVLAELARLLVVLAPNSSRAQQLTDSLSFY-TG-SVMLFPDWETLPYDLFSPHQDIISDRIQVLHQLGILVVPVNTLMQRLAPPIHITGNSFLLKVGDRFDMEATRSRLVASGYRQRDNVYEHGEFAVRGAIMDIFPMGAEQPFRIELFDDEIESLRLFEAESQRSTGKVDNITLLPAAEFPLSAEAAPGLEYYLPLFYTLFDYLPDDVRALLHTFDA-PDHILICAETAGRREALLELMQKLTQGELDAGFYAP-LLVVTENDLYGEAEQAFRSLGEMTVGSPVVHLEHGVGRYLGLTHMEV-HQQHEFLLLEYAGGDKLYVPVSSLHLISRYGGGD--TAPLNRLGTEQWTKARQKAAEKIHDVAAELLNTYARREAREGRQFELDLNDYDRFSASFPFEETPDQQAAIASVVADMQSSQPMDRLVCGDVGFGKTEVAMRAAFVAVENQTQVAVLVPTTLLAQQHYESFTDRFADWPVNIEVLSRFRSAKEKTQVLQRLKEGKVDILVGTHQLLQETVSFDNLGLIIVDEEHRFGVRHKERLKQMRAECDILTLTATPIPRTLNMAMSGMRDISIIATPPQKRLSVKTFVQQHNDTVIKEALLRELLRGGQVYYLHNDIDTMEKTAADIRKLVPDARVGIAHGQMRERELEAVMSDFYHRRFNVLVSTTIIETGIDVPSANTIIIDRADKLGLAQLHQLRGRVGRSHHQAYAYLITPSPKVMTKDAIKRLEAIEQATDLGAGFMLASQDMEIRGAGELLGEEQHGNIETIGFSLYMEMLEQAVDALKRGGGPELNLRIPALIPEDYLPDVFGRLTLYKRIAGCKTRAGLKELKVEMIDRFGLLPEPVKNLFAVTELRQQADRLGIIRLDAHATGGKLEFGE
>GAMMA2_P637966756 YP_573619 Csal_1567 transcription-repair coupling factor [Chromohalobacter salexigens DSM 3043]
RPHAAASALSLARLA-PLMVVAPNTASAQRLESALQFFA-DHPILSFPDWETLPYDSFSPHQDIVSTRLKTLRQLGIVVVPINTLMQRLSPTDYIAGRVLTLRTGMQLDREGFRDRLSRAGYRAVETVYEPGEHALRGALIDLYPMGSDHPLRIDLFDDEIDTLRHFDPDTQRSLDKIERIELLPAHEYSLSRSPSPGLEQYLPLFFTLFEHLADNTRAKLESFLAAHDRILLVAESSGRREALEETLAPICEGSLDEGLWLEDTCVITETELYGDNELAVRHLAELRPGAPVVHQSHGVGRYQGLETLEAGGQAAEFLALEYAGGAKLYVPVDSLHLISRYAGATDELAPLHKLGSETWDKAKRKAAEKIRDTAAELLDTYARREAREGFACAPPDEDYARFAASFPFEETPDQHAAIEAVIGDMTAARPMDRVVCGDVGFGKTEVAMRAAFLAVESGRQVVVLVPTTLLAQQHYDNFRDRFADTAVQIELISRFTAGKGQQASLERITEGRADIVIGTHKLLSKSMSLPNMGLLIIDEEHRFGVSQKEKLKGLRAEIDILTLTATPIPRTLNMAMSGIRDLSIIATPPARRLSVKTFVQQRNEGVLKEALLREILRGGQVYFLHNEVKTIDATAAKITELVPDARVGIAHGQLPERELERVMSDFYHKRFNVLVCSTIIETGIDVPSANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAMTRDALKRLEAIGQAEDLGAGFTLASHDMEIRGAGELLGDEQSGQMETIGYSLYMQMLDRAVKAIKSGEGVEVSLNLPALIPDDYLPDVQQRLIMYKRIANAESEGELKELQVEMIDRFGLLPAPLKTLFRQTRLRQRAERLGITRLEAGAERGRMTFGT
>GAMMA2_P637920879 YP_527268 Sde_1796 transcription-repair coupling protein Mfd [Saccharophagus degradans 2-40]
GVSGLARVFACAEAAATTVIIVQSMTEADRFARDLMLLKTPE-VLQFADWETLPYDNFSPHQDIISDRMRCLYQLAIVVVAASTLMQRLAPANYIIANSLVVEKNETINRDNLLTSLINAGYQRVDTVFNHGEFAIRGALLDIFPMGSSAAYRIELFDDEVDSIRTFDPETQRTVDQVSKIELLPGKECQLDAESPAGIEYYLPLFFSLFDYLHENTLYKLEEFIYYDGRILFCAESNGRRETLKEHFKKICVADFQEGLHLPNICIIAESQLFGQNENIVKNLTELKIGAPVVHIEHGVGRYLGLQTIEFDGQKDEFLVLEYANEAKLYVPVANLHFISRYSGAEDSSAPLNRLGSDQWQKAKRKAAEKLRDVAAELLEIYAKRQAREGFQYTYPKDAYEIFAESFPFEETVDQQQAIDAVRQDMISAQPMDRLVCGDVGFGKTEVAMRAAFIAVQNSKQVAVLVPTTLLAQQHYENFKDRFADWPVNVEVISRFKSSKDISEIQKKLEAGKVDILIGTHKLIQGELIFPNLGLLIIDEEHRFGVRQKEALKALRTEVDILTLTATPIPRTLNMAMSGIRDLSIIATPPAKRLSVKTFVRQSDNAVIKEAILREIMRGGQLYYLHNEVSTIEKTAADLQELVPEARIRVAHGQMRERELEAAMSDFYHKRHNILVCTTIIETGIDIPSANTIIIDRADKFGLAQLHQLRGRVGRSHHQAYAYLLTPHKKAMTADAVKRLEAIAEAQDLGAGFTLASHDLEIRGAGELLGDEQSGQMQAIGFSLYMEMLDKAVEALKSGNNVEFNLRIPALIPDDYLPDVHTRVILYKRMASVKNENELNDLQVEMIDRFGLLPDPIKNLVRQTRLRLTAEQLGVCKVEANNTGGRIEFTT
>GAMMA2_P639811904 YP_959201 Maqu_1933 transcription-repair coupling factor [Marinobacter aquaeolei VT8]
QLNGCADALAICESARLTLVITQSTSEAIQLEQSIRFFGESDELLSLPDWETLPYDLFSPHQDITSRRIRSLHRLGILVVPARTLMHRLAPPSYLQGNTLLLEVGQTLDIDSWRMQLEAAGYHHTDNVYEHGEYAVRGAILDIYPMGSNLPYRIDLFDDEIETLRTFDPETQRSIDKTERIELLPANEFPWHKETPPGIEYYLPLFFTLFDYLPGNTLGRLKRFIQFHGRILICAESSGRREALIDNLADITIAPLEQGMVLPDLALITETALFGEDDAGYRDLSELRIGAPVVHIDHGVGRYKGLETLTA-GQSDEFLTLEYAGGSKLYVPVSSLHLISRYAGTDEEHAPLHKLGTERWSNAKQKALEKIRDTAAELLDVYARREARKGFQFEDPKEAYRAFAAGFPFEETPDQQVAIESVFEDMTSERPMDRLVCGDVGFGKTEVAMRAAFLATWSGKQVAVLVPTTLLAQQHYESFRDRFSDTPVTVELLSRFRSGSQTSKAITAIEEGKADIVIGTHKLLQGDINFKNLGLVIIDEEHRFGVQQKEKLKSLRAEVDMLTLTATPIPRTLNMAMGHLRDLSIIATPPARRLSVKTFVRQRDDAMVKEAILREILRGGQVYFLHNDVATIEKTAEDLRKLIPEARVGVAHGQMRERQLEQIMSDFYHKRFNVLVCTTIVETGIDIPSANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAISADARKRLDAISESQDLGAGFMLATHDLEIRGAGELLGEEQSGQIESIGFTLYMQLLDEAVKAIRDGHGTEMNLRIPALIPDDYLPDVHNRLMLYKRIASVKDREALKELQVEMIDRFGLLPPPAKNLMRQAQLRLQAETLGIVKVDAGKEWVRLEFGA
>GAMMA2_P642703096 YP_001982241 CJA_1764 transcription-repair coupling protein Mfd [Cellvibrio japonicus Ueda107]
NLHGSAQALAIVNAARLSLVIAPDTSSAIRLQTELSFF-GGDEVLHLADWETLPYDSISPHQDIISERLRTLYRLGILVVPITTLLQRLMPRSYLLGNSLMLAVGEQLDIDQLRHNLERAGYHAVDTVYEHGEFAVRGALLDIFPMGSDLPYRIDLFDDEVETLRTFDPETQMTIDKVEKIQLLPAKEFPLNKPSPPGVEYYLPLFFNLFDYLPQNTLAAIEAFME-HGRVLFCAESAGRRETLLELLGRITIAPLEQGLQQQ-TVLIAESQLFGESELVVKNLTELKIGAPVVHIDHGVGRYRGLETITV-DQTNEFLTLEYADDAKLYVPVTSLHLISRYSGAEDDLAPLHKLGSESWQKAKRKAAEQIRDTAAELLEVYARRAARKGFAFPDPQTAYAAFSASFPFEETPDQQRAIEAVVKDMLSPKPMDRLVCGDVGFGKTEVAMRAAFVASHAGKQVAILAPTTLLAQQHYESLKDRFAEWPITIEVLSRFRTTKEVNQVLERLAEGKVDIIVGTHKLLQPDIKFKNLGLLIIDEEHRFGVRQKEQIKALRAEIDILTLTATPIPRTLNMSMAGIRDLSIIATPPARRLSVKTFVRTYDEAVIKEAILREILRGGQVYYLHNEVDTIEKVARELQELIPEARIAVGHGQMRERDLERVMSDFYHKRFNIMVCTTIIETGIDIPSANTIIINRADKFGLAQLHQLRGRVGRSHHQAYAYLLTPERRAMTDDAVKRLEAISAAEDLGAGFTLATYDMEIRGAGELLGEEQSGQIQTIGFSLYMEMLDRAVKAIRQGESIDINLRIPALIPSDYLPDVHLRLVMYKRLANAENAESLRDLQVEMIDRFGLLPDAVKNLFRVTQIKITAEQLGITKIEANSRGGKIEFSG
>GAMMA2_P643804355 YP_002798648 Avin_14570 transcription-repair coupling factor [Azotobacter vinelandii DJ, ATCC BAA-1303]
NLPGTALPLAIAEAASFTLLLTADSLSAERLEQDLRFFAPELPVLQFPDWETLPYDLFSPHQDIVSQRIASLYRLGVLVVPITTALHRLAPKPFLLGSSLVLDVGQRLDVEQMRQRLEAAGYRCVETVYEHGEFAVRGALIDLFPMGSERPYRIDLFDDEIETLRTFDPETQRSIDKVESVRLLPAREFPLRKETPAGIEYYLPLFFTLFDYLPSTTQAALAGFLD-GFRVLFTAESAGRREVLLELLARIAIAPLDEGLLLDELALIAESQLFGQGDNVIKHLTELREGAPVVHIDHGIGRYRGLVTLEVEGQAAEFLMLEYAEEAKLYVPVANLHLIARYTGSDDALAPLHRLGSEQWQRAKRKAAEQVRDVAAELLDIYARRAARAGFAFKDPATDYETFSASFPFEETPDQQAAIDAVRTDMLAPRPMDRLICGDVGFGKTEVAMRAAFIAVHSGRQVAVLVPTTLLAQQHYNSFRDRFADWPVKVEVMSRFKSAKEVEGAIAALAEGKIDIVIGTHKLLQDDVSFKNLGLAIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVAGMRDLSIIATPPARRLSVRTFVMEQQNTLIREALLRELLRGGQVYYLHNEVKTIEKCARELAELVPEARIAIGHGQMRERELEQVMGDFYHKRFNVLVASTIIETGIDVPSANTIVIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRKQMTEDAQKRLEAIAGAQDLGAGFVLATHDLEIRGAGELLGEGQSGQIQAVGFTLYMEMLERAVKAIRKGGGPDINLRVPALIPEDYLPDVHARLILYKRIASASAEEELNELQVEMIDRFGLLPEPTKHLMRLTRLKLQAERLGIAKIDAGPQGGRIEFAA
>GAMMA2_P640502821 YP_001187089 Pmen_1593 transcription-repair coupling factor [Pseudomonas mendocina ymp]
NLPGAALSLAIAEAASFTLVLTEGSQSAERLQEELAFFAPDLPVLHFPDWETLPYDVFSPHQDIISQRIATLYRLGILVVPIATALHRLAPKRFLLGSSLVLDVGQKLDVEQMRTRLEAAGYRCVDTVYEHGEFAVRGALIDLFPMGSEVPYRIDLFDDEIETLRTFDPENQRSVDKVESIRLLPAREFPLEKKTPAGIEYYLPLFFTLFDYLPGDTQAALRRFIE-EYRVLFCAESAGRREVLLELLARICIAPLDEGLLLDDLALIAESPLFGQGDNVIKNLTELREGAPVVHIDHGVGRYLGLVTMEFDGQAAEFLALQYADEAKLYVPVASLHLIARYSGSDDALAPLHRLGSETWQKAKRKAAEQVRDVAAELLDIYARRAAREGFAFQDPALDYATFSAGFPFEETPDQQAAIDAVRADMLAGKPMDRLVCGDVGFGKTEVAMRAAFIAVHSGKQVAVLVPTTLLAQQHYNSFRDRFADWPVKVEVMSRFKSAKEVEGAVQQLAEGKVDIVIGTHKLLQDDVKFHNLGLVIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVAGMRDLSIIATPPARRLSVRTFVMEENKPTIKEALLRELLRGGQVYYLHNDVKTIDKCASELAELVPEARIGVGHGQMRERELEQVMSDFYHKRFNVLVASTIIETGIDVPSANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRKSMTDDAQKRLEAIAGAQDLGAGFILATHDLEIRGAGELLGDGQSGQIQAVGFTLYMEMLERAVKAIQKGGGPEINLRVPALIPEDYLPDVHARLILYKRIASATDEDGLKELQVEMIDRFGLLPEPTKHLMRLTLLKLQADKLGITKVDAGPQGGRIEFAA
>GAMMA2_P640488601 YP_001173149 PST_2657 transcription-repair coupling protein Mfd [Pseudomonas stutzeri A1501]
NLPGAALSLAIAEAASFTLLLTADSQSAERLQEELAFFAPELPVLHFPDWETLPYDLFSPHQDIVSQRIATLYQLGVLVVPITTALHRLAPKRFLLGSSLVLDVEQKLDVEQMRLRLEAAGYRCVDTVYEHGEFAVRGALIDLFPMGSALPYRIDLFDDEIETLRTFDPENQRSIDKVESIRLLPAREFPLKKETPAGIEYYLPLFYTLFDYLPEDSQGKLRQFLD-GFRVLFTAESAGRREVLLELLARIAIAPLDEGLLLDEVALVAESPLFGQGDNVIKNLTELREGAPVVHIDHGVGRYQGLVTLEIEGQAQEFLLLQYADEAKLYVPVASLHLIARYTGSDDALAPLHKLGSETWQKAKRKAAEQVRDVAAELLDIYARRAARQGYAFKDPQVDYETFAAGFPFEETPDQQAAIDAVREDLLSAKPMDRLVCGDVGFGKTEVAMRAAFIAVHGGKQVAVLVPTTLLAQQHYNSFRDRFADWPVRVEVMSRFKSAKEVQNAITELADGKIDILIGTHKLLQDDVKFSNLGLVIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMSIAGMRDLSIIATPPARRLSVRTFVMEANNPTIKEALLRELLRGGQVYYLHNDVKTIEKCAADLQALVPEARIAIGHGQMRERDLEQVMSDFYHKRFNVLVASTIIETGIDVPSANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRKAMTDDAQKRLEAIANAQDLGAGFVLATHDLEIRGAGELLGEGQSGQIQAVGFTLYMEMLERAVKAIRKGGGPEINLRLPALIPEDYLPDVHARLILYKRIANAADEDGLKELQVEMIDRFGLLPEPTKNLVRLTLLKLQAEKLGITKIDAGPQGGRIEFSA
>GAMMA2_P640811210 YP_001347529 PSPA7_2157 transcription-repair coupling factor [Pseudomonas aeruginosa PA7]
NLPGAALSLAVAEAASFTLLLTADSQNAERLEQELRFFAPDLPVLHFPDWETLPYDVFSPHQDIISQRIAALYQLGVLVVPISTALHRLAPTRFLLGSSLVLDIGQKLDVERMRLRLEGAGYRCVDTVYEHGEFAVRGALIDLFPMGSELPFRIDLFDDEIETLRTFDPETQRSIDKVESIRLLPAREFPLNKETPSGIEYYLPLFFTLFDYLPQDTQAALRRFIE-EFRVLFCAETAGRREVLLELLARISIAPLDEGLLLPALALVAESPLFGQGDAVIKNLTELREGAPVVHIDHGVGRYLGLITLEV-DQQAEFLMLQYAEDAKLYVPVANLHLIARYTGADDALAPLHRLGSETWQKAKRKAAEQVRDVAAELLDIYARRAAREGFAFKDPQADYATFSAGFPFEETPDQQSAIEAVVADMLAPRPMDRLVCGDVGFGKTEVAMRAAFVAVHSGKQVAVLVPTTLLAQQHYNSFRDRFADWPVNVEVMSRFKSAKEVESAARQLAEGKIDILIGTHKLLQEDVRFANLGLVIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQQNAVIKEALLRELLRGGQVYYLHNEVKTIEKCARDLAELVPEARIGIGHGQMHERELEQVMSDFYHKRFNVLVASTIIETGIDVPSANTILIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRRQMTPDAEKRLEAIANAQDLGAGFVLATHDLEIRGAGELLGDGQSGQIQAVGFTLYMEMLERAVKAIRKGGGPEVNLRVPALIPEDYLPDVHARLILYKRIANAADEDGLRELQVEMIDRFGLLPDPAKNLMRLTLLKLQAEKLGILKVDAGPQGGRIEFAA
>GAMMA2_P637053410 NP_251692 PA3002 transcription-repair coupling protein Mfd [Pseudomonas aeruginosa PAO1]
NLPGAALSLAVAEAASFTLLLTADSQNAERLEQELRFFAPDLPVLHFPDWETLPYDVFSPHQDIISQRIAALYQLGVLVVPISTALHRLAPTRFLLGSSLVLDVGQKLDVERMRLRLEGAGYRCVDTVYEHGEFAVRGALIDLFPMGSELPFRIDLFDDEIETLRTFDPETQRSIDKVESIRLLPAREFPLNKETPSGIEYYLPLFFTLFDYLPQDTQAALRRFIE-EFRVLFCAESAGRREVLLELLARISIAPLDEGLLLPALALVAESPLFGQGDAVIKNLTELREGAPVVHIDHGVGRYLGLITLEV-DQQAEFLMLQYAEDAKLYVPVANLHLIARYTGADDALAPLHRLGSETWQKAKRKAAEQVRDVAAELLDIYARRAAREGFAFKDPQADYATFSAGFPFEETPDQQSAIEAVVADMLAPRPMDRLVCGDVGFGKTEVAMRAAFVAVHSGKQVAVLVPTTLLAQQHYNSFRDRFADWPVSVEVMSRFKSAKEVENAARLLAEGKIDILIGTHKLLQEDVKFANLGLVVIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQQNAVIKEALLRELLRGGQVYYLHNEVKTIEKCARDLAELVPEARIGIGHGQMHERELEQVMSDFYHKRFNVLVASTIIETGIDVPSANTILIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRRQMTPDAEKRLEAIANAQDLGAGFVLATHDLEIRGAGELLGDGQSGQIQAVGFTLYMEMLERAVKAIRKGGGPEVNLRVPALIPEDYLPDVHARLILYKRIANAPDEEGLRELQVEMIDRFGLLPDPAKNLMRLTLLKLQAEKLGILKVDAGPQGGRIEFAA
>GAMMA2_P640588049 YP_001268902 Pput_3594 transcription-repair coupling factor [Pseudomonas putida F1]
NLPGAALSLAIAEAASFTLLLTADSQAADRLEQELRFFAPDLPVLPFPDWETLPYDLFSPHQDIISQRIASLYRLGILVVPITTALHRLAPTRFLLGSSLVLDVGQTIDVEQMRLRLEASGYRCVDTVYEHGEFAVRGALIDLFPMGSKLPYRIDLFDNEIETLRTFDPETQRSIDKVDSVRLLPAREFPMQKEIPAGIEYYLPLFFTLFDYLPTDTQAELANFLD-QFRVLFTAESAGRREVLLELLERITIAPLDDGLLLPGLALIAESPLFGQNDAVIKNLTELREGAPVVHIDHGVGRYLGLATLEIDGQAAEFLTLEYAENAKLYVPVANLHLIARYTGSDDALAPLHRLGSEAWQKAKRKAAEQVRDVAAELLDIYARRAARKGYAFADPSADYATFSAGFPFEETPDQQAAIEAVRADMLAPKPMDRLVCGDVGFGKTEVAMRAAFIAVHSGRQVAVLVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSAKEVAAAAADLAEGKIDILIGTHKLLQDDVRFKDLGLAIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVAGMRDLSIIATPPARRLSVRTFVMEQNKSTVKEALLRELLRGGQVYYLHNDVKTIEKCAADLAELVPEARIGIGHGQMRERELEQVMSDFYHKRFNVLVASTIIETGIDVPSANTIVIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPTRQKVSADAEKRLEAIANTQDLGAGFVLATNDLEIRGAGELLGEGQSGQIQAVGFTLYMEMLERAVKAIRKGGGPEINLRLPALIPEDYLPDVHARLILYKRIASAADEEGLKDLQVEMIDRFGLLPEPTKNLMRLTSLKLHAEKLGIKKVDAGPNGGKLEFEA
>GAMMA2_P637145562 NP_744297 PP_2148 transcription-repair coupling factor [Pseudomonas putida KT2440]
NLPGAALSLAIAEAASFTLLLTADSQAADRLEQELRFFAPDLPVLPFPDWETLPYDLFSPHQDIISQRIASLYRLGILVVPITTALHRLAPTRFLLGSSLVLDVGQTIDVEQMRLRLEASGYRCVDTVYEHGEFAVRGALIDLFPMGSKLPYRIDLFDNEIETLRTFDPETQRSIDKVDSVRLLPAREFPMQKEIPAGIEYYLPLFFTLFDYLPTDTQAELANFLDFPGRVLFTAESAGRREVLLELLERITIAPLDDGLLLDDLALIAESPLFGQNDAVIKNLTELREGAPVVHIDHGVGRYLGLATLEIDGQAAEFLTLEYAENAKLYVPVANLHLIARYTGSDDALAPLHRLGSEAWQKAKRKAAEQVRDVAAELLDIYARRAARKGYAFADPSADYATFSAGFPFEETPDQQAAIEAVRADMLAPKPMDRLVCGDVGFGKTEVAMRAAFIAVHSGRQVAVLVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSAKEVAAAAADLAEGKIDILIGTHKLLQDDVRFKDLGLAIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVAGMRDLSIIATPPARRLSVRTFVMEQNKSTVKEALLRELLRGGQVYYLHNDVKTIEKCAADLAELVPEARIGIGHGQMRERELEQVMSDFYHKRFNVLVASTIIETGIDVPSANTIVIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPTRQKVSADAEKRLEAIANTQDLGAGFVLATNDLEIRGAGELLGEGQSGQIQAVGFTLYMEMLERAVKAIRKGGGPEINLRLPALIPEDYLPDVHARLILYKRIASAADEEGLKDLQVEMIDRFGLLPEPTKNLMRLTSLKLHAEKLGIKKVDAGPNGGKLEFEA
>GAMMA2_P638002637 YP_609222 PSEEN3715 transcription-repair coupling protein [Pseudomonas entomophila L48]
NLPGAALSLAIAEAASFTLLLTADSQAADRLEQELRFFAPELPVLPFPDWETLPYDLFSPHQDIISQRIASLYRLGILVVPVTTALHRLAPTRFLLGGSLVLDVGQKIDVEQMRTRLEASGYRCVDTVYEHGEFAVRGALIDLYPMGSKQPYRIDLFDDEIETLRTFDPETQRSIDKVDSVRLLPAREFPMQKDIPAGIEYYLPLFFTLFDYLPADTQAELANFLDFPGRVLFTAESAGRREVLLELLERITIAPLDDGLLLDDIALVAESPLFGQNDAVIKNLTELREGAPVVHIDHGVGRYLGLATLEIDGQAAEFLTLEYAEGAKLYVPVANLHLIARYTGSDDALAPLHRLGSEAWQKAKRKAAEQVRDVAAELLDIYARRAARKGYAFADPAADYATFSAGFPFEETPDQQAAIEAVRADMLAGQPMDRLVCGDVGFGKTEVAMRAAFIAVHSGRQVAVLVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSAKEVATAAAELAEGKIDILIGTHKLLQDDVRFKDLGLAIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQNKSTVKEALLRELLRGGQVYYLHNDVKTIEKCAAELAELVPEARIGIGHGQMRERELEQVMSDFYHKRFNVLIASTIIETGIDVPSANTIVIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRQQISADAEKRLEAIANTQDLGAGFVLATNDLEIRGAGELLGEGQSGQIQAVGFTLYMEMLERAVKAIRKGGGPEINLRLPALIPEDYLPDVHARLILYKRIASAADEEGLKDLQVEMIDRFGLLPEPTKNLMRLTSLKLLAEKLGIKKVDAGPNGGKLEFEA
>GAMMA2_P637487426 YP_274082 PSPPH_1851 transcription-repair coupling factor [Pseudomonas syringae pv. phaseolicola 1448A]
NLPGATLSLAIAEAASFTLLLTADSQSAERLEQELKFFAPTLPVLHFPDWETLPYDLFSPHQDIISQRIASLYRLGVLVVPITTALHRLAPTKFLLGSSLVLDVGQKLDVEAMRTRLEASGYRYVDTVYEHGEFTVRGALIDLFPMGSKLPFRIDLFDDEIETLRTFDPDTQRSIDKVESVRLLPAREFPLQKETPAGIEYYIPLFFTLFDYLPQDTQAALSNFLDFPGRVLFTAESAGRREVLLELLERITIAPLDEGLLLEQLALIAESPLFGQNDAVIKNLTELREGAPVVHIDHGVGRYLGLATLEVN-QVAEFLMLAYAEDAKLYVPVANLHLIARYTGSDDETAPLHRLGSETWQKAKRKAAEQVRDVAAELLDIYARRAAREGYAFADPKADYATFSAGFPFEETPDQQTTIDAVRADMLAPKPMDRLVCGDVGFGKTEVAMRAAFIAVHGGRQVAILVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSAKEVSAAVADLAEGKIDIVIGTHKLLQDDVKIKNLGLVIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQNKPTIKEALLRELLRGGQVYYLHNDVKTIEKCAADLAELVPEARIGIGHGQMRERELEQVMSDFYHKRFNVLIASTIIETGIDVPSANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRKQITPDAEKRLEAIANTQDLGAGFVLATNDLEIRGAGELLGDGQSGQIQAVGFTLYMEMLERAVKSIRKGGGPEINLRVPALIPEAYLPDVHTRLILYKRIANAADEEALKDLQVEMIDRFGLLPEPTKNLVRITLLKLHAEQLGIRKIDGGPQGGRIEFAA
>GAMMA2_P637393480 NP_791924 PSPTO_2101 transcription-repair coupling factor [Pseudomonas syringae pv. tomato DC3000]
NLPGAALSLAIAEAASFTLLLTADSQSAERLEQELKFFAPTLPVLHFPDWETLPYDLFSPHQDIISQRIASLYRLGVLVVPITTALHRLAPTKFLLGSSLVLDVGQKLDVNAMRTRLEASGYRYVDTVYEHGEFTVRGALIDLFPMGSKLPFRIDLFDDEIETLRTFDPDTQRSIDKVESVRLLPAREFPLQKETPAGIEYYIPLFFTLFDYLPQDTQAALAKFLDFPGRVLFTAESAGRREVLLELLERITIAPLDEGLLLDQLALVAESPLFGQNDAVIKNLTELREGAPVVHIDHGVGRYLGLATLEVN-QVAEFLMLAYAEDAKLYVPVANLHLIARYTGSDDEMAPLHRLGSETWQKAKRKAAEQVRDVAAELLDIYARRAAREGYAFADPKADYATFSAGFPFEETPDQQTTIEAVRADMLAPRPMDRLVCGDVGFGKTEVAMRAAFIAVHGGRQVAILVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSAKEVSAAVANLAEGKIDIVIGTHKLLQDDVKIKNLGLVIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQNKPTIKEALLRELLRGGQVYYLHNDVKTIEKCAADLAELVPEARIGIGHGQMRERDLEQVMSDFYHKRFNVLIASTIIETGIDVPSANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRKQITSDAEKRLEAIANTQDLGAGFVLATNDLEIRGAGELLGDGQSGQIQAVGFTLYMEMLERAVKSIRKGGGPEINLRVPALIPEAYLPDVHTRLILYKRIANAADEDALKDLQVEMIDRFGLLPEPTKNLVRITLLKLQAEQLGIKKVDGGPQGGRIEFAT
>GAMMA2_P637319293 YP_259073 PFL_1954 transcription-repair coupling factor [Pseudomonas fluorescens Pf-5]
NLPGAALSLAIAEAASFTLLLTADSQSADRLEQELSFFAPDLPVLHFPDWETLPYDLFSPHQDIISQRIASLYRLGVLVVPITTALHRLAPTQFLLGSSLVLDVGQKLDVEQMRTRLEASGYRYVDTVYEHGEFTVRGALIDLFPMGSKLPYRIDLFDDEIETLRTFDPENQRSIDKVDSVRLLPAKEFPLQKETPAGIEYYLPLFFTLFDYLPQDTQAALSGFLDFPGRVLFTAESAGRREVLLELLERITIAPLDEGLVLDDLALVAESPLFGQNDAVIKNLTELREGAPVVHIDHGVGRYLGLATLEIN-QAAEFLTLEYAEGAKLYVPVANLHLIARYTGSDDALAPLHRLGSEAWQKAKRKAAEQVRDVAAELLDIYARRAAREGYAFADPKADYATFSAGFPFEETPDQQSTIEAVREDMLSGKPMDRLVCGDVGFGKTEVAMRAAFIAVHGGKQVAILVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSTKEVNAAVADLAEGKIDIVIGTHKLLQDDVKIKNLGLVIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQNKSTVKEALLRELLRGGQVYYLHNDVKTIEKCAADLAELVPEARIGIGHGQMRERELEQVMSDFYHKRFNVLIASTIIETGIDVPSANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRQQITPDAEKRLEAIANTQDLGAGFVLATNDLEIRGAGELLGDGQSGQIQAVGFTLYMEMLERAVKAIRKGGGPEINLRLPALIPEDYLPDVHARLILYKRIASATDEDGLKDLQVEMIDRFGLLPEPTKNLIRLTLLKLQAEQLGIKKVDGGPQGGRIEFAA
>GAMMA2_P643855702 YP_002871207 PFLU1565 transcription-repair coupling factor [Pseudomonas fluorescens SBW25]
NLPGAALSLAIAEAASFTLLLTADSQSAERLEQELSFFAPDLPVLHFPDWETLPYDLFSPHQDIISQRIASLYRLGVLVVPITTALHRLAPTKFLLGSSLVLDIGQKLDVEQMRTRLEASGYRCVDTVYEHGEFAVRGALIDLFPMGSKLPYRIDLFDDEIETLRTFDPENQRSIDKVDSIKLLPAREFPLQKDTPAGIEYYLPLFFTLFDYLPQDTQEALSNFLGFPGRVLFTAESAGRREVLLELLERITIAPLDEGLLLDDLALIAESPLFGQNDAVIKNLTELREGAPVVHIDHGVGRYLGLQTLEIN-QAAEFLTMEYAEGAKLYVPVASLHLIARYTGSDDALAPLHRLGSETWQKAKRKAAEQVRDVAAELLDIYARRAAREGYAFADPKADYATFSAGFAFEETPDQQTTIEAVRADMLAPKPMDRLVCGDVGFGKTEVAMRAAFIAVHGGKQVAILVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSAKEVNAAIADLAEGKIDIVIGTHKLLSDDVKIKNLGLVIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQNKSTVKEALLRELLRGGQVYYLHNDVKTIEKCAADLAELVPEARIAIGHGQMRERDLEQVMSDFYHKRFNVLIASTIIETGIDVPSANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRQQITSDAEKRLEAIANTQDLGAGFVLATNDLEIRGAGELLGDGQSGQIQAVGFTLYMEMLERAVKAIRKGGGPEINLRLPALIPEDYLPDVHARLILYKRIASATDEEGLKDLQVEMIDRFGLLPEPTKNLVRLTLLKLQAEQLGIKKVDAGPQGGRIEFEA
>BARIO1_P642715940 YP_001994981 Ctha_0063 transcription-repair coupling factor [Chloroherpeton thalassium ATCC 35110]
GVYGSLAAILTALMFEPVLLVC-NEERVDLFENDLRQLS-AKDVCDFV---SEPSLTLA-----------TLVADKITVASTLELQKKVLPKKEALEKQVRLSENEPFGYETLIRFLQENGFDQKDFVESEGDFSVRGSVVDVFSFGAASPVRIEFFGDEPESIRFFDINSQLSKENISSVSIVSNLVAAEDAE--SECV-------SLLDYLPAN--QHVRQAVANEYDILVATKSKKELQELVEFISVILHQNLYEGFQFENTVLYTESDVFGKRKISLRELRALKVGDYIVHEDYGIGVFMGMEKTKV-GSEQECVLVEYDKGDKLFVNIQNLHLLSKYSSAEGKVPTLSKLGSNKWQANKEKIKKRLKDIARNLIAIYAKRKMTKGFACKQDSVWQREFEAAFIFDETPDQMSAIESIKADMEAVAPMDRLICGDAGFGKTEVAMRAAFKAVESGKQVAVLVPTTILAHQHFNTFKLRFQNFPMRVEVLSRFVPKKSQKAVIAEIGEGKVDIVVGTHRIVSKDVKFTDLGLLIIDEEQHFGVAAKEKLREDFPSVDTLVLSATPIPRTLQFSMMGARDLSIISTPPKNRQPVETVIHEFDAEMIKQAIGREIGRGGQVFFLHNRINSISEMYELVKKLFPRARVGVAHGQMPTKELEAVMLDFIQKELDVLVSTAIVGSGLDISNANTMIINRADMFGLSDLYQLRGRVGRSDKKAYAYLFTPPLSTLKQDALQRLAVIEAYTELGSGFSVAMRDLDIRGAGNLLGAEQSGFIFDLGFDVYQKILEEAVSELKSTKPCEVIFFFDALIPAYYVESASERFALYEKLSKANTYEALGKLAAELNDRFGKMPEECQSLFDVGVLRILGTELELQRLESETKTAVFLPEG
>BARIO1_P642684190 YP_001960096 Cphamn1_1696 transcription-repair coupling factor [Chlorobium phaeobacteroides BS1]
PAYAGIKTQMFSSCERPCSEITGISGIQGSLATLLAVQLG--PVLVLAIFDLYDNDLSEQPEQVHTASDEALGKLIVLLASFDDLLTPLHCPEEQDSMLFTLQIDKEAGYGKLKNFLLQNDYSKSEFVEEEGEYSTRGSIIDIFPFGSKAPVRIEFFGDTVTSLRSFDTGSQLS-G-ARLDRALLGGNFVADKK-SDSEKSW-----NLLDHLPAE--RELTRI--QSGHTVFVGNSKKEIEELTEFIAEL---NLHSGFVFSGFNVYTESDIFGKKGISLKDLQKLNIGDYIVHEDYGIGIFKALETIEV-GSEQESVLVEYQGGDQLYVNVQNIRLLSKYTASEGSLPALSKLGSSKWKAKKEKVKNRLKDIASKLIRLYAKRKMTTGFAFRTDSIFQKEFEASFIFDETPDQLKTIEQVKNDMQSGSPMDRLICGDAGFGKTEIAMRASFKAVESNKQVALLTPTTILAHQHAETFRRRFENVPLNIAVLSRFVTKKEQKNLIEKISRGLIDIVIGTHRLVSKDVVFQDLGLLIIDEEQHFGVSTKEKLRQSFPGVDTLTMSATPIPRTLQFSMLGARDLSIVSTPPKNRQPVETVITQFNPDTIRSAIQHEISRRGQVFFLHNRIAGLDQIRNTLQELAPEARIGIAHGQMPTSELENVMMEFISHKLDLLISTSIIGSGLDISNANTIIINRADMFGLSDLYQLRGRVGRSERKAYSYLIIPPVHTLKREAMERLAVIESFTELGSGFNIALRDLDIRGAGNLLGAEQSGAIHELGFDLYQKLLEEAVTELKTGGITDMIFYFDALIPDYYVSATQERFSFYEKISKSTTDSQIEAIEKELRDRFGPVPRDVANLIGLAKLKNLCSSIGLVKVDQQDKFTLYLPDD
>BARIO1_P642724763 YP_002015460 Paes_0766 transcription-repair coupling factor [Prosthecochloris aestuarii SK413, DSM 271]
GLQGSLSSLLVAALVEPVMVICNQD------------------IFDLYDNDTLLIDPASTAADELSAALSTLAEHALILADFDDLKIRLQNPDGASDKIFPLQNNSDAGYNKLIDFLSRNNFNRKDFVDAEGEFSTRGSIIDIFPFGAREPLRIEFFGDTITSIRSFDTNSQLSKTSVQTVEL--TGNFLLEPQ-SDEDRSW-----SIFDYLPASTIRELATKTAQDLQTVFIGSSKKEIEELAEFIAEWIAANLYSGFRFNGYDVYSESDIFGKKGISLKDLHRLNVGDHIVHEDYGIGIFKALETIQV-GSEQECVLVEYDKGDQLYVNVQNIGLLSKYSAAEGSLPSLSRLGSSKWKARKDKVKKRLRDIASELIKLYAKRKMTPGFAFGQDSIFQREFEASFIFDETPDQLKAIEEVKKDMQSPFPMDRLICGDAGFGKTEIAMRAAFKAVESSKQVAVLTPTTILAHQHMETFTRRFENFPVNIAVLSRFVSKSDQKKIVHDLSKGLIDIVIGTHRLVSKDVVFQDLGLLVIDEEQHFGVSVKEKLRQTFPSVDTLTMSATPIPRTLQFSMLGARDLSIVSTPPKNRQPVETMITTFDTDLLQSAIRTEINRKGQVFVLHNRIAGLEEMKQTLQELVPGVRMAYAHGQMPTAELENIMMDFITHELDVLISTSIIGSGLDISNANTIIINRADMFGLSDLYQLRGRVGRSDRKAYSYLITPPIQTLKQDAIQRLAVIESFTELGSGFNIAMRDLDIRGAGNLLGSEQSGAIHELGFNLYQKLLEEAVAELKTGHHCDMSFFFDALIPDYYVSSAQERFMFYEKISKALNNETLKRLEDELQDRFGALPQDVENLLGLARLQALCSSLGLAKVDQHNSATLTLPPQ
>BARIO1_P642719299 YP_001998274 Cpar_0654 transcription-repair coupling factor [Chlorobaculum parvum NCIB 8327]
GVRGSLAPAIAATLSGPVLLLCSPEAE-EVYDNDLPLL-----LENRPLHN--TVDELSPALGKLSRNEP-----VVVLASFDDLGTAVCDAEASAGRIFSLATNEDAGYDALMEFLKENGFDKRDFVENEGEFSVRGSIVDVFCYGGREPVRIEFFGDTVSSLRTFDTDSQLSSNTIESVDLFGTFS---QKE-------------GILDYLPESALGRLQQEVSDGLKPLFACASKREIEELAEFLTEWIPANLYAGFGFAGLDLFTESDIFGKRGISLKELQRLKVGDYVVHEDYGVGVFRSLETIQV-GSEQECVLVEYEGGDQLYVNVQNINLLSKYTASEGSLPNLSKLGSSKWSAKKEKVRKKLRDIAAKLIRIYAERKMTPGFAFGPDSIFQREFEASFMFEETPDQLKAIQEVKKDMQSPSPMDRLICGDAGFGKTEIAMRAAFKAVEGKKQVAILTPTTILTHQHAESFARRFANFPVNIAVLSRFVPRKEQKETIERIASGAVDIVIGTHRLVSKDVVFKDLGLLVIDEEQHFGVDTKEKLRQQFPGVDTLTMSATPIPRTMQFSMLGARDISIVSTPPKNRQPVETIISEFDAGVVQGAIKREIQREGQVFFLNNRIASLDEVERTIRELVPYARIASAHGQMPARELENIMMDFMNQELDVLIATSIIGSGLDISNANTIIINRADMFGLSDLYQLRGRVGRSERKAYCYLVTPPLHTLKREAVQRIAVIETFTELGSGINVALRDLDIRGAGNLLGAEQSGFIHEIGFDLYQKMIEETVAELKLTKPCDMIFFFDALIPDHYLTATQERFSCYDRISKAANESVIDKLEAELEDRFGPMPEEVKNLLALARLKNLGSSLGLEKIDQPATTTLFLPSD
>BARIO1_P637115591 NP_661550 CT0653 transcription-repair coupling factor [Chlorobium tepidum TLS]
SIIKRPVDLVLDSLAAALSVATTGEHRAVDICGVRGSLAARDPVVLFCNADLLGGKPFRNTADELSPALGMLSRRLVVLAAFEDLSIEVCGTESSNERLFSLAAGSDAGYDALMQFLKSNGFEKREFVENEGEFSVRGSIIDVFCYGSREPVRIEFFGDTVSSLRNFDTDSQLSTSAIESVDLFGSFTQESESK-------------GILDYLPDTAIGRLQEEAERGLKPLFACASRREIEELAEFIADWIPANLHSGFAFGELNLYTESDIFGKRGISLKELQRLKVGDYVVHEDYGIGVFRSLETIQV-GSEQECVLVEYEGGDQLYVNVQNINLLSKYTASEGSLPNLSKLGSSKWSAKKERVRKKLRDIAAKLIRVYAKRKMTPGFAFGPDSIFQREFEASFMFEETPDQLKAIQEVKKDMQSPSPMDRLICGDAGFGKTEIAMRAAFKAVENKKQVAILTPTTILTHQHGESFARRFANFPVNIAVLSRFVPRKEQKETIERIASGAMDIVIGTHRLVSKDVVFKDLGLLVIDEEQHFGVEVKEKLRHQFPGVDTLTMSATPIPRTMQFSMLGARDISIVSTPPKNRQPVETIITEFDPETVRAAIKREIQREGQVFFLHNRITSLEETALKLRELVPYARMATAHGQMPAKELENVMMDFMQQELDVLISTSIIGSGLDISNANTIIINRADMFGLSDLYQLRGRVGRSERKAYCYLITPPLHTLKREAVQRIAVIETFTELGSGINVALRDLDIRGAGNLLGAEQSGFIHEIGFDLYQKMIEETVAELKLTRPCDMIFFFDALLPDYYITATQERFSCYDRISKAADNTALQNIAKELEDRFGAMPAEVQNLLALARLKHLGSSLGLEKIDQQSSATIFLPSD
>BARIO1_P642668394 YP_001942829 Clim_0770 transcription-repair coupling factor [Chlorobium limicola DSM 245]
GISGSLASLTAALLF-SPILVISGPENDELFENDFNLLV-PS-GSFFSVYDQLPLAMMA-----LADGTS-----VLLHASFSDLQQPLCSPDEIGKKLFRLDREKDAGYEKLKNFLRENQFEHREFVEDEGEFSVRGSIIDVFSFGSPEPVRIEFFGDTVTSLRIFDINSQLS-GKTV-EHITVTGNFSHETG--SGKE-------YMLDYLPESAIGELQKAAAAGRQPVFASASKREIDELAEFLGDI---NLHSGFSFRHLDIYSESDIFGKKGISLKDLHRLKIGDYVVHEDYGIGIFKSLETITV-GSEQECVLVEYEGGDQLFVNVQNINLLSKYTAAEGALPSLSKLGSSKWAAKKEKVRKKIRDIAINLIRLYAERTMKPGFAFCADTIFMREFEASFIFEETPDQLKAIEEVKADMQKPHPMDRLICGDAGFGKTEIAMRAAFKAVESRKQVAILTPTTILAHQHLESFERRFANFPVSITVLSRFIPKKEQLERIEKIENGAIDIVIGTHRLVSKDVRFRDLGLLIIDEEQHFGVEVKEKLRVSHPEVDTLTMSATPIPRTLQFSMLGARDLSIVSTPPKNRQPVETSISDYDPVLIQLAIQREIQRDGQVFFLHNRISGLEEIQHILRELVPYARIVYAHGQMPSKELEKVMMDFMQKEVDVLISTSIIGSGLDISNANTIIINRADMFGLADLYQLRGRVGRSERKAFCYMIAPPIHTLKREAVQRLAVIESFTELGAGFTVALRDLDIRGAGNLLGAEQSGFIHELGFDLYQKMLEETVAELKSTKNCDLVFFFDALIPDYFISAVHERFSFYEKISKARRESELDAIGSELTDRFGELPEEVVNMLLLSRLKIRASSIGIDKIDQQETFTIFLPEN
>BARIO1_P637768673 YP_374556 Plut_0630 Transcription-repair coupling factor [Pelodictyon luteolum DSM 273]
EAVRRSEPFIFDALKSPVRISGMQGSLGPLLAAALHDVW-EGPVLVIAAFDVYDHDLPASGKKACSTADGAIRALPIILASASDLQTSLCRPEEASGRILRIEKDREAGYETLKTFLENNRFVHREFVEDEGEYSVRGSIVDIFPYGTGEPVRIEFFGDTVTSLRSFDINSQLS------GRTLDAAELSADLTGPEAAA-------TMLDYLPPSTLTMLSRRDEARRRTVFAASSEREVRELADFLTEWVPVNLHSGFRFAGIDLFTEADIFGKKGISLKDLQKLKVGDHVVHEDYGVGIFRSLETITA-GSEQECVLVEYEGGDQLFVNVQNINLLSKYAASEGSRPVLSKLGSPKWAARKEKVRSKIRDIAINLIKLYAQRKMQAGFAFGPDSIFMREFESSFIFEETPDQLKAIEEVKKDMQATHPMDRLICGDAGFGKTEIAMRAAFKAVEAKKQVAILTPTTILAHQHLETFTRRFLNFPITIAILSRFVPRAEQQETIRRIKEGKVDIVIGTHRLVSKDVSFRDLGLLVIDEEQHFGVEVKEKLREQFPGVDTLTMSATPIPRTLQFSMLGARDLSIVSTPPKNRQPVETVVTDFEGDLIRSAIEREIAREGQVFFLHNRVASLGEMQQLLHDLVPRARIVFAHGQMPARELEKIMMDVMQGEVDVLISTTIIGSGIDISNANTIIINRADMFGLSDLYQLRGRVGRSDRKAHCYLITPPLNTLKREAIQRLAVIESFTELGSGFTIALRDLDIRGAGNLLGAEQSGYIHDLGFDLYQKMLEQTVAELKSGKPTDMSFFFDALIPEHYVTATHERFMFYEKISRAAAARDIDAVGAELRDRFGPLPEEVETLMLLAKLKITASPLGLEKIDQQKTTTLILPDA
>BARIO1_P640453569 YP_001130663 Cvib_1149 transcription-repair coupling factor [Prosthecochloris vibrioformis DSM 265]
ETLRQSEPFRLSALKAAIDIAGIHGSLAPLLSTAIHAAT-DEVVVILASFELYLHDLPSSGNTTFNTSDEAIEALPLILSLQSELLAPLCSPPESEHRMFPIAVDMECGYERIRQFLTENSFEQRDFVENEGEFSLRGAIMDIFSFGASEPLRVEFFGDTVTSLRQFDINSQLS-GK--T-----------LSSTDAAET-------TILDYLPPSAITLLHQKAATAGTPVFAASSQREIRELNDFLAEL---NLHSGFSFGPLDLYTESDIFGKRGISLGDLQKLKVGDFVVHEDYGIGRFKALETITA-GSEQECVLVEYEGGDQLFVNVQNINLLSKYAASESSTPVLSKLGSSKWAARKEKVRNKLRDIAINLIKLYAQRKMQPGFAFGPDSIFMREFEASFIFDETPDQHKAIEELKKDMQAPHPMDRLICGDAGFGKTEIAMRAAFKAVESKKQAAILTPTTILAHQHAETFARRFENFPITIAVLSRFVPRAEQKETLKKIAAGTVDIVIGTHRLVSKDVQFNDLGLLVIDEEQHFGVEVKEKLREQFPGVDTLTMSATPIPRTLQFSMLGARDLSIVSTPPKNRQPVETLITDYDAELIETAIRREINRDGQVFFLHNRVAGLEEMQRTIRELVPSARIVYAHGQMPARELEKIMMDVMQKEVDVLISTTIIGSGLDISNANTIIINRADMFGLSDLYQLRGRVGRSERKAYCYLITPPLHTLKREAVQRLAVIESFTELGSGFSIALRDLDIRGAGNLLGAEQSGYIHELGFDLYQKMLEETVAGLKSTGTCDLVFFCDALIPEHFITATHERFGFYEKISKARKAESLDTLHKELRDRFGPLPEEVEHLLLLAKLKITASPLGIEKIEQAKTITFVLPGE
>BARIO1_P639765473 YP_911350 Cpha266_0878 transcription-repair coupling factor [Chlorobium phaeobacteroides DSM 266]
ELQQSGAYIHLKKRIEPVEVTGLKGSLSSVLACTLFSES-DCPVLVVSSFELLPHAPVHTFSDELPLALVALVQKPLILSSFDDLLLPLSSPSEALEKLFTLAVEKEAGYEKLLSFLAENGFEPREFVEDEGEFSVRGSIVDVFSFGAKVPLRIEFFGNTVSSLRTFDINSQLS------QKTLTAAEL--TGNASAEI--------VLADYLPLSTISRLQKESDSGRRTVFAASSRREIEELADFIAEV---TLYTGFTFGDLDLYTESDIFGKKGISLKDLQKLKVGDYVVHENYGIGRFKTLETISV-GSEQECVLVEYEGGDQLFVNVQNINLLSKYTASEGSLPSLSKLGSSKWGAKKDKVRRKLRDIAINLIKIYAKRKMTEGFACCADTIFTREFEASFVFDETPDQLKAIEEVKKDMQASHPMDRLICGDAGFGKTEIAMRAAFKAVESKKQVAILTPTTILAHQHGESFTRRFENFPISIAVLSRFVARKDQEKIIEKIKAGQIDIVIGTHRLVSKDVLFKDLGLLVIDEEQHFGVEVKEKLRDSFPGVDSLTMSATPIPRTLQFSMLGARDLSIVSTPPKNRQPVETILTGYDPTIIQSAIRHELQRDGQVFFLHNRISGLEEVQQTLRDLVPYARIVIAHGQMPSKELEKVMMDFMQKEIDVLISTSIISSGLDISNANTIIINRADMFGLSDLYQLRGRVGRSERKASCYMITPPLNTLKKEAVQRLAVIESFTELGSGFTIALRDLDIRGAGNLLGAEQSGFIHELGFDLYQKMLEETVAELKSTKPCDLAFFFDALIPDFYISAIHERFAFYEKISRATSEEVLDSFHSEMKDRFGELPEEVANLLLLAKLKIAASAAGIDKIDQPETFTMFLPDQ
>BARIO1_P637774419 YP_380175 Cag_1882 Transcription-repair coupling factor [Chlorobium chlorochromatii CaD3]
GLYGSFSSLLAATLFAPLMVVCSSN-SFERYENDLEV--------------LLPKGSLCNSADELSHTIEALATKSLLLSLFDDLDVPLCSPSEVESRMFHVTLDATIGYDALKHFLTANGFEQRDFVEDEGEFSLRGSIIDVYPFGAAEPLRIELFGDTITSLRLFDSNSQLSGKNLQQATLTANFTTPNSPI-------------TLLDYLAPETVTLLHTAHHEARQPLFAMSSKREIGELNDFLAQV---TLHSGFRFGSLDLYTESDIFGKRGISLKELQKLKVGDYVVHEDYGIGIFKSLETITA-GSEQESVLIEYANGDQLFVNVQNIHLLSKYTASENSSPTLSKLGSSKWAAKKEKVRKKIRDIAINLIKVYAQRKMQPGFAFAPDSIFMREFEAAFIFDETPDQLRAINDVKKDMQASHPMDRLICGDAGFGKTEIAMRSAFKAVESKKQAAVLTPTTILAHQHADSFTRRFANFPISIAVLSRFVSRKEQLSLLKKIEEGKIDIVIGTHRLVSKDVHFKDLGLLVIDEEQHFGVEVKEKLREQFPTIDTLTMSATPIPRTLQFSMLGARDLSIVSTPPKNRQPVETIITDFDAALIQSAIQRELQREGQVFFLHNRIAGLETIAESLRELVPSARIVYAHGQMPTRELEKIMMDFMQQEVDVLISTTIIGSGLDISNANTIIINRADLFGLSDLYQLRGRVGRSERKAYCYLITPPMKTLKKDALQRLAVIESFTELGSGFNIALRDLDIRGAGNLLGAEQSGYIHELGFDLYQKMLEETVAELKTNKPCDLLFFFDALIPDYYVAATQERFAFYNRIAKATRNEQLDAIASELCDRFGKLPEEVTNLLMITKLKLIGTLLGLEKIDQPQSTMLYLPDQ
>BARIO1_P642728343 YP_002018967 Ppha_2147 transcription-repair coupling factor [Pelodictyon phaeoclathratiforme BU-1]
DTIRQSKPFIKEALR-PDKTGCYDPADVAGLQGSLSSIMAPSPLMLLCSFERYENDFAAPKECICNTSDESIGALSLILSFFDDLDVTLCQPGEAENRIFRLKTEFDAGYEPLKRFLTANSFEQREFVEDEGEFSVRGSIIDVFPFGAGEPLRIEFFGDTITSLRVFDINSQLS-GK---TLLAADLTASFTDAAPESET-------TILDYLDPATLAQLQQETAEHKKPLFATSSRREIAELTDFLAEV---NLHTGFTFGDLDLYTESDIFGKRGISLKDLQKLKVGDYVVHEDYGIGIFRSLETITA-GSEQECVLVEYAGGDKLFVNIQNIRLLSKYTASESSLPALSKLGSSKWAAKKDKVRKQLRDIAINLIKVYAQRKMQIGFGFAPDSIYMREFEASFIFDETPDQLKAIHDVKKDMQEPHPMDRLICGDAGFGKTEIAMRAAFKAVESGKQVAVLTPTTILSHQHAESFTRRFENFPISIAVLSRFVPRKEQQKVIKRIAEGTIDIVIGTHRLVSKDVLFKDLGLLVIDEEQHFGVEVKEKLREQFPGVDTLTMSATPIPRTLQFSMLGARDLSIVSTPPKNRQPVETLITDYDPALIQSAIRREIKREGQVFFLHNRIASLDDILQTLRELVPSARIVFAHGQLPPRELEKIMMDFMQKEVDVLISTTIIGSGLDISNANTIIINRADMFGLSDLYQLRGRVGRSERKAYCYLIAPPLNTLKKEAVQRLAVIESFTELGSGFNIALRDLDIRGAGNLLGAEQSGYIHELGFDLYQKMLEETVAELKSTKTCDLLFFFDALIPEYYLTATPERFAFYDKIAKASTEHKVDTLEAELKDRFGPLPEEVGNLLLLTKLKITGSALGLEKIDQPQSAILFLPDQ
>P640955017 YP_001495941 A1I_02665 Transcription-repair coupling factor [Rickettsia bellii OSU 85-389]
KFPQAAKSFFTIDSFKDFVLVTSNEEEALQLYKQALFFLPSENIYYFPSYDTIPYDHTSPNCNILSKRAETLSKLKLVITHATNLLNKLPPKDFFAKYYLKLFPKMKLSANELSKFLVENSFTRNASTVDVGEFAVRGEIVDLILPE---SYRINFSWDYVESIKQFDIDTQISTRSCNELIISPANEIVLNPEKFSGYEQLLPLFYGLTDYLNN-LVEVIKAN--SRKKIIIGSSVLSSFERVKSIIENL---PLNQSFSTPEYLFIAASELLEELKNILLELDHLAEGELIVHKDHGIGQFLKLEALEIKGKLHDFLKILYAGNDKLYIPVENIEVIKKYGSDV---AQLDKLGSVSWQKNKAKLKNRIKEIALHLMQIAAKRKLNTTAAIEFDLEEYDKFCAKFPFTETEDQLNAINDIREDLSNGMLMDRLICGDVGFGKTEVAMRASFKSLNENPQVAVVVPTTILCSQHFARFTERFKDSDLNIKQLSSVVSSKEAKIVRSELESGKINIIIGTHSLLHKVTKFCNLKLLIIDEEQHFGVGQKEFLKSLKSSTHVLAMSATPIPRTLQMSMTDLKELSIIATPPLNRLEVRTSVMPFDPVIIRDALLREHFRGGKSFFVVPRINDIEDIEKQLKQIVPELSYKVAHGKMSPNKIDEIMSEFYAGKFDILISTTIIESGIDIQDANTMIIHKADMLGLSQLYQLRGRIGRGKMRGYAYLTLPSHKKMTPHSLRRLEIIQNSCALGSGFTIASHDMDLRGFGNLIGEEQSGQIREVGTELYQEMLEEQIAIFKD-FIPTINLGLSVFIPDNYVSDSVLKLGLYRRIGNLNDDLEVEKFKDEMIDRFGSLPTEFNNLLDIVKIKLLCFKLNIENLDSGDNGFVIKFYK
>P637930964 YP_538021 RBE_0851 Transcription-repair coupling factor [Rickettsia bellii RML369-C]
KFPQAAKSFFTIDSFKDFVLVTSNEEEALQLYKQALFFLPSENIYYFPSYDTIPYDHTSPNCNILSKRAETLSKLKLVITHATNLLNKLPPKDFFAKYYLKLFPKMKLSANELSKFLVENSFTRNASTVDVGEFAVRGEIVDLILPE---SYRINFSWDYVESIKQFDIDTQISTRSCNELIISPANEIVLNPEKFSGYEQLLPLFYGLTDYLNN-PVEVIKAN--SRKKIIIGSSVLSSFERVKSIIENL---PLNQSFSTPEYLFIAASELLEELKNILLELDHLAEGELIVHKDHGIGQFLKLEALEIKGKLHDFLKILYAGNDKLYIPVENIEVIKKYGSDV---AQLDKLGSVSWQKNKAKLKNRIKEIALHLMQIAAKRKLNTTAAIEFDLEEYDKFCAKFPFTETEDQLNAINDIREDLSNGMLMDRLICGDVGFGKTEVAMRAAFKSLNENPQVAVVVPTTILCSQHFARFTERFKDSDLNIKQLSSVVSSKEAKIVRSELESGKINIIIGTHSLLHKVTKFCNLKLLIIDEEQHFGVGQKEFLKSLKSSTHVLAMSATPIPRTLQMSMTGLKELSIIATPPLNRLEVRTSVMPFDPVIIRDALLHEHFRGGKSFFVVPRINDIEDIEKQLKQIVPELSYKVAHGKMSPNKIDEIMSEFYAGKFDILISTTIIESGIDIQDANTMIIHKADMLGLSQLYQLRGRIGRGKMRGYAYLTLPSHKKMTPHSLRRLEIIQNSCALGSGFTIASHDMDLRGFGNLIGEEQSGQIREVGTELYQEMLEEQIAIFKD-FIPTINLGLSVFIPDNYVSDSVLKLGLYRRIGNLNDDLEVEKFKDEMIDRFGSLPTEFNNLLDIVKIKLLCFKLNIENLDSGDNGFVIKFYK
>P637029797 NP_220966 RP598 TRANSCRIPTION-REPAIR COUPLING FACTOR (mfd) [Rickettsia prowazekii Madrid E]
KFPATAKCFYVIDNFKDFILSVSNEEEALQLYKQALFFSSNDNIYYFPSYDTIPYDHTSPNANIVSRRAETLTKLKLLITHAANLLNKLPPKDFFSKYFLKLYPKIKFTMDELSMLLVENSFTRNTSSIDVGEFAVRGEIIDIILPG---PYRINFSWDYIESIKEFDINTQISTKYCAELVISPANEIVLNSEKFAGYEQLLPLFYSLVDYLNN-PIEIIKAN--FHKKIIICSSVLSSFERIKSIIQNI---PLNQSFYTKEYLFITSSELLEELKNILLELDNLKEGEFVVHKDHGIGQFLKLEAFKIQGKLHDFLKILYFGNDKLYVPVENIEVIKKYGSDN---AELNKLGSVAWNKSKAKLKNRIKEISLHLIQIAAKRKLNISTPIELDLEAYDKFCANFPFSETEDQLTAINDIREDLTNGMLMDRLICGDVGFGKTEVAMRAVFKSLNEYPQVAVVVPTTILCSQHFSRFIERFKGFGLNIKQLSSVISSKEANIIRLELASGKINIIIGTHALLHKNTKFFNLKLLIIDEEQHFGVSQKEFLKSLKSSTHVLAMSATPIPRTLQMSMTGLKELSIIATPPLNRLEVRTSVMPFDPVIIRDALLREHFRGGRSFYVAPRIKDMEDIEKQLKQIVPELSYKIAHGKMTPSKIDEVMSEFYVGKFDILISTTIIESGIDIAEANTMIIHKADTLGLSQLYQLRGRIGRGKIRGYAYLTVASNKKITSHSLRRLEIIQNSCSLGSGFTIASHDADLRGFGNLIGEEQSGQIKEVGTELYQEMLEEQIALLKD-FIPNINLGLSVFIPDSYVSDSALKIGLYRRIGNLSNEMEVEKFKDEMIDRFGLLPIEFNNLLDIVKIKLLCFKLNIENLDSGDDGFVIRFYK
>P637531151 YP_067533 RT0586 transcription-repair coupling factor (superfamily helicase II) [Rickettsia typhi Wilmington]
KFPATAKCFFAIDNFKDFILSVNNEEEALKLYKQAFFFSSNENIYYFPSYDTIPYDYTSPNTNIISRRAETLTKLKLLITHAANLLNKLPPKDFFSKYFLKLYPKIKFTIDELSMLLVENSFTRNISSNDVGEFSVRGEIIDIILPG---PYRINFSWDYIESIKEFDINTQISTKYCTELVISPVSEIVLNSKKFPGYEQLLPLFYSLVDYLND-PIELIKAN--FHKKIIICSSVLSSFERIKSIIQNI---PLNQSFYTKEYLFITSSELLEELKNILLELDNLAEGEFVVHKDHGIGQFLKLEAFEIQGKLHDFLKILYSGNDKLYVPVENIEVIKKYGSNN---VELDKLGSAAWHKSKAKLKDRIKEISLHLIQIAAKRKLNISTPIEFDLEEYDKFCANFPFIETEDQLTAINDIRKDLTNGMLMDRLICGDVGFGKTEVAMRAVFKSLNEYPQVAVVVPTTILCSQHFSRFIERFKGFGLNIKQLSSVVSSQEANIIRLELASGKINIIIGTHTLLHKNIKFFNLKLLIIDEEQHFGVSQKEFLKSLKYSSHVLAMSATPIPRTLQMSLTGLKELSIIATPPLNRLEVRTSVMPFDTVIIRDALLREHFRGGRSFYVVPRIKDMEDIEKQLKQIVPELSYKIAHGKMTPSKIDEVMSEFYAGKFDILISTTIIESGIDITEANTMIIHNADTLGLSQLYQLRGRIGRGKIRGYAYLTVASNKKLMQHSLRRLEIIQNSCALGSGFTIASHDADLRGFGNLIGEEQSGQIREVGAELYQEMLEEQIALLKD-FIPNINLGLSVFIPDHYVSDSALKIALYRRIGNLSNEIEVEKFKDEMIDRFGLLPIEFNNLLDIVKIKLLCFKLNIENLDSGDDGFVIRFYK
>P640951086 YP_001492098 A1E_01840 hypothetical protein [Rickettsia canadensis McKiel]
KFPAAAKSFFAIDNLKDLILSVSNEEDVLQLYKQALFFSSNESIYYFPSYDTVPYDHASPSPSIVSKRAETLTKLKLLITHAANLLNKLPPKDFFSKYFLKLFPKMKFTTDELAMFLVENSFTRNTSSVDVGEFVVRGEIIDIILPG---PYRINFSWDYIESIKEFDIDTQISTKSCTELVITPVNEIVLNSEKFSGYEQLLPLFYNLVDYLND-PIEIIKAH--SSKKIVIGVASLSGLERVKSIIQNL---PLNQSFDTKEYLFITVSELLEELKNILLELDNLAEGEFVVHKDHGIGKFLKLEALEIKGKLHDFLKILYAGNDKLYIPVENIEVIKKYGNDN---AELDKLGSVSWQRSKAKLKNRIKEIALHLIQIAAQRKLNTNASIEFDLEEYDKFCAHFPFSETEDQLTAINDIREDLRSGMLMDRLICGDVGFGKTEVAMRAVFKSLNEYPQVAVVVPTTILCSQHVSRFTERFKGFGLNIKQLSSIISPKEAKIIRSELESGKINIIIGTHSLLHKNTKFFNLKLLIIDEEQHFGVSQKEFLKQLKSSSHVLAMSATPIPRTLQMSMTGLKELSIIATPPLNRLEVRTSVMPFNPVIIRDALLREHFRGGRSFYVVPRINDILDIEKQLKQIVPELSYKIVHRKMPYNKIDEVMSEFYAGKFDILVSTTIIESGIDIQGANTMIIHKADMLGLSQLYQLRGRIGRGKMRGYAYLIVESHKKMTAHSLRRLEIIQNSCALGSGFTIASHDMDLRGFGNLIGEEQSGQIREVGTELYQEMLEEQIALFKD-FIPTINLGLSVFIPDHYVSDSALKIGIYRRIGNLSNEIEVEKFKDEMIDRFGSLPTEFNNLLDIVKIKLLCFKLNIENLDSGDNGFVIKFYK
>P641234193 YP_001499564 RMA_0945 Transcription-repair coupling factor [Rickettsia massiliae MTU5]
KFPAAAKSFFAIDNFKDFILSASNEEEALQLYKQALFFSSNENIYYFPSYDTIPYDHTSPNANILSTRAETLTKLKLLITHTANLLNKLPPKDFFSKYFLKLSPKMKFTTDELAMFLVENSFTRNASSIDAGEFAVRGEIIDIILPG---PYRIHFSWGYIESIKEFDIDTQISTKSCRELIISPANEIVLNSEKFTGYEQLLPLFYNLIDYLND-PIEVIKAN--SHKKIIIGSSVLSSCERIKSIIQNI---PLNQSFYTKEYLFITASELLEELKNILLELDNLAEGEFVVHKDHGIGQFLKLEALEIKGKPHDFLKILYAGNDKLYIPVESIEVIKKYGNDN---AELDKLGSVSWQRSKAKLKNRIKEIALHLIQIAAKRKLNSSASVEFDLEEYDKFCANFPFSETEDQLTAINDIKEDLRNGMLMDRLICGDVGFGKTEVAMRAVFKSLNEHPQVAVVVPTTILCSQHFSRFIERFKGFGLNIKQLSRVISSKEAKIIRSELESGKINIIIGTHSLLHKNIKFFNLKLLIIDEEQHFGVGQKELLKSLKSSSHVLAMSATPIPRTLQMSMTGLKELSIIATPPLNRLEVRTSVMPFDPVIIRDALLREHFRGGRSFYVVPRIKDIEDIEKQLKQIVPELSYKIAHGKMTPSKIDEVMSEFYAGKFDILVSTTIIESGIDIAEANTMIIHKADMLGLSQLYQLRGRIGRGKMRGYAYLTVASHKKMTSHSLRRLEIIQNSCALGSGFTIASHDMDLRGFGNLIGEEQSGQIKEVGTELYQEMLEEQIAIFKD-FIPTINLGLSVFIPDNYVADAALKLGLYRRIGNLRNEIEVETFKDEMIDRFGLLPIEFNNLLDIVKIKLLCFKLNIANLDSGDNGFVIKFYK
>P637194164 NP_360550 RC0913 transcription-repair coupling factor [Rickettsia conorii Malish 7]
KFPAAAKSFFAIDNFKDFILSASNEEEALQLYKQALFFSSNENIYYFPSYNTIPYDHTSPNANILSRRAETLIKLKLLITHTANLLNKLPPKDFFSKYFLKLSPKMKFTTDELAMFLVENSFTRNASSIDVGEFAVRGEIIDIILSG---PYRIHFSWGYIESIKEFDIDTQISTKSCRELIISPANEIVLNSEKFTGYEQLLPLFYNLIDYLND-PIEVIKAN--SHKKIIIGSSVLSSFERIKSIIQNI---PLNQSFYTKEYLFITASELLEELKNILLELDNLAEGEFVVHKDHGIGQFLKLEALEIKGKPHDFLKILYAGNDKLYIPVESIEVIKKYGNDN---AELDKLGSVSWQRSKAKLKKRIKEIALHLIQIAAKRKLNSSASVEFDLEEYDKFCANFPFSETEDQLIAINDIKEDLRNGMLMDRLICGDVGFGKTEVAMRAVFKSLNEHPQVAVVVPTTILCSQHFSRFIERFKGFGLNIKQLSSVISSKEAKIIRSELESGKINIIIGTHSLLHKNIKFFNLKLLIIDEEQHFGVGQKEFLKSLKSSSHVLAMSATPIPRTLQMSMTGLKELSIIATPPLNRLEVHTSVMPYDPVIIRDALLREHFRGGRSFYVVPRIKDIEDIAKQLKQIVPELSYKIAYGKMTPSKIDEVMSEFYAGKFDILVSTTIIESGIDIAEANTMIIHNADMLGLSQLYQLRGRIGRGKMRGYAYLTVASHKKMTSHSLRRLEIIQNSCALGSGFTIASRDMDLRGFGNLIGEEQSGQIKEVGTELYQEMLEEQIAIFKD-FIPTINLGLSVFIPDNYVADAALKLGLYRRIGNLSNEIEVETFKDEMIDRFGLLPIEFNNLLDIVKIKLLCFKLNIENLDSGDNGFVIKFYK
>P641529579 YP_001650286 RrIowa_1085 transcription-repair coupling factor [Rickettsia rickettsii Iowa]
KFPAAAKSFFAIDNFKDFILSASNEEEALQLYKQALFFSSNENIYYFPSYNTIPYDHTSPNANILSRRAETLIKLKLLITHTANLLNKLPPKDFFSKYFLKLSPKMKFTTDELAMFLVENCFTRNASSIDAGEFAVRGEIIDIILSG---PYRIHFSWGYIESIKEFDIDTQISTKSCRELIISPANEIVLNSEKFTGYEQLLPLFYNLIDYLND-PIEVIKAN--SHKKIIIGSSVLSSFERIKSIIQNI---PLNQSFYTKEYLFITASELLEELKNILLELDNLAEGEFVVHKDHGIGQFLKLEALEIKGKPHDFLKILYAGNDKLYIPVESIEVIKKYGNDN---AVLDKLGSVAWQRSKAKLKKRIKEIALHLIQIAAKRKLNSSASVEFDLEEYDKFCANFPFSETEDQLIAINDIKEDLRNGMLMDRLICGDVGFGKTEVAMRAVFKSLNEHPQVAVVVPTTILCSQHFSRFIERFKGFGLNIKQLSSVISSKEAKIIRSELESGKINIIIGTHSLLHKNIKFFNLKLLIIDEEQHFGVGQKEFLKSLKSSSHVLAMSATPIPRTLQMSMTGLKELSIIATPPLNRLEVHTSVMPFDPVIIRDALLREHFRGGRSFYVVPRIKDIEDIAKQLKQIVPELSYKIAYGKMTPSKIDEVMSEFYAGKFDILVSTTIIESGIDIAEANTMIIHNADMLGLSQLYQLRGRIGRGKMRGYVYLTVASHKKMTSHSLRCLEIIQNSCALGSGFTIASRDMDLRGFGNLIGEEQSGQIKEVGTELYQEMLEEQIAIFKD-FIPTINLGLSVFIPDNYVADAALKLGLYRRIGNLSNEIEVETFKDEMIDRFGLLPIEFNNLLDIVKIKLLCFKLNIENLDSGDNGFVIKFYK
>P640954067 YP_001495011 A1G_05040 transcription-repair coupling factor [Rickettsia rickettsii Sheila Smith]
KFPAAAKSFFAIDNFKDFILSASNEEEALQLYKQALFFSSNENIYYFPSYNTIPYDHTSPNANILSRRAETLIKLKLLITHTANLLNKLPPKDFFSKYFLKLSPKMKFTTDELAMFLVENCFTRNASSIDAGEFAVRGEIIDIILSG---PYRIHFSWGYIESIKEFDIDTQISTKSCRELIISPANEIVLNSEKFTGYEQLLPLFYNLIDYLND-PIEVIKAN--SHKKIIIGSSVLSSFERIKSIIQNI---PLNQSFYTKEYLFITASELLEELKNILLELDNLAEGEFVVHKDHGIGQFLKLEALEIKGKPHDFLKILYAGNDKLYIPVESIEVIKKYGNDN---AVLDKLGSVAWQRSKAKLKKRIKEIALHLIQIAAKRKLNSSASVEFDLEEYDKFCANFPFSETEDQLIAINDIKEDLRNGMLMDRLICGDVGFGKTEVAMRAVFKSLNEHPQVAVVVPTTILCSQHFSRFIERFKGFGLNIKQLSSVISSKEAKIIRSELESGKINIIIGTHSLLHKNIKFFNLKLLIIDEEQHFGVGQKEFLKSLKSSSHVLAMSATPIPRTLQMSMTGLKELSIIATPPLNRLEVHTSVMPFDPVIIRDALLREHFRGGRSFYVVPRIKDIEDIAKQLKQIVPELSYKIAYGKMTPSKIDEVMSEFYAGKFDILVSTTIIESGIDIAEANTMIIHNADMLGLSQLYQLRGRIGRGKMRGYVYLTVASHKKMTSHSLRCLEIIQNSCALGSGFTIASRDMDLRGFGNLIGEEQSGQIKEVGTELYQEMLEEQIAIFKD-FIPTINLGLSVFIPDNYVADAALKLGLYRRIGNLSNEIEVETFKDEMIDRFGLLPIEFNNLLDIVKIKLLCFKLNIENLDSGDNGFVIKFYK
>P640952726 YP_001493705 A1C_04675 Transcription-repair coupling factor [Rickettsia akari Hartford]
KFPTIAKSFFVIDNFKDFILSVNNEEEALQLYKQALFFSSNENIYYFPSYDTIPYDHTSPNTNILSRRAETLTKLKLLITHAANLLNKLPPKDFLSKYFLKLSPKMKFTTDELAMFLVENSFTRNASSIDVGEFAVRGEIIDIILPG---PYRINFSWDYIESIKEFDIDTQISTKSCMELVISPANEIVLNSEKFAGYEQLLPLFYSLVDYLNN-PIEIIKVH--SSKKAVISAASLSGLERLKSIIQNI---PLNQSFYTKEYLFIAASELLEELKNILLELDNLVEGEFVVHKDHGIGQFLKLEALEIKGKLHDFLKILYAGNDKLYIPVENIEVIKKYGNDN---AELDKLGSVSWQRTKAKLKNHIKEIALHLIQIAAKRKLNSSAAVEFDLEEYDKFCANFPFSETEDQLTAINDIKEDLRNGLLMDRLICGDVGFGKTEVAMRAVFKSLNEHPQVAVVVPTTILCSQHFSRFIERFKGFGLNIKQLSSVVSSKEAKIIRAELESGKINIIVGTHSLLHKNIKFFNLKLLIIDEEQHFGVGQKEFLKSLKSSSHVLAMSATPIPRTLQMSMTGLKELSIIATPPLNRLEVRTMVMPFDSVIIRDALLREHFRGGRSFYVVSRIKDIEDIEKQLKHIVPELSYKIAHGKMTPSKIDEVMSEFYAGKFDILVSTTIIESGIDIAEANTMIIHKADMLGLSQLYQLRGRIGRGKVRGYAYLTVANHKKMTSHSLRRLEIIQNSCALGSGFTIASHDMDLRGFGNLIGEEQSGQIKEVGTELYQEMLEEQIAIFKD-FIPTINLGLSVFIPDHYISDSALKLGLYRRIGNLSNEIEVEKFKDEMIDRFGSLPIEFNNLLDIVKIKLLCFKLNIENLDSGDNGFVIKFYK
>P637660731 YP_246383 RF_0367 Transcription-repair coupling factor [Rickettsia felis URRWXCal2]
KFPATAKSFFATHNFKDFILSSSNEDEALQLYKQALFFSSNENIYYFPSYDTIPYDHTSPNANILSRRAEILTKLKLLITYAANLLNKLPPKDFFSKYFLKLSPKMKFTTDELAMFLVENSFTRNASSIDVGEFAVRGEIIDIILPG---PYRINFSWDYIESIKEFDIDTQISTKSCSELVISPANEIVLNSEKFAGYEQLLPLFYSLVDYLND-PIEIIKAH--SSKKIVIGAASLSGLERIKSITQNI---PLNQSFYTKEYLFITASELLEELKNILLELDNLAEGEFVVHKDHGIGQFLKLEALEIKGKLHDFLKILYAGNDKLYIPVENIEVIKKYGNDN---AELDKLGSSSWQRSKAKLKNRIKEIALHLIQIAAKRKLNSSASVEFDLEEYDKFCANFPFSETEDQLTAINDIKEDLRNGMLMDRLICGDVGFGKTEVAMRAVFKSLNEHPQVAVVVPTTILCSQHFSRFIERFKGFGLNIKQLSSVISAKEAKIIRSELESGKINIIIGTHSLLHKNTKFFNLKLLIIDEEQHFGVGQKEFLKSLKSSSHVLAMSATPIPRTLQMSMTGLKELSIIATPPLNRLEVRTMVMPFDPVIIRDALLREHFRGGRSFYVVPRIKDIEDIEKQLKQIVPELSYKIAHGKMTPSKIDEVMSEFYAGKFDILVSTTIIESGIDIAEANTMVIHKADMLGLSQLYQLRGRIGRGKVRGYAYLTVASHKKMTSHSLRRLEIIQNSCALGSGFTIASHDMDLRGFGNLIGEEQSGQIKEVGTELYQEMLEEQIAIFKD-FIPTINLGLSVFIPDNYISDSALKLGLYRRIGNLSNEIEVEKFKDEMIDRFGSLPIEFNNLLDIVKIKLLCFKLNIENLDSGDNGFVIKFYK
>BARIO1_P642681455 YP_001957440 Aasi_0272 hypothetical protein [Candidatus Amoebophilus asiaticus 5a2]
GLAGSLPAILGAALHQTQIFILQDKEAAAYLYTDLLNLLGPQKVVLYP---AIEYQTDSKAFLDTAANLMILQQLKIIVTYPEAIVTKVISQDSLTKNSWSIQPKEKLVLSEFVDTLIDKGFEKVDFVYEAGQFAIRGGIIDIFSYGSQLPYRVELLGNEIESIRLFNPSNQLSTEKVKEAILLSYTE-PFNTTKNKREENGRPQQI------SNSTSENLQQNQKLGLENLILVESTSQFERLANMLEEI---GISQGYID--IACYTEHQIFGRQAFTLKELNNLQPGDYVVHIDHGIARFSGLSRVSVD-KVQEVLRLVYKDNDVVYLSLHALHKISKYTGKEGIVPTMSKLGSGAWEQKKSKVKHKVQVIAKELIQLYSKRKYAPGFAFSKDTFLQAEMESSFIYEDTPDQASATADVKKDMEAPHPMDRLVCGDVGFGKTEVAIRAAFKAVYDRKQVAVLVPTTILALQHYESFKNRLSNFPVDVKYVNRFKSKQEIKRIQEAAAQGKIDILIGTHTILGKAFEFKDLGLLVVDEEQKFGVKAKDRIKEFKVNVDVLTLTATPIPRTLHFSLMGARDLSIIATPPSNRQPVQTSIHTFDKKIVQDAIHYEVQRGGQVFFVHNRINNIQEVANMLYKLVPEYRIGIAHGQMDGDQLEKKMLTFIAGGYDILVSTNIIESGLDIPNANTIIINDSHMFGLSDLHQMRGRVGRSNKKAFCYLIAPPNSSLTEEARKRLSTLEEFTELGDGFKVAMRDLDIRGAGNLLGAEQSGFIADVGFEAYCKILDEAVQELKEEIDCTLETDLELLIPTSYVNNDTERLRLYTKLDNIENEKGLENFQVEIQDRFGALPTSVQELIKAVKLRWVAKKLCLQKIRLKDNIMRCYFIP
>BARIO1_P638073441 YP_680030 CHU_3453 transcription-repair coupling factor [Cytophaga hutchinsonii ATCC 33406]
GLSGSMDALIAAALSKSHVFILADKDEAYFFQNDLQQLL-GLPVFVFPASYKKPYHYEQVENANILQRAETLNYISYLVTYPLALSEKVINKRSLVENTFIARIGEKLNREFMEEFLQSYGFERTDFVYEAGQYAIRGGIIDIFSYANELPFRIELFGTEIESIRTFNPESQLSVDNIPVLSITPNVQTRLLKET-----LWIKDYAIIEECFSKVSQEDFRLRINQGYKIIIASESHQQIQRLHSILEEI---PLREGFIDLQILCYTDHQIFDRKSITLKELRTLQPGDFVAHADFGIARFAGLERIENNGHTQEAIRLVFRDDDLMVISIHALHKISRYSGKDGQPPVMSKLGSGDWENKKSKVKRQVKDIAKELIQLYAKRKAAPGFAYTPDSFLQVELESSFMYEDTPDQSKATADVKKDMESPHPMDRLVCGDVGFGKTEIAVRAAFKAVCDGKQVAVLVPTTILAMQHYKTFRDRLSRFPCVVEYINRFKTAGQIKETLKRVKEGKTNILIGTQRVISKDVEFQNVGLLIIDEEQKFGVKVKEKLREFKINIDTLTLTATPIPRTLHFSLMGARDLSIIATPPPNRQPVTTEIHVFDEAFIRDAISFELKRGGQVFFVHNRVKDIDGMAFLIKKLVPDARVTFAHGQMEGDKLEEVMLKFVEGEYDVLVSTNIIESGLDIPNANTIIINSAHMFGLSDLHQMRGRVGRSNKKAFCYLLTPSVSALTGDSRKRLSVLEEFSDLGDGFKVAMRDLDIRGAGNMLGAEQSGFITDLGFDMYHKILDEAIQELKETQDCVIETDLSILIPDTYVTNISERLSLYSTIDNIKNETELTSFIQGLTDRFGPLPKEVIDLTETIKLRWLAQELGFEKLTIKNDVMRCQFVP
>BARIO1_P639720019 YP_863170 orf3121 transcription-repair coupling factor [Gramella forsetii KT0803]
GLVGSALSFVVADAFKPFLLIFNDKEEAAYYLNDLEQLG-EKNVLFYPGSYRRPYQIEETDNANVLLRAEVLNRI-LIVTYPDALFEKVVTRKELDKSTLKIAVGDELSIDFVNEVLFEYQFKRVDFVTEPGEFSVRGGIIDVFSFSHDEPYRIEFFGDEIDSIRTFDVETQLSTDKKKKISVMPNVENKHLDELYKKAE-------EAFKELSED--ENLVENQEAGYTNFICCVSDQQAKRFHDIFEDF---SMFQGFVDEDLKTVCDHQIFERQAITLKELTNLEVGDYVTHIDHGIGKFGGLQKIDVEGKKQEAIKLIYGERDILYLSIHSLHKISKFNGKDGKPPKIYKLGSNAWKNLKKKTKARVKHIAYDLIKLYAKRRLEKGFKFDPDSYLQHELEASFMYEDTPDQSSSTAAVKADMENERPMDRLVCGDVGFGKTEIAIRAAFKAVDNNKQVAILVPTTILAFQHHRTFTERLKDFPVRIDYLNRFRTAKERKETLADLEAGKVDIIIGTHQLVSKAVKFKDLGLLVVDEEQKFGVAVKDKLKTIKENVDTLTLTATPIPRTLQFSLMAARDLSTITTPPPNRYPIESHVIRFSEETIRDAVSYEIQRGGQVFFIHNRVENIKEVAGMIQRLVPDAKIGVGHGQMEGKKLEKLMLSFINGEFDVLVSTTIVESGLDVSEANTIFINNANNFGLSDLHQMRGRVGRSNKKAFCYFITPPYSAMTEDARKRITALEQFSELGSGFNIAMKDLEIRGAGDLLGGEQSGFINDIGFDTYQKILNEAIEELKENKDTQIDTDFELLFPDDYINNITERLNLYTKLNELKTEEELQKFEADLVDRFGELPTQAVDLLNSVRIKWIAAKIGLERVIKNKMVGYFIADQ
>BARIO1_P640509416 YP_001193553 Fjoh_1202 transcription-repair coupling factor [Flavobacterium johnsoniae UW101]
GLLGSAVSFIIRSVFKPFLIVLDNKEEAAYYLNDLEQMIGEQDVLFYPVSFRRPYQVDETDNANVLLRAEVLNRIAVIVTYPEALFEKVVTRQQLDKNTLKVSLNDKISIDFINEVLFEYEFKRVDFITEPGEFSVRGGIVDVFSFSNDHPYRIEFFGNEVDSIRTFDVETQLSVETHKKITIIPNVENKIFQE-------------SFLDYIAEKTVNNLSDNHFNGYVNYLFCSNETQAKRFHDIFESL---PLYQGFIDEEITAYTDHQIFERQNITLKELTALSVGDYVTHIDHGIGKFGGLQKIQVEGKTQEAIKLVYADNDIVYVSIHSLHKISKYNGKDGTPPKIYKLGSNAWKVLKQKTKARVKHIAFNLIQLYAKRRLEKGFQFAPDSYLQNELESSFIYEDTPDQMKSTQEVKADMESDRPMDRLVCGDVGFGKTEVAIRAAFKAVDNSKQVAVLVPTTILAYQHYRTFSERLKDMPVSIGYLNRFRTAKQKTQTLKDLAEGKLDIVIGTHQLVNKNVVFKDLGLLIVDEEQKFGVNVKDKLKTIAANVDTLTLTATPIPRTLQFSLMAARDLSVITTPPPNRYPIETNVVGFNEEIIRDAISYEIQRNGQVFFINNRIENIKEVAGMIQRLVPNARVGIGHGQMDGAKLEELMLGFMNGDFDVLVATTIIESGLDVPNANTIFINNANNFGLSDLHQMRGRVGRSNKKAFCYFICPPYSSMTEDARKRIQALEQFSELGSGFNIAMKDLEIRGAGDLLGGEQSGFINEIGFDTYQKIMNEAIEELKENKDIQIDADFELLFPDEYINNVSERLVLYNELGAIKDEAGLQEFERKLIDRFGPLPKQATALLNSIRIKWIATKVGIEKLVQGKMIGYFVSDQ
>BARIO1_P640757838 YP_001295128 FP0192 Transcription-repair coupling factor [Flavobacterium psychrophilum JIP02/86]
GLVGSSFSFVIEALFASFLLLCNEKEEAAYILNDLEQLVSDQDVLFYPSSYRRPYQIEDTDNANVLLRSEVLNRLAIIVSYPEAIFEKVVTKKELDKNTLKISVGDLVSIDFINEVLFEYEFKRVDFITEPGEFSVRGGILDVFSFSNDNPYRIEFFGNEVDSIRTFDVATQLSIEKKNKIAIIPNFENKFLQE-------------SFLEYINPKTTNNLKDNQAHNYKNYLFCSNEQQAKRFHDIFESL---PLYQGFIDEEIACYTDHQIFERQTITLKELTSLVVGDYVTHIDHGIGKFGGLQKIQVEGKTQEAIKLAYADNDIVYVSIHSLHKISKYTGKDGAPPKIYKLGSGAWKALKQKTKARVKHIAFNLIQLYAKRRLDKGFAFAPDSYLQHELESSFIYEDTPDQLKSTQEVKADMESDRPMDRLVCGDVGFGKTEVAIRAAFKAVDNGKQVAILVPTTILAYQHYRTFTERLKDMPVTINYLNRFKTAKQKAETLKDLEAGKVDIVIGTHQLVSKNVIFKDLGLLIVDEEQKFGVNVKDKLKTITQNVDTLTLTATPIPRTLQFSLMAARDLSVITTPPPNRYPIETHVVGFNEETIRDAISFEIERGGQVFFINNRIENIKEVAGMIQRLVPDAKVGIGHGQMDGKKLEELMLAFMEGEFDVLVATTIIESGLDVPNANTIFINNANNFGLSDLHQMRGRVGRSNKKAFCYFICPPYSVMTEDARKRIQALEQFSELGSGLNIAMKDLEIRGAGDLLGGEQSGFINEIGFDTYQKIMNEAIEELKENKDLQIDSDFELLFPDDYINSVTERLALYNALAIIKEENGLLEYEKQLIDRFGPLPKQAIALLNSLRIKWIATQIGVEKLIQGKMVCYFVSDQ
>BARIO1_P642655893 YP_001929830 PGN_1714 transcription-repair coupling factor [Porphyromonas gingivalis ATCC 33277]
GLCGSSAALIVKLLH-PVLCIASDMEEAGYLFSDLEQLGGEGSALFFPSYKAIKYGHTDAAQQVL--RAEALAALPLVVSYPEAVAERVVAGDILEKEMHSIRQGDRLDRDFLRDLLLEWGFERTDYVYEPGQFAVRGSLLDVFSFSRELPVRIDFFDDEIESIRLFEVESQLSVGTLSEVVLMP------DVARPFLEDRLQMVFTPLFD--DGEGFDQLEQWRDAGYRLLLATASDKQYERVEEILSEL---TLHEGFSDEAIVLLTDHQLFDRVTLSLKELNQFSQGDYIVHIDHGIGRFGGLITTDV-GKRQEVIKLIYRNNDIIFVNLHSLHKLSKYKGGDSDAVELSRLGTGAWQKLKERTKKRVKDIARDLIRLYAQRKEERGFAFSPDSYLQHELEASFLYEDTPDQERATAEVKADMESDRPMDRLICGDVGFGKTEVAVRAAFKAATDGKQVAILVPTTVLAYQHYQTFRDRLQNFPVRIEYISRARSAKDIKAILHDLAEGRIDIIIGTHRLVSNDIRFHDLGLLVIDEEQKFGVAVKEKLRKLQVNVDTLTMSATPIPRTLQFSLMGARDLSNINTPPPNRYPVATELARFSPDIVREAVNFEMSRNGQVFIVHNRIDNIEEIAGIVQREVPDARVAVGHGRMSPTELERLILDFVHYEYDVLVATTIIENGIDVPNANTIIIDDAHRYGLSELHQLRGRVGRSNRKAFCYLLSPPLSVLSDDSRRRLQAIENFSDLGSGIRIALQDLDIRGAGNVLGAEQSGFIADLGYETYSKVFNEAVSELKADVETTVESDLELSFPEEYVPLDSERILLYRELDNLSTDEELDAFRRRMQDRFGKIPPEGEELIRVPRLRRLGRSLGIEKIVGEQMSFHLVGKE
>BARIO1_P637150383 NP_905876 PG1774 transcription-repair coupling factor [Porphyromonas gingivalis W83]
GLCGSSAALIVKLLH-PVLCIASDMEEAGYLFSDLEQLGGEGSALFFPSYKAIKYGHTDAAQQVL--RAEALAALPLVVSYPEAVAERVVAGDILEKEMHSIRQGDRLDRDFLRDLLLEWGFERTDYVYEPGQFAVRGSLLDVFSFSRELPVRIDFFDDEIESIRLFEVESQLSVGTLSEVVLMPDVAGDVRAE-------------CLLGLFPKN--DQLEQWRDAGYRMLLATASDKQYERVEEILSEL---TLHEGFSDEAIVLLTDHQLFDRVTLSLKELNQFSQGDYIVHIDHGIGRFGGLITTDV-GKRQEVIKLIYRNNDIIFVNLHSLHKLSKYKGGDSDAVELSRLGTGAWQKLKERTKKRVKDIARDLIRLYAQRKEERGFAFSPDSYLQHELEASFLYEDTPDQERATAEVKADMESDRPMDRLICGDVGFGKTEVAVRAAFKAATDGKQVAILVPTTVLAYQHYQTFRDRLQNFPVRIEYISRARSAKDIKAILHDLAEGRIDIIIGTHRLVSNDIRFHDLGLLVIDEEQKFGVAVKEKLRKLQVNVDTLTMSATPIPRTLQFSLMGARDLSNINTPPPNRYPVATELARFSPDIVREAVNFEMSRNGQVFIVHNRIDNIEEIAGIVQREVPDARVAVGHGRMSPTELERLILDFVHYEYDVLVATTIIENGIDVPNANTIIIDDAHRYGLSELHQLRGRVGRSNRKAFCYLLSPPLSVLSDDSRRRLQAIENFSDLGSGIRIALQDLDIRGAGNVLGAEQSGFIADLGYETYSKVFNEAVSELKADVETTVESDLELSFPEEYVPLDSERILLYRELDNLSTDEELDAFRRRMQDRFGKIPPEGEELIRVPRLRRLGRSLGIEKIVGDQMSFHLVGKE
>BARIO1_P643422872 YP_002308899 CFPG_225 transcription-repair coupling factor [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2]
GLLGSAKSLICCCIFKNLLCVLNDLEEAGYFYHDCCQVLGEKDVLFFPSQFRRNIRYGQKNAANEILRIEVLSRLCIIVSYPDALAEKVVDPNKLKSNTLTINIHEKIDVLFVMDVLNSYHFEQVDYVYEPGQYAVRGSIVDVFSFSNEYPYRIDFFGDEIESIRSFNIETQLSKDKLNSISIIS--ANSG-NS-------------TLFSYLPITTGSYLKEKLQESYTLYILSSSEKQIKRIKSIFEDN---TLHAGFIDKTICLFTDHQLFDRIALSLKELQQFQVGDYLVHIDHGIGKFGGLIRTETNGKMQEVVKMTFLNEDTIFTSIHNLHKIFKYKGKDNEPPRLNRLGSRVWENLKEKTKKKVKDIAKDLIQLYSKRREEKGFAFSSDTYLQKELEASFFYENTPDQAKVNMEIKKDMENIRPMDRLVCGDVGFGKTELAIRAAFKAVTDSKQVAVLVPTTLLAFQHYNTFKERLSNFPVTINYISRARTTKDSKTIIKKLKEGTIDILIGTHRIVSKDVQFKDLGLLIIDEEQKFGVEVKEKLKQMKTNIDSLTLTATPIPRTLQFSLMGARDISNISTPPPNRYPIHTELHRFEKNIIREAINFEMSRNGQIFIINNRISNLGDLKDLVKKEIPDGRIAIGHGQMESTKLEQIITDFVNYEYDILISTSIIENGIDIPNANTIIINNAQNFGLSDLHQLRGRVGRGNRKAFCYLLCPPLSNLTPKTVRRLHAIEGFSELGSGIHIAMQDLDIRGAGDILGAEQSGFIADLGYETYQKILSEAIQELKNEMETNLESDLEIYFPTSYVPNDSERILLYRELDTIEEEH-MEQFRIKLQDRFGKIPAKVEELILIVRLRRMAKKSGIEKIVDGKMILYLVKNF
>BARIO1_P640764913 YP_001302014 BDI_0616 putative transcription-repair coupling factor [Parabacteroides distasonis ATCC 8503]
GLNGSGPAMTIASLFTSYVCVLNDQEEAGYFYHDLMQLTASNEVYFFPAYRAIKYGHVDPANEIL--RTEVLSRLFVIVTYPDALAERVVAREVLKENTLKISVGEKLDNMFVSDVLDEYGFEQVDYVYEPGQYALRGSILDVFSFSYEFPYRIDFFGDEVETIRTFDVETQLSKEKLDSIYIVPEMSKNAKDSCIAARD--LAWCKRIGSVWNDDPVESFHKYLDEGYTLYILSDQEKQANRIRMIFEDAVNRTIHEGFADDTICFFTDHQLFDRITLSLKELNQFSQGDYIVHIDHGVGQFGGLVRTEVNGKMQEAIKLIYQNNDIIFVSIHSLHKLSKYKGKEGEPPKLSKLGTGAWEKMKERTKAKVKDIARDLILLYSKRKQETGFAYTPDSFMQHELEASFIYEDTPDQMKATAEVKADMESTRPMDRLICGDVGFGKTEVAIRAAFKAVSDNKQVAVLVPTTVLAFQHYQTFCERLKDFPCKIDYISRARTAAQIKATLKELKEGEVNILIGTHRIVGKDVRFKDLGLLIIDEEQKFGVSVKEKLRQLKVNVDTLTMTATPIPRTLQFSLMGARDLSSITTPPPNRYPVQTEVERFNPDIIREAINFEMSRNGQVFFINNRIQNIYEMEALVRREVPDARVAVGHGQMEPEKLEKIILDFVNHEYDVLIATSIVESGIDVPNANTIIINNAQQFGLSDLHQLRGRVGRSNRKAFCYLLSPPLTSLTQEARRRLQAIENFSELGSGIHIAMQDLDIRGAGNMLGAEQSGFIADLGYETYQKILEEAVDELKSERETYIESDLELMFPPTYIPNDSERISLYRELDNMEEERDILAFTERLKDRFGKIPKEGKELIRIVRLRRMAKKLGMEKVIKGQMSLFLVNNP
>BARIO1_P640762384 YP_001299551 BVU_2270 transcription-repair coupling factor [Bacteroides vulgatus ATCC 8482]
GLHASAAALFVSSFLRTFVFVLGDLEEAGYFYHDLTQVNGDEHILFFPSSYRRAVKYGQKDAANEILRTEVLSRLLCVVTYPEALAEKVVSQEVLMDKTLKLGVGEHVDTEFITEVLAGYGFEHVDYVYEPGQYAVRGSIIDVFSFASEYPYRIDFFGDEVDSIRTFEVENQLSKEKKQSIAIVPELTNAA-DK-------------SFFEFIPRETVTSFTDYQKRGYTLYICTDSEKQAKRLKDIFEEK---TLHEGFTDNVSCFFTDHQIFDRVALTLKELSQFEPGDFVVHIDHGVGRFGGLVRIPNGNTTQEVIKLIYQNEDVVFVSIHSLHKISKYKGKEGETPRLNKLGTGAWEKMKERTKSKIKDIARDLIRLYSQRKQEKGFSYSPDSFMQHELEASFIYEDTPDQLKATQDAKADMESDRPMDRLVCGDVGFGKTEVAIRAAFKAVADNKQVAVLVPTTVLAYQHFQTFSERLKDFPCKVDYLSRARSAKDVSRIVKELADGKINILVGTHKIIGKSVKFKDLGLLIIDEEQKFGVSVKEKLRQMKVNVDTLTMTATPIPRTLQFSLMGARDLSVIQTPPPNRYPIQTEVHTFNEDIITEAINFEMSRNGQVFFVNNRIQNLVELEAMIKRNIPDCRVCIGHGQMEPEKLEKIIFDFVNYDYDVLLATTIIESGIDIPNANTIIINQAQNFGLSDLHQMRGRVGRSNKKAFCYLLAPPLTSLTPEAKRRLQAIENFSDLGSGIHIAMQDLDIRGAGNMLGAEQSGFIADLGYETYQKILAEAVKELKAGDECQVESDLELLFPNEYIPSSSERMLLYRELDGLELDKDLLAFKARLEDRFGKVPPEGLELLRIVPLRRLAKRLGVEKVFLKAGRMTLFFIS
>BARIO1_P637408657 NP_809165 BT0252 transcription-repair coupling factor [Bacteroides thetaiotaomicron VPI-5482]
GLCASSASLFSSVLVKPFVFVLGDLEEAGYFYHDLTQVLGTEKVFFFPSSFRRSIKYGQKDAANEILRTEVLSRLLCIVTYPDALAEKVVSRKELSDKTLKLNVGEKLDTTFITDVLHSYGFEYVDYVYEPGQYAVRGSIIDVFSFASEYPYRIDFFGDEVESIRTFEVESQLSRERKEGVAIVPDLAVTG-DV-------------SFLDFIPKETVGSFKDYLEQGYSLYICSDSTKQTDRIRAIFEDR---TIHEGFVDHTLCIFTDHQLFDRVALSLKELNQFTPGDYVVHTDHGIGRFSGLVRIPNGDTTQEVLKLVFQNEDVVFVSIHSLHKVSKYKGKDGEAPRLNKLGTGAWEKLKDRTKAKIKDIARDLIKLYSQRRQEKGFSYSPDSFLQRELEASFIYEDTPDQSKATMEVKADMESDRPMDRLVCGDVGFGKTEVAIRAAFKAVADNKQVAVLVPTTVLAYQHFQTFRERLKGLPCRVEYLSRARTAAQSKAVLKGLKEGEVSILIGTHRILGKDVQFKDLGLLIIDEEQKFGVSVKEKLRQLKVNVDTLTMTATPIPRTLQFSLMGARDLSVISTPPPNRYPIQTEVHTFNEEVITDAINFEMSRNGQVFFVNNRIANLPELKVMIERHIPDCRVAIGHGQMEPTQLEQIIFDFVNYDYDVLLATTIIESGIDIPNANTIIINQAQNFGLSDLHQMRGRVGRSNKKAFCYLLAPPLSSLTAEGKRRLQAIENFSDLGSGIHIAMQDLDIRGAGNLLGAEQSGFIADLGYETYQKILAEAVHELRNDDECQIESDLELLLPATYVTGSSERMLLYRELDGLTLDKDVDAFRFRLEDRFGPVPPETQELLRIVPLRRLAARLGVEKVFGGRMTLFFVSNA
>BARIO1_P637228646 YP_212577 BF2963 putative transcription-repair coupling factor [Bacteroides fragilis NCTC 9343]
GLYASAASLFASALVEPFVFILGDLEEAGYFYHDLTQVLGTERILFFPSSFRRSVKYGQKDAANEILRTEVLSRLLCIVTYPDALAEKVVSRQELSENTLKLHVGERVDTGFITDVLHSYGFEYVDYVYEPGQYAVRGSIIDVFSFSSEYPYRIDFFGNDVESIRTFEVDSQLSKEKKESIVIVPDLAVTG-KV-------------SFLDFIPKDTTESFKEYLNRGYALYICSDSTKQTDRIKAIFEDR---TLHEGFADDTLCLFTDHQLFDRVALSLKELNQFTPGDYVVHTDHGVGRFSGLVRIPNGDTTQEVMKLVYQNEDVVFVSIHSLHKVSKYKGKEGEAPRLNKLGTGAWEKLKERTKTKIKDIARDLIKLYSQRREEKGFAYSPDSFLQRELEASFIYEDTPDQSKATADVKQDMERDMPMDRLVCGDVGFGKTEVAIRAAFKAVADNKQVAVLVPTTVLAYQHFQTFRDRLKGLPCRVEYLSRARTAAQAKAVIKGLEAGDVNILIGTHRILGKDVKFKDLGLLIIDEEQKFGVSVKEKLRQMKVNVDTLTMTATPIPRTLQFSLMGARDLSVISTPPPNRYPIQTEVHTFSEEVIADAINFEMSRNGQVFLVNNRIANLPELKAMILRHIPDCRIAIGHGQMEPAELEQIIFGFVNYDYDVLIATTIIESGIDIPNANTIIINQAQNFGLSDLHQMRGRVGRSNKKAFCYLLAPPLSSLTPEAKRRLQAIENFSDLGSGIHIAMQDLDIRGAGNMLGAEQSGFIADLGYETYQKILSEAVHELKKGEECQVESDLELLLPANYVTGSSERMLLYRELDGLTLDRDVDAFRSRLEDRFGPIPPETEELLRIVPLRRLAARLGVEKVFLKGGRMTLFFVN
>BARIO1_P637559388 YP_100406 BF3127 transcription-repair coupling factor [Bacteroides fragilis YCH46]
GLYASAASLFASALVEPFVFILGDLEEAGYFYHDLTQVLGTERILFFPSSFRRSVKYGQKDAANEILRTEVLSRLLCIVTYPDALAEKVVSRQELSENTLKLHVGERVDTGFITDVLHSYGFEYVDYVYEPGQYAVRGSIIDVFSFSSEYPYRIDFFGNDVESIRTFEVDSQLSKEKKESIVIVPDLAVTG-KV-------------SFLDFIPKDTTESFKEYLNRGYALYICSDSTKQTDRIKAIFEDR---TLHEGFADDTLCLFTDHQLFDRVALSLKELNQFTPGDYVVHTDHGVGRFSGLVRIPNGDTTQEVMKLVYQNEDVVFVSIHSLHKVSKYKGKEGEAPRLNKLGTGAWEKLKERTKTKIKDIARDLIKLYSQRREEKGFAYSPDSFLQRELEASFIYEDTPDQSKATADVKQDMERDMPMDRLVCGDVGFGKTEVAIRAAFKAVADNKQVAVLVPTTVLAYQHFQTFRDRLKGLPCRVEYLSRARTAAQAKAVIKGLEAGDVNILIGTHRILGKDVKFKDLGLLIIDEEQKFGVSVKEKLRQMKVNVDTLTMTATPIPRTLQFSLMGARDLSVISTPPPNRYPIQTEVHTFSEEVIADAINFEMSRNGQVFLVNNRIANLPELKAMILRHIPDCRIAIGHGQMEPAELEQIIFGFVNYDYDVLIATTIIESGIDIPNANTIIINQAQNFGLSDLHQMRGRVGRSNKKAFCYLLAPPLSSLTPEAKRRLQAIENFSDLGSGIHIAMQDLDIRGAGNMLGAEQSGFIADLGYETYQKILSEAVHELKKGEECQVESDLELLLPANYVTGSSERMLLYRELDGLTLDRDVDAFRSRLEDRFGPIPPETEELLRIVPLRRLAARLGVEKVFLKGGRMTLFFVN
>P637856285 YP_457912 ELI_05115 transcription-repair coupling factor [Erythrobacter litoralis HTCC2594]
SVARGAQPLVMSDLARRAVFIAPDDAAMRAVTDAAHYFAPELEVIEFPAWDCLPYDRASPALSVSAKRLAALHRLQLLVTTVNAALQRVLTPFRIRESVREFAVGTEIGMESLSALLRRQGYTRTDTVVDSGEYAIRGSIVDIFPSGLDQGLRLDFFGDELESLRLFDPSTQMSTEVIKSHLLLPASEALLDEDRLAGMEHWLPLFETLFDHLAEDDLKHLKGLANQGKKPLLTAYSEGSRSRMASILSEL---PIETGFANDQMELLTEQDMLGDSDAFLAELQALTRGDLVVHVEHGIGKYLGLEPIAVGKSQHDCVMLEYRGGDKLYIPVENIDVLSRYG-SSEEAVMLDKLGGEAWQRRRAQLRERIREIAGELMKTAAQRALKKAPVLEAEDSVFNQFVEKFPWEETDDQEAAIADVLRDLESGRPMDRLVCGDVGFGKTEVALRAAFVAAMNGQQVAVVAPTTLLARQHYQNFSERFAGFPLKIGRLSRLVPSGEMSETREGLAKGDVDIVVGTHAILSKSTEFKNLGLVIVDEEQRFGVTHKEKLKQLRADVHMLTLTATPIPRTLQMAMTGLRELSTIQTPPVDRLAVRTYVMEWDDMVMREALLREHHRGGQSFIVVPRIADMESVEEWLRDNVPEVKAVTAHGQMGAAEIEKRMSAFYEGKYEVLLSTTIVESGLDLPSANTIIIHRADIFGLAQLYQLRGRVGRAKLRAYAYLTYAVDTQLSEVAEKRLKVLGDLDSLGAGFQLASHDLDIRGAGNLLGDEQSGHIREVGFELYQSMLEDAIMAAKAGLSPQITVDAPIMIPEEYIPDLAVRMALYRRLNQAQDKAEIESLAAEMIDRFGPLPDATANLIRLIEIKHQAIEANIAKIDVGARGTLVTFHK
>P640444733 YP_497256 Saro_1982 transcription-repair coupling factor [Novosphingobium aromaticivorans DSM 12444]
SVARGAQPLVLADLARRTVFIAPDEAAMRAIVDSAAYFAPDLDVIDFPAWDCLPFDRASPALSVSARRLAALQKLQLLVTTINAALQRVLTPFRIRESTRLLTPGTEIGRESLIALLQRQGYSRTDTVVDAGEYAVRGSVFDIFPSGLDHGLRLDFFGDELETLRLFDPNTQRSVQPVETHLLLPASEALLDEDRLAGMEHWLPLFETLFDHLGENDLKYISALGTRGKKPIIAAYTSGSRSRLASLLAEL---PLEQGFANDDLELLTEQDILGDADAFLAELSALTPGDLVVHMDHGIGRYIGLEAVAVGASPHDCVQLEYAGGDKLYIPVENLDVLSRYG-SDAEGVSLDKLGGEAWQRRKARMRERILEMAGQLMATAAHRALRQGLVLPVDPASYGPFIDRFPWDETEDQERAIDDVLGDMAEGKPMDRLVCGDVGFGKTEVALRAAFVAAMQGVQVAVVAPTTLLARQHYANFVERFNGFPLQIGRLSRLVPAKEASETRAGLADGRVDIVIGTHALLSKSVEFKRLGLVIVDEEQRFGVTHKEKLKELKADVHVLTLTATPIPRTLQMAMSGLRELSTIQTPPVDRLATRTYVMPWDDMVMREALLREHQRGGQSFIVVPRIADMPELEEWLRLNVPEVRFVTAHGQMSPTEVEDRMGAFYEKKYEVLLSTTIVESGIDIPSANTIVIHRADRFGLAQLYQLRGRVGRGKIRAYAYLTVPEDMALSEVAEKRLKVLGDLDSLGAGFQLASHDLDIRGAGNLLGDEQSGHIKEVGFELYQSMLEDAILAAKAGLSPQITLDAPIMIPEDYVPDLAVRMALYRRMNDADGPDAVEALAAEMIDRFGPLPAPTQNLLRLIEVKRQAIAANIAKIDVGPKGALVSFHK
>P637613096 YP_163381 ZMO1646 transcription-repair coupling factor [Zymomonas mobilis mobilis ZM4]
---------------MRLVYIASDEQAAHAIADAAGYFAPELKIISFPAWDCLPYDRASPSLPLSATRIATLHHLELLITTVEAALQRLLTPFRLRQLCQTLAAGVRLDREKLVTLLRAHGYQQSETVSQSGDYAIRGGLVDLWPAGLPYALRLDFFGDEIETLRQFDPTTQRSIAEIDKFNLLPASEALLDAERLAGMEHWLPLFETLWDHLAEEDADYIGALNNQNKRVIIACYSKGSRERLTGLLQDL---PLDHGFIAGDVALLSEQDILGDADAFMAELATLSIGDLVVHSDHGIGCYDGLVSIPVGNAPHDCVALSYQGGDKLYVPVENIDTLSRYG-NASESTVLDKLGGVAWQARKSKMKERIRAIAGQLMATAAQRALRQAPVALADPASYPVFVDRFPYQETEDQEHAISDVIEDLAKGKPMDRLICGDVGFGKTEVALRAAFVAAMSGLQVALVCPTTLLARQHYSNFLERFEGFPLQIGRLSRLVPAKEAKACREALADGTIDIVIGTHAILSKTIDFNRLGLVIVDEEQHFGVVHKERLKALKNDVHQLTLTATPIPRTLQMAMSGLRELSVIQTPPVDRLAVRSYVMPWDPVAIREALLREHYRGGQSFIVVPRISDLADLEKFLSEQVPEIRFVIAHGQMAATEVENRMSAFYDKKFDVLLSTTIVESGLDIPSANTMIVYRADRFGLSQLYQIRGRVGRSKTRAYAYLTTPVNHSISETAEKRLHILSTLDSLGAGFQLASHDLDIRGAGNLLGDEQSGHIKEVGFELYQSMLEDAILVAKSGFSPQITVDAPILIPEDYVPDLGLRMALYRRMNQIKNREEIESFAAEMIDRFGSLPSETKNLLAVIEVKMNCRQAHIGRLDVGPRGALITFHN
>P640581065 YP_001262019 Swit_1518 transcription-repair coupling factor [Sphingomonas wittichii RW1]
RAPMGFQPWLAADLARRLVFVAADDQAMQSLADAARFFAPELTVLTFPAWDCLPYDRASPALRATSERLATLHALVLVATTVNAVTQRVLTPFRIRQLVARLAPGERVDRDRLAAMLQANGYIRTDTVTEQGEYAVRGSLVDLFPAGEPHALRLDFFGDEIESVRQFDATDQRTIGPVDGFTLLPASEALLDEERLAGMDHWLPLFETLFDHLAPEDLEHVEALGKAGKRVVLASYSTGSRERFAGLLAEL---PLDHGFTSGDIALLTEQDMLGDADAFLAELATLSPGDLVVHMDHGIGRYEGLTSIPVAKAPHDCVALTYAGGDKLYVPVENIDVLSRYG-AENEGVQLDKLGGVAWQARKARMKERIREIAGELIKTAAERALRPAEA-IEPDSGYNEFVDRFPYQETEDQDRAIADVIEDLAAGKPMDRLVCGDVGFGKTEVALRAAFVAALGGMQVALICPTTLLARQHYRNFVERFHGMPVNIGHLSRLVSAGEAKRTKDGLADGSIDIVIGTHALLAKGIAFKRLGLVIVDEEQRFGVTHKERLKALKTDVHMLTLTATPIPRTLQMAMSGLRELSVIQTPPVDRLAVRTYVAPWDGVVIREALLREHYRGGQSFLVTPRIKDLPDIEDYLRKEVPEVSYVVAHGQMAAGEVEERMSAFYDKKFDILVSTTIIESGLDIPSANTLIVNRADRFGLAQLYQLRGRVGRSKTRAYAYLTT-GDRGLTETAEKRLHILQNIDTLGAGFQIASHDLDIRGAGNLLGDEQSGHIKEVGFELYQSMLEEAILDAKAGFSPQINVDAPILIPEDYVPDLDLRMGLYRRMNEVETRAEIEAFAAELIDRFGKLPAATQNLLTVIEIKLNCRKACVAKIDTGPRGALVTFHN
>P638010026 YP_616699 Sala_1653 transcription-repair coupling factor [Sphingopyxis alaskensis RB2256]
RAADGFLPLLLADLARRLVYVATDDAAMQAIADAAPFFAPDLTVHRFPAWDCLPYDRAGPSMRVSADRLATLSALELILTTVAAITQRTLTPFRIRQLATTLAAGQRIDRDALAELLVANGFSRVDTVADQGEFAVRGGLLDLFPAGEETGLRVDFFGDEIESIRRFDPADQRSLGAAKALQLLPASETLLDEARQAGMDHWLPLFETLFDHIDPATPDHLSDERRKGRRTIIASYSGGARERLSGLLRDL---PLDHGFASDAISLLTEQDILGEADAFLAELATLSVGDLVVHLDHGIGRYEGLTSIPVGNSPHDCVALTYAGGDKLYVPVENLDVLSRYG-GESDGVALDKLGGEAWQRRKARMKERIREIAGELLATAAQRALRPGEI-LTQDAAYPAFADRFPYQETDDQDRAIGDVLADMASGRPMDRLVCGDVGFGKTEVALRPAFVAAMAGVQVAVVVPTTLLARQHYSNFVDRFKGFPIHIGRLSRLVPAAEAQKTREGLASGQIDIVVGTHAVIAKSVEFKNLGLVIVDEEQRFGVVHKERLKQLKADVHVLTLTATPIPRTLQMAMSGLRELSVIQTPPVDRLAVRTYVAPWDPVVIREALLREHDRGGQSFFVTPRIKDLPDIEEYLRTRVPEIKYVVAHGQMGAQEVEERMSAFYDRKYDVLVSTTIVESGLDIPSANTLIVHRADRFGLAQLYQLRGRVGRSKTRAYAYLTTPDGGAITDTAEKRLKLLGDLDTLGAGFQLASHDLDIRGAGNLVGDEQSGHIREVGFELYQSMLEEAILAAKAELSPVITIDAPILIPEDYVPDLPLRMALYRRLNEAEDRAALDAFAAEMIDRFGPLPPQTANLVQLMEIKANARLAGIAKLDVGTRGALVSFHG
>P639771120 YP_917573 Pden_3811 transcription-repair coupling factor [Paracoccus denitrificans PD1222]
GAPEGMDAALIAREL-PVTHIARDDRRMAAMRAALGFFAPSAAVLEFPAWDTTPYDRVSPAPGVMAARMAVLTALFVLLTTLSAAMQRVPAREALRDAGFSAAVGDRMDEGALRAFLARMGFVQAPTVTEPGDFAVRGGIIDIFPPGDTGPIRLDMFGDVLDGARRFDAETQRSIEKLDRIELAPMSEVILDEAKMAGMEHWLPWFHSLFDYLPGA--DHIRNIQA-SRRVVIASFSEGARERLAGLIADLAVWPLEEGFTSDGLAVISEQDVLGDAENFLRDTTTLTPGDLVVHVEHGIGRYTGLETVKALGVPHDCVALEYAGGDRLYLPVENIELLSRYGHEE---GLLDKLGGGAWQARKARLKERIKLIADKLMRVAAERMLRPAPVLEPEHHEIESFAARFPYAETEDQASAIADVAEDLAAGRPMDRLVVGDVGFGKTEVAMRAAFIAASQGRQVAVVAPTTLLARQHFRTFAERFRGTAINVRPLSRFVSAKDATETRKGLAEGTVDIVVGTHAVLSKQVRFKNLGLLIVDEEQHFGVAHKERLKELRSDIHVLTLTATPIPRTLQLSLTGVRDLSIIGTPPVDRLSIRTYVSEFDGVTIREALLREKYRGGQSFFVVPRLADLPEVEEWLREHVPEVSTIVAHGQLAAGDLDRRMNAFYDRGADVLLATTIVESGLDIPTANTMVVWRADMFGLAQLYQIRGRVGRSKTRAYCYLTTKPRVPLTPQAMRRLKFLGAIDSLGAGFNLASQDLDLRGAGNLLGEEQSGHIKEVGFELYQQMLEETIAKLKSGWAPQLNLGVPVTIPEGYVPDLDVRLGLYRRLAELTTKVELEGFAAELIDRFGPLPREVNTLLLVIRIKAMAKRANIAKLDAGPKGATIQFHG
>P637904680 YP_510264 Jann_2322 transcription-repair coupling factor [Jannaschia sp. CCS1]
GAPEGFDATLVLKEA-PVLHVARDDKRLRAMATALAFFDPSVPVLEFPGWDCLPYDRVSPQAEISAARMATLAALGIVLTTLNAATQYVPPRDLLASSAFVASVGGRVDEDALRAFLVRMGYVQSPTVSEPGDYAVRGGIIDVWPPGEEQPVRLDLFGDTLDGARRFDVVTQRTTEKLQRVELAPVSEVILDEAKAQGMEHWLPFYHTLFDYLPGATIDHIKVMRE-DAAVVVASWSDGARERLEGLLEDLTIWPLEQGFLLKLICVISEQDVLGDADNYLTEAQSLSPGDLIVHVDHGVGRYKGLETVTAAGAPHECIALEYAGGDRLFLPVENIELLSRYGHDD---GLLDKLGGGAWQAKKARLKERIRLIADKLIRIAAERELRKAPIFEPPGDMWEAFNARFPYEETDDQLTAIADVLDDMTLGRPMDRLVVGDVGFGKTEVAMRAAFVAAASGMQVAVVAPTTLLARQHAKTFQDRFRGFPITVRQLSRFVGTKEAEQTRKGLSDGSVDIVIGTHAILAKSVRIQNLGLMIIDEEQRFGVTHKERLKEMRSDVHVLTLSATPIPRTLQMSLSGVRDLSMIGTPPVDRLAIRTYVSEFDTVTIREALLREHYRGGQTFYVVPRIQDLPEIEEFLKDHVPEVTYITAHGQMAAGELDDRMVAFYDGKYDVLLATTIVESGIDIPTANTMVIHRADMFGLAQLYQIRGRVGRAKTRAYAYLTTKPRGKLTPSAEKRLRVLGSLDSLGAGFTIASQDLDIRGAGNIVGEEQSGHVKEVGFELYQSMLEEAIAKIRSGWSPTINLGVPVLIPEAYVPDLDVRLGLYRRLSQLETKVDLEGFAAELIDRFGKLPKEVNTLLLVVRIKAMCKRAHIAKLDAGPKGVTIQFHN
>P641267476 YP_001532904 Dshi_1561 transcription-repair coupling factor [Dinoroseobacter shibae DFL 12]
GVPEGFDAQIVLREASQAVFVARDDKRMAAMAAALAVTAPQIPVLRFPGWDCLPYDRSSPNPEISATRMATLAALFVLLTTLSAVTQRVPARATLAEASFSAQVGGRIDEAALRQFLTRMGFVQAPTVTEPGDYAIRGGIIDIFPPGQSGPVRLDLFGDVLDGARRFDAATQRTTEKLDAIELAPVSEIILDPAKHAGMEHWLPFFHTLLDYVPEASLTHITEKRKTS-QVVIASWSEGARERLRGLLEDW---ALDEGFEGPDLTVISEQDVLGDAENFLQEATSLSAGDLVVHVDHGVGAFKGLETVTAMGAPHECLLLEYAGGDRLYLPVENIELLSRFG---QEIGMLDKLGGGAWQAKKAKLKERIREMADKLIRIAAERALRRAPMLEPPPDMWEAFSARFPYTETDDQLSAIEDVVHDLAAGTPMDRLICGDVGFGKTEVAMRAAFIAALSGVQVAVIAPTTLLARQHYKSFADRFRGFPLEVRPLSRFVPAKAAADTRKGLAAGSVDIVVGTHALLAKGVRFHNLGLLIIDEEQRFGVGHKERLKELRSDVHVLTLTATPIPRTLQLSLSGVRDLSIIGTPPVDRLSIRTYVSEFDPVTLREALLREHYRGGQSFFVVPRIKDIPEIEAFLRDQVPEVSFVVAHGQMAAGELDDRMNAFYDGKYDVLLATTIVESGLDIPTANTMIIHRADMFGLSQLYQIRGRVGRAKTRAYAYLTTKPRMKLTPAAEKRLRVLGSLDSLGAGFTLASQDLDIRGAGNLLGEAQSGQFREVGFELYQSMLEEAIGKIKSGWAPQINLGVPVLIPEAYVPDLDVRLGLYRRLSQLTTKVELEGFAAELIDRFGKLPKEVNTLLLIVRIKAMCKKAGIAKLDGGPKGATVQFHN
>P640070982 YP_352861 RSP_2850 transcription-repair coupling factor (helicase) [Rhodobacter sphaeroides 2.4.1]
GAPEGYDARLVAKEL-PVIHVARDDKRLEAMRTALAVMAPRAVVLELPAWDCLPYDRVSPNPEISARRMATLAALGVLLTTLNAATQRIPAREVLRAASFSARVGDRVDEGRLRSYLARMGFSLTDTVTEPGDYAIRGGIVDIYPPGVAGPVRLDFFGDVLDGARRFDPETQRTVEKLDLVELAPVSEVMLDEGKHQGMEHWLPFFHTLFDYLPEA--DHVRSLRE-DRQVVIASWSEGARERLKGLLEELMVWALEQGFTAPGLAVISEQDVLGDAENFLREHDTLTPGDLVVHVEHGVGRYMGLETLRVQPPPHDYLHLVYAEDAKLYLPVENIELLSRYGHEE---GLLDKLGGGAWQAKKARLKERIREIAERLMRIAAERHLRHAPILEAPHSLWEAFSARFPYQETDDQLSAIADVVKDLESGSPMDRLVVGDVGFGKTEVAMRAAFVAALAGMQVAVICPTTLLARQHFRSFAERFRGFPMKVHQLSRFVSAREAAETRSGLADGTVDICIGTHALLAKGVKLKNLGLLIIDEEQHFGVSHKERLKEMRSEVHVLTLTATPIPRTLQLSLTGVRDLSIIATPPVDRLAIRTYVSEFDTVTIREALLRERYRGGQSFFVVPRLSDLPDMEAFLRDHVPEVSYVVAHGQLAAGELDERMNAFYDGKFDVLLATTIVESGLDIPTANTMIVHRADMFGLSQLYQIRGRVGRAKTRAYCYLTTKPRAPLTPQAIKRLRLLASLDSLGAGFNLASHDLDLRGAGNLLGEEQSGHIKEVGYELYQQMLEETIQKIRSGWAPQINLGVPVLIPEEFVPDLDVRLGLYRRLSGLTTKVELEGFAAELIDRFGPLPREVNTLLLVVRIKAMCKRAGISRLETGPRGATVQFHN
>P640112031 YP_001043325 Rsph17029_1443 transcription-repair coupling factor [Rhodobacter sphaeroides ATCC 17029]
GAPEGYDARLVAKEL-PVIHVARDDKRLEAMRTALAVMAPRAVVLELPAWDCLPYDRVSPNPEISARRMATLAALFVLLTTLNAATQRIPAREVLRAASFSARVGDRVDEERLRSYLARMGFSLTDTVTEPGDYAIRGGIVDIYPPGVAGPVRLDFFGDVLDGARRFDPETQRTVEKLDLVELAPVSEVMLDEGKHQGMEHWLPFFHTLFDYLPEA--GALVDHRE-DRQVVIASWSEGARERLKGLLEEW---ALEQGFTAPGLAVISEQDVLGDAENFLREHDTLTPGDLVVHVEHGVGRYMGLETLRVQPPPHDYLHLVYAEDAKLYLPVENIELLSRYGHEE---GLLDKLGGGAWQAKKARLKERIREIAERLMRIAAERHLRHAPILEAPHSLWEAFSARFPYQETDDQLSAIADVVKDLESGSPMDRLVVGDVGFGKTEVAMRAAFVAALAGMQVAVICPTTLLARQHFRSFAERFRGFPMKVRQLSRFVSAKEAAETRAGLADGTVDICIGTHALLAKGVKLKNLGLLIIDEEQHFGVSHKERLKEMRSEVHVLTLTATPIPRTLQLSLTGVRDLSIIATPPVDRLAIRTYVSEFDTVTIREALLRERYRGGQSFFVVPRLSDLPDMEAFLRDHVPEVSYVVAHGQLAAGELDERMNAFYDGKFDVLLATTIVESGLDIPTANTMIVHRADMFGLSQLYQIRGRVGRAKTRAYCYLTTKPRAPLTPQAIKRLRLLASLDSLGAGFNLASHDLDLRGAGNLLGEEQSGHIKEVGYELYQQMLEETIQKIRSGWAPQINLGVPVLIPEEFVPDLDVRLGLYRRLSGLTTKVELEGFAAELIDRFGPLPREVNTLLLVVRIKAMCKRAGISRLETGPRGATVQFHN
>P639636108 YP_682965 RD1_2746 transcription-repair coupling factor [Roseobacter denitrificans OCh 114]
GVPEGYDARVLLDEVAPVMHIARDDKRLAALQAALRFMAPDMPVVVFPGWDCLPYDRISPNADISAQRMATLAALFILLTTLNAASQKIPARDLLKDAAFSARVGSRIDEKALRNFLVRMGFVQSPTVTEPGDYAVRGGIIDIFPPGDMGPVRLDLFGDVLDGARRFDSATQRTTEKLDLVELAPVSEIILDEAKHQGAEHWLPFFHTLFDYLPQA--GALADHIKEGGPVLIASYSEGARERLTGLIEDLAVWALEHGFEAPGLTVISEQDVLGDAENFLTETESLSPGDLIVHVDHGIGRYKGLEVV-TAGAAHECILLEYAESSKLYLPVENIELLSKYGHEE---GLLDRLGGGAWQAKKARLKERIREMADKLIRVAAERALRKAPVLEPPPGMWDAFSARFPYTETDDQLRAIADVIDDLTSGNPMDRLVCGDVGFGKTEVAMRAAFVAAMSGVQVALIAPTTLLARQHYKSFAERFRGFPINVRQLSRFVPTKEANETREGLSRGTVDIVIGTHALLAQGIRFQNLGLLIIDEEQHFGVTHKERLKQLRTDIHVLTLTATPIPRTLQLSLTGVRDLSIIGTPPVDRLAIRTYVSEFDTVTLREALLREHYRGGQSFYVVPRISDLPEIEAFLTEQLPELTYVVAHGQMAAGELDDRMNAFYDGKFDILLATTIVESGLDIPTANTMIVHRADMFGLAQLYQIRGRVGRSKTRAYAYLTTKPRARLTATAEKRLRVLSSLDTLGAGFTLASQDLDIRGAGNLLGEEQSGQMRDVGFELYQSMLEEAIAKIRTGWAPQINLGVPVLIPEDYVPDLDVRLGLYRRLSSLTTKVELEGFAAELIDRFGKLPREVNTLMLVVRIKAMCKRAGIAKLDGGPKGATIQFHN
>P637289553 YP_167304 SPO2074 transcription-repair coupling factor [Silicibacter pomeroyi DSS-3]
GAPEGFDARLLNEVA-PVLHVARDDKRLEAMRAALAFFAPDLPVFVFPSWDCLPYDRVSPNADVSAARMATLAALFVLLTTLNAATQRVPARDLLREAAFSAQVGRRVDEQALRQFLVRMGFSQSPTVMEPGDYAIRGGIIDIYPPGDSGPVRLDFFGDVLDGARRFDPATQRTTEKLDLIELAPVSEVILDEAKHQGVEHWLPFFHTLFDYLPAA--DHLKVRMA-DGPVLIASYSEGARERLTGLIEDLAVWALEHGFEAPGLTVISEQDVLGDAENFLTETQSLTPGDLVVHVDHGIGRYRGLEVITAAGAAHECIALDYAEEARLYLPVENIELLSKYGHEE---GLLDRLGGGAWQAKKAKLKERIREMADRLIRVAAERALRKAPVMDPPPHAWEDFSARFPYQETDDQLRAIGDVMDDLHSGMPMDRLICGDVGFGKTEVAMRAAFVAAMSGLQVAVIAPTTLLARQHAASFRDRFRGFPLEVRQLSRFISAKEAQQTREGLARGTVDIVIGTHALLAKGIRFQNLGLLIIDEEQHFGVGHKERLKQLRSDVHVLTLTATPIPRTLQLSLTGVRDLSIIGTPPIDRLAIRTYVSEFDAVTVREALLREHYRGGQSFYVVPRITDLPDIEAFLKEQLPELTYVVAHGQMAAGELDDRMNAFYDGKYDVLLATTIVESGLDIPTANTMVVHRADMFGLAQLYQIRGRVGRSKARAYAYLTTKPRARLTPAAEKRLRVLASLDTLGAGFSLASQDLDIRGAGNLLGEEQSGQMPDVGYELYQSMLEEAIAKIRSGWAPQINLGVPVLIPEEYVPDLDVRLGLYRRLSSLTTKVELEGFAAELIDRFGKLPKEVNTLLLVVRIKAMCKRAGIAKLDGGPKGATIQFHN
>P638006659 YP_613344 TM1040_1349 transcription-repair coupling factor [Silicibacter sp. TM1040]
GAPEGYDARLLKEMA-PVLHIARDDKRLEAMRAALRFFAPEIPVVIFPGWDCLPYDRVSPNADISAARMATLAALFILLTTLNAAMQRVPAREVLKEAAFSARVNSRIDEDALRKFLVRMGFSQSPTVMEPGDYAIRGGIIDIFPPGESGPVRLDLFGDTLDGARRFDPATQRTTEKLEVVELAPVSEVILDEAKHQGMEHWLPFFHTLFDYMPDA--DHIKARMT-KGPVVVASYSEGARERLSGLIEDLAVWALEHGFEAPDMTVISEQDVLGDAENFLTEAQSLSPGDLVVHVDHGIGRYIGLEVVT-AGAAHECLLLEYAEESKLYLPVENIELLSKYGHDE---GLLDKLGGGAWQAKKARLKERIREMADRLIRIAAERALRKAPAMDPPPHAWEEFSARFPYQETDDQLRAIEDVISDLNSGQPMDRLICGDVGFGKTEVAMRAAFVAAMSGLQVAIVAPTTLLARQHAAAFKERFRGFPLEVRQLSRFVTSKEASQTREGMAKGTVDIVVGTHALLAKNIRFQNLGLLIIDEEQHFGVAHKERLKQLRSDIHVLTLTATPIPRTLQLSLTGVRDLSIIGTPPVDRLAIRTYVTEFDAITIREALLREHYRGGQSFYVVPRISDLPEIEAFLQEQLPELSYVVANGQMAAGELDDRMNAFYDGKYDILLATTIVESGLDIPTANTMVVHRADMFGLAQLYQIRGRVGRSKTRAYAYLTTKPRQRLTDSAEKRLRVLGSLDTLGAGFTLASQDLDIRGAGNLLGEEQSGQMRDVGYELYQSMLEEAIAKIKSGWAPQINLGVPVLIPEAYVPDLDVRLGLYRRLSSLTTKVELEGFAAELIDRFGKLPKEVNTLMLVVRIKAMCKKAGIAKLDGGPKGATIQFHN
>P638144547 YP_760685 HNE_1985 transcription-repair coupling factor [Hyphomonas neptunium ATCC 15444]
--------------------MARDDRIAQAARRMALFAAPRLEQVDLPGWDVLPYDRISPTPAVAARRCAGLARILLVITTAGALVQRSAPVETLKKASLSIRAGETVKANDLTEYLAFNGYVRSGTVREQGEYAVRGGIIDIFPPTAAEPFRLDFFGDVLETIRTFDTETQRSTGKAEAVTFAPVSEILFNDNRRQGVESWLPLFHTLFDYVGPGALAHARALYASGKPVVFAAWSAGSADRLINVLSDV---PLEEGFNLPDVAMISEADVLGDSASFITDATSLTPGDLVVHIDHGVGKYIGLKTLEVTGAPHDCLQLEYAGGDMIFIPVENIDLISRYG-SEESESQLDRLGGAGWQTRKAKAKKRILEMAAELMQIAAARELKRAEAVQSGQGLYEEFAARFPYEETDDQLSAIEDVLGDLSSGKPMDRLVCGDVGFGKTEVALRAAFVAAMSGKQVAVIAPTTLLARQHFKTFEERFAGWPLKVRALSRFVGAREAAETRDGLASGSVDVVVGTHAVLSKDMNFKRLGLMIVDEEQRFGVKHKERLKELKSDVHVLTLSATPIPRTLQMALTGIRDLSIIATPPVDRLSVRTYITEEDTVTLREALLREKYRGGQAFFVAPRITDLDKLENFLRTHVPEVSFIVAHGQMAAGELEDIMTAFYEGKYDVLLSTTIVESGLDIPRANTLIIHRADMFGLAQLYQLRGRVGRSKLRAYAYFTTPKDKVVTESAEKRLKVLQSLDSLGAGFQLASHDLDMRGAGNLLGDQQSGQVKEVGVELYQSMLEDAVKALQAGWSPQINLGVAVLIPEDYVDDLNVRLSLYRRLSDIITAQDREAFAAELIDRFGPLPEPTRQLLDVTAIKVSCKALGIAKLDAGEKGALFTFRS
>P638140968 YP_756715 Mmar10_1485 transcription-repair coupling factor [Maricaulis maris MCS10]
GAPEGLDALVFADTARVNVFIARDDSRAAAFVAALQFFAPDIELLRLPAWDCQPYDRISPSPRVAARRAATLAKLTLVVTTVNAMAQRCPPRSVLQDSGLSIRPGASVDVDVLVRHFTANGYSRAATVMEPGDFAVRGGVVDVYPPGATEPVRLDFFGDTLESIRAFDPETQRSLRQIKSIEFTPVSEVLLDEDRPAGVEHWMPLFYTPFDYLPDQSLAHIKSLSASGKTVMLASWTGGASERLASVLGDL---PLERGFETDTLAVLSEQDILGDSADIIVEAGSLSPGDLVIHADHGLGRFIGLKTLPVQDAPHDCIELEYSGQAKLYLPVENIELLSRYG-AESETAQLDKLGGVAWQARKAKAKKRLRDMADQLIKIAAERLARKAEPIETSSGAFDEFCSTFPYPETDDQLNAIDDVLTDLGRGRPMDRLICGDVGFGKTEVALRAAFVVALSGQQVAIVAPTTLLARQHFKTFSDRFRGWPVKVRLLSRLVTAKEAKATRDELAAGQVEIVIGTHALLAKTVKFRDLGLLVVDEEQHFGVKHKERLKELRSDVHVLTLTATPIPRTLQLALTGIRDLSIIATPPVDRLAVRTYVAPFDPVSVREALLREKYRGGQAFFVVPRITDLEETTRFLRESVPEVSFVAAHGQMAASQLEDIMTAFYEGRYDVLLSTTIVESGIDIPTANTLIIHRADRFGLSQLYQLRGRVGRSKTRAYAYLTTPMRQKITESAEKRLKVMQSLDSLGAGFTLASHDLDLRGGGNLLGEEQSGHIRDVGVELYQSMLEEAVASLRSGWSPQINAGGAVLIPDHYVPDLDVRLQLYRRLSSLDNKTEREGYAAELIDRFGPLPKEVETLLRVVAVKALCKKAGIEKVDAGPKGAVIHLRN
>P642759516 YP_002130459 PHZ_c1619 transcription-repair coupling factor [Phenylobacterium zucineum HLK1]
GAPEGFDALVMADVVKLSVFVARDGARLSAFADAFRFFAQNVEVLTLPAWDCLPYDRIGPSPGVAAQRMATLSRLALLVTSVPSLLQRVPPVKAVKRASYSAKVGNSVEIADLERYFAVNGYARASTVSDRGEFAIRGGVIDVFPPTAEEPVRLDLFGDTLESIRAFDPETQRSTKQLKEVSLLPVSEALLDADRRAGMEHYLPLFYTLFDYLPKDALDHAKKLSSDGKRVLFASWSEGSSDRLGHMLADL---PLDHGFETDSLAVISETDILGDAANFLAEASALTPGDLVVHIDHGIGRYDGLKTLDVQGAPHDTLELQYGGEAKLYLPVENIDLLTRYG-ADAENVQLDRLGGAAWQARKARAKERLREMADGLIRIAAERATKATDAVEPPQGVFDEFCARFPYEETEDQLMAIGDVLEDLAGGKPMDRLVCGDVGFGKTEVALRAAFVVAMSGQQVAVVAPTTLLARQHYKTFTERFEGWPVKVRRLSRLVTAKEAAETREGLAKGEVEIVVGTHAILSKQVSFKNLGLVIVDEEQHFGVKHKEKLKELRADVHLLTLTATPIPRTLQMSLSGIREMSIIATPPVDRLAVRTYITPWDPVVIREALLREKYRGGQAYFVAPRINDLPELERFLREQVPEVKFVVGHGQMAPTQLEEVMSAFYDGQYDVLLSTTIVESGLDIPTANTLIIHRADMFGLAQLYQLRGRVGRSKSRAYAYLTTPAEKQITLSAEKRLKVLQSLDNLGAGFQLASHDLDIRGGGNLLGEEQSGHIREIGVELYQQMLEDAVNELKAGWSPQINTGAAVLLPEDYIPDLNVRLAIYRRISDAERVDDREALAAELIDRFGPLPPEADQLLKVVAIKGLCRQANVAKIDVGPKGAVVTFRN
>P643620164 YP_002517293 CCNA_01920 transcription-repair coupling factor [Caulobacter crescentus NA1000]
GAPEGFDALVMADIARLTAFVARDTARAGAFIDALKFFAPEIEAVLFPSWDCLPYDRIGPSSGVSATRMATLSRLAILVIAAPALLQRVPTKEVLLRASYAAKVGANVDIKDLERYFAVNGYTRASTVSERGEFAIRGGVIDVYPPAAEEPVRLDLFGDTLESIRAFDPETQRSTKQLKEIDLLPVSEALLDADRRAGLEHWLPLFYTLFDYLPAGALDHAKALAAQGKRVLFASWSEGSSERLGTMLADL---PLDHGFETDSLAVISETDILGDAANFLAEASALTPGDLVVHIDHGIGRYEGLKTLDVQGAPHDCLDLLYGGEAKLYLPVENIDLLTRYGAADAENVQLDKLGGAAWQGRKAKAKERLRVMAEGLIQIAAARQLKTVEETDPPSGVFDEFCARFPYEETDDQLSAIHDVLEDLSSGKPMDRLICGDVGFGKTEVALRAAFVVAMSGKQVAIVCPTTLLARQHYKTFKDRFQGWPVKVTRLSRLVTGKEAAETREGLANGQFEIVVGTHAILSKQVSFKDLGLVIVDEEQHFGVKHKEKLKELRADVHMLTLTATPIPRTLQMALSGIREMSIIATPPVDRLAVRTYISPFDPVTLREALLREKYRGGQSYYVVPRIKDLEDIEKFLRTQVPEVKFVVGHGQMAATQLEDVMTAFYEGQYDVLLATTIVESGLDIPSANTLIVHRADMFGLAQLYQIRGRVGRSKARAYAYLTTPVEKSLTPSAEKRLQVLQSLDSLGAGFQLASHDLDQRGGGNLLGDEQSGHIKEIGVELYQQMLEDAVAELRQGWSPQINTGAAVMIPDDYVPDLNVRLSLYRRLSEAEQAADREALAAEMIDRFGPLPPETDSLLKVVAIKGLCREANVAKIDVGPKGAVASFRG
>P641563110 YP_001684244 Caul_2619 transcription-repair coupling factor [Caulobacter sp. K31]
GAPEGFDALVMADIARLTAFVARDTARASAFIDALKFFAPEIEAVLFPSWDCLPYDRIGPSAGVAATRMATLHRLAILVTAAPALLQRVPEKTVLLRASYGAKVGNVVDVADLERYFAINGYVRASTVSERGEFAIRGGVIDVYPPAAEEPVRLDLFGDTLESIRAFDPETQRSTKQLREIQLLPVSEALLDKERRAGLEHWLPLFYTLFDYLPDGALDHATTLAGQGKRVLFASWSEGSSERLGMMLADL---PLDNGFETETLVVISETDILGDAANFLAEASALTPGDLVVHIDHGIGRYEGLKTLDVQGAPHDCLDLLYGGEAKLYLPVENIDLLTRYG-TDAENVQLDKLGGAAWQGRKSKAKERLRVMAEGLIQIAAARQLKSVEETDPPHGVFDEFCARFPYEETDDQLSAIADVLEDLGSGKPMDRLICGDVGFGKTEVALRAAFVVAMSGKQVAIVCPTTLLARQHYKTFKDRFQGWPVKVTRLSRLVTGKEAAETREGLANGQLEIVVGTHAILSKQVSFKDLGLVIVDEEQHFGVKHKEKLKELRADVHMLTLTATPIPRTLQMALSGIREMSIIATPPVDRLAVRTYISPFDPVTLREALLREKYRGGQAYYVVPRIKDLEEIEKFLRTQVPEVKYVVGHGQMAPTQLEDVMTAFYEGQYDVLLATTIVESGLDIPSANTLIVHRADMFGLAQLYQIRGRVGRSKARAYAYLTTPNEKQITLSAEKRLKVLQSLDSLGAGFQLASHDLDQRGGGNLLGDEQSGHIKEIGVELYQQMLEDAVAELRQGWSPQINTGAAVMIPDDYVPDLNVRLSLYRRLSEAEKAADREALAAELIDRFGPLPPETDSLLKVVAIKGLCREANVAKIDVGPKGAVASFRN
>P640553671 YP_001234877 Acry_1754 transcription-repair coupling factor [Acidiphilium cryptum JF-5]
GAPEGFDADLIARRAATVLHIARDDARLARLEDALAFFAPAAEIIRFPAWDCLPYDRVSPNPAIVADRVAALARLRIVLTTVNAAVQRTPPRARFADASRTIAPGGAAPPDDLARFLEQRGYHRVGTVMEPGDFAVRGGIFDVWPSGEPAPARIDLFGDTVDTLRRFDPGTQRSGEALPSLTFRPASELPLDADRHPGMEHFAPLFCTVFDYAPGAAILLAARWREAGRRVVLAAWSAGSRDRLAALLRDL---GLERGYVADDLAIVAEQDLLGQADQFIADATEIAEGDLVVHQDHGIGRYDGLVTLSVEGAPHDCLRILYDGDQKLFLPVENIDMLSRFG-SETAGVGLDRLGGASWQARKAKARNRIRDMAAGLIRIAAERKLHDAAILAADDGAFAEFCARFPYTETEDQARAIADVMEDLAAGKPMDRLVCGDVGFGKTEVALRAAFIAAMSGAQVAVVVPTTLLARQHYRLFSERFAGLPIRVEQLSRLVSAKDTAKVKAGLADGTVNIVVGTHALLSKTIAFADLALLIVDEEQHFGVAHKERLKQLKADIHVLTLTATPIPRTLQLALTGVRDLSLITTPPVDRLAVRTFIMPWDKLVIREAIARERFRGGQIFCVVPHIEDIDRMRERLAEIAPDLRTATAHGRLPPTEIERVMTEFSEGKHDVLLATNIVESGLDMPAVNTILIWRADLFGLGQLYQLRGRVGRGKQRGYAYLTWPASHTLAASSQKRLEVMQTLDTLGAGFTLASHDLDLRGAGNLLGDEQSGHIREVGIELYQQMLEDAVAELRGGWTPNISLGLPVLIPEAYVADLPVRLGLYRRIGGLATDAESEALAAELVDRFGPMPEEVENLLATVALKRACRAVGVEKLEAGPKGMVVAFRG
>P638128609 YP_744657 GbCGDNIH1_0836 transcription-repair coupling factor [Granulobacter bethesdensis CGDNIH1]
GAPEGWDAVLINRRRQVIVHVARDDARVARLAEALRFFAPKVEVLTFPAWDCLPYDRVSPNPELVSERVATLARLRIVLTTFNALVQRVPPRGQFHGTGLDLGVGDLADPDEMARFLDQHGYVRAGTVMEAGEYALRGGIVDIFPSGEAEPIRLDLFGDQIESIRRFDPTTQRSGEAVERLVLRPVSEIPLDKDRHAGMEHWAPLFHTLLDYVPGAVVDASQQWAKDGRRLIVAAWSRGSRERLMHLLREL---GLERGFLAEKIGVVSEQDLLGEADQFIAEATEIAEGDLVVHQDHGIGRYDGLVTLTVSGAPHDCLRLLYDGNDKLFLPVENIEMLSRFG-AETAGVALDKLGGVSWQSRKAKMKQRIRDMAGELIRIAAERKVREAPMLTPQEGAWDEFCARFPFAETEDQARAIADVLEDMASGRPMDRLICGDVGFGKTEIALRAAFVAAMTGAQVAVVVPTTLLARQHYRTFAKRFEGLPVTVAQLSRMVTAKEASQVRAGLADGSVNIVVGTHALLAKTVQFADLGLVIVDEEQHFGVSHKEKLKALRADVHVLTLTATPIPRTLQLSLSGVREMSIIATPPVDRLAVRTFIMPFDSVVVREAIQRERFRGGQVFCVCPRLEDLGRMAERLAEIVPEAKLITAHGQLAPTELERVMTEFGDGKHDILLATNIVESGLDMPAVNTIIIHRADMFGLGQLYQLRGRVGRGKQRGYAYLTWPQAHRLSVAAEKRLEVMQTLDTLGAGFTLASHDLDIRGAGNLLGDEQSGHIREVGIELYQQMLEDAVADMR--WTPNIGLGLPVLIPETYVRDLPVRLGLYRRIGALASDAETEAMAAELVDRFGPMPEEVENLLQVVSLKRQCRLAGVEKLEAGPKGMVVQFRG
>P641335834 YP_001602131 GDI1886 putatve transcription-repair coupling factor [Gluconacetobacter diazotrophicus PAl 5]
----------MARRARPVLHVARDDAGMARIGELLSFVAPNAEILRFPSWDCLPYDRVSPNPAIVAERVATLTRLRIVLTTVGGLVQRVAPRAAFRGQSLTLAAGDSLDQALLIDLLVAAGYNRTDTVMEPGEFATRGGIFDIFPSGEAEPVRLDLFGDEVENIRRFDPATQRSSDRLDRFVMRPVADFTLDQARHAGLEHWLPLFHTLVDYLPGVSITQVRQWAETGRRAYVSAWTRGSRERIATLLREL---GLERGFIADNLAFVSEQDLLGEADQFIAEASEIAEGDLVVHQDYGIGRYDGLETIGVGTAPHDCLRLIYDGNEKLFLPVENIELLSRFG-SDQAGVALDKLGGASWQNRKARMKQRIRDMAGELIRTAALRALREAPSMTPAEGMWDEFCARFPFVETEDQSRAIADVLEDMGSGRPMDRLVCGDVGFGKTEVALRAAFVAALSGAQVAVVVPTTLLARQHFRTFSARFSGLPITVAQLSRMVTPKEATAVRKGLADGTINIVIGTHALLAKGVQFADLELLIIDEEQHFGVAHKEKLKALREDVHVLTLSATPLPRTLQLALTGVREMSLIATPPTDRLAVRTFIMPFDSVVIREAIQRERFRGGQIFCVVPRIEDLDRMAARLQDIVPDARLVQAHGRLTPTELERVMTEFSDGKYDILLSTNIVESGLDMPAVNTLIIHRADMFGLGQLYQLRGRVGRGKQRGYAYLTWPQTHVLSAAAEKRLEVMQTLDTLGAGFTLASHDLDLRGAGNLLGDEQSGHIREVGIELYQQMLEDAVAELRVEWTPNIILGLPVLIPETYVPDLPVRLGLYRRIAGLANDAEIEAMEAELVDRFGTMPDEVRNLLDVVAIKRLCREAGVERLEAGPKGMVIQFRG
>P637622811 YP_190508 GOX0055 Transcription-repair coupling factor [Gluconobacter oxydans 621H]
GVPDGSVAFLLRQRLAPLLHVARDDAAVAALADMLAWLMPEVEVLRLPAWDCLPYDRVSPNPVLIAERAGTLCRL-IVLTTVHSLIQRVPPRSAFRGQSISVKTGESLDQAMLIELLIANGYTRTDTVMEAGEFATRGGIFDLFLAGESDPIRLDLFGDEVENIRAFDVGTQRSTETLKCFELRPVSEFSLGPDRYPGLEHYLPLFHTLLDYLPGGAVQQVKTWAEAGRRTYVTAWSRGSRERISHLLAELLTLGLERGFVSDRLCFVSEQDLLGEGEQFISQVGEIAEGDLVVHSDYGIGRYVGLETVVE-GVAHDYLSILYDGEQRLLLPVENIELLSRFGS--EQVVQLDKLGGTAWQARKAKMKSRIRVMAGELIKTAAARALKDAPTLAPAEGLWDEFCARFPFVETEDQSRAIADVLEDMSAGRPMDRLVCGDVGFGKTEVALRAAFVAALSGMQVAVVVPTTLLARQHFRSFSARFEGFPVNVAQLSRLITPKEATKVREGMADGTVDIVVGTHALLAKTVSFERLGLLIIDEEQHFGVAHKERLKALREDVHVLTLSATPLPRTLQLSLSGVREMSLIATPPTDRLAVRTFITPFDSVMIREAIQRERFRGGQIFCVVPRLADMDRMAERLTEIVPDAKTVQAHGRLTPTELERVMTEFADGKYDILLSTNIVESGLDMPSVNTIIIHRADMFGLGQLYQLRGRVGRGKQRGYAYMTWPQTRPLSPSSEKRLEVMQTLDSLGAGFTLASHDLDLRGAGNLLGDEQSGHIKEVGIELYQQMLEDAVIDMRREWTPNIILGLPVLIPEAYVPDLPVRLGLYRRIASLTNEAEVEAMRAELVDRFGSLPPEVGNLLDVVLIKRLCREAGVERLETGPKGMVIQFRR
>P643412149 YP_002297483 RC1_1262 transcription-repair coupling factor [Rhodospirillum centenum SW]
GAPEGHDARLLAGLAAGLLHVATDDARAARLAEAVSFFDPGIEVILFPAWDCLPYDRVSPNGDIVARRIDALTRLLLLVTTVNAALHKVPPRLAFRNASFRARVGDRINLPELQRFLANNGYTKAQTVREPGEFAVRGGIVDLFPPGTAEPLRLDLFGDDLDGVRAFDPMTQLTTEKRDGFVLKPMSEVFLDEMKYAGMEHWLPLFHTLFDYMPDAPVEHVGALLADGRRVVVAGYSTGARDRLRSVLKEL---ALDHGFTAPGLAVITEQDILGDAANFIAEASGLNPGDLVVHIDHGIGRYDGLETLDV-GAPHDCLRLVYEGGDKLYVPVENIEVLSRYG-SEDSAGQLDRLGGAGWQSRKARVKKRLKDMAAALLRIAAERALRTAPPVAVPDGAWDEFCARFPYAETDDQLHAIEDVLGDLSSGRPMDRLVCGDVGFGKTEVALRAAFLAVMNGMQVAVVVPTTLLARQHYRTFEQRFAGLPVRLGQLSRLATAKETAQTKAGLADGTVDIVVGTHALLSKSVDFKRLGMVIVDEEQHFGVKQKERLKELRADIHVLTLTATPIPRTLQLALSGVRELSLIATPPVDRLAVRTFVLPYDPVVIREAILREHYRGGQSFYVCPRIEDLERVRLQLEELVPEVKVVVAHGQMPASQLEEVMTAFDEHKYDVLLATNIIESGLDIPSANTLVVHRADLFGLAQLYQVRGRVGRAKVRGYAYLTYQPRTVLSATAQQRLHVIETLDSLGAGFQLASHDMDIRGAGNLLGEEQSGHIREVGVELYQQMLEEAVADARSGWSPQINLGMPVLIPESYVPDLNVRLTLYRRVSDLTDRQEIDAFAAELIDRFGPLPEEVDNLLRLVEIKRLCKEAGVANLDAGPKGAVVGFRN
>P637821077 YP_421828 amb2465 Transcription-repair coupling factor [Magnetospirillum magneticum AMB-1]
ELAAGGCAQG------GILHVARDEGRMARVAEALAFFAPDLQVLEFPGWDCVPYDRVSPHVDMVARRIDTLARLFVVLTTVPGLAQRVPPREALASATLDARKGSRLSMDKLIGFLSKNGYVRADTVMEPGEYAVRGGIVDLYPPGSAEPLRLDFFGDEIDSVRSFDPMSQRTTGPMAGFVCRPVSEVGLDDAKFNGMEHWLPLFHTLFAYVPEA--EHAEEQAKAGRRVVIAAWTQGSRDRLAGVLRDVAVLGLDHGFATPDLAVITEQDILGDGAQFIAEASALAEGDLVVHVEHGIGRYDGLVALEVSGAPHDCLRVLYDGGDKLFVPVENIDVLTRFGS--EQAVSLDKLGGTAWQARKAKLKKRIRDIADQLIGIAAQRKMRQGEALVPAEGLYDEFCARFPFAETEDQMRAIEDSIADLASGKPMDRLICGDVGFGKTEVAMRVAFVAALQGLQVAVVVPTTLLARQHYRTFKERFSGLPVRVEQLSRLVTAKTASEVKAGVADGSVDVVVGTHALLAKGIGFKRLGLLIIDEEQHFGVAHKERLKQLKADVHVLTLTATPIPRTLQMALSGVKEMSVIATPPIDRLAVRTFVLPYDPVVLRESILRERYRGGQVFYVCPRLADIDRVAERLAKLVPEVKTAVAHGRLAPADLEEVMVAFGEKQYDVLLSTNIIESGIDMPSVNTLIIHRADMFGLGQLYQLRGRVGRGKTRGYAYFTLPNDKVLSKAAEKRLQVMQALDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIREVGVELYQQLLEEAVAAAKGGWSPQIAVGTPVLIPETYVADLSVRLSLYRRIGSLADQAEIEALAAELIDRFGKLPPEVENLLEVVAIKALCKLAGIDKVDSGPKGAVVSLRG
>P637825822 YP_426813 Rru_A1726 Transcription-repair coupling factor [Rhodospirillum rubrum ATCC 11170]
GLPEGFDALVLGELAAAVLHVARDDVRLARLAETIAFFHPAVEILEFPAWDCVPYDRVSPNVEIVARRLETLSRLRLVLTTASAILQRVPPRQILERGVFSARVGGRLDLGKLLDHLARHGYGRSEQVMEPGEYAVRGGIVDIFPPGAPEPLRLDLFGDELDSLRSFDPVSQRTTGQRDALILRPMSEVVLDKEPFMGMEHWLPLFHTLFAYVPDG--DHAQALRAAGKRVVLTAATMGARERMTGVLREVVLTILDRGFETPDLAVISEADVLGDGDKFIPDISALSEGDLVVHVDHGIGQYEGLETLTA-GAPHDCLRVVYADNNRLYVPVENIEVLSRYGS--EQAVQLDKLGGVAWQARKAKLKQRIRDMAEQLIGVAAARQLKVGEVISPPEGLYDEFAARFPYAETDDQLRAIADTLDDLAAGRPMDRLICGDVGFGKTEVALRAAFATAMSGRQVAVVVPTTLLARQHHLTFKERFAGLPVRIGQLSRLVTARDTKAVKEEMAAGTLDIVVGTHALLAKTVRFRDLGLLIVDEEQHFGVAHKERLKQMRADVHVLTLTATPIPRTLQLALTGVREMSIIATPPVDRLAVRTFVLPFDPVVVREAILRERFRGGQCFYVCPRLTDIDKVMERLTTLVPDIRAVVAHGQMAPSRLEEVMTAFADGQYDVLVATNIVESGLDIPRANTIIIHRADMFGLAQLYQLRGRVGRARARGYAYLTLPPGRTVSKTAAKRLDVMQTLDTLGAGFTLASHDLDIRGAGNLLGDEQSGHIKEVGIELYQQLLEEAVAAAREGWSPQIQLGTPILIPDSYVKDLGLRLGLYRRIAGVTDEAEIDEMAAEMVDRFGPLPDEVENLLKVVTIKVLCRRANAEKVDAGPKGAVLSFRD
>P639841984 YP_989090 BARBAKC583_0798 transcription-repair coupling factor [Bartonella bacilliformis KC583]
GIIDGVEAFALAQLSTPLVYVVRDETKIAHLQQALSFIEPNLPVLHFPAWDCLPYDRVSPAITITARRLSVLAHIAIIVTTANAIIQRLPPCAMIDNQILHVRVGQRVDMDHLIHYLERNNFERVGIVRDVGEFAVRGGIIDIFSPSEVEPSRLDFFGDTLETIRVFDTETQRTIKNRTDFFLQSMSEVILTPERVAGMEHWLPFFYNFFDYCGNFPIDHISSLQSAGKKILLACWSEGSMDRLLQVLDEI---TIDHGFESEDFVIITEQDILGDNANFISEISTLNSGDFVVHIDHGVGQFIGLKTIMTAGILRDCLEISYAGGDRLFLPVENVELLSRYG-SEDTDVTLDKLGGVAWQARKTRFKKHLLQIAGQLICIAAERAMRSAPILTPPVSLFDEFVARFPYEETEDQMSAIDAVLDDLEAGKPMDRLICGDVGFGKTEVAIRSAFVAALNGYQTAVVVPTTLLSRQHYKTFIARFQGLPVKIGHVSRLVKAAELTKVKKGISDGTIDIVVGTHALLSGSVNFSRLGLLIIDEEQHFGVKHKEHLKELKSDIHVLTLSATPIPRTLGLALSGVRELSLITTPPIDRMAVRTFISPFDALVIRETLLREYYRGGQSFYVCPRISDLSYVEEYLKKHVPELKFVIAHGQMPAGQLDDIMNAFYDGKYDVLLSTTIIESGLDIPTANTLIVHRAEMFGLSALYQLRGRVGRSKQRAYALFTFPSNKVLTTAAQRRLKILQSLDTLGAGFQLASHDMDIRGSGNFLGEEQSGHIKEVGFELYQKMLEEAVSELKEGWSPQISVGTTVLIPENFVPDLSLRMSLYRRLMALENLEEINELGAELIDRFGPLPLEVQHLLKIVYIKALCRKARVEKLDVGPKGVIIQFRN
>P641343059 YP_001609562 Btr_1197 transcription repair coupling factor [Bartonella tribocorum CIP 105476]
GVTDGFEAFALAQLSSPLIYVVRDGTKISHLRQVLNFIEPNLPVLQFPAWDCLPYDRVSPGIAIMARRLSALARMAIILTTANAIMQKLPPREMIEAQLIHAHVGQRHNMGHFIQFLETNGFERVTVVRDVGEFAVRGGILDIFSPMDVEPLRLDFFGDTLESIRVFDPESQRTTRQKTELLLQAMSEVVLTPERFAGMEHWLPFFYTFFDHCGNLPLDHIASLRAAGKKVLLACWSEGSLNRLVQVLDEI---MIEHGFEAEDLAIIAEQDILGDNTNFISEISALNSGDIVVHIDHGIGQFVGLKTITTTGILRDCLEIKYAGGDLLFLPVENIELLSRYG-SEGTEVTLDKLGGVAWQARKARLKKHLLEMAGQLIRIAAERVTRAAPALLPPVGLFDEFVACFPYEETEDQINAIDAVLDDLASGKPMDRLICGDVGFGKTEVAIRSAFVAALNGYQVAVVVPTTLLSRQHYKTFISRFQGLPVKIGHASRLVKTKEIAQVKKGISDGTIDIVIGTHALLSGAINFLRLGLLIIDEEQHFGVKHKERLKELKSDIHVLTLSATPIPRTLGLALSGVRELSLITTPPVDRMAVRTFISPFDALVIRETLLREYYRGGQSFYVCPRISDLAFVEEYLKTHVPELKFVIAHGQMPAGQLDDIMNAFYDGQYDVLLSTTIIESGLDIPTANTLIVHRAEMFGLSALYQLRGRVGRSKQRAYALFTFPSGKVLTPAADRRLKVLQSLDTLGAGFQLASHDMDIRGSGNFLGEEQSGHIKEVGFELYQKMLEEAVAELKDGWSPQISLGTTVMIPESFVPDLSLRMGLYRRLTEFEDLNQINEFAAELIDRFGPLPLEVQHILKVFHIKTLCRKAHVEKLDAGPKGIVIQFRN
>P637510632 YP_033679 BH08750 Transcription repair coupling factor [Bartonella henselae Houston-1]
GITDGFEAFALAQLSLPLVYVVRDGTKLTHLQQVLNFIEPNLPVFQFPAWDCLPYDRVSPGIAVMARRLSTLAHIAIILTTANAIMQKLPPHEMIETQVIYARIGQRTSMGHLIQFLEANGFERVTVVRDVGEFAVRGGILDIFSSVDAEPLRLDFFGDTLETIRVFDSETQRTTHKRTEFFLHSMSEVILTPERFAGMEHWLPFFYTFFDHCGNLPFHHIASLHVAKKKVLLAGWSEGSLARLLQVLDEI---RIEHGFEVEDFAIITEQDILGDNKNFISEIAALNSGDIVVHIDHGIGQFVGLKTITTAGILRDCLEIKYAGGDLLFLPVENIELLSRYG-SEGTDVTLDKLGGVAWQARKTRLKKHLLEMANQLIRIAAERATRSAPALLPPIGPFDEFVACFPYEETEDQMDAIDAVLDDLASGKPMDRLICGDVGFGKTEVAIRSAFVAALNGYQVAVVVPTTLLSRQHYKTFVSRFQGLPVKIGHASRLVKTKELAQVKKGLSDGTIDIVIGTHALLSDAVNFLRLGLLIIDEEQHFGVKHKERLKELKSDIHVLTLSATPIPRTLGLALSGVRELSLITTPPIDRMAVRTFIAPFDSLVIRETLLREYYRGGQSFYVCPRVSDLGFVEEYLKAYVPELKFVVAHGQMPAGQLDDIMNAFYDGQYDVLLSTTIIESGLDIPTANTLIVHRAEMFGLAALYQLRGRVGRSKQRAYALFTFPSGKVLTPAADRRLKVLQSLDSLGAGFQLASHDMDIRGSGNFLGEEQSGHIKEVGFELYQKMLEDAVVELKDGWSPQISLGITVMIPESFVPDLSLRMGLYRRLTELDDLEQIDEFAAELIDRFGSLPLEVQHLLKVFYIKILCRKAHVEKLDTGPKGVVIQFRN
>P637509141 YP_032239 BQ05840 Transcription repair coupling factor [Bartonella quintana Toulouse]
GVTDGFEAFALAKLSSPLIYVVHDGTKIAHLQQVLNFIEPNLPVLEFPAWDCLPYDRVSPGIAVTARRLSALAHIAIILTTANAIIQKLPPRELIETQMIYARVGQRTSMGRLIQFLESNGFERVTVVRDVGEFAVRGGILDIFSPVDVEPLRLDFFGNTLETIRVFDSETQRTINKKTEFLLHSMSEVVLTPERFAGMEHWLPFFYSFFDHCGNLPLHHIASLRAMGKKVLLACWSEGSLNRLVQVLDEV---MIEHGFETEDFVVIAEQDILGDNTNFISEIAALNSGDIVVHIDHGIGQFVGLKTITATGILRDCLEIKYAGGDRLFLPIENIELLSRYG-SEGTDVTLDKLGGVAWQARKTRLKKHLLEMAGQLIHIAAERATRSAPAFVPPIGPFDEFVACFPYEETEDQKDAIDAVLEDLASGKPMDRLICGDVGFGKTEVAIRSAFVAALNGYQVAVVVPTTLLSRQHYKTFLSRFQGLPVKIAHASRLVKTKEFTQVKKGVSDGTIDIVVGTHALLSGAVNFLRLGLLIIDEEQHFGVKHKERLKELKSDIHVLTLSATPIPRTLGLALSGVRELSLITTPPIDRMAVRTFIAPFDTLVIRETLLREYYRGGQSFYVCPRISDLAFVEEYLKTHVPELKFVVAHGQMPAGQLDNIMNAFYDGQYDVLLSTTIIESGLDIPTANTLIVHRAEIFGLSALYQLRGRVGRSKQRAYALFTFPSGKVLTAAADRRLKVLQSLNTLGSGFQLASHDMDIRGSGNFLGEEQSGHIKEVGFELYQKMLEEAVAELKDGWSPQISLGTTVMIPESFVPDLSLRMGLYRRLTELDDLEQIDEFAAELIDRFGPLPLEVQHLLKVFYIKTLCRKAHVEKLDTGPKGIIVQFRN
>P643651503 YP_002549692 Avi_2366 transcription-repair coupling factor [Agrobacterium vitis S4]
PVPDGMDAFLVAELARPVAYLLSDSSRMNDIEQMLGFCAPEIPVLTLPAWDCLPYDRVSPSADISARRLSALSGLGIVLVTANAMLQKLAPADVIESLSFSARPGNQVKMDDVAARLSRNGFERVDTVREVGEFAVRGGILDVFVPGSEEPVRLDFFGDTLESIRSFDPASQRTIGQVRSLDLNPMSEVTLTPERYAGMEHWMPLFHTVFDYLTDFRVKYISDKRASGSKVLITGWSEGSLDRLLQVLNEL---ALEGGFEAGELVVVGEQDILGDAADFISEVAGLDEGSIVVHAEHGIGRFIGLRTIQAAGSQHACLELQYADEAKLFLPVENIELLSRYG-SEGSEAQLDKLGGGAWQMRKAKLKKRLLDMAGGLIRIAAERMMRSAPVLATTEGFYDEFAARFPYEETEDQMNAIEAVRGDLAAGRPMDRLICGDVGFGKTEVALRAAFVAAMNGIQVAVVVPTTLLARQHFKTFSERFRGLPIRIQQASRLVGTKELNLVKKEVAEGKTDIVVGTHALLGSGIKFANLGLLVIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLAMTGVRELSLITTPPVDRMAVRTFISPFDPLVIRETLMREHYRGGQSFYVCPRLADLADIKAFLESDVPELKVAIAHGQMAAGELEDIMNAFYEGRYDVLLSTTIVESGLDVPTANTLIVHRADMFGLAQLYQIRGRVGRSKVRAFALLTLPVNKVLTTSAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVAEVKGEWSPQIQVGTSVMIPDEYVPDLHLRLGLYRRLGELTELNDIDGFGAELIDRFGPLPAEVQNLLKVVYVKALCRKANVEKLEAGPKGVVVQFRN
>P643825672 YP_002825994 NGR_c14690 putative transcription-repair coupling factor [Rhizobium sp. NGR234 (ANU265)]
PVPSGAEALILADLARPVAYFLSDGQRIADLEQVLGFVAPDIPVLTLPGWDCLPYDRVSPSADTSARRLAALSALAIVLVTVNAALQKISPQDVIESLAFSARPGNQVRMDDLAAQLERNGFERVPTVREVGEFAVRGGILDVYVPGSGEPLRLDFFGDTLETIRSFDPASQRTTGQVRSLDLNPMSEVSLTPERYAGMEHWLPLFYTIFDYLEGFRIKHIAERRAKGAKVVISGWTEGSLDRLLQVLAEL---SLESGFETGDLVVIGEQDILGDGADFIAEVTGLDEGSYVVHAEHGIGRFVGLRTIEAAGAPHDCLELVYAEDAKLFLPVENIELLSRYG-SEGTDAILDKLGGVAWQARKAKLKKRLLDMAGGLIRIAAERHTRHAPALVAQDGVYDEFAARFPYEETEDQLNSIEAVRDDLGGGRPMDRLVCGDVGFGKTEVALRAAFIAAMNGVQVAVVVPTTLLARQHFKTFSDRFRGLPIRIQQASRLVGSKDLALTKKEVADGKTDIVVGTHALLGSSIKFANLGLLIIDEEQHFGVKHKERLKELKTDVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFISPFDALVIRETLMREHYRGGQSFYVCPRLSDLSEIHDFLKSDVPELKVAVAHGQMPATELEDIMNAFYEGRYDVLLSTTIVESGLDVPTANTLVVHRADMFGLAQLYQLRGRVGRSKVRAFALFTLPVNKTLTGPAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGGEQSGHIKEVGFELYQQMLEEAVAELK-GWSPQISVGTPVMIPEHYVPDLNLRLGLYRRLGELTDLKEIDGFGAELIDRFGPLPIEVQHLLKIVYIKALCRTANVEKLDAGPKGVVVQFR-
>P640790341 YP_001327080 Smed_1399 transcription-repair coupling factor [Sinorhizobium medicae WSM419]
PVPTGAEALVLAELARPVAYILSDGQKVSDLEQVLGFVAPDIPVLTLPGWDCLPYDRVSPSADTSARRLAALSALAIVLVTVNAVLQRISPQDVIESLAFTARPGNQIRMDDLAARLERNGFERVPTVREMGEFAVRGGILDVYVPGSGEPLRLDFFGDTLEAIRAFDPASQRTIGQVRSLDLNPMSEVSLTPERYAGMEHWLPLFYTVFDYLNGFRIKHIAEKRAKGARVLVSGWTEGSLDRLLQVLGEL---SLEAGFESGDLVVIGEQDILGDGSDFIAEVTGLDEGSYVVHAEHGIGRFVGLQTIEAAGAPHDCLELVYADDAKLFLPVENIELLSRYG-SEGTDAVLDKLGGVAWQARKAKLKKRLLDMAGGLIRIAAERHTRHAPVLAAQDGVYDEFAARFPYDETEDQLNSIDAVRDDLGSGRPMDRLVCGDVGFGKTEVALRAAFIAAMNGVQVAVVVPTTLLARQHFRTFSERFRGLPIRIQQASRLVGSKELALTKKEVAEGKTDIVVGTHALLGSSIKFANLGLLIIDEEQHFGVKHKERLKELKTDVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFISPFDALVIRETLMREHYRGGQSFYVCPRVSDLPEIHDFLKSDVPELKVAVAHGQMPATELEDIMNAFYEGRYDVLLSTTIVESGLDVPTANTLIVHRADMFGLAQLYQLRGRVGRSKVRAFSLFTLPVNKTLTGPAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVAELK-GWSPQISVGTPVMIPEDYVPDLNLRLALYRRLGELTDLKEIDGFGAELIDRFGPLPTEVQHLLKIVYVKSLCRTANVEKLDAGPKGVVVQFR-
>P637182458 NP_385757 SMc04450 PROBABLE TRANSCRIPTION-REPAIR COUPLING FACTOR (TRCF) PROTEIN [Sinorhizobium meliloti 1021]
PVPTGAEALVLAELARPVAYILSDGQKVADLEQVLGFVAPDIPVLTLPGWDCLPYDRVSPSADTSARRLAALSALAIVLVTINAALQRISPQDVIESLAFTARPGNQIRMDDLAARLERNGFERVPTVREMGEFAVRGGILDVYVPGSGEPLRLDFFGDTLEAIRSFDPASQRTIGQVRSLDLNPMSEVSLTPERYAGMEHWLPLFYTVFDYLDGFRIKHIAEKRAKGAKVIVSGWTEGSLDRLLQVLAEL---SLEAGFETGDLVVIGEQDILGDGADFIAEVTGLDEGSYVVHAEHGIGRFVGLRTIEAAGAPHDCLELVYADDAKLFLPVENIELLSRYG-SEGTDAVLDKLGGVAWQARKAKLKKRLLDMAGGLIRIAAERHTRHAPVLAAQDGVYDEFAARFPYDETEDQLNSIDAVRDDLGRGRPMDRLVCGDVGFGKTEVALRAAFIAAMNGVQVAVVVPTTLLARQHFKTFSDRFRGLPIRIQQASRLVGSKDLALTKKEVAEGKTDIVVGTHALLGSSIKFANLGLLIIDEEQHFGVKHKERLKELKTDVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFISPFDALVIRETLMREHYRGGQSFYVCPRVSDLPEIHDFLKSDVPELKVAVAHGQMPATELEDIMNAFYEGRYDVLLSTTIVESGLDVPTANTLIVHRADMFGLAQLYQLRGRVGRSKVRAFALFTLPVNKTLTGPAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVAELK-GWSPQISVGTPVMIPEEYVPDLNLRLGLYRRLGELTDLKEIDGFGAELIDRFGPLPTEVQHLLKIVYVKSLCRTANVEKLDAGPKGVVVQFR-
>P639291887 NP_354763 AGR_C_3270 hypothetical protein [Agrobacterium tumefaciens C58 (Cereon)]
NVPSGMEALLLADMARSVAYVMSDGQRVADLEQILGFVAPDIPVLTLPAWDCLPYDRVSPSADTSARRLAALAGLAVVLVTVNAMLQKMAPRDVIESLGFSARPGNQIRMEDIAARLERNGFDRVATVREVGEFAVRGGILDVFVPGTEEPVRLDFFGDTLESIRTFDPASQRTIAQARSLDLNPMSEVTLTPDRYAGMEHWLPLFYTAFDYLKGFRIKHIAERRAKGWKVLITGWSEGSLDRLLQVLNEL---SLEAGFETGTLAVIGEQDILGDGADFIAEVAGLDEGSLVVHAEHGIGRFVGLQTIEAAGAPRACLELHYADDAKLFLPVENIDLLSRYG-SDAAEATLDKLGGGAWQMRKAKLKKRLLDMADELIRIAAARLVRHAPALIAPDGLYDEFAARFPYDETEDQLNAIEAVRDDLGAGRPMDRLICGDVGFGKTEVALRAAFLAAMNGVQVAVVVPTTLLARQHFRTFSERFRGLPIRVQQASRLVGSKELALTKKEVAEGKTDIVVGTHALLGAGISFANLGLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLAMTGVRELSLITTPPVDRMAVRTFISPFDPLVIRETLMREHYRGGQSFYVCPRLADLADIHAFLQSDVPELKVAVAHGQMAAGELEDIMNAFYDGKYDVLLSTTIVESGLDVPTANTLIVHRADMFGLAQLYQLRGRVGRSKVRAFALFTLPVNKVLTTMAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVAEVK-GWSPQISVGTSVMIPEDYVPDLHLRMGLYRRLGELADISEIDGFGAEMIDRFGPLPKEVQHLLKIVYIKSLCRTANVEKVDAGPKGVVVQFR-
>P639297266 NP_532461 Atu1778 transcription-repair coupling factor [Agrobacterium tumefaciens C58 (Dupont)]
NVPSGMEALLLADMA-SVAYVMSDGQRVADLEQILGFVAPDIPVLTLPAWDCLPYDRVSPSADTSARRLAALAGLAVVLVTVNAMLQKMAPRDVIESLGFSARPGNQIRMEDIAARLERNGFDRVATVREVGEFAVRGGILDVFVPGTEEPVRLDFFGDTLESIRTFDPASQRTIAQARSLDLNPMSEVTLTPDRYAGMEHWLPLFYTAFDYLKGF--KHIAERRAKGWKVLITGWSEGSLDRLLQVLNEL---SLEAGFETGTLAVIGEQDILGDGADFIAEVAGLDEGSLVVHAEHGIGRFVGLQTIE-AGAPRACLELHYADDAKLFLPVENIDLLSRYGS--DAAATLDKLGGGAWQMRKAKLKKRLLDMADELIRIAAARLVRHAPALIAPDGLYDEFAARFPYDETEDQLNAIEAVRDDLGAGRPMDRLICGDVGFGKTEVALRAAFLAAMNGVQVAVVVPTTLLARQHFRTFSERFRGLPIRVQQASRLVGSKELALTKKEVAEGKTDIVVGTHALLGAGISFANLGLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLAMTGVRELSLITTPPVDRMAVRTFISPFDPLVIRETLMREHYRGGQSFYVCPRLADLADIHAFLQSDVPELKVAVAHGQMAAGELEDIMNAFYDGKYDVLLSTTIVESGLDVPTANTLIVHRADMFGLAQLYQLRGRVGRSKVRAFALFTLPVNKVLTTMAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVAEVK-GWSPQISVGTSVMIPEDYVPDLHLRMGLYRRLGELADISEIDGFGAEMIDRFGPLPKEVQHLLKIVYIKSLCRTANVEKVDAGPKGVVVQFR-
>P643646248 YP_002544505 Arad_2364 transcription-repair coupling factor [Agrobacterium radiobacter K84]
HVPAGMEPFLLAELA-PVAYVMSDGQHMADVEQMLGFLAPEIPVLTLPAWDCLPYDRVSPSSDTSARRLAALSGLAIVLVTVNAMLQKVAPQDVIESLAFSARPGNQVRMDDIAGRLERNGFDRVATVREVGEYAVRGGILDVFVPGTEEPVRLDFFGDTLESIRSFDPASQRTTGQVRSLDLNPMSEVTLTPDRYAGMEHWLPLFYTVFDYLRGF--KHIAERRAAGDKIMITAWTEGSLDRLLQVLAEL---SLEAGFEVGDLVVIGEQDILGDAADFISEVAGLDEGSIVVHAEHGIGRFVGLRTIEAAGAPHACLELQYADDAKLFLPVENIDLLSRYGGE-GTEAQLDKLGGGAWQMRKAKLKKRLLDMAGALIRIAAERLTRHAPVLSTPDGLYDEFAARFPYDETEDQMNAIEAVRDDLGAGRPMDRLVCGDVGFGKTEVALRAAFVAAMNGAQVAVVVPTTLLARQHFKTFTDRFRGLPIRIQQASRLVGAKDLALTKKEVSEGKTDIVVGTHALLGAGIQFANLGLLVIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLAMTGVRELSLITTPPVDRMAVRTFISPFDSLVIRETLMREHYRGGQSFYVCPRLADLADIHAFLQSDVPELKVAVAHGQMPAGELEDIMNAFYEGRYDVLLSTTIVESGLDVPTANTLIVHRADMFGLAQLYQLRGRVGRSKVRAFALFTLPVNKVLTTTAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVAEVKGVWSPQISVGTPVMIPDAYVPDLHLRMALYRRLGEITEIKEIDGFGAEMIDRFGPMPIEVQHLLKIVYIKSLCRVANVEKLDAGPKGVVVQFRN
>P639648267 YP_767976 RL2386 putative transcription-repair coupling factor [Rhizobium leguminosarum bv. viciae 3841]
NVPAGLETLLLAELARPVAYVMSDGHRMADLEQMLGFVAPDIPVLTLPAWDCLPYDRVSPSADTSARRLAALGGLAIVLVTANAMLQKVAPQDVIESLSFSARPGNQLRMDDLAGRLERNGFERVATVREVGEYAVRGGILDVFVPGSEEPVRLDFFGDTLESIRSFDPASQRTIGQVRSLDLNPMSEVTLTPDRYPGMEHWLPLFYTVFDYLSGFRIKHIADRRAAGAKVLVTAWTEGSLERLLQVLNEL---SLEAGFEAGDLVVIGEQDILGDAADFISEVAGLDEGSIVVHAEHGIGRFIGLRTIEAAGAPHACLELQYADEAKLFLPVENIDLLSRYG-GEGTEAQLDKLGGGAWQMRKAKLKKRLLDMADALIRIAAERLTRHAPMLTTPEGLYDEFAARFPYDETEDQENAIEAVRSDLGAGRPMDRLVCGDVGFGKTEVALRAAFVAAMNGAQVAIVVPTTLLSRQHFKTFSDRFRGLPVRIQQASRLVGAKELALTKKEVAEGKTDIVVGTHALLGAGIKFANLGLLVIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLAMTGVRELSLITTPPVDRMAVRTFISPFDSLVIRETLMREHYRGGQSFYVCPRLADLEDVHAFLQSDVPELKVAVAHGQMPAGELEDIMNAFYEGRYDVLLSTTIVESGLDVPTANTLIVHRADMFGLAQLYQLRGRVGRSKVRAFALFTLPVNKVLTATAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVAEVKGVWSPQISVGTTVMIPEGYVPDLHLRMALYRRLGEITELKEIDGFGAEMIDRFGPMPIEVQHLLKIVYIKSLCRTANVEKLDAGPKGVVVQFRN
>P640439120 YP_469606 RHE_CH02095 transcription-repair coupling factor (TRCF) protein [Rhizobium etli CFN 42]
NVPTGLEPLLLAELARPVAYVMSDGHRMADLEQMLGFVAPDIPVLTLPAWDCLPYDRVSPSADTSARRLAALGGLAIVLVTANAMLQKVAPHDVIESLSFSARPGNQLRMDDLAGRLERNGFDRVATVREVGEYAVRGGILDVFVPGSEEPVRLDFFGDTLESIRSFDPASQRTTGQVRSLDLNPMSEVTLTPDRYPGMEHWLPLFYTVFDYLSGFRVKHIADRRAAGAKVLVTAWTEGSLERLLQVLNEL---NLESGFEAGELVVIGEQDILGDAADFISEVAGLDEGSIVVHAEHGIGRFIGLKTIEAAGAPHACLELQYADEAKLFLPVENIDLLSRYG-GEGTDAQLDKLGGGAWQMRKAKLKKRLLDMADALIRIAAERLTRHAPVLTTPDGLYDEFAARFPYDETEDQDNAIEAVRSDLGAGRPMDRLVCGDVGFGKTEVALRAAFVAAMNGVQVAVVVPTTLLARQHFKTFSERFRGLPVRVQQASRLVGAKDLALTKKEVADGKTDIVVGTHALLGAGIKFANLGLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLAMTGVRELSLITTPPVDRMAVRTFISPFDSLVIRETLMREHYRGGQSFYVCPRLADLADVHAFLQSDVPELKVAVAHGQMPAGELEDIMNAFYEGRYDVLLSTTIVESGLDVPTANTLIVHRADMFGLAQLYQLRGRVGRSKVRAFALFTLPVNKVLTATAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVAEVKGVWSPQISVGTTVMIPENYVPDLHLRMALYRRLGEITDLKEIDGFGAEMIDRFGPMPIEVQHLLKIVYIKSLCRTANVEKLDAGPKGVVVQFRN
>P643396453 YP_002281243 Rleg2_1730 transcription-repair coupling factor [Rhizobium leguminosarum bv. trifolii WSM2304]
NVPVGLEPLLLAELARPVAYVISDGHRMADLEQMLGFVAPDIPVLTLPAWDCLPYDRVSPSADTSARRLAALGGLAIVLVTANAMLQKVAPQDVIESLSFSARPGNQLRMDDLAGRLERNGFDRVATVREVGEYAVRGGILDVFVPGSEEPVRLDFFGDTLESIRSFDPASQRTTGQVRSLDLNPMSEVTLTPDRYPGMEHWLPLFYTVFDYLSGFRIKHIADRRAAGAKVLVTAWTEGSLERLLQVLNEL---NLESGFEAGDLVVIGEQDILGDAADFIAEVAGLDEGSIVVHAEHGIGRFIGLKTIEAAGAPHACLELQYADEAKLFLPVENIDLLSRYG-GEGTEAQLDKLGGGAWQMRKAKLKKRLLDMADALIRIAAERLTRHAPMLTTPDGLYDEFAARFPYDETEDQDNAIDAVRSDLGAGRPMDRLVCGDVGFGKTEVALRAAFVAAMNGVQVAIVVPTTLLSRQHFKTFSERFRGLPVRIQQASRLVGAKELALTKKEVAEGKTDIVVGTHALLGAGIKFANLGLLVIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLAMTGVRELSLITTPPVDRMAVRTFISPFDSLVIRETLMREHYRGGQSFYVCPRLADLADVHAFLQSDVPELKVAVAHGQMPAGELEDIMNAFYEGRYDVLLSTTIVESGLDVPTANTLIVHRADMFGLAQLYQLRGRVGRSKVRAFALFTLPVNKVLTATADRRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVAEVKGVWSPQISVGTTVMIPEGYVPDLHLRMALYRRLGEITELKEIDGFGAEMIDRFGPMPIEVQHLLKIVYIKSLCRTANVEKLDAGPKGVVVQFRN
>P642699073 YP_001978281 RHECIAT_CH0002145 transcription-repair coupling factor (TRCF) protein [Rhizobium etli CIAT 652]
NVPAGLEPLLLAELA-PVAYVMSDGHRMADLEQMLGFVAPDIPVLTLPAWDCLPYDRVSPSADTSARRLAALGGLAIVLVTANAMLQKVAPHDVIESLSFSARPGNQLRMDDLAGRLERNGFDRVATVREVGEYAVRGGILDVFVPGSEEPVRLDFFGDTLESIRSFDPASQRTTGQGRSLDLNPMSEVTLTPDRYPGMEHWLPFFYTVFDYLSGF--DVVVKHRAGGAKVLVTAWTEGSLERLLQVLNEL---NLESGFEAGDLVVIGEQDILGDAADFIAEVAGLDEGSIVVHAEHGIGRFIGLKTIE-AGAPHACLELQYADEAKLFLPVENIDLLSRYGGE-GTDAQLDKLGGGAWQMRKAKLKKRLLDMADALIRIAAERLTRHAPVLTTPDGLYDEFSARFPYDETEDQDNAIDAVRSDLGAGRPMDRLVCGDVGFGKTEVALRAAFVAAMNGVQVAVVVPTTLLARQHFKTFSERFRGLPVRVQQASRLVGAKDLALTKKEVAEGKTDIVVGTHALLGAGIKFANLGLLVIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLAMTGVRELSLITTPPVDRMAVRTFISPFDSLVIRETLMREHYRGGQSFYVCPRLADLADVHAFLQSDVPELKVAVAHGQMPAGELEDIMNAFYEGRYDVLLSTTIVESGLDVPTANTLIVHRADMFGLAQLYQLRGRVGRSKVRAFALFTLPVNKVLTATADRRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVAEVK-GWSPQISVGTTVMIPEGYVPDLHLRMALYRRLGEITELKEIDGFGAEMIDRFGPMPIEVQHLLKIVYIKSLCRTANVEKLDAGPKGVVVQFR-
>P640836323 YP_001372175 Oant_3640 transcription-repair coupling factor [Ochrobactrum anthropi ATCC 49188]
GVADGYEAFCLIRLAEPIMYIVRDGQRIADLEQVLSFVAPDMPVLHLPAWDCLPYDRVSPGADASARRLAALSALAIILTTANAVLQKLPPQAAIAEQVISARPGNQLDMNDLASRLERNGFERVSTVRDIGEFAVRGGILDLYAPGAEEPLRLDFFGDTLESIRAFDPASQRTTGTRKEFVLQPMSEITLSPDRFAGMEHWLPLFYTVFDHAGNMPVKHIAELRASGKKVLVAAWTEGSLDRLLQVLDEL---AVESGFDAGDLVIVAEQDILGDDQDFISEVASLNAGDIVVHVDHGIGRFIGLKTITAAGAPHDCLEIHYAGDDRLFLPVENIELLSRYG-SESSDAVLDKLGGGAWQMRKAKLKKRLLEIAGHLIQIAAERQMRGAPVMTPPDGLYAEFSARFPYDETDDQLTAIESVADDLAAGKPMDRLICGDVGFGKTEVALRAAFIAAMSGVQVAIVVPTTLLSRQHFKTFSKRFHGLPINLAHASRLVGTKELAAAKKGLEEGTVDIVVGTHALLGNSIKFKNLGLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFVSPFDPLVIRETLLRERYRGGQSFYVCPRISDLGEIEEFLKTHVPELKVAVAHGQMAPGVLDDIMNAFYDGQYDVLLSTTIVESGLDIPTANTMIVHRADMFGLAQLYQLRGRVGRSKQRAFALFTLPAGKMLTQMAERRLKVLQSLDTLGAGFQLASHDMDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVATLKGSWSPQIAIGTAVMIPEAYVPDLQLRLGLYRRLADLEEPQDIDAFGAELIDRFGPMPDEVQHLLKIVYIKALCRRANVEKLDAGPKGVVIQFRH
>P640576569 YP_001257567 BOV_A0544 transcription-repair coupling factor [Brucella ovis ATCC 25840]
--------------MEPIMYIVRDGQRIADLEQVLGFVSPDLPVLHLPAWDCLPYDRVSPGADAAARRLAALSALAVILTTANAVLQKLPPQAALGEQVISARPGNQLDMNDLAARLERNGFERVSTVRDIGEYAVRGGILDLYAQGAEEPLRLDFFGDTLETIRAFDPASQRTTGTRKEFVLQPMSEITLSSDRFAGMEHWLPLFYTVFDHAGSMPVKHIADLRASGKKVLVAAWTEGSLDRLCQVLDEL---AVESGFDTGDLVVVAEQDILGDDQDFISEVASLTAGDIVVHVDHGIGRFIGLKTITAAGAPHDCLEIHYAGDDRLFLPVENIELLSRYG-SEGSDAVLDKLGGGAWQARKAKLKKRLLEIAGHLIQIAAERQMRGAPVMTPPDGLYAEFAARFPDDETDDQLTAIEAVADDLAQGKPMDRLICGDVGFGKTEVALRAAFIAAMSGVQVAVVVPTTLLSRQHFKTFSNRFHGLPINVAHASRLVGAKELAATKKGLEEGTVDIVVGTHALLGSSIKFKNLGLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFVSPFDPLVIRETLLRERYRGGQSFYVVPRIADLTDIEEFLKEHVPELKVAVAHGQMAPGVLDDIMNAFYDGQYDVLLSTTIVESGLDIPTANTMIVHRADMFGLAQLYQLRGRVGRSKQRAFALFTLPAGKMLTQMAERRLKVLQSLDTLGAGFQLASHDMDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVATLKGSWSPQIAIGTAVMIPEAYVPDLQLRLGLYRRLADLEEPQDIDAFGAELIDHFGPMPDEVQHLLKIVYIKALCRRANVEKLDAEPKGVVIQFRH
>P642658642 YP_001932559 BAbS19_II06180 Mfd, transcription-repair coupling factor [Brucella abortus S19]
GVADGFEAFCLARLVEPIMYIVRDGQRIADLEQVLGFVSPDLPVLHLPAWDCLPYDRVSPGADAAARRLAALSALAVILTTSNAVLQKLPPQAALGEQVISARPGNQLDMNDLAARLERNGFERVSTVRDIGEYAVRGGILDLYAPGAEEPLRLDFFGDTLETIRAFDPASQRTTGTRKEFVLQPMSEITLSSDRFAGMEHWLPLFYTVFDHAGPMPVKHIADLRASGKKVLVAAWTEGSLDRLCQVLDEL---AVESGFDAGDLVVVAEQDILGDDQDFISEVASLTAGDIVVHVDHGIGRFIGLKTITAAGAPHDCLEIHYAGDDRLFLPVENIELLSRYG-SEGSDAVLDKLGGGAWQARKAKLKKRLLEIAGHLIQIAAERQMRGAPVMTPPDGLYAEFAARFPYDETDDQLTAIEAVADDLAQGKPMDRLICGDVGFGKTEVALRAAFIAAMSGVQVAVVVPTTLLSRQHFKTFSNRFHGLPINVAHASRLVGAKGLAATKKGLEEGTVDIVVGTHALLGSSIKFKNLGLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFVSPFDPLVIRETLLRERYRGGQSFYVVPRIADLTDIEEFLKEHVPELKVAVAHGQMAPGVLDDIMNAFYDGQYDVLLSTTIVESGLDIPTANTMIVHRADMFGLAQLYQLRGRVGRSKQRAFALFTLPAGKMLTQMAERRLKVLQSLDTLGAGFQLASHDMDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVATLKGGWSPQIAIGTAVMIPEAYVPDLQLRLGLYRRLADLEEPQDIDAFGAELIDRFGPMPDEVQHLLKIVYIKALCRRANVEKLDAGPKGVVIQFR-
>P637646745 YP_223417 BruAb2_0645 Mfd, transcription-repair coupling factor [Brucella abortus bv 1 9-941]
GVADGFEAFCLARLVEPIMYIVRDGQRIADLEQVLGFVSPDLPVLHLPAWDCLPYDRVSPGADAAARRLAALSALAVILTTSNAVLQKLPPQAALGEQVISARPGNQLDMNDLAARLERNGFERVSTVRDIGEYAVRGGILDLYAPGAEEPLRLDFFGDTLETIRAFDPASQRTTGTRKEFVLQPMSEITLSSDRFAGMEHWLPLFYTVFDHAGPMPVKHIADLRASGKKVLVAAWTEGSLDRLCQVLDEL---AVESGFDAGDLVVVAEQDILGDDQDFISEVASLTAGDIVVHVDHGIGRFIGLKTITAAGAPHDCLEIHYAGDDRLFLPVENIELLSRYG-SEGSDAVLDKLGGGAWQARKAKLKKRLLEIAGHLIQIAAERQMRGAPVMTPPDGLYAEFAARFPYDETDDQLTAIEAVADDLAQGKPMDRLICGDVGFGKTEVALRAAFIAAMSGVQVAVVVPTTLLSRQHFKTFSNRFHGLPINVAHASRLVGAKGLAATKKGLEEGTVDIVVGTHALLGSSIKFKNLGLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFVSPFDPLVIRETLLRERYRGGQSFYVVPRIADLTDIEEFLKEHVPELKVAVAHGQMAPGVLDDIMNAFYDGQYDVLLSTTIVESGLDIPTANTMIVHRADMFGLAQLYQLRGRVGRSKQRAFALFTLPAGKMLTQMAERRLKVLQSLDTLGAGFQLASHDMDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVATLKGSWSPQIAIGTAVMIPEAYVPDLQLRLGLYRRLADLEEPQDIDAFGAELIDRFGPMPDEVQHLLKIVYIKALCRRANVEKLDAGPKGVVIQFRH
>P637818151 YP_418836 BAB2_0661 DEAD/DEAH box helicase:Helicase, C-terminal:ATP/GTP-binding site motif A (P-loop):Haem peroxidase:Transcription-repair coupli... [Brucella melitensis bv Abortus 2308]
------------------MYIVRDGQRIADLEQVLGFVSPDLPVLHLPAWDCLPYDRVSPGADAAARRLAALSALAVILTTSNAVLQKLPPQAALGEQVISARPGNQLDMNDLAARLERNGFERVSTVRDIGEYAVRGGILDLYAPGAEEPLRLDFFGDTLETIRAFDPASQRTTGTRKEFVLQPMSEITLSSDRFAGMEHWLPLFYTVFDHAGPMPVKHIADLRASGKKVLVAAWTEGSLDRLCQVLDEL---AVESGFDAGDLVVVAEQDILGDDQDFISEVASLTAGDIVVHVDHGIGRFIGLKTITAAGAPHDCLEIHYAGDDRLFLPVENIELLSRYG-SEGSDAVLDKLGGGAWQARKAKLKKRLLEIAGHLIQIAAERQMRGAPVMTPPDGLYAEFAARFPYDETDDQLTAIEAVADDLAQGKPMDRLICGDVGFGKTEVALRAAFIAAMSGVQVAVVVPTTLLSRQHFKTFSNRFHGLPINVAHASRLVGAKGLAATKKGLEEGTVDIVVGTHALLGSSIKFKNLGLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFVSPFDPLVIRETLLRERYRGGQSFYVVPRIADLTDIEEFLKEHVPELKVAVAHGQMAPGVLDDIMNAFYDGQYDVLLSTTIVESGLDIPTANTMIVHRADMFGLAQLYQLRGRVGRSKQRAFALFTLPAGKMLTQMAERRLKVLQSLDTLGAGFQLASHDMDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVATLKGSWSPQIAIGTAVMIPEAYVPDLQLRLGLYRRLADLEEPQDIDAFGAELIDRFGPMPDEVQHLLKIVYIKALCRRANVEKLDAGPKGVVIQFRH
>P637331683 NP_699763 BRA0579 transcription-repair coupling factor [Brucella suis 1330]
------------------MYIVRDGQRIADLEQVLGFVSPDLPVLHLPAWDCLPYDRVSPGADAAARRLAALSALAVILTTANAVLQKLPPQAALGEQVISARPGNQLDMNDLAARLERNGFERVSTVRDIGEYAVRGGILDLYAPGAEEPLRLDFFGDTLETIRAFDPASQRTTGTRKEFVLQPMSEITLSSDRFAGMEHWLPLFYTVFDHAGPMPVKHIADLRASGKKVLVAAWTEGSLDRLCQVLDEL---AVESGFDAGDLVVVAEQDILGDDQDFISEVASLTAGDIVVHVDHGIGRFIGLKTITAAGAPHDCLEIHYAGDDRLFLPVENIELLSRYG-LEGSDAVLDKLGGGAWQARKAKLKKRLLEIAGHLIQIAAERQMRGAPVMTPPDGLYAEFAARFPYDETDDQLTAIEAVADDLAQGKPMDRLICGDVGFGKTEVALRAAFIAAMSGVQVAVVVPTTLLSRQHFKTFSNRFHGLPINVAHASRLVGAKELAATKKGLEEGTVDIVVGTHALLGSSIKFKNLGLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFVSPFDPLVIRETLLRERYRGGQSFYVVPRIADLTDIEEFLKEHVPELKVAVAHGQMAPGVLDDIMNAFYDGQYDVLLSTTIVESGLDIPTANTMIVHRADMFGLAQLYQLRGRVGRSKQRAFALFTLPAGKMLTQMAERRLKVLQSLDTLGAGFQLASHDMDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVATLKGSWSPQIAIGTAVMIPEAYVPDLQLRLGLYRRLADLEEPQDIDAFGAELIDRFGPMPDEVQHLLKIVYIKALCRRANVEKLDAGPKGVVIQFRH
>P643747154 YP_002734337 BMEA_B0553 transcription-repair coupling factor [Brucella melitensis ATCC 23457]
GVADGFEAFCLARLVEPIMYIVRDGQRIADLEQVLGFVSPDLPVLHLPAWDCLPYDRVSPGADAAARRLAALSALAVILTTANAVLQKLPPQAALGEQVISARPGNQLDMNDLAARLERNGFERVSTVRDIGEYAVRGGILDLYAPGAEEPLRLDFFGDTLETIRAFDPASQRTTGTRKEFVLQPMSEITLSSDRFAGMEHWLPLFYTVFDHAGPMPVKHIADLRASGKKVLVAAWTEGSLDRLCQVLDEL---AVESGFDAGDLVVVAEQDILGDDQDFISEVASLTAGDIVVHVDHGIGRFIGLKTITAAGAPHDCLEIHYAGDDRLFLPVENIELLSRYG-SEGSDAVLDKLGGGAWQARKAKLKKRLLEIAGHLIQIAAERQMRGAPVMTPPDGLYAEFAARFPYDETDDQLTAIEAVADDLAQGKPMDRLICGDVGFGKTEVALRAAFIAAMSGVQVAVVVPTTLLSRQHFKTFSNRFHGLPINVAHASRLVGAKELAATKKGLEEGTVDIVVGTHALLGSSIKFKNLGLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFVSPFDPLVIRETLLRERYRGGQSFYVVPRIADLTDIEEFLKEHVPELKVAVAHGQMAPGVLDDIMNAFYDGQYDVLLSTTIVESGLDIPTANTMIVHRADMFGLAQLYQLRGRVGRSKQRAFALFTLPAGKMLTQMAERRLKVLQSLDTLGAGFQLASHDMDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVATLKGGWSPQIAIGTAVMIPEAYVPDLQLRLGLYRRLADLEEPQDIDAFGAELIDRFGPMPDEVQHLLKIVYIKALCRRANVEKLDAGPKGVVIQFR-
>P641328902 YP_001594527 BCAN_B0579 transcription-repair coupling factor [Brucella canis ATCC 23365]
GVADGFEAFCLARLVEPIMYIVRDGQRIADLEQVLGFVSPDLPVLHLPAWDCLPYDRVSPGADAAARRLAALSALAVILTTANAVLQKLPPQAALGEQVISARPGNQLDMNDLAARLERNGFERVSTVRDIGEYAVRGGILDLYAPGAEEPLRLDFFGDTLETIRAFDPASQRTTGTRKEFVLQPMSEITLSSDRFAGMEHWLPLFYTVFDHAGPMPVKHIADLRASGKKVLVAAWTEGSLDRLCQALDEL---AVESGFDAGDLVVVAEQDILGDDQDFISEVASLTAGDIVVHVDHGIGRFIGLKTITAAGAPHDCLEIHYAGDDRLFLPVENIELLSRYG-LEGSDAVLDKLGGGAWQARKAKLKKRLLEIAGHLIQIAAERQMRGAPVMTPPDGLYAEFAARFPYDETDDQLTAIEAVADDLAQGKPMDRLICGDVGFGKTEVALRAAFIAAMSGVQVAVVVPTTLLSRQHFKTFSNRFHGLPINVAHASRLVGAKELAATKKGLEEGTVDIVVGTHALLGSSIKFKNLGLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFVSPFDPFVIRETLLRERYRGGQSFYVVPRIADLTDIEEFLKEHVPELKVAVAHGQMAPGVLDDIMNAFYDGQYDVLLSTTIVESGLDIPTANTMIVHRADMFGLAQLYQLRGRVGRSKQRAFALFTLPAGKMLTQMAERRLKVLQSLDTLGAGFQLASHDMDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVATLKGGWSPQIAIGTAVMIPEAYVPDLQLRLGLYRRLADLEEPQDIDAFGAELIDRFGPMPDEVQHLLKIVYIKALCRRANVEKLDAGPKGVVIQFR-
>P641354358 YP_001622386 BSUIS_B0575 transcription-repair coupling factor [Brucella suis ATCC 23445]
GVADGFEAFCLARLVEPIMYIVRDGQRIADLEQVLGFVSPDLPVLHLPAWDCLPYDRVSPGADAAARRLAALSALAVILTTANAVLQKLPPQAALGEQVISARPGNQLDMNDLAARLERNGFERVSTVRDIGEYAVRGGILDLYAPGAEEPLRLDFFGDTLETIRAFDPASQRTTGTRKEFVLQPMSEITLSSDRFAGMEHWLPLFYTVFDHAGPMPVKHIADLRASGKKVLVAAWTEGSLDRLCQVLDEL---AVESGFDAGDLVVVAEQDILGDDQDFISEVASLTAGDIVVHVDHGIGRFIGLKTITAAGAPHDCLEIHYAGDDRLFLPVENIELLSRYG-LEGSDAVLDKLGGGAWQARKAKLKKRLLEIAGHLIQIAAERQMRGAPVMTPPDGLYAEFAARFPYDETDDQLTAIEAVADDLAQGKPMDRLICGDVGFGKTEVALRAAFIAAMSGVQVAVVVPTTLLSRQHFKTFSNRFHGLPINVAHASRLVGAKELAATKKGLEEGTVDIVVGTHALLGSSIKFKNLGLLIIDEEQHFGVKHKERLKELKSDVHVLTLSATPIPRTLQLALTGVRELSLITTPPVDRMAVRTFVSPFDPLVIRETLLRERYRGGQSFYVVPRIADLTDIEEFLKEHVPELKVAVAHGQMAPGVLDDIMNAFYDGQYDVLLSTTIVESGLDIPTANTMIVHRADMFGLAQLYQLRGRVGRSKQRAFALFTLPAGKMLTQMAERRLKVLQSLDTLGAGFQLASHDMDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVATLKGSWSPQIAIGTAVMIPEAYVPDLQLRLGLYRRLADLEEPQDIDAFGAELIDRFGPMPDEVQHLLKIVYIKALCRRANVEKLDAGPKGVVIQFRH
>P637073985 NP_102548 mll0827 transcription repair coupling factor [Mesorhizobium loti MAFF303099]
GVADGYEAFALVQAALPVLFVARDGQRLPVIIEALAFAAPGLPVLELPAWDCLPYDRVSPGSDAAAKRLDALTAMAVILTTANALLQRIPPADLVEAQTFHARPGNQIDMNALIARLETSGFERVPTVRGIGEFAVRGGILDLFAPGWAEALRLDFFGDTLESIRVFDAATQRTTGQRKSMALQAMSEVALTPERFAGMEHWLPFFYTVFDYLPDTPVRHIADERAARRRIVIAGWTEGSLDRLGQILAEL---PLESGFETERLVVVAEQDILGDASDFIAEASALSTGDIVVHADHGIGRFIGLRTIEAVGAPHDCLEIHYAGDDRLFLPVENIELLSRYG-SDSAEATLDKLGGGAWQSRKAKLKRRLLDMAGQLIRIAAERQMRAAPALVPAEGLYDEFAARFPYEETDDQQTAIDSVRDDLGAGKPMDRLICGDVGFGKTEVALRAAFIAAMEGFQVAVVVPTTLLSRQHFKTFSQRFSGLPIRVAQASRLVGAKELAETKKALAEGQVDIVVGTHALLGSSISFKNLGLLIIDEEQHFGVKHKERLKDLKTDVHVLTLSATPIPRTLQLALTGVRELSLIATPPVDRMAVRTFISPFDPLVIRETLLRERYRGGHSFYVVPRISDLSEIHEFLKESVPELKVAVAHGQMPPGELDDIMNAFYDGQYDVLLSTTIVESGLDIPTANTLIIHRADMFGLSQLYQLRGRVGRSKVRAYALFTLPANRKLTDTAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVAEVKDSWSPQIAVGTAVMIPESYVPDLQLRLALYRRLGDLENTEEIDAFGAELIDRFGPLPDEVKHLLKIVFIKALCRKANVEKLDAGPKGVVIHFRK
>P638067594 YP_674262 Meso_1702 transcription-repair coupling factor [Mesorhizobium sp. BNC1]
GVADGYEPFALARISAPLIFVVRDGQRLPLIAEALQFAAPGLPVMTLPAWDCLPYDRVSPGADAAARRLDALSAMAVVLVSANAVLQRMPPAKHIAAQGFRAKPGNQVDMEALIGRLETAGFERVPTVRDMGQYAVRGGILDLFAPGWEEALRLDFFGDTLDSIRAFDVATQRTTGQRTEVMLQAMSEVMLTPDRFSGMEHWLPLFYTVFDYLPDAPLKHIGERRAHGKHVLIAGWSEGSADRLSQILAEL---PLETGFETPKLVVVAEQDILGDAADFISEASALSAGDIVVHADHGIGRFVGLKTIEAAGAPHECLEIHYAGDDRLFLPVENIELLSRYG-SDSAEATLDKLGGGAWQSRKAKLKKRLLEMAGQLIKLAAERQMRPAAKIMPPEGLYGEFAARFPYEETDDQQTAIDAVIEDFSSGRPMDRLVCGDVGFGKTEVALRAAFLAAMEGLQVAVVVPTTLLARQHFKTFRDRFAGLPVTVRQASRLVTAKELAETKKGVADGTVDIVVGTHALLGNSIQFKNLGLLIIDEEQHFGVKHKERLKELKADVHVLTLSATPIPRTLQLALTGVRELSLIATPPVDRMAVRTFISPFDPLVIRETLLRERYRGGQSFYVVPRISDLAEVKEFLAEQVPELKVATAHGQIAAGELDDIMNAFYDGKYDVLLSTTIVESGLDIPTANTLIVHRADMFGLAQLYQLRGRVGRSKVRAYALFTLPANRTLTPTAERRLKVLQSLDALGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGYELYQQMLEEAVAELRGTWSPQITVGTAVMIPEHYVPDLQLRLGLYRRLGEIETPEEIDGFGAELIDRFGPMPEEVQHLLKIVYIKALCRRANVEKLDAGPKGVVLHFRN
>P640878670 YP_001414345 Plav_3081 transcription-repair coupling factor [Parvibaculum lavamentivorans DS-1]
ETPEGFDALVLADMA-TLLHVARDDARMAALAEALAFFAPDIEIEIFPAWDCLPYDRVSPNAEISARRMAALSRLLILLATVNAVLQRVPARDTVRTSAWSARTGNRIDLNELTGYLAANGYSRTGTVREAGEFAVRGGIVDIFPSGFELPVRLDMFGDTLDAIRSFDAVTQRTVGQLHGLDLVPASEVHLDKEKHAGMEHWLPLFHTLFDYVPGA--GHILGLRRAGKRVAIASWSEGARDRLQHVLSDLIVLGLEAGFETDEIALISEQDVLGDAENFLTEASSLSPGDLVVHVDHGIGRFERLQTIEVMGAPHDCLLLIYHGGDKLYLPVENIELLSRYGS--DDLAQLDRLGGTGWQARKARLKERIREMAGELIKIAAARELKTAPAMEPQPGAYDEFCARFPFTETEDQEQAIDAVLEDLARGRPMDRLVCGDVGFGKTEVALRSAFVAALAGFQVAVVVPTTLLARQHYRTFAARFQGLPVRVRQMSRLVSAKDMAEAKEGLASGQVDIVIGTHALLGKQVKFRNLGLVIVDEEQHFGVVHKEQLKKLRAEVHVLTLTATPIPRTLQLALSGVRELSLIATPPVDRLAVRTYVSPFDPVVVREALLREHFRGGQSFYVVPRIADLAEAEEFLRQYVPEVKFVLAHGQMAAGEIEDKMTAFYDGKYDVLVSTTIVESGLDIPTANTLVVHRADMFGLSQLYQLRGRVGRSKARAYAYLTVPANRTLTAGADKRLRVLQSLDSLGAGFSLASHDLDIRGAGNLLGDEQSGHIKEVGYELYQEMLEEAVASMRGGWSPQISVGTPVLIPDGYVPDLDARMALYRRLSDVETRSEIDGFAAELIDRFGKLPQEVEFLLKIVEIKGLCRTANVEKIEAGPKGVVLSFRE
>P643604739 YP_002502228 Mnod_7185 transcription-repair coupling factor [Methylobacterium nodulans ORS 2060]
RVPDGFDALVVADLARVLVHVARDGTRSAAFASALAFVAPEIEVLSVPAWDCQPYDRVSPNPAIAAERMTALSRLRIVATTVNALVQRVPARDRIAVETFSAAVGNALDTDKIVAWLEANGFLRTGTVRDTGEYAVRGGIIDLSPPGLPNPVRLDFFGDTLESIRSFDPETQRTIGQLRSLDLVPMSEVQLTTERAAGIEHWLPLFATLFDYLAGVPLQHLRDLQGTGHHVILAAWSEGSRDRLCGVLADW---GLESGFTIERLAVIAETDILGDPQDVILEVQALEAGDLVVHADHGIGRFTGLKTVTAAGAPHDCLEIQYSGGL-LLLPVENIELLTRYG-SEEADVPLDKLGGGAWQARKAKLKRRILEMAGALIKVAAERFLRSAPRMEPPEGTYGEFAARFPYEETEDQEAAIAATLGDLTAGRPMDRLICGDVGFGKTEVALRAAFVTAISGKQVAVVVPTTLLARQHYRTFAERFKALPVNIAQASRFVSNTELKKVREGLANGTVDIVVGTHALLAKTVAFRDLGLIIIDEEQHFGVAHKERLKALRSEVHVLTLSATPIPRTLQLAMTGVRELSIIATPPVDRLAVRTFVTPFDPLLIREALLRERYRGGQAFYVVPRIDHLDEVKRFLDREMPEAKVGIAHGQMAAGQLEDVMTAFYEGRFDILLSTTIVESGLDIPTANTLIVHRADMFGLAQLYQLRGRVGRSKARAYALFTTPENKTLTVQAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGYELYQQMLEDAVAALKAGWSPTIALGAPVTMPEDYVSDLSVRLGLYRRLATLENDAELESFGAELIDRFGPLPPEVEQLLKIVTIKILCRETNVEKVEAGPKGIVMHFRD
>P641646404 YP_001773008 M446_6308 transcription-repair coupling factor [Methylobacterium sp. 4-46]
RVPDGFDALVVADLARALVHVARDGTRSAAFAGALAFVAPEIEVLSIPAWDCQPYDRVSPNPAIAAERMTALSRLRVVVTTVNALVQRVPARDRIAVETFSAAVGNAVDTDKIVAWLEANGFLRTGTVRDTGEYAVRGGIIDLSPPGLPNPVRLDFFGDTLESIRSFDPETQRTIGQLRSLDLVPMSEVQLTTERAAGLEHWMPLFYTLFDYLAGVPLQHVRALQGSGHHVILAAWSEGSRDRLCGVLTDW---GLEAGFTIERLAVVAEGDILGDPQDVILEVQALSPGDLVVHADHGIGRFTGLKTVTAAGAPHDCLEIQYNGGL-LLLPVENIELLTRYG-SEEADVPLDKLGGGAWQARKAKLKRRILEMAGALIKVAAERFLRPAPKLVPPDGTYGEFAARFPYEETEDQEAAIAATLGDLTAGRPMDRLICGDVGFGKTEVALRAAFVAAISGRQVAVVVPTTLLARQHYRTFAERFKGLPVNVAQASRFVSSAELKRVREGLADGTVDIVVGTHALLAKTIGFRDLGLIIIDEEQHFGVAHKERLKALRAEVHVLTLSATPIPRTLQLAMTGVRELSIIATPPVDRLAVRTFVTPFDPLLVREALLRERYRGGQAFYVVPRIEHLDEVKRFLDREMPEAKVGIAHGQMPAGQLEDVMTAFYEGKFDILLSTTIVESGLDIPTANTLIVHRADMFGLAQLYQLRGRVGRSKARAYALFTTPEGKALTVQAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGDEQSGHIKEVGYELYQQMLEDAVAALKEGWSPTIALGAPVTMPEEYVSDLSVRLGLYRRLATLDSDAELESFGAELIDRFGPLPPEVEQLLKIVTIKILCRETNVEKVEAGPKGIVFHFRD
>P641627353 YP_001754325 Mrad2831_1647 transcription-repair coupling factor [Methylobacterium radiotolerans JCM 2831]
NAPEGFDALALADLARVLVHVARDSGRSAAFQAALGFVAPEMDVMSLPAWDCQPYDRVSPTTAVAAARMTALARLRILCTTVNALVQRVPPRAHIAKEAFSAAIGNVVAMDDVVAWVEANGFLRTGTVRDTGEYAVRGGILDLSPPGLPAPIRLDFFGDTLESIRAFDPETQRTTGQLRSLDLMPMSEVQLTTERYAGLEHWMPLFYTLFDYLGGVPLAHIRDLQGSGHHVILGAWSDGSRDRLCGVLTDW---GLEAGFTAGELAVVSEGDILGDPQDVILEVQALQPGDLVVHADHGIGRFVGLKTIHAAGAPHDCLELQYTGGL-LLLPVENIELLTRYG-SEDSEVALDRLGGGAWQARKAKMKRRILEMAGELIKVAAQRFVRKAPALQAPEGLYGEFAARFPFEETEDQANAIDAVLDDLNAGRPMDRLVCGDVGFGKTEVALRAAFAAAISGKQVAVIVPTTLLARQHYRTFAERFKGLPVQVAQLSRFASAAEMKQTRAGLAAGTVDIVVGTHALLAKNIAFKDLGLIIVDEEQHFGVAHKERLKALQADVHVLTLSATPIPRTLQLAMTGVRELSIIATPPVDRLVVRTFVTPFDPLTIREALLRERYRGGQSFYVVPRIEDLAEVKKFLDAEMPEIKVAVAHGQMAAGQLEDVMTAFYEGKFDVLLSTTIVESGLDIPTANTLIVHRADMFGLAQLYQLRGRVGRSKARAYALFTTPANRQLTAQAEQRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGDAQSGHIKEVGYELYQQMLEDAVTALKAGWSPTIALGAPVTIPEDYVEDLGVRLALYRRLATIQDDAEMESFGAELIDRFGPLPPEVEQLLKIGTIKILCLKANVEKVEAGPKGVVVHFRD
>P642653354 YP_001927307 Mpop_4676 transcription-repair coupling factor [Methylobacterium populi BJ001]
SVPDGFDALVAADLARVLVHVARDSGRSNAFQNALKFVAPEIEAMSFPAWDCQPYDRVSPNAAIAAQRMTALSRLRILCTTVNALVQRVPPRARVAVETFSAAIGNVVPMDKVVAWVEANGFLRTGTVRDTGEYAVRGGILDLSPPGLPNPIRLDFFGDTLESIRAFDPETQRTVGSLRSLDLVPMSEVQLTTERYAGLEHWMPLFYTLFDYLGDVPMAHIRDLQASGHHVILGSWSDGSRDRLCGVLTDW---GLEAGFTLDKLAVVAEGDILGDPQDIILEVQALQPGDLVVHADHGIGRFVGLKTVTAAGAPHDCLELQYAGGL-LLLPVENIELLTRYG-SEDSEVALDRLGGGAWQARKAKMKRRILEMAGELIKVAAARFVKPAPSLKAPEGLYEEFAARFAFQETEDQANAIDAVLDDLNAGRPMDRLVCGDVGFGKTEVALRAAFAAAISGKQVAVVVPTTLLARQHYRTFAERFKGLPINVAQLSRFVSAGDQRQTRAGLAEGKVDIVVGTHALLAKNVAFKDLGLIIVDEEQHFGVAHKERLKALQADVHVLTLSATPIPRTLQLAMTGVRELSIIATPPVDRLAVRTFVTPFDPLLIREALLRERYRGGQAFYVVPRIEDLAEVKRFLDQEMPEVTVAVAHGQMAAGQLEDVMTAFYEGKYDVLLSTTIVESGLDIPTANTLIVHRADMFGLAALYQLRGRVGRSKARAYALFTTPANRQLTAQAEQRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGDAQSGHIKEVGYELYQQMLEDAVTALKAGWSPTIALGAPVTIPEDYVEDLTVRLGLYRRLSTIENDAEMESFGAELIDRFGPLPPEVEQLLKIVTIKILCREANVEKVEAGPKGVVVHFRD
>P643527231 YP_002423236 Mchl_4532 transcription-repair coupling factor [Methylobacterium chloromethanicum CM4]
SVPDGFDALVAADLARVLVHVARDSGRSNAFQNALKFVAPEIEAMSVPAWDCQPYDRVSPNGAIAAQRMTALSRLRILCTTVNALVQRVPPRSRVAVETFSAAIGNVVPMDKVVAWVEANGFLRTGTVRDTGEYAVRGGILDLSPPGLPNPIRLDFFGDTLESIRAFDPETQRTVGSLRSLDLVPMSEVQLTTERYAGLEHWMPLFYTLFDYLGDVPMAHIRDLQASGHHVILGSWSEGSRDRLCGVLTDW---GLESGFTLDRLAVVAEGDILGDPQDIILEVQALQPGDLVVHADHGIGRFVTLKTVTAAGAPHDCLELQYAGGL-LLLPVENIELLTRYG-SEDSEVALDRLGGGAWQARKAKMKRRILEMAGDLIKIAAARFVKSAPSLKAPEGLYEEFAARFAFQETEDQASAIDAVLDDLNAGRPMDRLVCGDVGFGKTEVALRAAFAAAISGKQVAVVVPTTLLARQHFRTFAERFKGLPINVAQLSRFVSAGEQRQNRAGLADGTVDIVVGTHALLAKNVAFKDLGLIIVDEEQHFGVAHKERLKALQADVHVLTLSATPIPRTLQLAMTGVRELSIIATPPMDRLAVRTFVTPFDPLLVREALLRERYRGGQSFYVAPRIEDLAEVKRFLDTEMPETTVAVAHGQMAAGQLEDVMTAFYEGKYDVLLSTTIVESGLDIPTANTLIVHRADMFGLAALYQLRGRVGRSKARAYALFTTPANRQLTTQAEQRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGDAQSGHIKEVGYELYQQMLEDAVTALKAGWSPTIALGAPVTIPEDYVEDLTVRLGLYRRLSTLENDAEMESFGAELIDRFGPLPPEVEQLLKIVTIKILCRDANVEKVEAGPKGVVVHFRN
>P641369953 YP_001641603 Mext_4163 transcription-repair coupling factor [Methylobacterium extorquens PA1]
SVPDGFDALVAADLARVLVHVARDSGRSNAFQNALKFVAPEIEAMSVPAWDCQPYDRVSPNGAIAAQRMTALSRLRILCTTVNALVQRVPPRSRVAVETFSAAIGNVVPMDKVVAWVEANGFLRTGTVRDTGEYAVRGGILDLSPPGLPNPIRLDFFGDTLESIRAFDPETQRTVGSLRSLDLVPMSEVQLTTERYAGLEHWMPLFYTLFDYLGDVPMAHIRDLQASGHHVILGSWSEGSRDRLCGVLTDW---GLESGFTLDRLAVVAEGDILGDPQDIILEVQALQPGDLVVHADHGIGRFVTLKTVTAAGAPHDCLELQYAGGL-LLLPVENIELLTRYG-SEDSEVALDRLGGGAWQARKAKMKRRILEMAGDLIKIAAARFVKSAPSLKAPEGLYEEFAARFAFQETEDQANAIDAVLDDLNAGRPMDRLVCGDVGFGKTEVALRAAFAAAISGKQVAVVVPTTLLARQHFRTFAERFKGLPINVAQLSRFVSAGDQRQNRAGLADGTVDIVVGTHALLAKNVAFKDLGLIIVDEEQHFGVAHKERLKALQADVHVLTLSATPIPRTLQLAMTGVRELSIIATPPMDRLAVRTFVTPFDPLLVREALLRERYRGGQSFYVAPRIEDLAEVKRFLDTEMPETTVAVAHGQMAAGQLEDVMTAFYEGKYDVLLSTTIVESGLDIPTANTLIVHRADMFGLAALYQLRGRVGRSKARAYALFTTPANRQLTTQAEQRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGDAQSGHIKEVGYELYQQMLEDAVTALKAGWSPTIALGAPVTIPEDYVEDLTVRLGLYRRLSTLENDAEMESFGAELIDRFGPLPPEVEQLLKIVTIKILCRDANVEKVEAGPKGVVVHFRD
>P641704891 YP_001832032 Bind_0894 transcription-repair coupling factor [Beijerinckia indica indica ATCC 9039]
SVADGYDAFCLADLIHVLVHVARDSTRARAFGEALAFAAPDVEILDLPSWDCQPYDRVSPNAAIAAKRMMVLARLRILSTTVNALVQRLPPLRFIAANTFSAAPGNAVALDGLAAWLETNGFARSSTVRDTGEYAVRGGIVDLYAPGMAQPVRLDFFGDTLESIRSFDPETQRTIGQLRALDLVPMSEVQLTTERHPGCEHWLPLFYTLFDYVGGAPFTHVRALQGAGKRVILAAWTDGSRERLAHVMADI---GLEQGFEAEGLAVVGEQDILGDAQDFLSEVASLQAGDLVVHVEHGIGRFIGLQTIEAAGVRHDCLELHYAEGTKLFLPVENLELLSRYG-SEESDVPLDRLGGGAWQKRKARMRRHILEMASGLIKVAAARETREAPKLVPPEGLYAEFCSGFPYEETEDQQATIDSVLEDLSSGKPMDRLVCGDVGFGKTEVALRAAFDTAINGKQVAVIVPTTLLARQHYKNFSARFAHLPVTVAQMSRMVSAADLKAAKAGISSGNVDIIVGTHAVLGKGITFKDLGLVIIDEEQHFGVKHKERLKELRAEVHVLTLSATPIPRTLQLAMTGVRDLSIIATPPVDRLAVRTFISPFDDLLVREALLRERYRGGQSFYVAPRIEDLEDVATYLRTHVPEVKFVVAHGQMAATELEDKMAAFYEGKYDVLLSTAIVESGLDIPTANTLIVHRADMFGLAALYQLRGRVGRSKIRAYALFTVPPNKTLTPQAERRLKVLSSLDTLGAGFQLASHDLDIRGAGNLLGDAQSGHIKEVGYELYQQMLQEAVEALKSGWSPTITLGTPVTIPEDYVPDLQLRLTLYRRLSTIESEAEIESFAAEMIDRFGPMPKEVEQLMQLVAIKLLCRKAHVEKVDAGPKGVIIGFRD
>P643465532 YP_002362507 Msil_2211 transcription-repair coupling factor [Methylocella silvestris BL2]
SLADGFDAFCVADLTRALVHVARDSQRAASFAEAFAFAAPDIELLDFPGWDCQPYDRVSPNASVTARRMIVLSRLRILSTTIKALIQRVPPVRQMAADTFSAAPGNVVDLNALTLWLETNGFVRASVVREAGEYAVRGGILDLYAPGMAQPVRLDFFGDALESIRAFDPESQRTLFPLRGLDLVPMSEVQLTSDRPAGHEHWLPLFYTVLDYAGRAPLDHVKALQSGGARVIVAAWSDGSRERLAHVLADI---GLEAGFEAESLAIVGEQDVLGDAKDFLSEVGALAAGDIVVHVDHGIGRFVGLQSIDAGGAPHDCLELHYAEGAKLFLPVENLELLSRYG-SEDTEVQLDRLGGGGWQKRKAKMRKRILEMAAGLIKIAAARFTKEAAKLAPPENLYDEFCAGFPYDETEDQLTTIDAVLEDMASGRPMDRLVCGDVGFGKTEVALRAAFAAAIEGKQVAVIVPTTLLARQHYKNFSSRFAHLPVKVAQMSRMVSAADLKAAKAGAASGDIDIVVGTHAALGKGVTYKDLGLVIIDEEQHFGVKHKERLKELRAEVHVLTLSATPIPRTLQLALTGVRELSIIATPPVDRLAVRTFITPFDTLLVREALLRERYRGGQSFYVCPRIDDIQDAAAFLRQHVPEVKFVIAHGQMPATELEDKMSAFYDGQFDVLLSTAIVESGLDIPTANTLIVHRADMFGLAQLYQLRGRVGRSKVRAYALFTVPAERAMTAQAEKRLKVLQSLDTLGAGFELASHDLDIRGAGNLLGDDQSGHIREVGYELYQQMLQEAVEALKAGWSPAITLGAPVTIPEDYVADLQLRLQLYRRLAGLETDEEIESFAAEMIDRFGPLPPEVAQLMKLVSIKALCRKAHVEKVEAGPKGVIVSFRD
>P641258827 YP_001524137 AZC_1221 transcription-repair coupling factor [Azorhizobium caulinodans ORS 571]
RVPEGMQGLVVADLARSLTVVCRDGQRLAALERGLAFFAPEIEVLSFPSWDCLPYDRASPNAAITARRMATLARL-VLLTTVNATVQRVPARDLLAAQSLSARPGNAIALEGIVEWAERNGYLRTPTVRDTGEYAVRGGLIDLYPPGLDAPIRLDFFGDTLESIRAFDPETQRSSGTLHALELVPMAEFQLTTDRHAGMEHWLPLFHTLFDYLDRTPFTHVRDLQGRGKKVILAGWSEGSRERLSTVMADY---GLERGFETPDFAIIGEQDILGDPQDVISELTSLTAGDLVVHVDHGIGRFIGLKAIEAMGAPHDCLEIHYAGGDKLFLPVENLELLTRYG-SEDTEAQLDKLGGGGWQARKARMKKRIREMAGELIKIAAARQLSEAPRLVPAAGLYDEFRARFPYEETDDQEAAISAVLDDLSSGHPMDRLVCGDVGFGKTEVALRAAFAVALSGKQVAVVVPTTLLARQHFRTFSERFKGLPVNVAQASRMVTGKDLTAVKKGLTDGTVDIVVGTHALLGKTIQFRDLGLVIVDEEQHFGVAHKERLKALRSEVHVLTLTATPIPRTLQLAMTGVRELSLIATPPVDRLAVRTFVTPFDPLIVREALLRERYRGGQSFYVVPRIDDLAEVREFLEKSVPEVKVAVAHGQMAAGTLEDIMTAFYDGQYDVLLSTTIVESGLDVPNANTLIVHRADMFGLAQLYQLRGRVGRAKARAYAIFSVPATKPITAQAERRLKVLQSLETLGAGFQLASHDLDIRGAGNLLGDEQSGHIKEVGYELYQEMLEEAIAHLKAGWSPNITIGMPVLIPEEYVTDLHVRLALYRRLADITEDAELDAFGVELVDRFGPAPEEVTHLLRLSQIKTLARKANVEKVDAGPKGVVLAFRE
>P640883523 YP_001419140 Xaut_4262 transcription-repair coupling factor [Xanthobacter autotrophicus Py2]
RVADGMEGMVVADLARSLTVICRDGQRMAAVERGLAFFAPELEVLSFPSWDCLPYDRASPNASIVARRMATLAKL-VLLTTVNATVQRVPAKGLVAAQSLVAAPGNTIDLEGVTQWAEQNGFLRTSTVRDTGEYAVRGGLIDLFPPGLDAPIRLDFFGDTLETIRAFDPETQRTTGQVRSLDLVPMAEFQLTTERHAGMEHWLPLFHTLFDYLEGGTLAHVRELQ-KSRKVILAGWSEGSRERLGTVLADF---GLEAGFETPDFAVIGEQDILGDPQDVLTELTALTAGDLVVHVDHGIGRFIGLKTVEAMGAPHDCLEIHYAGGDKLFLPVENLELLSRYG-SEDTEAQLDKLGGGAWQARKARMKKRIREMASELIKIAAQRQLGEAPKLVPAMGLYDEFRARFPYEETDDQDAAIDAVLDDLASGHPMDRLICGDVGFGKTEVALRAAFAVALSGKQVAVVVPTTLLARQHFKTFSERFKGLPVNVAQASRMVTGKDLTAVKKGIADGTVDIVVGTHALLGKAISFKDLGLVIVDEEQHFGVSHKERLKQLRAEVHVLTLTATPIPRTLQLAMTGVRELSIIATPPVDRLAVRTFITPFDPLVVREALLRERYRGGQSFYVVPRIEDLAEVREFLAASVPEVKVAVAHGQLAAGALEDIMTAFYDGQYDVLLSTTIVESGLDVPNANTLIVHRADMFGLAQLYQLRGRVGRAKARAYAIFTVPATKPMTVQAERRLKVLQSLETLGAGFQLASHDLDIRGAGNLLGDEQSGHIKEVGYELYQEMLQEAIAHLKAGWSPNITIGMPVLIPEDYVADLHVRLALYRRLADIQDDGEIDAFGAELVDRFGPTPEEVGQLLKLTQIKALARKANVEKVDAGPKGVVLGFRD
>P643404251 YP_002289189 OCAR_6210 transcription-repair coupling factor [Oligotropha carboxidovorans OM5]
NTAEGAEGLIVADLARSLAVLCRHTARMAQLTRALEFFAPDVAVMQFPAWDCQPYDRVSPHGGILAQRLTTLARLLVVLTSVNAIVQRVPSRDAMAAQALSVAPGHRVPMDSITAWLEHNGYSRTSTVREPGEYAVRGGILDLFPAGLDQPVRFDFFGDTLESIRTFDAETQRTLLDMRALDLVPVSEFQLTTERHPGMEHWQPLFTTLFDYLGGTPFSHVNQLHAARKKVVVALWSEGSRERMASMLKDL---GLDSGFETDGVALITEQDILGDVENFISEVTSLATGDLVVHVEHGIGRYIGLQTLEVSGAPHDCLELHYANNAKLYLPVENIELLSRYG-AEGAGVELDRLGGGGWQARKAKLKNRIREIAGDLIKIAAERQLHEAPKFPLHQGLYDEFCARFPHDETEDQLTAINASLDDLNAGKPMDRLICGDVGFGKTEVALRAAFAVAMEGRQVAVVVPTTLLARQHAKNFTDRFRGFPVKIAQASRLVSAKELRETKKGLAEGNIDIVVGTHALLGKTIKFKNLGLIIVDEEQHFGVSHKERLKQLRAEVHVLTLSATPIPRTLQLALTGVRDLSIIASPPVDRLAVRTFVAPFDPLMIREALLRERYRGGQAFYVCPRIEDLAEAKDFLDKNVPEMKVAVAHGQMAPGVIEDIMSAFYDGKFDILLSTTIVESGLDIPNANTLIVHRADMFGLAQLYQLRGRVGRSKLRAYALFTLPAQRKITAQAERRLKVLQSLENLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEEILNLKAGWSPQIMLGMPVLIPEDYVSDLAVRLSLYRRLADFETDEEIADFGAEMRDRFGPLPDEVRFLFKLASIKNYCRRANIEKLDAGPKGASISFRD
>P637970510 YP_577311 Nham_2053 transcription-repair coupling factor [Nitrobacter hamburgensis X14]
NVAEGAEGLVVSDLARSLAVVCRDGPRMQQLARALEFFAPDISVMQFPAWDCQPYDRVSPHGGILAQRLTTLARLLIVLTTVNAILQRVPARAIVASQALSVAPGHVVPMDSIAAWLEHNGYNRSSTVREPGEYAVRGGILDLFPSSLDQPVRFDFFGDSLESIRSFDPETQRTLLDVRSLDLVPISEFQFVTERHPGMEHWLPLFHTLFDYLDGAPISYVQALQAARKKVVVALWSEGSRDRMASMLRDV---GMESGFETEAVAVVSEQDILGDLENFISEATSLAAGDLVVHVEHGIGRFTGLQTLEVGGAPHDCLELRYANETKLFLPVENIELLSRYG-SDHANVELDRLGGSGWQARKAKLKNRIREIAGELIKIAAARHLHEAPKMPVQSGLYDEFCARFPYEETEDQLGAIHASLKDLESGRPMDRLICGDVGFGKTEVALRAAFAVALDGKQVAVVVPTTLLARQHARTFTERFRGFPVNVAQASRLVSSKELAQVKKGIADGSVDIVVGTHALLGKSIKFRDLGLLVVDEEQHFGVSHKERLKQLRAQVHVLTLSATPIPRTLQLALTGVRDLSIIASPPVDRLAVRTFVAPHDPLMIREALLRERYRGGQAFYVVPRIDDLAEVKDFLDKHVPEMKVAVAHGQMAPTVIEDIMSAFYDGKYDVLLSTTIVESGLDIPSANTLIVHRADMFGLAQLYQLRGRVGRSKLRAYALFTLPSTHKITAQAERRLKVLQSLETLGAGFQLASHDLDIRGAGNLLGEEQSGHIREVGFELYQSMLEEAILNLKAGWSPQITIGMPVLIPEDFVADLAVRLSLYRRLADLDTDDEIEDFGAELRDRFGPLPDEVRYLFKVAAIKAYCRRANVEKVDAGPKGAVISFRD
>P637713066 YP_318126 Nwi_1513 transcription-repair coupling factor [Nitrobacter winogradskyi Nb-255]
NVAEGAEGLVVSDLARSLTVVCRDGPRMQQLARALEFFASDISVMQFPAWDCQPYDRVSPHGGVLAQRLTTLARLLIILTTVNAILQRVPAREIVASQALSVAPGNVVPMDSIAAWLEHNGYNRSSTVREPGEYAVRGGILDLFPSNLDHPVRFDFFGDSLESIRSFDPETQRTLFDVRSLDLVPISEFQFVTERYPGMEHWLPLFHTLFDYLDGASISHIQALQAARKKVVVTLWSEGSRDRMASMLKDV---GIESGFETESVAVISEQDILGDLENFISEVTSLAAGDLVVHVEHGIGRFVGLQTLEVGGAPHDCLELRYANETKLFLPVENIELLSRYG-SDQANVELDRLGGGGWQARKAKLKSRIREIAGELIRIAAERHLREAPKLPVQSGLYDEFCARFPYEETEDQLGAIQASLEDLESGKPMDRLVCGDVGFGKTEVALRAAFAVALDGKQVAVVVPTTLLARQHAKTFTERFRGFPVNVAQASRLVSPKELAKVKKGIADGSVDIVVGTHALLGKSIKFRDLGLLVVDEEQHFGVSHKERLKQLRAHVHVLTLSATPIPRTLQLALTGVRDLSIIASPPVDRLAVRTFVAPHDPLMIREALLRERYRGGQAFYVVPRVSDLAEVKDFLDKHVPEMKVAVAHGQMPPTVIEDIISAFYDGKYDVLLSTTIVESGLDIPTANTLIVHRSDMFGLAQLYQLRGRVGRSKLRAYALFTLPSKHKITAQAERRLKVLQSLETLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQSMLEEAIENLKTGWSPQITIGMPVLIPEDYIADLAVRLSLYRRLADLDTDDEIDSFAAELRDRFGKLPDEVRYLFKVAAIKAYCRRANVEKVDAGPKGAVISFRD
>P637475800 NP_948005 RPA2663 transcription repair coupling factor [Rhodopseudomonas palustris CGA009]
NVAEGAEGLIIADLARSLTVICRDGPRMQQLARSLEFFAPDLEVLQFPAWDCQPYDRVSPHAGILAQRVTTLAKLLIVLTTVNAAVQRVPVREIIAAQALSVAPGNVVPMDSIVAWLEHNGYSRASTVREAGEYAVRGGILDLFPAGLDQPVRFDFFGDQLESIRTFDAETQRTLHTMRGLDLVPVSEFQLVTERHPGMEHWLPLFQTLFDYLKGTPVAHVYALQAARKKVVIALWSEGSRDRMASMLKDV---GLESGFETDAFAVITEQDVLGDLDNFISEVTSLSTGDIVVHVEHGIGRFVGLQTLEVGGAPHDCVELHYANDTKLFLPVENIELLSRYG-SDGTSVELDKLGGSGWQARKAKLKNRIRQIAGELIKVAAERHLREAPKLPIQPQLYDEFCARFPYDETEDQLAAINAALGDLEKGTPMDRLVCGDVGFGKTEVALRAAFAVALDGKQVAVVVPTTLLARQHAKTFTERFRGFPVNVGQASRLVSAKELSQVKKGIADGTTDIVVGTHALLGKSIKFKDLGLVIVDEEQHFGVTHKEKLKQLRSEVHVLTLSATPIPRTLQLAMTGVRDLSIIASPPVDRLAVRTFVAPHDPLMIREALLRERYRGGQAFYVVPRIDDLAEVKDFLDKHVPEMKVAVAHGQMPPAVIEDIMSAFYDGKFDILLSTTIVESGLDIPNANTLIVHRADMFGLAQLYQLRGRVGRSKLRAYALFTLPQHN-ITAQAERRLKVLQSLETLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAITNLKAGWSPQITIGMPVLIPDDFVADLSVRLSLYRRLADLDTDEEIDNFAAELRDRFGPLPDEVRYLFKIAAIKAYCRRANVEKVDAGPKGVVITFRD
>P642712819 YP_001991921 Rpal_2938 transcription-repair coupling factor [Rhodopseudomonas palustris TIE-1]
NVAEGAEGLIVADLARSLAVICRDGPRMQQLARSLEFFAPDLDVLQFPAWDCQPYDRVSPHAGILAQRVTTLAKLLIILTTVNAAVQRVPVREIVSAQALSVAPGNVVPMESIVAWLEHNGYSRASTVREAGEYAVRGGILDLFPAGLEQPVRFDFFGDQLESIRTFDAETQRTLHTMRGLDLVPVSEFQLVTERHPGMEHWLPLFQTLFDYLKGTPVAHVYALQAARKKVVIALWSEGSRDRMASMLKDV---GLESGFETDAFAVITEQDVLGDLDNFISEVTSLSTGDIVVHVEHGIGRFVGLQTLEVGGAPHDCVELHYANDTKLFLPVENIELLSRYG-SDGTSVELDKLGGSGWQARKAKLKNRIRQIAGELIKVAAERHLREAPKLPIQPQLYDEFCARFPYDETEDQLAAINAALGDLEKGTPMDRLVCGDVGFGKTEVALRAAFAVALDGKQVAVVVPTTLLARQHAKTFTERFRGFPVNVGQASRLVSTKELSQVKKGIADGTLDIVVGTHALLGKSIKFKDLGLVIVDEEQHFGVTHKEKLKQLRSEVHVLTLSATPIPRTLQLAMTGVRDLSIIASPPVDRLAVRTFVAPHDPLMIREALLRERYRGGQAFYVVPRIDDLAEVKDFLDKHVPEMKVAVAHGQMPPAVIEDIMSAFYDGKFDILLSTTIVESGLDIPNANTLIVHRADMFGLAQLYQLRGRVGRSKLRAYALFTLPQHN-ITAQAERRLKVLQSLETLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAITNLKAGWSPQITIGMPVLIPDDFVADLSVRLSLYRRLADLDTDEEIDNFAAELRDRFGPLPDEVRYLFKIAAIKAYCRRANVEKVDAGPKGVVITFRD
>P637372174 NP_771241 bll4601 transcription-repair coupling factor [Bradyrhizobium japonicum USDA 110]
NVAEGAEGLVISDLARSLAVVCRDGARMQQLERALQFFAPDLPVLTFPAWDCQPYDRVSPHGGILAQRLTTLARLLIVLTTVNAIVQRVPARELVAAQALSVAPGNVVPMDTIIAWLEHNGYNRSSTVREPGEYAVRGGILDLFPAGLDQPVRFDFFGDSLESIRSFDAETQRTLLDMRSLDLVPVSEFQLVTDRHPGMEHWLPLFQTLFDYLQGAVISHVMALQAQRKKVVITLWSEGSRDRMTSMLRDL---GLDSGFETDEIALISEQDILGDLDNFISEVTSLAAGDIVVHVDHGIGRFVGLQTLDVAGAPHDCLELHYAAETKLFLPVENIELLSRYG-SDQTTVELDRLGGSGWQTRKAKLKNRIREIADELIKIAAARHLHEAPKLPVQPGLYDEFCARFPYDETEDQLGAIESTLKDLELGRPMDRLICGDVGFGKTEVALRAAFAVALEGKQVAVVVPTTLLARQHARTFTERFKGFPVNVAQASRLIPTKELNQVKKGIADGSVDIVVGTHALLGKAIKFRDLGLVIVDEEQHFGVTHKERLKALRSEVHVLTLSATPIPRTLQLALTGVRELSIIASPPVDRLAVRTFVAPHDPLMIREALLRERYRGGQAFYVVPRIDDLAEVKDFLDKNVPEMKVAVAHGQMPPAVIEDIMTAFYDGKFDILLSTTIVESGLDIPNANTLIVHRADMFGLAQLYQLRGRVGRSKLRAYALFTLPAQQKITTQAERRLIVLQSLETLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQSMLEEAIVNLKAGWSPSITIGMPVLIPEDYVSDLSVRLSLYRRLADLDTEEEIENFGAEMRDRFGVLPDEVRYLFKVAAIKAFCRRANVEKIDAGPKGAVIAFRD
>P640558986 YP_001240124 BBta_4157 transcription repair coupling factor [Bradyrhizobium sp. BTAi1]
NVAEGAEGLVVSDLARSLAVVCRDGARMQQLARALDFFAPDLPVMQFPAWDCQPYDRVSPHGGILAQRVTTLARLLIVLTTVNAIVQRVPSRDTMAGQALSVAPGHVVPMNSVVAWLEHNGYVRSSTVRESGEYAVRGGILDLFPAGLDQPVRFDFFGDSLESIRTFDAETQRTLLDMRSLDLVPVSEFQLVTDRYPGMEHWLPLFHTLFDYLPNTPIAHVQALQSVRKKVVIALWSEGSRDRMASMLKDL---GLETGFETDQIAIISEQDILGDLDNFISEVTSLAIGDIVVHVDHGIGRFVGLQTLEVAGAPHDCLELRYAGETKLYLPVENIELLSRYG-SDQTSVELDKLGGSGWQTRKAKLKNRIREMAGELIKIAAERMLHEAPKLPVQAGLYDEFCARFPYDETEDQLTAIQATLADLEAGRPMDRLVCGDVGFGKTEVALRAAFAVALDGKQVAVVVPTTLLARQHAKTFTERFKGFPVNVAQASRLVSTKELNQVKKGLADGSVDIVVGTHALLGKSVKFRDLGLVIVDEEQHFGVGHKERLKQLRAEVHVLTLSATPIPRTLQLALTGVRELSIIASPPVDRLAVRTFVAPHDPVMIREALLRERYRGGQAFYVVPRIDDLAEVKEFLDKTVPEMKVAVAHGQMAPTVIEDIIGAFYDGKFDILLSTTIVESGLDIPRANTLIVHRADMFGLAQLYQLRGRVGRSKLRAYALFTLPSTHKISAQAEKRLGVLQSLETLGAGFQLASHDLDIRGAGNLLGDEQSGHIKEVGFELYQSMLEEAIENLKAIWSPQITIGMPVLIPEDYVSDLSVRLSLYRRLADLETDEEIENFAAELRDRFGKLPDETRYLFKVAAIKNYCRRANVEKVDAGPKGAVIAFRD
>P640521379 YP_001205767 BRADO3771 transcription repair coupling factor [Bradyrhizobium sp. ORS278]
NVAEGAEGLVVSDLARSLAVVCRDGNRMQQLARALDFFAPDLPVMQFPAWDCQPYDRVSPHGGILAQRVTTLARLLIVLTTVNAIVQRVPSRDTMAGQALSVAPGHVVPMDSVVAWLEHNGYVRASTVRESGEYAVRGGILDLFPAGLDQPVRFDYFGDSLESIRTFDAETQRTLLDMRSLDLVPVSEFQLVTDRYPGMEHWLPLFHTLFDYLPNTPIAHVQALQSVRKKVVIALWSEGSRDRMASMLKDL---GLETGFETDQIAVISEQDILGDLDNFISEVTSLAIGDIVVHVDHGIGRFVGLQTLEVAGAPHDCLELRYAGETKLYLPVENIELLSRYG-SDQTNVELDKLGGSGWQTRKAKLKNRIREMAGELIKIAAERMLHEAPKMPVQAGLYDEFCARFPYDETEDQLAAIQATLGDLEAGRPMDRLVCGDVGFGKTEVALRAAFAVALDGKQVAVVVPTTLLARQHAKTFTERFRGFPVNVAQASRLVSTKELNQVKKGLADGSVDIVVGTHALLGKTVKFRDLGLVIVDEEQHFGVSHKERLKQLRAEVHVLTLSATPIPRTLQLALTGVRELSIIASPPVDRLAVRTFVAPHDPVMIREALLRERYRGGQAFYVVPRIDDLAEVKEFLDKTVPEMKVAVAHGQMAPTVIEDIISAFYDGKFDILLSTTIVESGLDIPRANTLIVHRADMFGLAQLYQLRGRVGRSKLRAYALFTLPSTHKVSAQAEKRLGVLQSLETLGAGFQLASHDLDIRGAGNLLGDEQSGHIKEVGFELYQSMLEEAIENLKAGWSPQITIGMPVLIPEDYVSDLSVRLSLYRRLADLETDEEIENFAAELRDRFGKLPDETRYLFKVAAIKNYCRRANVEKVDAGPKGAVIAFRD
>CYANO309_C637797485 YP_397457 PMT9312_0961 transcription-repair coupling factor [Prochlorococcus marinus MIT 9312]
GSSRYAKSIILNSIAKNILLICPNTEIAYKWIGYFESIN-DKAVLYYPPTEHLPYASINKSKEIEFTQLTVLSKL-IVISTERSLQPHLINKNLLTENKLALQKGVQIELQDLANKLTLLGYTKENITSTEGYWSRRGEIIDIYPVNNEFPIRLEFFDNVIEKIREYDPHTQKTLENINNIEIIHAGFGLLIKDNKNNLDRYLGIIENIIDFIDKETIKDINKNIKNKEKVWILSAQPLR---TKTLLFEKNKNYEIEGFYLPIVVLITDKELFSQSVNSNINVNKISPGDFIVHKNHGIGKFLKIEKINITGDSRDYLVIQYQ-DGKISVAADQLGSVNRYRSSGKIKPKINKLGGTEWERIKDKNKKQIKKVAVDILKLYAKREKLKGHIYPEDGPWQDELEESFPYQPTPDQITAVKEIKSDMESDKPMDRLVCGDVGFGKTEVAVRAIFKAITSGKQVILLAPTTILAQQHWRTINNRFSPYPIKVSLLNRFKTVNERKEIYAGLKNNKIDLVVATHQILGKEIEIKNLGLLVIDEEQRFGVRQKEKIKKIKTNIDVLTLSATPIPRTLYMSLSGLRQMSLLNTPPPSRRSIKTYLSEIDMDVIRTAINQELDRGGQIFYVLPRISDIDQAVNKLKNMFPNLKFIIAHGQMNETELENSMISFNNGEVDLMICTTIIESGLDIPKVNTIIIEDSHKFGLSQLYQLRGRVGRSGIQAHAWLFYPNLNKINDSAKQRLKAIKDFSELGSGYQLAMKDMEIRGVGSLLGEEQSGKVNAIGYDLYIEMLHEAISEISG-SDTQIDLQINAFIPATWILNREEKLDAYKSATECSNNKELTELAKDWINRYGTLPKPVESLIMLMKLKLIAKKCGFNKIKK-KPNIIIETKL
>CYANO309_C640160615 YP_001091254 P9301_10301 Transcriptional-repair coupling factor [Prochlorococcus marinus MIT 9301]
GSSRYAKSIILNSIAKNILLICPNEEIAYKWIGYFESIN-NKAVLYYPPTEHLPYSSINKSKEIEFSQLTVLSKL-IVISTERSLQPHLVNKNLLIENKLNLQKGVQIEIKELANKLTLLGYTKENVTSSEGFWSRRGEIIDIYPVNNEFPVRLEFFDNVIEKIREYDPHTQKTLESINNIEIIQAGFDLLIKDNKNNLDRYLGIIENIIDFINKETINDINKNIKNNEKVWILSAQPLR---TRTLLFEKNKNYEIEGFSLPIVVLITDKELFSQSVNSNINVNKISPGDFIVHKNHGIGKFLKIEKINLTGDSRDYLVIQYQ-DGKISVAADQLGSVNRYRSSGKIKPKINKLGGTEWERIKDKNKKQIKKVAVDILKLYAKREKLKGHIYPEDGPWQDELEESFPYQPTPDQITAVKEIKSDMESDKPMDRLVCGDVGFGKTEVAVRAIFKAITSGKQVIFLAPTTILAQQHWRTINNRFSPYPIKVSLLNRFKSINERREIYAGLKNNKIDLVVATHQILGKEIEIKNLGLLVIDEEQRFGVRQKEKIKKIKTNIDVLTLSATPIPRTLYMSLSGLRQMSLLNTPPPSRRSIKTYLSEIDMDVIRTAINKELDRGGQIFYVLPRISDIDQAIDKLKNMIPNLKFIVAHGQMNETELENAMIAFNNGEVDLMICTTIIESGLDIPKVNTIIIEDSHKFGLSQLYQLRGRVGRSGVQAHAWLFYPNINKINDAAKQRLKAIKDFSELGSGYQLAMKDMEIRGVGSLLGEEQSGKVNAIGYDLYIEMLHEAISEISG-NDTQIDLPINAFIPATWILNREEKLEAYKSATECSNNYELTELATDWVNRYGNLPKPVESLIMIMRLKLLAKKCGFNKIKK-KPNILIETKL
>CYANO309_C640078745 YP_001009421 A9601_10301 Transcriptional-repair coupling factor [Prochlorococcus marinus AS9601]
GSSRYAKSIILDSIAKNILLICPNVEIAYKWIGYFESIN-DKAVLYYPPKEHLPYSSINKSKEIEFSQLTVLSKL-IVISTERSLQPHLINKNLLIENKLNLQKGVQIEIQELANKLSLLGYTKDNVTSTEGFWSRRGEIIDIYPVNNEFPIRLEFFDNVIEKIREYDPHTQKTLESINNIEIIQAGFNLLIKDNKNNLDRYLGIIENIIDFIDRETINDINKNIKNNEKVWILSAQPLR---TRTLLFEKNKNYEIEGFYLPIVVLITDKELFSQSVNSNINVNKISPGDFIVHKNHGIGKFLKIEKINITGDSRDYLVIQYQ-DGKISVAADQLGSVNRYRSSGKIKPKINKLGGTEWERIKDKNKKQIKKVAVDILKLYAKREKLKGYIYPEDGPWQDELEESFPYQPTPDQITAVEEIKSDMESEKPMDRLVCGDVGFGKTEVAVRAIFKAITSGKQVILLAPTTILAQQHWRTISNRFSPYPIKVSLLNRFKTVNERKEIYAGLKNNKIDLVVATHQILGKEIEIKNLGLLVIDEEQRFGVRQKEKIKKIKTSIDVLTLSATPIPRTLYMSLSGLRQMSLLNTPPPSRRSIKTYLAEIDMDVIRTAINQELDRGGQIFYVLPRISDINQALNKLKNIFPSLKFIVAHGQMNETELENAMIAFNNGEVDLMICTTIIESGLDIPKVNTIIIEDSHKFGLSQLYQLRGRVGRSSVQAHAWLFYPDINKINDAAKQRLKAIKDFSELGSGYQLAMKDMEIRGVGSLLGEEQSGKVNAIGYDLYIEMLHEAISEISG-NDTQIDLPINAFIPATWILNREEKLEAYKSATECSKNDELTELATDWVNRYGNLPKPVESLIMIMRLKLLAKKCGFSKIKK-KPNILIETKL
>CYANO309_C640943670 YP_001484263 P9215_10621 Transcriptional-repair coupling factor [Prochlorococcus marinus MIT 9215]
GSSRYAKSIIIASIAKNILLICPNVEIAYKWIGYFESIN-DKAVLYYPPTEHLPYASINKSKEIEFSQLTVLSKL-IIISTERSLQPHLINKNLLIENKLDLQKGVRIEIQELANKLTMLGYKKDNVTSTEGFWSRRGEIIDIYPVNNEFPVRLEFFDNIIEKIREYDPHTQKTLESINNIEIIQAGVDLLIRENKNNLDRYLGIIENIIDFLNKETINDINKNIKNNEKVWILSAQPLR---TRTLLFEKNKNYEIEGFYLPIVVLITDKELFSQSVNSNINVNKISPGDFIVHKNHGIGKFLKIEKINITGDSRDYLVIQYQ-DGKISVAADQLGSVNRYRSSGKIKPKINKLGGTEWERIKDKNKKQIKKVAVDILKLYAKREKLKGYIYPEDGPWQDELEESFPYQPTPDQITAVEEIKSDMESDKPMDRLVCGDVGFGKTEVAVRAIFKAITSGKQVILLAPTTILAQQHWRTINNRFSPYPIKVSLLNRFKTVNERKEIYAGLKNNKIDLVVATHQILGKEIEIKNLGLLVIDEEQRFGVRQKEKIKKIKTNIDVLTLSATPIPRTLYMSLSGLRQMSLLNTPPPSRRSIKTYLSEIDMDVIRTAINQELDRGGQIFYVLPRISDIDQAVNKLKIMFPSLKFIVAHGQMNETDLENAMIAFNNGEVDLMICTTIIESGLDIPKVNTIIIEDSHKFGLSQLYQLRGRVGRSGVQAHAWLFYPNINKINDAAKQRLKAIKDFSELGSGYQLAMKDMEIRGVGSLLGEEQSGKVNAIGYDLYIEMLHEAISEISG-NDTQIDLPINAFIPATWILNREEKLEAYKSATECSNNDELTELATDWVNRYGNLPKPVESLIMIMRLKLLAKKCGFNKIKK-KPNIVIETKL
>CYANO309_C640080593 YP_001011229 P9515_09151 Transcriptional-repair coupling factor [Prochlorococcus marinus MIT 9515]
GSSRYAKSIIINSLAKNIILVSPNEEIAYKWYGYFNSIG-NRNILYYPPSKNLPYGSINKSKETEYSQLSVISKL-IIITTERSLQPHLIKKNIFKQKIITLNKGLAIEIKELTSQLVSLGYNKENLTSQEGSWSRRGEIIDIYPVNNELPIRIEFFDNIIDKIREYDPVTQRTLDSINKVEIVQVGYNSLIRETKNNLDRYLGIIENLINYINEDSIKEINKFILNKDKVWILSAQPLR---TRSLLFEKNKNYEIEGFYLPIIILITDKELFSQSVNSNINVNKINPGDYIVHKNHGIGQFLKLEKINITGESRDYLVIKYL-DGKISVAADQLGSINRYRSTGKIMPKINKLGGAEWLKIKDKNRKIIKKVAYDILKLYAKREKLKGHIYPEDGPWQKELEESFPYQPTPDQLTAVKEIKIDMESDKPMDRLVCGDVGFGKTEVAVRAIFKAITSGKQVILLAPTTILAQQHWRTFNNRFSPYPIKVSLLNRFKTSSEKKDIYAGLKNNKIDLVVATHQILGKEIEIKNLGLLVIDEEQRFGVRQKEKIKNIKTNIDVLTLSATPIPRTLYMSLSGLRQMSLLNTPPPSRRSIKTYLSEIDMDVIRTAISQELDRGGQIFYVLPRISDIDQAVNKLTNMFNDLKFIVAHGQMNEIDLENAMIAFNNGEVDLMICTTIIESGLDIPKVNTIIIEDSHKFGLSQLYQLRGRVGRSGIQAHAWLFYPNLNNINEASKQRLKAIKDFSELGSGYQLAMKDMEIRGVGSLLGEEQSGKVNAIGYDLYIEMLHEAISEING-KDTQVDLPINAFIPATWILNREEKLDAYKEATECNTHKELTELATDWSNRYGVLPKPVESLILLMKLKLLAKKCGFNKIKK-KPNIIIETRL
>CYANO309_C637449849 NP_892957 PMM0839 Transcriptional-repair coupling factor [Prochlorococcus marinus pastoris CCMP1986]
GSSRYAKSIIINSIANDILLISPNEEIAYKWYGYFDSID-NRNVLYYPPSENLPYASINRSKETEYSQLSVISKI-IIITTERSLQPHLIKINQFKENIFTLIKGNELDIKELTKKLVLLGYNKENLTSQEGSWSRRGEIIDIYPVNNELPVRIEYFDNIIDKIREYDPVSQRTLDSVNKVEIVQVGFNLLIRKTKNNLDRYLGVIENLLDYINKETLKEINKFILNKDKVWILSAQPLR---TKSLFFEKNKNYEIEGFYLPIVILITDKELFSQSVNSNINVNKINPGDYIVHKNHGIGQFLKIEKINITGESRDYLVIRYL-DGKISVAADQLGSINRYRSSGKIKPRINKLGGTEWLKIKDKNRKIIKKVALDILKLYAKREKLKGHIFPEDGPWQKELEESFPYQATPDQITAVKEVKIDMESDKPMDRLVCGDVGFGKTEVAVRAIFKAITSGKQVILLAPTTILAQQHWRTFYNRFSPYPIKVSLLNRFKTNTEKKDIYNGLKNNKIDLVVATHQILGKEIEIKNLGLLVIDEEQRFGVRQKEKIKNIKTNIDVLTLSATPIPRTLYMSLSGLRQMSLLNTPPPSRRSIKTYLSEIDMDVIRTAISQELDRGGQIFYVLPRISDIDQAVNKLKNMFKDLKYIVAHGQMNEIDLENAMIAFNNGEVDLMICTTIIESGLDIPRVNTIVIEDSHKFGLSQLYQLRGRVGRSGIQAHAWLFYPNINKINEASKQRLKAIKDFSELGSGYQLAMKDMEIRGVGSLLGEEQSGKVNAIGYDLYIEMLHEAISEIN-GNDTQVDLPINAFIPGTWILNREEKLDAYKYATECTNHKELTELATDWTNRYGVLPKPVESLILLMKLKLLAKKCGFNKIKLKKPNVIIETRL
>CYANO309_C637441421 NP_875392 Pro1000 Transcription-repair coupling factor [Prochlorococcus marinus marinus CCMP1375]
GGSTSAKAITISSLALPVLVIVPTLEEASRWNSIMQILG-WNKVLLYPSSEVSPYESIEISKEIEWAQLSVLSEL-AIICTERALQPHLPRPELMLENSVSIIKGNELNLDNLSRNLIKIGYEKTTTTEQEGTWSRRGDIIDIFAVNNELPIRIELFGDNIDKIREFDPINQRSLDEINNIRISPVSINKITFNIEGTIEELLEITQTLMNYIHKDSLELIREFQKKKYSIWLLSAQPSR---ASALLEEKLHGIDIEGVDLSQVLLLTDKELFGQSSSRSVNPNKLKSGDYVVHRNHGVGKFLKIEKFIVNNESRDYLLVQYS-DGTLRVAADQLSSLGRYRNSSDKSPRINKLGGNTWTKAKERAKKSISRVAIDLIKLYAERSNSQGFSFPKDGPWQRELEEAFPYEATPDQIKAVSEIKSDMEKSFPMDRLVCGDVGFGKTEVAIRALFKAITAGKQVAILAPTTVLAQQHWRTLTDRFAPYPIKVSLLNRFKSSSEKKEIAKSLKNGTIDAIVGTHLLLSKNIEYKDLGLLVVDEEQRFGVNQKEKIKSLKKNIDVLTLTATPIPRTLYMSLSGVREMSLITTPPPQRRAIKTHLVSKENEIIRSAICQEIGRGGQIFYVVPRIEGIEEVATEIKQMVPNIKLIIAHGQMNEGELENAMIAFNAGEADLMLCTTIIESGLDIPRVNTILIEDAHKFGLSQLYQLRGRVGRSGVQAHAWLFFPQDKEVTNNASQRLKAIQEFSELGSGYQLAMRDMEIRGVGNLIGIQQSGQMEIIGFDLYMEILHESIAEIQG-EETKVDLPITAFIPNTWIKSNEEKLTAYKQASECSTIDKLLELTAIWIDRYGVLPAPVEALILIMKLKIKSKACGFSRIRN-KPNIVLETMM
>CYANO309_C641285293 YP_001550812 P9211_09271 Transcriptional-repair coupling factor [Prochlorococcus marinus MIT 9211]
GGSKTAKTIISTTISKPLIVIVPTLEETTRWYSILNNFS-WDSLYIYPTSENSPYESIPPTTEILWGQLQVLTEL-AIVTTERALQPHLPPKDSFLTSCLSLVKENIFDLDKLAINLTNLGYSKTTTTEEEGQWSRRGDILDIYPVNYESPIRLEFYGDNIDKIKEFDPVSQRSLDEINQVIISPVNFDILIANIPSGIRRYLGLAWSLIDFIDNSSLEMLKKYQNDKFKIFIYSAQPSR---TSSLLNERSSSFDLEGINFLPILLLTDKEFYGQSASKSIDHNKLRTGDYVVHRNHGIGKFIKIEKFVISQESRDYLLVQYQ-DGTLRVAADQLGSLGRYRSSSDKSPRIGKLGGTAWLNAKEKARKSINKVAIDLIRLYAERNKTEGYSFPPDAPWQSELEDAFQYEPTHDQLTAIKDVKNDMEKPKPMDRLVCGDVGYGKTEVAIRALFKAIISGKQAALLAPTTILSQQHWRTLSDRFAPYPIKIALLNRFKTSREKNAIVEELKSGTIDLVVGTHLILSNKVCFKDLGLLVVDEEQRFGVKQKERIKQFKKNIDVLTLTATPIPRTLYMSLSGVREMSLITTPPPLRRAIKTHLIPYEEEAIRSAICQEIDRGGQIFYVVPRIEGITDIATKLSNMIPKIRILIAHGQMDEGELESSMIAFNDWEADLMLCTTIVESGLDIPRVNTILIEDAQQFGLSQLYQLRGRVGRSGVQAHAWLLYPSNTTINDKAKQRLQAIQEFSQLGSGYQLSMRDMEIRGVGNLIGLQQSGQMEAIGFDMYMEMLQECISDLEG-DETLIDLPINAFIPGNWIVDNQEKISAYKAATDCHTSGKLIELGLAWSDRYGALPKPVSSLMQVMQIKLVGKSLGFSRIRI-KPNIILETKM
>CYANO309_C640084330 YP_001014874 NATL1_10511 Transcriptional-repair coupling factor [Prochlorococcus marinus NATL1A]
GASRTAKALITTSLAKRLLVIVPTLEEATRWYPLVKDCG-WTKTCLYPTSEVSPYETTQVTSEIIWGQLQVLSDI-AIIATERSLQPHLPPFEYLKEKCIKLNVGDEINLSDLSLKLSESGYIKSNNIDQEGTWTRRGDIIDIYPVSSELPIRLELFGDLLDKIKEFDPISQRSLDQINNVCITPTGFDPLIINKLDSAKKYLGVAFSLLDYLDDKTFLSLKDYIKDKYSIWIISAQPSR---AVSLLEEKNKNGEIEGFYLPAIALLTDKEFFGQSQSKKIDPNKMKPGDYVVHRNHGIGLFQKIEKLNINGESRDYLVIKYM-DGKLSVAADQLGSLGRYRSSNAKTPTISKLGGANWNKIKEKAKKSVKKVAIDLIKLYAERSKEKGYKFPCDGPWQSELEDSFPYALTPDQATATSQVKSDMESEKPMDRLVCGDVGFGKTEVAIRAIFKAITSGKQIALLAPTTVLSQQHWRTISDRFAPYPIKVSLLNRFKTNSEKKHIVSGLKAGQIDAVVGTHQLLNKKLVYKDLGLLVIDEEQRFGVNQKEKIKELKKSVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPLRRPIKTHLAPLDNEIIRSAISQEIDRGGQIFYIVPRIKGIEDVAEKLKIMIPNVKLLIAHGQMEEGALENAMLAFNAGEADILLCTTIVESGLDIPRVNTILIEDSHKFGLSQLYQLRGRVGRSGVQAHAWLFYPSDEKLNETSRQRLKAIKEFSDLGSGYQLAMRDMEIRGVGNILGIEQSGQMETIGFDLYMELLQETIAEIQ--DDTQIDLPVTAFIPGDWITDPDEKINAYRLATQCENNDSLVQFASNLVDRYGTLPKAVESLIEVMKLKIIAKKCGFSRIKLSKPNVELTMMD
>CYANO309_C637687229 YP_291564 PMN2A_0369 transcription-repair coupling factor [Prochlorococcus marinus NATL2A]
GASRTAKALITTSLAKRLLVIVPTLEDATRWYPLVKDCG-WTKTCLYPTSEVSPYETTQVTSEIIWGQLQVLSDI-AIIATERSLQPHLPPFEHLREKCIKLNVGDEINLSDLSLKLSESGYIKSNNIDQEGTWTRRGDIIDIYPVSSELPIRLELFGDLLDKIKEFDPISQRSLDQINNVCITPTGFDPLIINKLDSAKKYLGVAFSLLDYLDDKTFLSLKDYIKNKYSIWIISAQPSR---AVSLLEEKNKNGEIEGFYLPAIALLTDKEFFGQSQSKKIDPNKMKPGDYVVHRNHGIGLFQKIEKLNINGESRDYLVIKYM-DGKLSVAADQLGSLGRYRSSNAKTPTISKLGGANWNKIKEKAKKSVKKVAIDLIKLYAERSKEKGYKFPCDGPWQNELEDSFPYALTPDQATATSQVKSDMESEKPMDRLVCGDVGFGKTEVAIRAIFKAITSGKQIALLAPTTVLSQQHWRTISDRFAPYPIKVSLLNRFKTNSEKKHIVSGLKDGQIDAVVGTHQLLNKKLVYKDLGLLVIDEEQRFGVNQKEKIKELKKSVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPLRRPIKTHLAPLDNEIIRSAISQEIDRGGQIFYIVPRIKGIEDVAEKLKIMIPNVKLLIAHGQMEEGALENAMLAFNAGEADILLCTTIVESGLDIPRVNTILIEDSHKFGLSQLYQLRGRVGRSGVQAHAWLFYPSDEKLNETSRQRLKAIKEFSDLGSGYQLAMRDMEIRGVGNILGIEQSGQMETIGFDLYMELLQETIAEIQ--DDTQIDLPVTAFIPGDWITDPDEKINAYRLATQCENNDSLVQFASNLVDRYGTLPKAVESLIEVMKLKIIAKKCGFSRIKLSKPNVELTMMD
>CYANO309_C637461252 NP_926783 gll3837 transcription-repair coupling factor [Gloeobacter violaceus PCC 7421]
GGNRVARGIAASALARPLLVVTANLEEAARWSAQLEAMG-WGSVYLYPSSEATPYEPFDPEEEVTWGQLQVLAEL-AIVCTSRALHPHLPPPEYLAEYCLSLEAGAGLSIEKLTGELVRLGYLRVPQVEAEGQFSRRGDILDFFPVSAEIPVRAEWFGDELERLREFDPATQRSLDAVQQVAITPVGFGPVVLPAPEGLRRWLGLAFSLVDYLPDALTEHLRQYRAQGLQIWMLSAQPSR---AVALLGDKYSGAEMEGSILATVVLVTDREFFGQAASKQIDLDKLNPGDFVVHRSHGIGRFAKLEKLTVSGSAREYLVIEYA-DGILRVAADQMNSLSRYRSTGGTV-QLSRMGSKSWEKTKQKVKKAIQKIAFDLLDLYARRAQESRIPFPPDQPWQREMEESFPYPLTPDQARAIQEVKIDMESERPMDRLVCGDVGFGKTEVAIRAAFKALTSGVQCAVLVPTTVLASQHYHTFKERFAPYPISIGLLNRFRTASEKKDLLARLATGELDLVIGTHQLLGAGVRFQNLGLLVIDEEQRFGVAQKEKIKTLKTQVDVLTLTATPIPRTLYMSLSGVREMSLITTPPPSRRPIKTHLAPYDPEHVRTAILQELGRGGQIFYVYNRIEDIQDVAARLQAMIPTARVCVGHGQMEEGELESTMLAFSGGEFDILVCTTIIESGLDIPRVNTILVENAHQFGLSQLYQLRGRVGRSGVQAHAWMFYKQEEALTDEARKRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQLNAIGFDLYMELLEEAIQEIRGREDTQIDLRVTAFIPADYIPDLEQKMRAYRQVAAAPDRAQLQAAALEWTERYGPVPPAAQQLLRVMELKQVARALGFARIR--PEGTNIVLET
>CYANO309_C640086946 YP_001017448 P9303_14371 Transcriptional-repair coupling factor [Prochlorococcus marinus MIT 9303]
GAGRVGRALIASAIARPLVVIVPTLEEANRWSSLLALMG-WSHNHLYPTSEGSPYEPFDPTTEIVWGQLQVLSELRAIVATERALQPHLPPVEALASQCEILSRGENIDLESLASTLTKLGYDRVTAVDQEATWSRRGDIVDIFPVSSELPVRLELFGDELDKLREFDPVTQRSLDEVNELCLTPSGFSPLIAHTPDGIRRLMGIAWSLLDYIPANSFEQIKNYQKAHHPVWLLSAQPSR---AVALLEEKTSGVDLEGLILPAVVLMTDHEFFGQAASRTVDPNKMCSGDFVVHRNHGIGRFLKLEKLAISGEVRDYLVIQYL-DGTLSVAADQLGSLGRYRSTSESPPKLNRMGGTAWQKIKERTRKLVRKVAMDLVKLYAERLQAPGYAFPPDGPWQIELEESFPYEPTPDQVKAVVDVKRDMEAAQPMDRLVCGDVGFGKTEVAIRAIFKAITSGRQIAMLAPTTVLAQQHWRTLSDRFAPYPIKVALLNRFRTSSERKSILNGLKEGTIDAVVGTHQLLSKNTTFQKLGLLVVDEEQRFGVNQKEKIKVLRKDVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPLRRPIKTHLAAFDEEAVRSSIRQELDRGGQVFYVVPRVEGIEDVASQLQQMLPDLKLLVAHGQMAEGELESSMVAFNAGEADLMLCTTIVESGLDIPRVNTILIEDAHKFGLAQLYQLRGRVGRSGVQAHAWLFYPGDASLSDAARQRLRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVEQSGQMETIGFDLYMEMLQESLAEIQG-DDTQIDLPVTAFVPAEWIVDGDEKIAAYRAAANCASHESLIELAASWTDRYGAIPGPVQSLLQLMELKLLARRCGISRIKE-KPNIAMETPM
>CYANO309_C637447465 NP_894607 PMT0775 Transcriptional-repair coupling factor [Prochlorococcus marinus MIT 9313]
GAGRVGRALIASAIARPLVVIVPTLEEANRWSSLLAMMG-WSHNHLYPTSEGSPYEPFDPTTEIVWGQLQVLSELRAIVATERALQPHLPPVDALASQCEILCRGEHIDLESLANTLSKLGYDRVTTVDQEATWSRRGDIVDIFPVSSELPVRLELFGDELDKLKEFDPISQRSLDEVNELCLTPSGFSPLIAHTPDGIRRLMGIAWSLLDYIPANSFEQIKNYQKEHHPVWLLSAQPSR---AVALLEEKTTGVDLEGLILPAVVLMTDREFFGQAASRTVDPNKMCSGDFVVHRNHGIGRFLKLEKLAISGEVRDYLVIEYL-DGTLSVAADQLGSLGRYRSTSESPPKLNRMGGTTWQKVKERTRKLVRKVAMDLVKLYAERLQAPGYAFPPDGPWQIELEESFPYEPTPDQVKAVVDVKRDMEAAQPMDRLVCGDVGFGKTEVAIRAIFKAITSGRQIAMLAPTTVLAQQHWRTLSDRFAPYPIKVALLNRFRTSSERKSILNGLKEGTIDAVVGTHQLLSKNTTFQKLGLLVVDEEQRFGVNQKEKIKALRKDVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPLRRPIKTHLAAFDEEAVRSSIRQELDRGGQVFYVVPRVEGIEDVARQLQQMLPDLKLLVAHGQMAEGELESSMVAFNAGEADLMLCTTIVESGLDIPRVNTILIEDAHKFGLAQLYQLRGRVGRSGVQAHAWLFYPGDASLSDTARQRLRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVEQSGQMETIGFDLYMEMLQESLAEIQG-DDTQIDLPVTAFVPAEWIVDGDEKIAAYRAAANCASHESLIELAASWTDRYGAIPGPVQSLLQLMELKLLARRCGISRIKE-KPNIAMETPM
>CYANO309_C640546410 YP_001227721 SynRCC307_1465 Transcription-repair coupling factor [Synechococcus sp. RCC307]
GASRGARALLASAMARPLLVVVPTLEEAGRWAALLELMG-WPTTQLYPTSEGSPYEAFDPTSEITWGQLQVLSELGVIVATERALQPHLPPPAVLADQCLTLRKGASIDLEELAANLARLGYERVSTIEQEGSWSRRGDIVDLFPVSAELPVRLEFFGEDLEKLREFDPATQRSLDAVDLVRITPTGYGPLVADTPEGMRRLMGLAWSLLDYLPEHTLGLIKDFQREKTRVWLLSAQPSR---AVALLEEKTKGAELEGLQLPALALITDREFFGQAASRTVDPNRMRQGDFVVHRNHGIGRFLKMEKLAISGDARDYLVVQYL-DGLLRVAADQLGSLGRFRASSDAPPQLNKMGGAAWAKTKARARKAVRKVAFDLVKLYAERTESPGFAFPVDGPWQNELEDSFPYEPTPDQLKAITEVKRDMEQGKPMDRLVCGDVGFGKTEVALRAIFKAVTAGRQTALLAPTTVLAQQHWRTLSERFAPYPIKVALLNRFRTASERKEILKGLSDGAIDVVVGTHQLLGKGTSFKQLGLLVVDEEQRFGVNQKEKIKVLRKDVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPLRRPIKTHLASLDEEAVRSAIRQELDRGGQVFYVVPRVEGIEEVAGGLRQMLPGLRLLVAHGQMPEGELESAMVAFNAGEADVMLCTTIVESGLDIPRVNTILIEDSQKFGLSQLYQLRGRVGRSGIQAHAWLFYPGDASLSDAARQRLRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVEQSGQMETIGFDLYMEMLQEELAEIRG-DDTQIDLSVTAFIPADWVTEADEKMAAYRAAADCDSREGLLQLAADWVDRYGPLPAPVQSLLQLMEIKLLAKRCGFSRIKE-KPNLVLETPM
>CYANO309_C638115267 YP_730883 sync_1679 transcription-repair coupling factor [Synechococcus sp. CC9311]
GAGRAARALVASALARPLLVVVPTLEEAGRWTALLELMG-WSRAQLYPTSEGSPYEPFDSTTEITWGQLQVLSEL-AIVATERCLQPHLPPPQTLAEHCRALKKGDLVDLEELSTYLSQLGYERVSTIDQEGTWSRRGDIVDVYPVSSELPVRLEFFGNELDKLREFDPASQRSLDAVDTLKLTPTGFSPLIAETPEGMRRLMGLAWSLLDYLPAECCELIKQHQRERQAVWLLSAQPSR---AVALLEEKTRGAELEGLQLPAVVLLTDREFFGQAASRTVDPNKMQQGDFVVHRNHGIGRFKKLEKLAISGEVRDYLVVQYS-DGILRVAADQLGSLGRFRANSDTPPQLSKMGGSAWVKAKERATKAVRKVALDLVKLYAERHQAAGFAFPIDGPWQVELEDSFPYEPTSDQLKATVDVKRDMEKPEPMDRLVCGDVGFGKTEVAIRAIFKAITAGKQVAMLAPTTVLAQQHWRTLSERFAPYPIKVALLNRFRTAGERKTILEELKTGTIDAVVGTHQLLSKNTAFDKLGLLVVDEEQRFGVNQKEKIKALRKDVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPLRRPIKTHLAALDDEAVRSSIRQELDRGGQVFYVVPRVEGIEEVAGKLREMLPGLKLLVAHGQMAEGELESAMVAFNGGEADVMLCTTIVESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRSGVQAHAWLFYPGDASLSEAARQRLRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVEQSGQMEAIGFDLYMEMLQESLAEIQ-GDDTQVDLQVTAFIPADWIVDADEKMSAYRAASECLSSEALVELAAGWADRYGALPGPVQSLLQLMELKLLAKRCGFARIR--PEKPNIAFET
>CYANO309_C640543839 YP_001225203 SynWH7803_1480 Transcription-repair coupling factor [Synechococcus sp. WH 7803]
GAGRAARALVASAMARPLLVVVPTLEEAGRWTALLELMG-WRSAQLYPTSEGSPYEPFDPTSEITWGQLQVLSEL-AIVATERCLQPHLPPPQVLADRCRTLRKGDSIDLEALAVSLSQLGYERVSTIDQEGTWSRRGDIVDVFPVSSELPVRLEFFGDELDKLREFDPASQRSLDPIDSLRLTPTGFSPLIAETPEGMRRLLGLAWSLLDYLPAACCELIKGYQQQKQAVWLLSAQPSR---AVALLEEKTRGADLEGLQLPAVVLITDREFFGQAASRTVDPNKMRPGDFVVHRNHGIGRFQKLEKLAISGEVRDYLVVQYA-DGILRVAADQLGSLGRYRANSDAPPQLSKMGGSAWVKAKERASKALRKVALDLVKLYAERHQAPGFAFPVDGPWQSELEESFPYEPTPDQLKATAEVKKDMEKSQPMDRLVCGDVGFGKTEVAIRAIFKAITAGRQVAMLAPTTVLAQQHWRTLSERFAPYPIKVALLNRFRTAGERKSILEGLKKGTIDAVVGTHQLLSKSTAFDKLGLLVVDEEQRFGVNQKEKIKALRKDVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPLRRPIKTHLAALDEEAIRSAIRQELDRGGQVFYVVPRVEGIEDVAAQLRQMLPGLKLLVAHGQMAEGELESAMVAFNGGEADVMLCTTIVESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRSGIQAHAWLFYPGNASLSEAARQRLRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVEQSGQMEAIGFDLYMEMLQESLAEIQ-GDDTQVDLQVTAFIPADWITDADEKMAAYRAAAECLSGDELVELAALWADRYGALPGPVQSLLQLMNLKLLAKRCGFSRIR--PEKPNIALET
>CYANO309_C637771356 YP_377184 Syncc9902_1176 Transcription-repair coupling factor [Synechococcus sp. CC9902]
GAGRNCRALIASAMAQPLLVVVPTLEEAGRWTALLELMG-WSLASLYPTSEGSPYEPFDPTSEIIWGQLQVLSDL-AIVATERCLQPHLPPPDALKATCRVLTRGDEVELESLAETLAKLGYERVSTIDQEGTWSRRGDIVDIFSVSSELPVRLEFFGEELVKLREFDPSTQRSLDPIDQLRLTPTGFNPLIADTPEGMRRLMGLAWSLLDYLPDVTTELIKGFQRDRMSVWLISAQPSR---AVALLEEKAKGAELEGVLLPAVALVTDREFFGQAASRTVDPNKMRPGDFVVHRNHGIGRFKAMDKLALSGDVRDYLVVQYA-DGILRVAADQLGSLGRYRATSESPPQLSRMGGAAWTKAKDRAKKAVRKVALDLVKLYAERQQSNGFAFPPDGPWQTELEESFPYEPTPDQLKSTTDVKRDMERAEPMDRLVCGDVGFGKTEVAIRAIFKAITAGKQVAMLAPTTVLAQQHWRTLSERFAPYPIKVALLNRFRTTTERKSILEGLKQGTIDAVVGTHQLLSKSTSFQQLGLLVVDEEQRFGVNQKEKIKVLRKDVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPLRRPIKTHLASLDPEAVRSAIRQELDRGGQVFYVVPRVEGIEDVANGLRTMLPGLKLLVAHGQMAEGELESAMVAFNAGEADVMLCTTIVESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRSGIQAHAWLFYPGNASLSDNARQRLRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVEQSGQMETIGFDLYMEMLQESLAEIQ-GDDTQVDLPVTAFVPADWITDPDEKIAAYRAAADCTSSEALVELAAGWADRFGAIPAAVQSLLQLMELKMLAKRCGFSRIKPEKPNIVLETPM
>CYANO309_C637775890 YP_381609 Syncc9605_1300 transcription-repair coupling factor [Synechococcus sp. CC9605]
GAGRCSRALVASALAQPLLVVVPTLEEAGRWTALLELMG-WSQAGLYPTSEGSPYEPFDPTSEITWGQLQVLSDL-AIVATERCLQPHLPPPDVLKTKTRTLRKGDQVDLEALGETLAQLGYERVNTIEQEGSWSRRGDIVDIFPVSSELPVRLEFFGEELDKLREFDPASQRSLDPVDALRLTPTGFGPLIADTPEGMRRLMGLAWSLLDYLPDTTTELIKGFQTERTAVWLVSAQPSR---AVALLEEKVRGAELEGLQLPAIALVTDREFFGQAASRTVDPNKMRPGDFVVHRNHGIGRFKAMEKLAMSGDIRDYLVVQYA-DGILRVAADQLGSLGRYRATSETPPQLNRMGGTAWNKAKERAKKAVRKVALDLVKLYAERQQAAGFAFPTDGPWQVEMEESFPYDPTPDQLKATADVKRDMERQEPMDRLVCGDVGFGKTEVAIRAIFKAITAGKQVAMLAPTTVLAQQHWRTLSERFAPYPIKVALLNRFRTASERKSILDGLKQGTIDAVVGTHQLLSKGASFQELGLLVVDEEQRFGVNQKEKIKVLRKDVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPLRRPIKTHLASLDPEAMRSAIRQELDRGGQVFYVVPRVEGIEEVAAGLREMLPGLKLLVAHGQMAEGELENAMVAFNAGEADVMLCTTIVESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRSGIQAHAWLFYPGNASLSDTARQRLRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVQQSGQMETIGFDLYMEMLQESLAEIQ-GEDTQVDLPVTAFVPADWITDPDEKIAAYRAAADCLTAEALVELAAGWADRYGALPAAVVSLLQLMELKLLAKRCGFSRIKPEKPNIVLETPM
>CYANO309_C637445289 NP_897270 SYNW1177 Transcriptional-repair coupling factor [Synechococcus sp. WH 8102]
GAGRISRALVASALAQPLLLVVPTLEEAGRWTALLELMG-WSSASLYPTSEGSPYEPFDPTSEIIWGQLQVLSDL-AIVATERCLQPHLPPRQALEATCRTLKKGDELDLDELAETLARLGYERMSTIDQEGTWSRRGDIVDIYPVSSELPVRLEFFGEELDKLREFDPATQRSLDPVDRLQLTPTGFSPLVADTPEGLRRLMGLAWCLLDYLPASAAELIKGFQKEKTAVWLISAQPSR---AVALLEEKSAGAELEGLQLPALALVTDREFFGQAASRTVDPNKMRPGDFVVHRNHGIGRFKAMEKLAVSGDVRDYLVVQYA-DGLLRVAADQLGSLGRYRATSETPPQLSKMGGAAWTKAKERAKKAVRKVAMDLVKLYAERHQANGFAFPSDGPWQNELEESFPYEPTPDQLKATADVKRDMEKAEPMDRLVCGDVGFGKTEVAIRAIFKAITAGKQVAMLAPTTVLAQQHWRTLSERFAPYPIKVALLNRFRTASERKTILEGLKGGTIDAVVGTHQLLGKGASFQQLGLLVVDEEQRFGVNQKEKIKVLRKDVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPLRRPIKTHLAALDPEAVRSAIRQELDRGGQVFYVVPRVEGIEDVAAGLREMLPGLKLLVAHGQMAEGELESAMVAFNAGEADVMLCTTIVESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRSGIQAHAWLFYPGNGSLSDNARQRLRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVEQSGQMETIGFDLYMEMLQESLAEIQ-GDDTQVDLPVTAFVPADWITDPDEKIAAYRAAADCRSGEALVELAAGWADRYGALPAAVQSLLQLMELKLLAKRCGVARIKPEKPNIVLETPM
>CYANO309_C637875609 YP_477445 CYB_1207 transcription-repair coupling factor [Synechococcus sp. JA-2-3Ba(2-13)]
GAGRIPKGLIASALAQSLLVVTATLEEAGRWTAQLEGMG-WESVQLYPTSEASPYEPFDLEPELVWGQFQVLADC-AIVATERALQPHLPPPEVLRAFCLQLEPGLEMFPQQLGQQLTRLGYQRVSLVESEGQWSQRGDILDVFPVACEWPVRLEWFGNELERLREFDPVSQRSQDGIPHVWLTPTGYGPILWPPPEGLRRFLGLLYNLLSYLDPEALKTLREYRKQQLQVWILSAQPSR---TVALLQEKYSGAELEGVLLPTWVVLTDREFFGQASSRQVDPNLLKPGDFVVHKAHGIGQFLRLETLTIGGETREYLVIQYS-DGLLRVAADQVNSLSRYRASGDGPPALHKMSGSTWEKTKQKVKKSLRKVAFDLLQLYAKRAEQEGYAFPPDSPWQQELEDSFPYPLTPDQLRAVQEIKRDMESPRPMDRLLCGDVGFGKTEVAIRAIFKAVTAGKQVALLAPTTILTQQHYHTLKERFAPYPIQVGLLNRFRTSEEKKEILSRLKSGELDVVVGTHQLLGKDVQFRDLGLLVIDEEQRFGVNQKEKIKLLKTQVDVLTLTATPIPRTLYMALSGLREMSLIQTPPPSRRPIKTYLSPYNPEVIRTAIRQELDRGGQVFYVVNRIEGIEEASAKLREWVPGARIAIAHGQMPEGELEATMLAFNNGEIDILVCTTIIESGLDIPRVNTILIENAQEFGLAQLYQLRGRVGRAGIQAHAWLFYREDGILTEEARKRLQAIQEFTQLGSGYQLAMRDMEIRGIGNLLGTEQSGQVNAVGFDLYLEMLQEAIREIR-GEDTQIDLNVTAMIPQSYIPDEDQKMQAYRHLAAAGSRVELLQIAQEWQDRFGPLPKPTQELLRVMELKILARTLGFSRIKPAKEHVLLETPE
>CYANO309_C637873307 YP_475180 CYA_1763 transcription-repair coupling factor [Synechococcus sp. JA-3-3Ab]
GAGRIPKGLIASALAQSLLVVTATLEEAGRWTAQLEGMG-WESVQLYPTSEASPYEPFDLEPELVWGQFQVLADG-AIVATERALQPHLPPPEVFRAFCLKLEPGLEMSPQQLGQQLARLGYRRVSLVESEGEWSQRGDILDVFPVACEWPVRLEWFGNELERLREFDPVSQRSQDGIPYVWLTPTGYGPILWPPPEGLRRFLGLLYNLLSYLDPTTLKTLREYRKQQLQVWILSAQPSR---TVALLQEKYSSADLEGFLLPTWVVLTDREFFGQASSRQVDPNLLKPGDFVVHKAHGIGQFLRLESLTIGGETREYLVIQYS-DGLLRVAADQVNSLSRYRASSDGPPALHKMSGSTWEKTKQKVKKSLKKVAFDLLQLYAKRAEQEGYAFPPDSPWQQEFEESFPYPLTPDQIRAVQEIKRDMESPRPMDRLLCGDVGFGKTEVAIRAIFKAVTAGKQVALLAPTTILTQQHYHTLKERFAPYPIQVGLLNRFRTPEEKKEILARLKSGELDVIVGTHQLLGKDVQFRDLGLLVIDEEQRFGVNQKEKIKLLKTQVDVLTLTATPIPRTLYMALSGLREMSLIQTPPPSRRPIKTHLSPYNPEVIRTAIRQELDRGGQVFYVVNRIEGIEETSAKLREWVPGARIAIAHGQMPEGELEATMLAFNNGEIDILVCTTIIESGLDIPRVNTILIENAQEFGLAQLYQLRGRVGRAGIQAHAWLFYREDGILTEEARKRLQAIQEFTQLGSGYQLALRDMEIRGIGNLLGTQQSGQLNAVGFDLYLEMLQEAIREIR--EDTQIDLNITAMIPQSYIPDEDQKMQAYRQLAAAGSRVELLQIAQEWQDRFGPLPKPTQELLRVMELKILARTLGFSRIRPAKEHVLLETPM
>CYANO309_C638106806 YP_721415 Tery_1671 transcription-repair coupling factor [Trichodesmium erythraeum IMS101]
GASRLPKGLLTSTLAQNLLIVTATLEEAGRWAVQLEAIG-WPKVHFYPTSEAFPYEPSN-SEEMIWGQMQVLADLSAVVATERSLQPHLPTVKKFQPYCLTLKISNTLERPSLEEKLVQMGYELVPLVETEGQWSRRGDIIDVFPVASELPVRLEWFGDELRQIREFDPSTQRSLDKIAQIVLTPRDFSQW---ALGNLESITDSTFSLLDYLPEN--ENLRQQRERKHSVFLISAQPSRSVSL---LQETYSGAELEGFILPTLSVITDREFYGQATSKQVNPNKLQPGDHVVHRQHGIGKFVKLESLTLNT--RDYLTIQYA-DGLLRVAADQLSSLSRLRSTDHKKPQLNKLTGKTWESTKNKVRKSIKKLAVDLLKLYAQRAQQTGYSFPPDTPWQEEMEDSFPYQPTPDQLKATQDVKRDMESERAMDRLVCGDVGFGKTEVAIRAIFKAVIAEKQVAFLAPTTVLTQQHYHTLKERFAPYPIEIGLLNRFRTPNEKKEIQHRLATGELDIIVGTHSILSKTIQFRELGLLVVDEEQRFGVNQKEKIKALKAEVDVLTLTATPIPRTLYMALSGIREMSVITTPPPLRRPIKTHLAPYDLETARTAIRQELNRGGQVFYVVPRIEGIEELAGKLREMIPGARINIGHGKMDAAELESIMLTFSAGEADILVCTTIIESGLDIPRVNTILIEDAQKFGLSQLYQLRGRVGRAGVQAHAWLFYPTTSALTDDAQKRLRAIQEFTQLGSGYHLAIRDLEIRGAGDILGAEQSGQVNAIGFDLYTEMLEEAIREIKG-DDTKIDLSLTAFIPADYILDLDQKISAYRSVAAANTREELSQIEVDWSDRYGAIPKAGLQLLRMMELKQVAKKIGFSRIKEGKQHVILETPM
>CYANO309_C637615870 YP_170937 syc0227_c transcription-repair coupling factor [Synechococcus elongatus PCC 6301]
GAGRLAQGLVTSALVQSLLVICATLEEAGRWAAQLEGMG-WPTLHFYPTSESSPYEAFDPESELVWGQLQVLADL-AIVATERSLQPHLPPVEALRPFCQTLQRGQEVNLGELADRFAQFGYERVDTVETEGQWSRRGDIIDLFPVSAELPVRLELFGDELERLREFDPATQRSLDEIEVLRLTPTSYASV---PPEGMRRFLGVAFSLLDYLPAG--GKLADFIRDRHSIWLVSAQPSRMVAL---LQELHSGAELEGFSLPTLTLITDRECFGQAASKQVDRDRLKPGDYVVHRSHGIGRFVKLESLSLSGEMREYLVLQYA-DGLLRVAADQMGSLSRYRGMGGERPELSSMTSKAWEKTKAKARKAVRKVAVDLLKLYAQRSQQEGHAYPPDQPWQQELEESFPYQPTADQLKAVEAVKRDMESPQPMDRLVCGDVGFGKTEVAVRAIFKAVTAGKQVALLAPTTILTQQHYHTLKERFAPYPIQIGLLNRFRTASERQNIQQRLATGELDVVVGTQQLLSKGTQFRDLGLLVVDEEQRFGVNQKEKIKALKTQVDVLTLSATPIPRTLYMALSGVREMSLITTPPPSRRPIKTHLMPYDLEAVRTAISQEIDRGGQVFYVVPRVEGIEAIATRLQEMLPSLRIAVAHGQMPEGELEATMLAFNNNEADVMICTTIIESGLDIPRVNTILIEDAQRFGLSQLYQLRGRVGRAGIQAHAWLFYPGETVLSDQARQRLRAIQEFTQLGSGYQLAMRDLEIRGVGNLLGVEQSGQMEAIGFDLYMEMLQESLQEIR-GDDTQIDLSLTAFIPADYIPDIDAKMSAYRAVASAQTPADLLQIAADWSDRYGSLPASAQQLLRVMELKQVAKSLGFARTRTESKQHVILETP
>CYANO309_C637799757 YP_400343 Synpcc7942_1326 transcription-repair coupling factor [Synechococcus elongatus PCC 7942]
GAGRLAQGLVTSALVQSLLVICATLEEAGRWAAQLEGMG-WPTLHFYPTSESSPYEAFDPESELVWGQLQVLADL-AIVATERSLQPHLPPVEALRPFCQTLQRGQEVNLGELADRFAQFGYERVDTVETEGQWSRRGDIIDLFPVSAELPVRLELFGDELERLREFDPATQRSLDEIEVLRLTPTSYASV---PPEGMRRFLGVAFSLLDYLPAG--GKLADFIRDRHSIWLVSAQPSRMVAL---LQELHSGAELEGFSLPTLTLITDRECFGQAASKQVDRDRLKPGDYVVHRSHGIGRFVKLESLSLSGEMREYLVLQYA-DGLLRVAADQMGSLSRYRGMGGERPELSSMTSKAWEKTKAKARKAVRKVAVDLLKLYAQRSQQEGHAYPPDQPWQQELEESFPYQPTADQLKAVEAVKRDMESPQPMDRLVCGDVGFGKTEVAVRAIFKAVTAGKQVALLAPTTILTQQHYHTLKERFAPYPIQIGLLNRFRTASERQNIQQRLATGELDVVVGTHQLLSKGTQFRDLGLLVVDEEQRFGVNQKEKIKALKTQVDVLTLSATPIPRTLYMALSGVREMSLITTPPPSRRPIKTHLMPYDLEAVRTAISQEIDRGGQVFYVVPRVEGIEAIATRLQEMLPSLRIAVAHGQMPEGELEATMLAFNNNEADVMICTTIIESGLDIPRVNTILIEDAQRFGLSQLYQLRGRVGRAGIQAHAWLFYPGETVLSDQARQRLRAIQEFTQLGSGYQLAMRDLEIRGVGNLLGVEQSGQMEAIGFDLYMEMLQESLQEIR-GDDTQIDLSLTAFIPADYIPDIDAKMSAYRAVASAQTPADLLQIAADWSDRYGSLPASAQQLLRVMELKQVAKSLGFARIRTESKQHVILETP
>CYANO309_C637313569 NP_681742 tll0952 transcription-repair coupling factor [Thermosynechococcus elongatus BP-1]
GMPRLVKGLVATTLAQSLCVITSTLEEGGRWAAQLELMG-WDAVFFYPTSEASPYDLFDLEGEMVWGQLQVLVE-NAIVTTERALQPHLPPPEQFRAACLTLQVGQAYSLGEVATTLAALGYERVSLVETEGQWSRRGDIVDIFPVSAELPVRLQWFGDEIESIREFDPASQRSLDVLEQVTLTPISFTPL---DQEGLRRYLGLAFSLLDYLPAQTLATLREERDKGYTVWLVSAQPSRSVAL---LQEIASGAEISGFILPTTVLVSDREFFGQAAAKQVDLNKLQPGDYVVHRQHGIGQFLRLETLTINT--REYLVLQYA-DGILRVAADQLNSLSRYRTQEDRAPQLNKLTGNTWERTKARVRKAIKKVAVDLLQLYAQRAQQRGFAFPPDTPWQREMEDSFPYQPTPDQLKAIQEVKADMESDRPMDRLVCGDVGFGKTEVAIRAIFKAVMAGKQVAVLAPTTILTQQHYHTLKERFAPYPIQVGLLNRFRSERERQDLLQKLKIGEIDVVVGTHQLLSNSVKFRDLGLLVVDEEQRFGVNQKEKIKALKTQVDVLTLSATPIPRTLYMALSGVREMSLITTPPPSRRPIQTHLAPYDPETVRSAIRQELDRGGQVFYVVPRVEGIEAVAAKLQGMVVGARILIAHGQMAEGELESTMLGFSNGEADILVCTTIIESGLDIPRVNTILVEDAQRFGLAQLYQLRGRVGRAGIQAHAWLFYPRQEVLTDAARQRLRAIQEFTQLGSGYQLAIRDMEIRGVGNLLGAQQHGQLDSVGFDLYVELLEEAIAEIR-GDDTQIDLNVTAFIPADYMPDLAQKMAAYRAVSAATTKEDLMQLAAEWSDRYGALPKSVQQLLRVVELKQLARQCGISRIREGKQHVIL----
>CYANO309_C642604416 YP_001868743 Npun_R5494 transcription-repair coupling factor [Nostoc punctiforme PCC 73102]
GISRLPKGLVASALAQDLFVVCATLEEAGRVYAQLEAMG-WQTVHFYPTSEASPYEPFDPETEMSWGQMQVLADLKAIVATQGALQPHLPPPEAFGQFCLTLKRGMELDLNAFSEKITILGYERVPLVETEGQWSRRGDIVDVFPVSSEFPVRLEWFGDEIEQMREFDPATQRSLDKVDQLILTPTSFAPI---LLEGSRRFLGLAFSLLNYLSKNTLETIRQERDRNFSIWLLSAQPSRSVSL---LQEIYSGAELEGFILPTIVIVTDREFFGQATSKQVDPNKLRPGDYVVHRNHGVGKFVKLESLTIDT--RDYLVVQYA-DGLLRVAADQVGALSRFRAGGDKAPELNRMTGKAWENTKNKVRKAIKKLAVDLLKLYAARSQQQGFSFPSDMPWQEELEDSFPYQPTTDQLKAVQDVKRDMESDRPMDRLVCGDVGFGKTEVAIRAVFKAVTAGKQVALLAPTTILTQQHYHTLKERFAPYPVNVGLLNRFRSAEERRDIQKRLATGELDVVVGTQQLLGKGVMFRDLGLLVVDEEQRFGVNQKEKIKSLKTQVDVLTLSATPIPRTLYMSLSGIREMSLITTPPPTRRAIKTHLSPINSESIRSAIRQELDRGGQVFYVVPRVDGIEETTANLREVIPGARFAIAHGQMDESELESTMLTFSNGDADILVCTTIIESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRAGIQAHAWLFYPKQRQLSDAARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMDAIGFDLYMEMLEEAIREIR-GEDTQIDLNLTAFIPADYITDLDQKMSAYRAVATAKSKSELNQIAAEWSDRYGTLPVSANQLLRVMELKQLAKKLGFSRIKPEQKQHVVLETP
>CYANO309_C637718113 YP_323275 Ava_2767 Transcription-repair coupling factor [Anabaena variabilis ATCC 29413]
GIPRLPKGLVASALAQNLFVVCATLEEAGRAYAQLEAMG-WQTVHFYPTSEASPYEPFDPETEMTWGQMQVLADLKAVVATVGALQPHLPPPDAFIPFCLTLKRGLEFDLETFSEKITILGYERVPLVETEGQWSRRGDIVDVFPVSSELPVRLEWFGDEIEQIREFDPNTQRSLDKITEIVLTPTSFTPI---LIEGSRRFLGLAFSVLDYLPENTLDTLRQERDRNFSIWLISAQPSRSVSL---LQEVYSGAELEGFILPTLAVITDREFYGQAASKQVDPNKLRPGDYVVHRSHGIGKFVKLESLTIDT--RDYIVVQYA-DGLLRVAADQVGALSRFRATGDKPPELHKMTGKAWDNTKNRVRKAIKKLAVDLLKLYAARSQQQGFAYPQDMPWQEEMEDSFPYQATTDQLKAVQDVKRDMESDRPMDRLVCGDVGFGKTEVAIRAIFKAVTSGKQVALLAPTTILTQQHYHTIKERFAPYPVNVGLLNRFRTAEERRNIQKRLATGELDIVVGTHQLLGKSVNFKDLGLLVIDEEQRFGVNQKEKIKSLKTQVDVLTLSATPIPRTLYMSLSGIREMSLITTPPPTRRPIKTHLSPRNPESVRSAIRQELDRGGQVFYVVPRVDGIEEITANLREMVPGARFAIAHGQMDESELESTMLTFSNGDADILVCTTIIESGLDIPRVNTILIEDAHRFGLSQLYQLRGRVGRAGIQAHAWLFYPKQRELSDAARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMEAIGFDLYMEMLEESIREIR-GDDTQIDLNLTAFIPADYITDIDQKMSAYRAVAAAKSKDELTQIAAEWSDRYGTLPVSANQLLRVMELKQLAKKLGFSRIKPESKQHVVLETP
>CYANO309_C637235624 NP_489255 all5215 transcriptional-repair coupling factor [Nostoc sp. PCC 7120]
GISRLPKGLVTSALAQNLFVVCATLEEAGRAYAQLEAMG-WQTVHFYPTSEASPYEPFDPETEMTWGQMQVLADLKAVVATVGALQPHLPPPDAFIPFSLTLTRGLEFDLDTFSEKITILGYERVPLVETEGQWSRRGDIVDVFPVSSELPVRLEWFGDEIEQIREFDPNTQRSLDKITQIVLTPTSFAPI---LTEGSRRFLGLAFSVLDYLSENTLDTLRQERDRNFSIWLISAQPSRSVSL---LQEVYSGAELEGFILPTLVVITDREFYGQAASKQVDPNKLRQGDYVVHRSHGIGKFVKLESLTIDT--RDYIVVQYA-DGLLRVAADQVGSLSRFRTTGDKAPELHKMTGKAWDNTKNRVRKAIKKLAVDLLKLYAARSQQQGFAYPQDMPWQEEMEDSFPYQATTDQLKAVQDVKRDMESDRPMDRLVCGDVGFGKTEVAIRAIFKAVTSGKQVALLAPTTILTQQHYHTLKERFSPYPVNVGLLNRFRTAEERRNIQKRLATGELDIVVGTHQLLGKSVSFKDLGLLVIDEEQRFGVNQKEKIKSLKTQVDVLTLSATPIPRTLYMSLSGIREMSLITTPPPTRRPIKTHLSPRNPESVRSAIRQELDRGGQVFYVVPRVDGIEEITANLREMVPGARFAIAHGQMDESELESTMLTFSNGDADILVCTTIIESGLDIPRVNTILIEDAHRFGLSQLYQLRGRVGRAGIQAHAWLFYPKQRELSDAARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMEAIGFDLYMEMLEESIREIR-GDDTQIDLNLTAFIPADYITDIDQKMSAYRAVAAAKSKDELTQIAAEWSDRYGTLPVSANQLLRVMELKQLAKKLGFSRIKPESKQHVVLETP
>CYANO309_C641253229 YP_001518445 AM1_4147 transcription-repair coupling factor [Acaryochloris marina MBIC11017]
GVPRLPKGLVASALAQHLFVVTATLEEAGRWATQLEAMG-WQTVYFYPTSEASPYESLDRESEMIWGQLQVLAETPAIVTTERALQPHLPPVQIFEPYCLSLEAGIELDLKTLSDKLARLGYERVSLVETEGQWSRRGDIVDIFPVASELPIRLEWFGDELDKMREFDPTSQRSLDSSEKLTLTPTSFAPI---TLEGSQRFLGMAFSLLDYLPENTLETIREERDRKFSIWLISAQPSRSVAL---LQEVYSGAELEGFVLPTTVVITDREFFGQATSKKVDPNKLQPGDFVVHRNHGIGKFLKLESLTLHT--REYLVLQYA-DGTLRVAADQLGSLSRFRNTGEGRPQLNKMSGKAWEKTKNKVRKSIKKLAVDLLKLYAQRAQQEGFTFPLDQPWQEEMEDSFPYQPTADQLKAAQDVKRDMENPRPMDRLVCGDVGFGKTEVATRAVFKAVTAGKQVAFLAPTTILTQQHYHTLKERFAPYPIQIGLLNRFRSAEERKDIQNRLKTGELDIVVGTHQLLGKSVNFRDLGLLVIDEEQRFGVNQKEKIKTLKTQVDVLTLSATPIPRTLYMALSGVREMSLITTPPPSRRPIKTHLSPYDPESIRSAVRQELDRGGQIFYVVPRVEGIEEVAGKLREMVPSARIAIAHGQMVEGELEATMLTFSNGDAEILVCTTIIESGLDIPRVNTILIEDAQKFGLSQLYQLRGRVGRAGIQAHAWLFYPNQSSLTEKARKRLRALQEFSQLGSGYQLAVRDMEIRGVGNLLGAEQSGQMEAIGFDLYMEMLDESINEIRG-DEAQVDLNLTAFIPADYITDLDQKMSAYRAVASAETKADLTQTAVDWNDRYGPIPDSAQQLLRIMELKQLAKSLGFSRIKEDKQHVMLETPM
>CYANO309_C643584825 YP_002482555 Cyan7425_1827 transcription-repair coupling factor [Cyanothece sp. PCC 7425]
GAARLPKGLVASALAQNLLVITPTLEEAGRWAAQMEALG-WSTVHFYPTSEASPYEPFDLEAEMTWGQLQVLADLGAIVATERALQPHLPPVAAFQPDCLTLTQGMEMELKPLSDRLAQLGYERVALVETEGQWSRRGDIIDVFPVACELPVRLEWFGDELDKIREFDPATQRSLDSIDQLILTPTSFSPI---TPEGMRRFLGLAFSLLDYLPDNTLETLRTERERNFAIWLVSAQPSRSVAL---LQEIYSGAELEGFILPTLVVVTDREFFGQAASKQVDPNKLQPGDYVVHRQHGIGKFLKLESLTIRT--REYLVLQYA-DGLLRVAVDQLGSLSRFRATAEQAPELNKMTGKAWERTKSKVRKAIRKIAVDLLQLYAQRSQQQGFAFPLDQPWQEELEESFPYQPTPDQVKAIQDVKRDMESDRPMDRLVCGDVGFGKTEVAVRAIFKAITAGKQVAFLAPTTILTQQHYHTLKERFAPYPIQIGLLNRFRSADERKNILQRLKTGELDVVVGTHQLLGKGVVFRDLGLLVIDEEQRFGVNQKEKIKTLKTQVDVLTLSATPIPRTLYMALSGVREMSLITTPPPSRRPIKTHLAPYDPETIRSALRQELDRGGQVFYVVPRVEGIEEVAAKLREMVPSARIAIAHGQMEEGELEATMLTFNNGEAEILVCTTIIESGLDIPRVNTILIEDAQKFGLSQLYQLRGRVGRAGIQAHAWLFYPKLNMLTEAARQRLRALQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQHGQMDTVGFDLYMEMLDEAIAEIRG-DDTQIDLNLTAFIPADYIPDLDQKMSAYRAVASADSTVELAQIKTDWNDRYGPIPSAALQLIRVVELKQIAKKLGFSRIKEGTQHIILETPM
>CYANO309_C641611297 YP_001734540 SYNPCC7002_A1287 Transcription-repair coupling factor (TRCF) [Synechococcus sp. PCC 7002]
GLPRLPKGLLASSLAQNLLVVCATLEEAGRWAAQLEAMG-WGQVLFYPTSEASPYEAFDPESEMIWGQMQTLGAI-VVVTTERALQPHLPPQTVFQDYCLTLTPGEELDAGAIATQLTRLGYERVNIVETEGQWTRRGDIVDIFPVSGELPIRLDFFGDQLESIREFDPNSQRSLDKVDQLVLTPTAWAPLIGQYPEGMQRFLGIAFSILEYLPENTLEILRGKREDKYNAWLVSAQPSR---SVSLLQEKYKGAELEGFILPTIAVVTDREFYGQAASKTVDVNKLNPGDYIVHKSHGIGRFIKIETL----QSREYLVLKYA-DGILRIPADSLDTLSRYRHTAKGRPELHRMGGKTWEKTKAKVRKSVKKLAVDLLKIYAQRAEMKGITYPSDAPWQQEMEDSFPYQATPDQLKAVQDIKRDLESDRPMDRLVCGDVGFGKTEVAIRAIFKVVTGGKQVALLAPTTILTQQHYHTLKERFSPYPINIGLLNRFRTASERKDILERLHKGELDIVVGTQQLLGKDVQFKDLGLLVVDEEQRFGVNQKEKIKALKTKVDVLTLSATPIPRTLYMSLSGIREMSLITTPPPSRRPIQTHVSRHNPEIIRTAIRNELDRGGQIFYVVPRVEGIETIATQLQEMIPSARVAIAHGQMNEADLETTMLTFNNGEADILLCTTIVESGLDIPRVNTIIVEDAQKFGLSQLYQLRGRVGRSGIQAHAWLLYPSKGELTEKARKRLRALQEFSQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMEAIGFDLYMEMLQDCISEIRG-DDCQVDLRLTAFIPSNYITDGDQKLDAYRLITQANSKLELMQIAADWGDRYGKLPPSVEQLLQVIELKMIAKSLGFARIKEGKQNIVLETPM
>CYANO309_C641536065 YP_001657094 MAE_20800 transcription-repair coupling factor [Microcystis aeruginosa NIES-843]
GLARLPKGLIGTAFARNLLIICANLEEAARWAAQLEAMT-WKGVFFYPTSEACPYERFNRESEMIWGQMQVLSAI-AIVTTEKALQPHLPPREVFEQYSDNFAVGRVIEAKNLDLTLARLGYERVSLVETEGQWSRRGDIVDIFPVSAELPVRLEFFGDELEKLREFDPATQRSLDSIPNLLLTPTSFAAMIAPYPEGIERFLGLSFSLLDYLPENTLEILRGKRENKYATWLISAQPSR---TVSLLQEKYSGAELEGFILPTIVVVSDREFFGQAASVQVDVNKLRPLDFVVHKHHGIGQFIKLEVV----QGRDYLVIKYA-DGLLRVPADSVDNLSRYRHTGNQEPELHKISGKAWEATKARVRKSVKKLAVDLINIYAQRAQKSGFAYPMDNPWQRELEDSFPYQPTADQLKAIQDVKRDLESDRPMDRLVCGDVGFGKTEVAIRAIFKAVTTGKQVALLAPTTILTQQHYHTLKERFAPYPINVGLLNRFRTNSEKKDIVQRLKTGELDIVVGTQLLLSKAVEFKDLGLLVIDEEQRFGVNQKEKIKAFKSNIDVLTLTATPIPRTLYMSLSGVREMSLITTPPPSRRPIQTHLSSYNSDVIRTAIRNELDRGGQIFYVVPRIEGIEEKAAAIQGMIPGARIAIGHGRMDEAELETTMLAFNNGEADILVCTTIVESGLDIPRVNTIIIEDAQKFGLAQLYQLRGRVGRSGVQAHAWLLYPAKAELTETARERLKAIQEFTQLGSGYQLATRDLEIRGAGNLLGAEQSGQMEAIGFDLYMEMLQEALREI-QGEDTQIDLKLTAFIPNDYISDPEQKMDVYRAIATANSQKNLGQIAADLVDRYGAIPSPVAQLFKVIELKHLAKSLGFSRIKPDGKQHIILETP
>CYANO309_C637011896 NP_442325 sll0377 transcription-repair coupling factor [Synechocystis sp. PCC 6803]
GLPRLPKGLIVSSLAQNLLVITATLEEAGRWTAQLELMG-WQTVNFYPTSEASPYDPGRLESEMVWGQMQVLAEL-AIVATEKALQPHLPPVATLREYCLALRRGQEMDSKSLELTLARLGYERGSTVETEGQWSRRGDIVDIFPVSAELPVRLEWFGDELEKIREFDPASQRSLDDLTGLVLTPTSFDQVIEP--EGLQRFLGLAFCLLDYLPTETVEILRGKREGQYSTWLISAQPSR---TVSLLQEKYSGAELEGFILPTLVLVTDRELFGQATSKQVDINKLSPGDYVVHKSHGIGKFLKLDAL----ANREYLMIQYA-DGILRVPADSLDSLSRFRHTGTRPPELHKMGGKVWEATKNKVRKAVKKLAVDLLNLYAKRAKQVGYAYPPDSPWQQELEDSFPYQPTPDQLKAVQDVKRDLEGDRPMDRLVCGDVGFGKTEVAVRAIFKAVTSGKQVALLAPTTVLTQQHYHTLKERFAPYPITIGLLNRFRTASEKKEILAKLKSGELDIVVGTQQVLGTSVKFKDLGLLVIDEEQRFGVNQKEKIKTLKTEVDVLTLTATPIPRTLYMSLSGIREMSLITTPPPSRRPIKTHLSPYNPEVIRTAIRNELDRGGQVFYVVPRIEGIEELGGQLRQMVPSARIAIGHGQMEESELESTMLAFNDGEADILVCTTIIEAGLDIPRVNTIIVEDAQKFGLAQLYQLRGRVGRSGIQAHAWLLYPNQKQLTEKARLRLRALQEFSQLGSGYQLATRDMEIRGVGNLLGAEQSGQMEAIGYEFYMEMLQDAIKEIQG-EDTQIDLPLTAFIPSDYIPDLEEKMAAYRRITSIESTDELPKIALDWGDRYGMLPSPVEELFKVVKLKHLAKSLGFSRIKEGKQNLVLETPM
>CYANO309_C643481968 YP_002378987 PCC7424_3738 transcription-repair coupling factor [Cyanothece sp. PCC 7424]
GIPRLPKGLIASSLAQNLLIICPTLEEAGRWATQLEAMG-WKTVHFYPTSEGSPYDTLNPESEMIWGQLQVLSGI-AIVTTEKALQPHLPPPNKLYSYCLNFQQGMTLEAKTLDQNLTQLGYERVNLVETEGQWSRRGDIVDIFPVSAELPVRLEWFGDELEQLREFDPSTQRSLDHITQLTLTPISFFPIITDFPEGMQRFLGLAFSLLNYLPSNTLEILRGKRENKYAIWLVSAQPSR---TVSLLEEKYSGAELEGFILPTIVVVTDKEFFGQAASKQVNLDKLRPGDYVVHRNHGIGKFIKLEIL----ESREYILIQYA-DGTLRIPSDSLDSLSRYRHTSNTPPQLDKMTGKTWEQTKQKVRKTVKKLAVDLINLYAKRAQQEGFAYPDDSPWQQELEDSFPYQPTPDQIKAIQEVKRDMMNERPMDRLVCGDVGFGKTEVAVRAIFKAVTSGKQVAFLAPTTILTQQHYHTLKERFAPYPINIGLLNRFRTPSENRDILQRLATGELDIVVGTHQLLSNKVKFKDLGLLVIDEEQRFGVNQKEKIKTLKTQVDVLTLTATPIPRTLYMSLSGVREMSLITTPPPSRRPIKTHLTPYNPDALRTAIRNELDRGGQIFYVVPRVEGIEEVAAEIRDMIPTARIAIAHGQMSVSELEPTMLAFNNGEADILVCTTIIESGLDIPRVNTIIVEDAQKFGLSQLYQLRGRVGRSGIQAHAWLVYPHKAALTETARQRLRALQEFTQLGSGYQLATRDMEIRGVGNLLGAEQSGQMEAIGFDLYMEMLQEAIREIQG-EDTQIDLKLTAFIPTDYITDANQKMDAYRTIATANSPAELKQIATDLCDRYGALPSPVEQLLQVIELKQLAKSLGFSRIKDGKQHVILETPM
>CYANO309_C641678207 YP_001805124 cce_3710 transcription-repair coupling factor [Cyanothece sp. ATCC 51142]
GINRLPKGLISSALAQNLLVICATLEEAGRWTAQLEIMG-WKTVNFYPTTEASPYEPFNPESEMIWGQMQVLSNL-AIVTTEKALQPHLPPPDIFHTHCLKLQAGMTEKSKKFDEGLVKLGYERVNLVEVEGQWSRRGDIVDIFPVSSEVPIRLEWFGDELEKIREFDPATQRSLDSIENILLTPISFNTIIANYPPGMQRFLGLAFCILDYLSPNTLEILRGKREDKYATWLISAQPSR---TVSLLQEKYSGAELEGFILPTIVVVTDKEFFGQATSKKVDLQQLHPGDYVVHKSHGIGKFLKLESL----ATREYLVVQYA-DGILRIPADSFDSLSRYRHTGSTPPQLHKMTGKTWQKSKQKVRKNIKKLAVDLINLYAKRAKNTGFTYPLDTPWQQELEDSFPYQPTPDQLKAIQDVKIDLESDRPMDRLVCGDVGFGKTEVAVRAIFKAVTSGKQVAFLAPTTILTQQHYHTLKERFAPYPINIGLLNRFRTTSEKKEIIQRLATGELDIVVGTQQLLGKSVKFKDLGLLVVDEEQRFGVNQKEKIKEIKSHVDVLTLTATPIPRTLYMSLSGIREMSLITTPPPSRRPIKTHLSRYNPDVVRTAIRNELDRGGQVFYVVPRVEGIEEVAAQIKTMVPSARMAIAHGQMDVNELEITMLSFNNGDADILVCTTIVESGLDIPRVNTIIVEDAQKFGLAQLYQLRGRVGRSGIQAHAWLLYPSKAQLTETARQRLRALQEFSQLGSGYQLATRDMEIRGVGNLLGAEQSGQMESIGFELYMEMLQEAIREIQ-GEDTQIDLQLTAFIPTEYIPDMEQKMSAYRGIAVANSKKELAQIAAEWNDRYGNLPVPVEQLLQVMELKQLAKSLGFSRIKEGKQHIVLETPM
>CYANO309_C643477291 YP_002374390 PCC8801_4312 transcription-repair coupling factor [Cyanothece sp. PCC 8801]
GVPRLPKGLVSSALAQNLLVICATLEEAGRWAAQLEMMG-WKSVNFYPTSEASPYEAFNPESEMIWGQMQVLSIL-AIVTTEKALQPHLPPSTVFETYCFNLQIGITKTSQEIDETLVRLGYERVALVETEGQWSRRGDIVDIFPVSSELPIRLEWFGDALEKIRELDPATQRSLDKLEQVILTPTSFNPIIANFPEGMARLLGIAFSLLDYLRENTLEILRGKRENKYSTWLISAQPTR---TVSLLEEKYSGAELEGFILPTIVVITDREFFGQAASKQVDLNQLNPGDYVIHKNHGLGKFLKLESL----ATREYLVIQYE-DGLLRVPADSFDSLSRYRHTGSHPPELHKMTGKIWEKTKQRVRKSIKKLAVDLLNLYAKRAKKEGFIYPPDTPWQEELEDSFPYQPTPDQLKAVQDVKMDLESDRPMDRLVCGDVGFGKTEVAVRAIFKAVTSGKQVALLAPTTILTQQHYHTLKERFAPYPINIGLLNRFRTTSEKKDIVQRLATGELDIVVGTHQLLGQSVKFKNLGLLVIDEEQRFGVNQKEKIKVLKTEVDVLTLTATPIPRTLYMSLSGIREISLITTPPPSRRPIKTHLSSYNPDVVRTAIRNELDRGGQIFYVVPRVEGIEEVAGQIQQMVPSARIVIAHGQMDVNDLEMTMLGFNNGEADILVCTTIIESGLDIPRVNTIIVEDAQKFGLSQLYQLRGRVGRSGIQAHAWLLYPNKGQLSETARQRLRALQEFSQLGSGYQLATRDMEIRGVGNLLGAEQSGQMMAIGFELYMEMLQEAIKEIQ-GDETQIDLQLTAFIPSDYIPDLQQKMDAYRRIAMANSKEQLEEIVKDWTDRYGTIPSPVRQLLQVIELKQIGKSLGFSRIKVEGKQNVVLETP
>SPIRO157_P637021293 NP_218784 TP0344 transcription-repair coupling factor (trcF) [Treponema pallidum pallidum Nichols]
GCTGGLRSYFFGEYVRHIVLVVPTEQDVAAVCTDLAHA--AVPTRVLPWWGSLPYRPVSPNAHVFSHRVEALCALCAFVFTQRALLTPVPPLDYVRTLKRSFRVGEHIEIHTLAAQLMQWGYARVDHVSACAEFSLRGEILDIAAAAADNTYRIVCDFNTIERIHILAVSTCAVLQEVSACTLYAAKEILWSEETYEGEEMFYPLCFCVLEYFPSPSVEELLRLSKDGWHVFVFAESEQQALRIRALVKGVLPCALSAGFSIPAILIVQEGEIFGRRSTPIDTFVELNPGDYVVHAQYGIGLFKGIERIKTQ-SERDYVNLLYAQEETILIPIEQAHLVQRYIGNEGNKPHLDSLGSKSWETRKARVKKSVENIAQKLVELYSLRKTTRGHAFPKDDEWQYAFEAAFPYEETDDQRICIEEVKQDMQEAVPMDRLVCGDVGYGKTEIAMRAAFKAVMGGKQVVFLTPTTLLVEQHFRTICNRFKHFPVRIEKLSRFVPKSEQKDILAKLAHGDIDLIVGTHRLIQKDVSFKDLGLMILDEEQRFGVQDKEKLKQMKTNVDCLSLSATPIPRTLHMGMLKIRDMSLLTTPPEGRLPIETVIQQFDPNLVATAIRKELDREGQIFYLHNRIENLESVKCMLQKLVPELSICVAHSLMGSEELEDIFERFYQKTFQLLLSTTIIENGIDVPNANTIIIDRADMYGVSQLYQLRGRVGRSDKKAYAYLLYYHDVALSDLAIKRLQVISDFTDLGAGFKVALKDMEIRGVGNLLGKEQSGDIYSVGFDLYVQLLEEAIERLQ--IETVIDLNYRGFIPHTYIAADEIKMELYKKIAAAHTHEELERIRTETITRFGPIPEEAAGLFTVAEIKVRCEKLAILSLKETHESLLIEFDK
>SPIRO157_P642659466 YP_001933349 TPASS_0344 transcription-repair coupling factor [Treponema pallidum pallidum SS14]
GCTGGLRSYFFGEYVRHIVLVVPTEQDVAAVCTDLAHA--AVPTRVLPWWGSLPYRPVSPNAHVFSHRVEALCALCAFVFTQRALLTPVPPLDYVRTLKRSFRVGEHIEIHTLAAQLMQWGYARVDHVSACAEFSLRGEILDIAAAAADNTYRIVCDFNTIERIHILAVSTCAVLQEVSACTLYAAKEILWSEETYEGEEMFYPLCFCVLEYFPSPSVEELLRLSKDGWHVFVFAESEQQALRIRALVKGVLPCALSAGFSIPAILIVQEGEIFGRRSTPIDTFVELNPGDYVVHAQYGIGLFKGIERIKTQ-SERDYVNLLYAQEETILIPIEQAHLVQRYIGNEGNKPHLDSLGSKSWETRKARVKKSVENIAQKLVELYSLRKTTRGHAFPKDDEWQYAFEAAFPYEETDDQRICIEEVKQDMQEAVPMDRLVCGDVGYGKTEIAMRAAFKAVMGGKQVVFLTPTTLLVEQHFRTICNRFKHFPVRIEKLSRFVPKSEQKDILAKLAHGDIDLIVGTHRLIQKDVSFKDLGLMILDEEQRFGVQDKEKLKQMKTNVDCLSLSATPIPRTLHMGMLKIRDMSLLTTPPEGRLPIETVIQQFDPNLVATAIRKELDREGQIFYLHNRIENLESVKCMLQKLVPELSICVAHSLMGSEELEDIFERFYQKTFQLLLSTTIIENGIDVPNANTIIIDRADMYGVSQLYQLRGRVGRSDKKAYAYLLYYHDVALSDLAIKRLQVISDFTDLGAGFKVALKDMEIRGVGNLLGKEQSGDIYSVGFDLYVQLLEEAIERL--QIETVIDLNYRGFIPHTYIAADEIKMELYKKIAAAHTHEELERIRTETITRFGPIPEEAAGLFTVAEIKVRCEKLAILSLKETHESLLIEFDK
>SPIRO157_P637160165 NP_971894 TDE1287 transcription-repair coupling factor [Treponema denticola ATCC 35405]
GISGGLFGFFLTEYLYPVLVVVPTEKEAEAVRADLDFSG-IE-NFVLPWWGSLAYRPISPTAPVFSERAEVLIRLPVFITCQRSFLTPVPPADYLKQNKVEIAAGSSLDILSLAELLSLWGYIRVPRVSVRGEFALRGEVLDILASNGSEKYRIQFDFDKVEKIKSFDIASQGSLEEYKKINFYPVKEVIWNDETFEGEEIFYPLAFSVLEYADIP-VEELNNLLNDDWSIFVFAESDNQALRIEEILHEILPYNLSGGFGIPDILVIHENEIFGRKSSVIDTFIELNPGDYVVHVNYGIGKFRGIERVKID-TERDYINLLYANDETVFIPIEQADLVQRYIGNEGEAPHLDILGSKSWENRKNKVKKSVEDIAAKLIDLYSKRKASTGFAFQKDDEWQTAFEAAFPYEETDDQLTCIAEVKEDMEKPVPMDRLICGDVGYGKTEVAMRAAFKAVMSGKQVAFLSPTTILTEQHFETLDKRFKNFPVKLARLSRFVPKGEQKKVLEKLKKGEVDILIGTHRIIQKDVVFKDLGLMIVDEEQRFGVKDKERLKQMKHNVDCLSLSATPIPRTLHMSLLKIRDMSVIATPPQNRKPVETVIAEFNAEKVAEVIRRESERGGQVFYLHNRVESLDETLFMLQSLLPEIMIETAHGQMSPNQLEEIFERFSLGGFQVLIATTIIENGIDIPNANTIIIDRADMYGVSQLYQLRGRVGRSDKKAYAYLLYPDDKALSEIAMKRLQVISDFTELGSGFKIAMKDMEIRGAGNLLGREQSGDIYSVGFDLYLRLLDEAVQKLK--QESVIELEYSGFIPDSYISSPETKMEVYKKIAAVKVQGDLDRVYSEILDRFGPAPSEVESLLALSEIKIICNHLSIASLKERKAAVRIEFAR
>THERMI154_P637499171 YP_004508 TTC0533 transcription-repair coupling factor [Thermus thermophilus HB27]
ALPQVGAALLFAQEAPPALLLVPEAR--LRRYRDLSAF--GAKVYVNPGLE--ALEEKA-----------------LFVLSYEEALSPFPEDP--EAWRLLLEVGRAYPREALLSRLLKLGYARD------EDYRVLGEVVEL----GE--VRLEFFGDELERLVVRGEERRRHV-----LLPKPGKAEGFTSK---------PVYL------PALAPKDLARWLAEGKRVHLFVGHARTLEYLKRRLQALLPGDFEGGAEWGEWVLLTEALVFATVGEGLSDPGALSPGDYLIHPEHGVGQYLGLETREVLGVKRDYLVLRYKGEGKLYLPVEQLPLLKRHPGTTDDPPELSSLGKNEWQRAKEKARKDVEELAGRLLVLQAKRKATPGRAFPPLPEWDPLVEKGFPYELTPDQKRALEEVLRDLESPHPMDRLVSGDVGFGKTEVALRAAHRVVGHGAQVAFLVPTTLLAEQHGKTFRERFQGLPVRVAVLSRFTPPKEEEAILKGLAEGTVDIVIGTHRLLQEDVRFRDLGLLIVDEEHRFGVAQKERIRELKAEVDTLYLSATPIPRTLYSALVGLKDLSSIQTPPPGRKPIKTFLAPFDPLLVREAILFELERGGKVFYVHDRVASIEARRRFLESLVPEARIGVVHGQMPESLIEETMLLFAEGAYDVLLATTIIEAGLDVPEANTILIERADRLGLATLYQLRGRVGRREEEAYAYLFHPP--RLTEAAEKRLAAIADLSDLGSGHLLAERDMEIRGVGNLLGPEQHGHIRALSLEVYTELLEEAIRKLKG-RHVTLDLALSARLPAEYVGSLEARSRYYSRFAEAKSLAELSRLVRELKERYGPLPEEAENFVALARLRLVAERKGVVSITEGLTHLEVVFPR
>THERMI154_P637595288 YP_144155 TTHA0889 transcription-repair coupling factor [Thermus thermophilus HB8]
ALPQVGAALLFAQEAPPALLLVPEAR--LRRYRDLSAF--GAKVYVNPGLE--ALEEKA-----------------LFVLSYEEALSPFPEDP--EAWRLLLEVGRAYPREALLSRLLKLGYARD------EDYRVLGEVVEL----GE--VRLEFFGDELERLVVRGEERRRHV-----LLPKPGKAEGFTSK---------PVYL------PALAPKDLARWLAEGKRVHLFVGHARTLEYLKRRLQALLPGDFEGGAEWGEWVLLTEALVFATVGEGLSDPGALSPGDYLIHPEHGVGQYLGLETREVLGVKRDYLVLRYKGEGKLYLPVEQLPLLKRHPGTTDDPPELSSLGKNEWQRAKERARKDVEELAGRLLVLQAKRKATPGRAFPPLPEWDPLVEKGFPYELTPDQKRALEEVLRDLESPHPMDRLVSGDVGFGKTEVALRAAHRVVGHGAQVAFLVPTTLLAEQHGKTFRERFQGLPVRVAVLSRFTPPKEEEAILKGLAEGTVDIVIGTHRLLQEDVRFRDLGLLIVDEEHRFGVAQKERIRELKAEVDTLYLSATPIPRTLYSALVGLKDLSSIQTPPPGRKPIKTFLAPFDPLLVREAILFELERGGKVFYVHDRVASIEARRRFLENLVPEARIGVVHGQMPESLIEETMLLFAEGAYDVLLATTIIEAGLDVPEANTILIERADRLGLATLYQLRGRVGRREEEAYAYLFHPP--RLTEAAEKRLAAIADLSDLGSGHLLAERDMEIRGVGNLLGPEQHGHIRALSLEVYTELLEEAIRKLKG-RHVTLDLALSARLPAEYVGSLEARSRYYSRFAEAKSLAELSRLVRELKERYGPLPEEAENFVALARLRLVAERKGVVSITEGLTHLEVVFPR
>THERMI154_P637035857 NP_295255 DR1532 transcription-repair coupling factor [Deinococcus radiodurans R1]
LLPQVARMALFAAFP-PAVLLTTPDRVANYATAAALGA---P-VSINPEWE-----TRA----------------EHVVLDVNTALDLFPARP--EDHALSLRVGASYPREELLARLERFGYERGRETDEPG-FDLRGDTLELLTPGAEEGLRAEFFGDELDTLRQLRPGELTG-EKIQSFTLAPTADYLTETKFLDSPEFYASALEVLIDTL-----RDVAEWRAGGYRVFILVRHDRTAAYLADKLLGFLRSGGEGGFVIPETVVITEDLIYGFAGRPVTDALGLSVGDFLIHPEHGIGQFLGLETRKVLGVTRDYLNIGYRGGSRLSVPIEQLPILRRHPGTTDDPPQLSSFDKKDWARAKEKARKNAEEVAAKLLVQYAARQVTPGNAFDPQPEWDEQVEKNFEFELTKDQVTALKETMRDLEKPTPADRLISGDVGFGKTEVALRAAHRVVGHGKQVAVLVPTTLLAEQHTATFVERFKGLPVRVEGLSRFTTDKQARNILAELKAGRVDILIGTHRLLSGDIEFKDLGLIIVDEEHRFGVGQKEKLRQLRKAVDTLALSATPIPRTLYMSMVGLRDMSSIQTPPKGRRPIQTILSPFDPLTVRDAIMTEIGRGGKVFYIHDRIASIGARSLYLRNLVPEARIGVAHGRMNEEELEEIMLGFEQGAFDVLLATTIVETGLDIPEANTILIERSDRLGLAQLYQLRGRVGRRAQTAYAYLFYPP--RMTENAQRRLWAIADLQDLGSGHLLAEKDMEIRGVGNILGEEQHGHVQAVSIDVYTELLAEAVAKLK-GPSISIDLPVNARLTPEYFPNEGERIATYGRLSDARTLQAISRVERDLRKKYGPPTPEVQNFIDLAKLRLTALAKRVLSIGETMTQLQITFAY
>THERMI154_P643796878 YP_002785304 Deide_06920 putative transcription-repair coupling factor [Deinococcus deserti VCD115]
LLPQIARAALFAAYP-PAVLLTTPDRLPSYASSGVLGA----PVSVNPDWD---------------ARHE------HVVLDVNTALDLFPSNP--EEHALTLKVGGTYPREALLSRLERLGYERG---EEPG-FELRGDTLELLEPGAEEGVRAEFFGDELDTLRTLAPGELTG-AKITSFTLEPTGEYLTDVKLPGRVFLDSPEFYSSLGVLAETLWRDVLEWRGAGYRVFILVRHDRTAAYLADKLLGFLRAAGEGGFVIPETVVITEDLIYGSTGRPVTDALGLHVGDFLIHPEHGIGRFEGLETRKVLGVTRDYLNIEYRGGARLSVPIEQLPVLRRHPGTTDDPPVLSSFDKKDWAKAKERARKNAEEVAGKLLVQYAARQVTPGNAFPPQPEWDEQIEQNFKFELTSDQKISLKETMRDLEKPNPADRLISGDVGFGKTEVALRAAHRVVGHGRQVAILVPTTLLAEQHTSTFVERFKGLPVRVEGLSRFTSPQQARSILNDLKAGKVDILIGTHRLLSGDIEFKDLGLIIVDEEHRFGVSQKEKLRALRRAVDTLALSATPIPRTLYMSMVGLRDMSSIQTPPKGRKPIQTILAPFDPVTVRDAILNEIERGGKVFYIHDRIASIGARSLYLRNLVPEARIGVAHGRMNEEELEEIMLGFEQGAFDVLLSTTIVETGLDIPEANTILIERADRLGLAQLYQLRGRVGRRAQTAYAYLFYPP--RMTENAQRRLWAIADLQDLGSGHLLAEKDMEIRGVGNILGEEQHGHVQAVSIDVYTELLSEAVAKLK-GPSVSIDLPVSARLTPEYFHDEEARIATYGRLSEARTLQAISRVERDLRKKYGPPAPEVQNFIDLAKLRLTALAKRVLSVGETMTHLQVTFAY
>THERMI154_P641229558 YP_604016 Dgeo_0545 transcription factor CarD [Deinococcus geothermalis DSM 11300]
LLPQVARAALFAAYP-PAVLLTTPERVTLYASAGALGA---P-VSVNPDWD-----SKH----------------EHVVLDVNTALDLFPTHP--EDHALTLRVGASYPREDLLNRLERLGYERD---EEPG-YFLRGDTLELLEPGGEDPLRAEFFGDELDTLRRLLPGELTG-ERIQTFTLEPTADYLTEVKFLDAPEFYASSLGPLIDTL-----RDVAEWRGAGYRVMILVRHDRTAAYLADKLLGFLRAGGEGGFAIPETVVLTEDLIYGFVGKPVTDALGLHVGDYLIHPEHGIGQFQGLETRTVLGVTRDYLNLEYRGGARLAVPIEQLPVLRRHPGTTDDPPVLSSFDKKDWARAKEKARKNAEEVAARLLVQYAARQVTPGNSFPPQPEWDAQVERNFKFELTADQKTALKETMRDLEAPHPADRLISGDVGFGKTEVALRAAHRVVGHGKQVAMLVPTTLLAEQHTSTFVERFKDLPVRVEGLSRFTGDKQAKAILADLAAGKVDIIIGTHRLLSSDVQFKDLGLIIVDEEHRFGVGQKEKLRALRKAVDTLALSATPIPRTLYMSMVGLRDMSSIQTPPKGRKPIQTVLAPFDPVTVRDAILNEIERGGKVFYIHDRIASIGARSLYLRNLVPEARIGVAHGRMNEEELEEIMLGFEQGAFDVLLSTTIVETGLDIPEANTILIERADRLGLAQLYQLRGRVGRRQQTAYAYLFYPP--RMTENAQRRLWAIADLQDLGSGHLLAEKDMEIRGVGNILGEEQHGHVQAVSIDVYTEMLAEAVARLK-GPTVSIDLPINARLTPEYFGNEEERIATYGRLSEARTLQAVSRVERDLRKKYGPPTPEVQNFIDLAKLRLTAVAKRALSIGETMTHLQITFAY
>ACTINO135_NP_787310-NC_004572 trcF transcription-repair coupling factor {Tropheryma whipplei str. Twist} [Chromosome ]
ACPGGFSACKVASLV-SLLVILPSEDAC--FTDTLRTYLPESIILNFPEWDTLLHEQISPSPERVSARMEALHKILVVVASIKAFMQPIIS--DGNPPCLYFHTGGEYELSEIANILVAMSYSRTDLVGARGEFAIRGGILDIYPPTEKHPIRIEFFGRQLESMRHFRVSDQRSIG----PYVSNNAHVGMFAQMAPASEALIVYPTSLLHFMPGKSTDHIRNLQKSGWQIVLASTNNR----VYPTLDEVIDSYIQEGFSVPTFTLIGEHELFGKISRRAIDPINLAIDDYVVHEIHGIARFKGMCSRRPHAPEQEYLILEYAKADKLYIPTDQLSMISKYIG--SDRPTLSRIGGSDWALTKSRARKAISSIALDLVKLYSRRSITKGYAFSPDTPFQTHFENEFLYTETRDQEKTIVAVKADMENSKPMDRIISGDVGFGKTEIAMRAAFKAVQDNKQVAVLVPTTLLARQHIQTFCERFDKWPVTIASLSRFQSKSEIQKTICGISSGGIDIVIGTHMLLNKKIQFKDLGLLIIDEEHRFGVNHKEAIKKLKIGIDILAMSATPIPRTLEMSLMGIKEISTLSTPPENRMPILTHVGPYRDKQVIAAVRREIIRGGQVFYIHNDTATISRVAQRLEQLIPEARVVSAHAKLAERMLEKTVIDFWEGKYDILVCTTIIETGLDNANANTIIIDSAENYGLSQLHQLRGRVGRGTKRAYAYLFY--TSTLKDTAYKRLEAIARNNHLGAGAQIAMKDLELRGAGSLLGHAQSGHIASVGFDLYIRMVTDAISNFK-GNNLRLEIPVDASIPKAYVDSERLRIELYKKISEALSDADIKDIGDEILDRFGNLPSQVINLLELARLRILASSRGIDTLKQGGDVSPVSFS-
>ACTINO135_NP_789517-NC_004551 mfd transcription-repair coupling factor {Tropheryma whipplei TW08/27} [Chromosome ]
ACPGGFSACKVASLV-SLLVILPSEDAC--FTDTLRTYLPESIILNFPEWDTLLHEQISPSPERVSARMEALHKILVVVASIKAFMQPIIS--DGNPPCLYFHTGGEYELSEIANILVAMSYSRTDLVGARGEFAIRGGILDIYPPTEKHPIRIEFFGRQLESMRHFRVSDQRSIG----PYVSNNAHVGMFAQMAPASEALIVYPTSLLHFMPGKSTDHIRNLQKSGWQIVLASTNNR----VYPTLDEVIDSYIQEGFSVPTFTLIGEHELFGKISRRAIDPINLAIDDYVVHEIHGIARFKGMCSRRPHAPEQEYLILEYAKADKLYIPTDQLSMISKYIG--SDRPTLSRIGGSDWALTKSRARKAISSIALDLVKLYSRRSITKGYAFSPDTPFQTHFENEFLYTETRDQEKTIVAVKADMENSKPMDRIISGDVGFGKTEIAMRAAFKAVQDNKQVAVLVPTTLLARQHIQTFCERFDKWPVTIASLSRFQSKSEIQKTICGISSGGIDIVIGTHMLLNKKIQFKDLGLLIIDEEHRFGVNHKEAIKKLKIGIDILAMSATPIPRTLEMSLMGIKEISTLSTPPENRMPILTHVGPYRDKQVIAAVRREIIRGGQVFYIHNDTATISRVAQRLEQLIPEARVVSAHAKLAERMLEKTVIDFWEGKYDILVCTTIIETGLDNANANTIIIDSAENYGLSQLHQLRGRVGRGTKRAYAYLFY--TSTLKDTAYKRLEAIARNNHLGAGAQIAMKDLELRGAGSLLGHAQSGHIASVGFDLYIRMVTDAISNFKG-NNLRLEIPVDASIPKAYVDSERLRIELYKKISEALSDADIKDIGDEILDRFGNLPSQVINLLELARLRILASSRGIDTLKGGDVVSPVSFSD
>CHLAM447_P637060920 NP_296507 TC0124 transcription-repair coupling factor [Chlamydia muridarum Nigg]
NLHSGAKAFIVAKLFKSIVIIT-TPARVDDLFEDLTTLL-KESPLEFPTSEIDLSPKLV-NIDAVGKRDHILYSLVVCITTLKALLERTPSPESLLSDHLELKVGEELDPDTLVDLCKNLGYRHEALAREKGDFAFRGGIVDIFPLSSSEPFRIEFWGDRISSIRSYNPSDQLSTGKISQITISSA-TAIIPTD---------KLSHSLLDYFETFPLKTFQDF-DRTLSLALYSSNTKSLKEAHDLTASDCPKALSSSFALVEFAAISLSEFAANTTEEVYVPV---PGETVVHLHNGIGKFIGIEKKPNHNIETDYLVLEYADKARLYVPSDQAYLISRYVGASEKAPDLHHLNGAKWRRSRELSEKSVILYAEKLIQMEAQRSTANSFIYPTHGEEVIKFAESFPYEETPDQLKAIDQIYADMMSDKLMDRLICGDAGFGKTEIIMRAAVKAVCDGKQVIVMVPTTILANQHFETFSQRMAGLPITIGLLSRFSQGKAMKKTLEDVAQGRIDILIGTHKVINKSIEFHNPGLLIIDEEQRFGVKAKDALKERYPTIDCLTVSATPIPRTLYLSLSGARDLSLITMPPLDRLPVSTFVMEHTEETLSAAIRHELLRGGQVYVIHNRIEGIFRLGETIRTLIPEARIGVAHGQMHSDELANIFYKFKTQQTNVLVATALIENGIDIPNANTILIDHADKFGMADLYQMKGRVGRWNKKAYCYFLVPHLDRLSGPASKRLEALNK-QEYGGGMKIALHDLEIRGAGNILGTDQSGHISAVGFNLYCKLLKKAVAALKHKDDVRIEFPYHSRIPEDYIDLASMRIEFYQKIGNAESKEELEAIEEELRDRFGPLPEEVYWLFALAQIRLIALEYHLSSIKGTGNALYIQYHD
>CHLAM447_P637724211 YP_328575 CTA_0814 transcription-repair coupling factor [Chlamydia trachomatis A/HAR-13]
NLHSGARSFVIAKLFKSIVVIT-TLAKLDDLFEDLTTLL-AESPLEFPASEIDLSPKLV-NVDAVGKRDHILYSLVICVTTLKALSERTPSPESMIRDHLELRVGEELDPDTLLDLCKSLGYRHEALAREKGDFAFRGGIVDIFPLSSPEPFRIEFWGDRVSSIRSYNPSDQLSTGKLSQITISPA-TAIIPTN---------KLSHSLLDYFKAFPLKTFQDF-GRTLSLALYCSNTKSLKEAHDLAAADHPTTLSSSFALVEFAAVSLSEFAASTTEEVYIPV---PGETVVHLHNGIGKFIGIEKKPNHNIETDYLVLEYADKARLYVPSDQAYLISRYVGASEKAPDLHHLNGAKWRRSRELSEKSVILYAEKLIQMEAQRSTANSFIYPPHGEEVIKFAESFPYEETPDQLKAIDQIYADMMSDKLMDRLICGDAGFGKTEIIMRAAVKAVCDGKQVIVMVPTTILANQHFETFSQRMAGLPITIGLLSRFSQGKTMKKTLEDIAQGRIDILIGTHKVINKAIEFHNPGLLIIDEEQRFGVKAKDSLKERFPTIDCLTVSATPIPRTLYLSLSGARDLSLITMPPLDRLPVSTFVMEHSEETLSAAIRHELLRGGQVYVIHNRIESIFRLGETIRTLIPEARIGVAHGQMHANELASIFYKFKTQQTNVLVATALIENGIDIPNANTILIDHADKFGMADLYQMKGRVGRWNKKAYCYFLVPHLDRLSGPTSKRLEALNK-QEYGGGMKIALHDLEIRGAGNILGTDQSGHISAVGFNLYCKLLKKAVAALK-HDDIKIEFPYHARIPEDYIDLASMRIEFYQKIGNAESEEELEAIEEELRDRFGPSPEAISWLFALARIRLIAQEYHLSSIKGTGNALYIQYHD
>CHLAM447_P637005135 NP_220267 CT748 Transcription-Repair Coupling [Chlamydia trachomatis D/UW-3/CX]
NLHSGARSFVIAKLFKSIVVIT-TLAKLDDLFEDLTTLL-AESPLEFPASEIDLSPKLV-NGDAVGKRDHILYSLVICVTTLKALSERTPSPESMIRDHLELRVGEELDPDTLLDLCKSLGYRHEALAREKGDFAFRGGIVDIFPLSSPEPFRIEFWGDRVSSIRSYNPSDQLSTGKLSQITISPA-TAIIPTN---------KLSHSLLDYFKAFPLKTFQDF-GRTLSLALYCSNTKSLKEAHDLAAADHPTTLSSSFALVEFAAVSLSEFAASTTEEVYIPV---PGETVVHLHNGIGKFIGIEKKPNHNIETDYLVLEYADKARLYVPSDQAYLISRYVGASEKAPDLHHLNGAKWRRSRELSEKSVILYAEKLIQMEAQRSTANSFIYPPHGEEVIKFAESFPYEETPDQLKAIDQIYADMMSDKLMDRLICGDAGFGKTEIIMRAAVKAVCDGKQVIVMVPTTILANQHFETFSQRMAGLPITIGLLSRFSQGKTMKKTLEDIAQGRIDILIGTHKVINKAIEFHNPGLLIIDEEQRFGVKAKDSLKERFPTIDCLTVSATPIPRTLYLSLSGARDLSLITMPPLDRLPVSTFVMEHSEETLSAAIRHELLRGGQVYVIHNRIESIFRLGETIRTLIPEARIGVAHGQMHANELASIFYKFKTQQTNVLVATALIENGIDIPNANTILIDHADKFGMADLYQMKGRVGRWNKKAYCYFLVPHLDRLSGPTSKRLEALNK-QEYGGGMKIALHDLEIRGAGNILGTDQSGHISAVGFNLYCKLLKKAVAALKHKDDIKIEFPYHARIPEDYIDLASMRIEFYQKIGNAESEEELEAIEEELRDRFGPSPEAISWLFALARIRLIAQEYHLSSIKGTGNALYIQYHD
>CHLAM447_P641533190 YP_001654208 CTL0117 transcription-repair coupling factor [Chlamydia trachomatis 434/Bu]
NLHSGARSFVIAKLFKSIVVIT-TPAKLDDLFEDLTTLL-AESPLEFPASEIDLSPKLV-NVDAVGKRDHILYSLVICVTTLKALLERTPSPESMIRDHLELRVGEELDPDTLLDLCKSLGYRHEALAREKGDFAFRGGIVDIFPLSSPEPFRIEFWGDRVSSIRSYNPSDQLSTGKLSQITISPA-TAIIPTD---------KLSYSLLDYFKAFPLKTFQDF-GRTLSLALYCSNTKSLKEAHDLAAADHPTTLSSSFALVEFAAVSLSEFAASTTEEVYIPV---PGETVVHLHNGIGKFIGIEKKPNHNIETDYLVLEYADKARLYVPSDQAYLISRYVGASEKAPDLHHLNGAKWRRSRELSENSVILYAEKLIQMEAQRSTANSFIYPPHGEEVIKFAESFPYEETPDQLKAIDQIYADMMSDKLMDRLICGDAGFGKTEIIMRAAVKAVCDGKQVIVMVPTTILANQHFETFSQRMAGLPITIGLLSRFSQGKTMKKTLEDIAQGRIDILIGTHKVINKAIEFHNPGLLIIDEEQRFGVKAKDSLKERFPTIDCLTVSATPIPRTLYLSLSGARDLSLITMPPLDRLPVSTFVMEHSEETLSAAIRHELLRGGQVYVIHNRIESIFRLGETIRTLIPEARIGVAHGQMHADELASIFYKFKTQQTNVLVATALIENGIDIPNANTILIDHADKFGMADLYQMKGRVGRWNKKAYCYFLVPHLDRLSGPTSKRLEALNK-QEYGGGMKIALHDLEIRGAGNILGTDQSGHISAVGFNLYCKLLKKAVAALK-HDDIKIEFPYHARIPEDYIDLASMRIEFYQKIGNAESEEELEAIEEELRDRFGPSPEAISWLFALARIRLIAQEYHLSSIKGTGNALYIQYHD
>CHLAM447_P641532273 YP_001653220 CTLon_0117 transcription-repair coupling factor [Chlamydia trachomatis L2b/UCH-1/proctitis]
NLHSGARSFVIAKLFKSIVVIT-TPAKLDDLFEDLTTLL-AESPLEFPASEIDLSPKLV-NVDAVGKRDHILYSLVICVTTLKALLERTPSPESMIRDHLELRVGEELDPDTLLDLCKSLGYRHEALAREKGDFAFRGGIVDIFPLSSPEPFRIEFWGDRVSSIRSYNPSDQLSTGKLSQITISPV-TAIIPTD---------KLSYSLLDYFKAFPLKTFQDF-GRTLSLALYCSNTKSLKEAHDLAAADHPTTLSSSFALVEFAAVSLSEFAASTTEEVYIPV---PGETVVHLHNGIGKFIGIEKKPNHNIETDYLVLEYADKARLYVPSDQAYLISRYVGASEKAPDLHHLNGAKWRRSRELSENSVILYAEKLIQMEAQRSTANSFIYPPHGEEVIKFAESFPYEETPDQLKAIDQIYADMMSDKLMDRLICGDAGFGKTEIIMRAAVKAVCDGKQVIVMVPTTILANQHFETFSQRMAGLPITIGLLSRFSQGKTMKKTLEDIAQGRIDILIGTHKVINKAIEFHNPGLLIVDEEQRFGVKAKDSLKERFPTIDCLTVSATPIPRTLYLSLSGARDLSLITMPPLDRLPVSTFVMEHSEETLSAAIRHELLRGGQVYVIHNRIESIFRLGETIRTLIPEARIGVAHGQMHADELASIFYKFKTQQTNVLVATALIENGIDIPNANTILIDHADKFGMADLYQMKGRVGRWNKKAYCYFLVPHLDRLSGPTSKRLEALNK-QEYGGGMKIALHDLEIRGAGNILGTDQSGHISAVGFNLYCKLLKKAVAALKHKDDIKIEFPYHARIPEDYIDLASMRIEFYQKIGNAESEEELEAIEEELRDRFGPSPEAISWLFALARIRLIAQEYHLSSIKGTGNALYIQYHD
>CHLAM447_P637042249 NP_445512 CP0975 transcription-repair coupling factor [Chlamydophila pneumoniae AR39]
NIHPGATAFLAAKMFHSVIMIT-TPARLDDLFENLRTFL-DQAPVEFPSSEIDLSPKLV-NIDAVGKRDHLLYSLIFCVTTLKALLEKTRSPQATSQQHLDLAVGDVLDPEATTELCKSLGYSQVMLTSEKGEFSCRGGIVDIFPLSSPEPFRIEFWGEKIISIRSYNPSDQLSTGKVSKISISPAYTEEASGG---------NYSHSLLDYFSTPPLQHLQEYHGKPLKLAIYSTKTKSLKEARALAETEKTGNLTSSFALVNFAAISLSEFASTTTEEVFVPI---PGETVVHIHNGIGKFLGIEKKPNHNIETDYLVLEYADKARLYVPSNQAYLISRYVGTSDKAADLHHLNSSKWKRSRDLTEKSLIVYAEKLLQLEAQRSTTPAFVYPPHGESVIKFAETFPYEETPDQLKTIDQIYNDMMSPKLMDRLICGDAGFGKTEVIMRAAVKAVCDGRQVIVMVPTTILATQHYETFKERMAGLPIEIAVLSRFSQAKVQKLICEQVASGQIDIIIGTHKLINKSLEFKNPGLLIIDEEQRFGVKVKDNLKERYPMIDCLTVSATPIPRTLHMSLSGARDLSVIAMPPLDRLPVSTFVMEHNTETLTAALRHELLRGGQAYVIHNRIESIYTLAETIRNLIPEARIGVAHGQMGAEDLSNIFTKFKNQKTDILVATALIENGIDIPNANTILIDHADKFGMADLYQMKGRVGRWNKKAYCYFLVPHLDRLSGPAAKRLAALNK-QEYGGGMKIALHDLEIRGAGNILGTDQSGHIGTIGFNLYCKLLKKAVSALK--DDVKIEFPYNSRIPDTYIETGSMRIEFYQKIGNAESSEELTAIQEEMRDRFGPLPQEICWLFALAEIRLFALQHGISSIKGTANALYVQKCL
>CHLAM447_P637024411 NP_225086 CPn0891 Transcription-Repair Coupling [Chlamydophila pneumoniae CWL029]
NIHPGATAFLAAKMFHSVIMIT-TPARLDDLFENLRTFL-DQAPVEFPSSEIDLSPKLV-NIDAVGKRDHLLYSLIFCVTTLKALLEKTRSPQATSQQHLDLAVGDVLDPEATTELCKSLGYSQVMLTSEKGEFSCRGGIVDIFPLSSPEPFRIEFWGEKIISIRSYNPSDQLSTGKVSKISISPAYTEEASGG---------NYSHSLLDYFSTPPLQHLQEYHGKPLKLAIYSTKTKSLKEARALAETEKTGNLTSSFALVNFAAISLSEFASTTTEEVFVPI---PGETVVHIHNGIGKFLGIEKKPNHNIETDYLVLEYADKARLYVPSNQAYLISRYVGTSDKAADLHHLNSSKWKRSRDLTEKSLIVYAEKLLQLEAQRSTTPAFVYPPHGESVIKFAETFPYEETPDQLKTIDQIYNDMMSPKLMDRLICGDAGFGKTEVIMRAAVKAVCDGRQVIVMVPTTILATQHYETFKERMAGLPIEIAVLSRFSQAKVQKLICEQVASGQIDIIIGTHKLINKSLEFKNPGLLIIDEEQRFGVKVKDNLKERYPMIDCLTVSATPIPRTLHMSLSGARDLSVIAMPPLDRLPVSTFVMEHNTETLTAALRHELLRGGQAYVIHNRIESIYTLAETIRNLIPEARIGVAHGQMGAEDLSNIFTKFKNQKTDILVATALIENGIDIPNANTILIDHADKFGMADLYQMKGRVGRWNKKAYCYFLVPHLDRLSGPAAKRLAALNK-QEYGGGMKIALHDLEIRGAGNILGTDQSGHIGTIGFNLYCKLLKKAVSALKKHDDVKIEFPYNSRIPDTYIETGSMRIEFYQKIGNAESSEELTAIQEEMRDRFGPLPQEICWLFALAEIRLFALQHGISSIKGTANALYVQKCL
>CHLAM447_P637046234 NP_300948 CPj0891 transcription-repair coupling [Chlamydophila pneumoniae J138]
NIHPGATAFLAAKMFHSVIMIT-TPARLDDLFENLRTFL-DQAPVEFPSSEIDLSPKLV-NIDAVGKRDHLLYSLIFCVTTLKALLEKTRSPQATSQQHLDLAVGDVLDPEATTELCKSLGYSQVMLTSEKGEFSCRGGIVDIFPLSSPEPFRIEFWGEKIISIRSYNPSDQLSTGKVSKISISPAYTEEASGG---------NYSHSLLDYFSTPPLQHLQEYHGKPLKLAIYSTKTKSLKEARALAETEKTGNLTSSFALVNFAAISLSEFASTTTEEVFVPI---PGETVVHIHNGIGKFLGIEKKPNHNIETDYLVLEYADKARLYVPSNQAYLISRYVGTSDKAADLHHLNSSKWKRSRDLTEKSLIVYAEKLLQLEAQRSTTPAFVYPPHGESVIKFAETFPYEETPDQLKTIDQIYNDMMSPKLMDRLICGDAGFGKTEVIMRAAVKAVCDGRQVIVMVPTTILATQHYETFKERMAGLPIEIAVLSRFSQAKVQKLICEQVASGQIDIIIGTHKLINKSLEFKNPGLLIIDEEQRFGVKVKDNLKERYPMIDCLTVSATPIPRTLHMSLSGARDLSVIAMPPLDRLPVSTFVMEHNTETLTAALRHELLRGGQAYVIHNRIESIYTLAETIRNLIPEARIGVAHGQMGAEDLSNIFTKFKNQKTDILVATALIENGIDIPNANTILIDHADKFGMADLYQMKGRVGRWNKKAYCYFLVPHLDRLSGPAAKRLAALNK-QEYGGGMKIALHDLEIRGAGNILGTDQSGHIGTIGFNLYCKLLKKAVSALKKHDDVKIEFPYNSRIPDTYIETGSMRIEFYQKIGNAESSEELTAIQEEMRDRFGPLPQEICWLFALAEIRLFALQHGISSIKGTANALYVQKCL
>CHLAM447_P637443275 NP_877194 CpB0922 transcription-repair coupling factor [Chlamydophila pneumoniae TW-183]
NIHPGATAFLAAKMFHSVIMIT-TPARLDDLFENLRTFL-DQAPVEFPSSEIDLSPKLV-NIDAVGKRDHLLYSLIFCVTTLKALLEKTRSPQATSQQHLDLAVGDVLDPEATTELCKSLGYSQVMLTSEKGEFSCRGGIVDIFPLSSPEPFRIEFWGEKIISIRSYNPSDQLSTGKVSKISISPAYTEEASGG---------NYSHSLLDYFSTPPLQHLQEYHGKPLKLAIYSTKTKSLKEARALAETEKTGNLTSSFALVNFAAISLSEFASTTTEEVFVPI---PGETVVHIHNGIGKFLGIEKKPNHNIETDYLVLEYADKARLYVPSNQAYLISRYVGTSDKAADLHHLNSSKWKRSRDLTEKSLIVYAEKLLQLEAQRSTTPAFVYPPHGESVIKFAETFPYEETPDQLKTIDQIYNDMMSPKLMDRLICGDAGFGKTEVIMRAAVKAVCDGRQVIVMVPTTILATQHYETFKERMAGLPIEIAVLSRFSQAKVQKLICEQVASGQIDIIIGTHKLINKSLEFKNPGLLIIDEEQRFGVKVKDNLKERYPMIDCLTVSATPIPRTLHMSLSGARDLSVIAMPPLDRLPVSTFVMEHNTETLTAALRHELLRGGQAYVIHNRIESIYTLAETIRNLIPEARIGVAHGQMGAEDLSNIFTKFKNQKTDILVATALIENGIDIPNANTILIDHADKFGMADLYQMKGRVGRWNKKAYCYFLVPHLDRLSGPAAKRLAALNK-QEYGGGMKIALHDLEIRGAGNILGTDQSGHIGTIGFNLYCKLLKKAVSALKKHDDVKIEFPYNSRIPDTYIETGSMRIEFYQKIGNAESSEELTAIQEEMRDRFGPLPQEICWLFALAEIRLFALQHGISSIKGTANALYVQKCL
>CHLAM447_P637382691 YP_220231 CAB843 putative transcription-repair coupling factor [Chlamydophila abortus S26/3]
NILPGARSFLAAKLFHSVVMIT-TRSRIDDLFEDLASFL-GFPPVEFPSSEIDLSPKLV-NIDAVGKRDKILYDLIFCVTTLKALLEKTRSPKDTAHQHLDIQVGDVLDPDIMIDLCKNLGYRHETLASDKGEFAYRGGIIDIFPLSSQEPFRIEFWGEKIISIRPFNPSDQLSTGKVSQLSISPA-TKDSGTE---------VLSHCLLDYFATPPTQKLQEYQGQPFNVALYNTKAKALKEARALIETEKSGNLSSSFALVNFAAISLAEFASTTTEEVFVPI---PGETVVHLHNGIGKFIGMEKKPNHNIETDYLVLEYADKARLYVPSDQAYLISRYVGISDKTPDLHNLNGSKWKRSRDLSEKSLVLYAEKLLQLEAQRSTTPAFIYPPHGEEVIKFEESFPYEETPDQLKAIEQIYSDMMSDKLMDRLICGDAGFGKTEVIMRAAVKAVCDGRQVIVMVPTTILANQHYETFTQRMAGLPINIAVLSRFSEGKALKKIFEDTAQGNVDILIGTHKLINKNLEFKNPGLLIIDEEQRFGVKVKDFLKERYPTIDCLTVSATPIPRTLYMSLSGARDLSLITMPPLDRLPVSTFVLEHNEETVSAALRHELLRGGQAYVIHNLIESIFRLGNTIRTLVPEARIAVAHGQMSSDELASIFQKFKDKETNILVATALIENGIDIPNANTILVDHADKFGMADLYQMKGRVGRWNRKAYCYFLVSHLDRLSGPAAKRLQALNK-QEYGGGMKIALHDLEIRGAGNILGTDQSGHISAIGFNLYCKLLKKTVAALKNNDDVKIEFPYKSRIPDTYIDLASLRIEFYQKIGGAEDAEQLDFIKEEMRDRFGPLPEEVLWLFALAHLRLFALQHNISSIKGTGNALYIQQRH
>CHLAM447_P637251171 NP_829740 CCA00877 transcription-repair coupling factor [Chlamydophila caviae GPIC]
NIRPGARGFLAAKFF-ESVVMITTRARIDDLFEDLSSFL-GCAPVEFPSSEIDLSPKLV-NIDAVGKRDKVLYELLFCITTLKALLEKTRSPKDTGHQHLDLQVGDVLDPEMMIDLCKNLGYRHETLASDKGEFAYRGGIIDIFPLSSQEPFRIEFWGEKIISIRPFNPSDQLSTGKVSKISISPA-----TKDEISGTLSSLPNRFLSITDLLQSPTQKLQEYVPHKGQPFNVALYNTKAKSLKEARALIKPGNLSTSFALVEFAAISLAEFSATYFSVTTEEVFVIPGETVVHLHNGIGKFIGIEKK-PHNIETDYLVLEYADKARLYVPSDQAYLISRYVGASDKAPDLHNLNGSKWRRSRDLSEKSLVLYAEKLLQLEAQRSTIPSFIYPPHGEEVIKFAENFPYEETPDQLKAIEQIYSDMMSDKLMDRLICGDAGFGKTEVIMRAAVKAVCDGRQVIVMVPTTILANQHYETFSQRMAGLPINIAVLSRFSERKSMKKIFEDTAKGDIDILIGTHKLINKNLEFKNPGLLIIDEEQRFGVKVKDFLKERYPKVDCLTVSATPIPRTLYMSLSGARDLSLITMPPLDRLPVSTFVLEHNEETLSAALRHELLRGGQAYVIHNRIESIFRLGNTIRTLIPEARIAVAHGQMSPDELASIFQKFKDQEINILVATALIENGIDIPNANTILVDQADKFGMADLYQMKGRVGRWNRKAYCYFLVSHLDRLSGPAAKRLEALNK-QEYGGGMKIALHDLEIRGAGNILGTDQSGHISAIGFNLYCKLLKKTVAALKNNDDVKIEFPYKSRIPDTYIDLASIRIEFYQKIGGAEDAEQLELIKEEMRDRFGPLPEEVLWLFALAQVRLFALHHNISSIKGTGNALYI---Q
>CHLAM447_P637908545 YP_515056 CF0139 transcription-repair coupling factor-superfamily II helicase [Chlamydophila felis Fe/C-56]
NIRPGARGFLAAKFF-KSVIMITTRSCIDDLLEDLSSFL-GFPPLEFPSSEIDLSPKLV-NIDAVGKRDKILYELVFCVTTLKALLEKTRSPKDTVHQHLDIQVGDLLDPDMMIDLCKNLGYRHETLARDKGEFAYRGGIIDIFPLSSQEPFRIEFWGEKIISIRPFNPSDQLSTGKVSKLSISPA-----TKDEISGTLSSLPNRFLPIQYLLQSPTQKLQEYIPNK-EPLNIAVYNTKSKSLKEARALIKSGNLSSSFALVKFAAISLSEFTSTYFSVTTEEVFVIPGETVVHLHNGIGKFIGMEKK-PHNIETDYLVLEYADKARLYVPSDQAYLISRYVGTSEKTPDLHNLNGSKWKRSRDLSEKSLVLYAEKLLQLEAQRSTAPSFIYPPHGEEVMKFAERFPYEETPDQLKAIEQIYSDMMSDKLMDRLICGDAGFGKTEVIMRAAVKAVCDGRQVIVMVPTTILANQHYETFSQRMAGLPIKIAVLSRFSEGKAKKKIFEDTAKGDVDILIGTHKLINKNLEFKNPGLLIIDEEQRFGVKVKDFLKERYPMVDCLTVSATPIPRTLYMSLSGARDLSLITMPPLDRLPVSTFILEHNDETLSAALRHELLRGGQAYVIHNRIESIFRLGNTIRTLVPEARIAVAHGQMSSDELASIFQKFKDQEINVLVATALIENGIDIPNANTILVDQADKFGMADLYQMKGRVGRWNRKAYCYFLVPHLDRLSVPAAKRLEALNK-QEYGGGMKIALHDLEIRGAGNILGTDQSGHISAIGFNLYCKLLKKTVAALKNNDDVKIEFPYKSRIPDTYIDLASMRIEFYQKIGGAEDAEQLDLIKEEMRDRFGPLPDEVLWLFALAQLRLFALKHNISSIKGTGNALYIQQNH
>DELTA20_P637484315 NP_970594 Bd3893 transcription-repair coupling factor [Bdellovibrio bacteriovorus HD100]
AASPLALAYFLSQTYKPHLVVVGSHREAVTLQALLEFFDPSRQSHILPAFDVSPYSGLYPNTQVVADRVRFLAKAEIFISSVDALMQKTLPVKILKDHSKTVRAGDE-LPENLSDYFSSLGYTAAPMVEDKGQFAVRGGIVDIYPPTENQPVRMDLFGDQVESLRHFSVADQRSSDEIQSFVLTPAREVLYRDEAFPGIEFLLPYFYTPADHFPGALNNKLHRWRDEGYRIFVSTKNQSHIDRLSLVFEKIVPRYLAESLRLEEIIFLRDEDFYGKKQAKRLSFGDLKPGDLVVHTKHGIGQYEGLKIMNISGVESEYIQVGYKDKDKLYLPVYRVGQLQKFSG--AGTSILDKLGGTAWEKTKAKVKSHVRDIAADLLTLYAKRAEMHRPAFVIKEDEVLMFENGFPYEETDDQLRAINDIRKDLKSTKPMDRLVCGDVGFGKTEVAMRAAFFAIQARKQVAVLAPTTVLTFQHFETFKKRFEGWPVDIRVLNRFVTPAEVKKTLQDLKDGKVDLIVGTHKLLGSSIAYKDLGLLIIDEEQKFGVTHKEKIKKIKTSVDTLTLSATPIPRTLNMALVGIRDLSLINTAPVDRLPTRTFVTKFDPETIRKAITAEISRGGQVYFIHNRIESIYGLVDEIRQIVPEARIRVAHGQMEEHELEKAMLAFFHHEIDVLVCTAIVESGMDVPRANTMFIDTAHLFGLSQLYQLRGRVGRSKTRAYCYLMMPRNHKLDKEQQERLKIIQENTALGSGIKIAQYDLELRGSGNILGEEQSGHVNSVGYEMYMDLLNEALAEAKGELDPELNLKIPALIPDAYIKDIRIRLGYYKALADITSNEDLDRIEEELRDQFGPIPEQTVNLMGLMLIRRQCKELGVRDISAGLKSISLIFTE
>ACTINO135_GEBA2501564030 Afer_1594 transcription-repair coupling factor [Acidimicrobium ferrooxidans ICP, DSM 10331]
DPPALSAAGVALAWHRRMVVVAEGDREAEAIANDLRWWLPRIPVALLPPWDTLPFERVVPSMGTTAARLRALASIIVVVTTVRAALTKLVA-SAARLERLIVARGDELVRDELITWLEDAGYVREPQVSAAGEYAVRGSIVDVADPGLASPVRIDLFGDEVDRLAFFDPTTQRSVGDLERVELFPAREVRIDTDEPP--EPLVPLVLTVLDIVDEADLGRIRSARRDGVHVVVATHGSERARHVAQRLGEVAAGDLVESVELEPLVVIADASLV--RTTGGLSFDDLVEGSFVVHEAYGVARYRGLVRQVVDGVSREYLELEFASADRIFLPFEHLALVAPYVG--SEEPRLTRLRGGDWQRQVHRARRAAQEVAQELVVLYQRRLAATGSSITPDPVLLSEFAERFPYELTRDQERTIAEVLADLAKPVPMDRLVCGDVGFGKTEIALRAAFAVASEGRQVLVLAPTTLLAAQHAEVFRERFEGTPIRVGMLSRLSTAREAASIRAELASGELDVCIATHAALGASTRFARLGLLVIDEEQRFGVRHKEQLKEAFPGVDVLVLSATPIPRSLELSLVGIRDLSVLRTAPVDRHPILTHVGPFDPAVVTEAIRRELLREGQVFFVHNRVRDIEASARLVADLVPEARVLVAHGQLPPAALERTMAQFWHGEADVLVATTIVENGIDLARANTLIVDRAEQLGLAQLHQLRGRVGRSGRQAYAYLLTSTTGGISDIALERLRTVAENTDLGAGYRIAMRDLELRGAGTVLGMRQSGHVSEVGYELYVRLVAEEVARM-DGREVALDVPVSALLAEDYVAEAETRMDLYRRLARARSQAEFDQFLEELRDRFGPPPAEALALVSLAKARRRLATLGADLVRRNPRSARLELVV
>SPIRO157_P637037989 NP_212757 BB0623 transcription-repair coupling factor (mfd) [Borrelia burgdorferi B31]
GYEGFFKAFLIKKIKYKIILIVKDEHTLDKIKNDLQVITN--QIFELNYFSPLVYKGIGSKSTIFNERIKFLFNFGIYITVLKSLLSKIPDKNTLLKNIYKIEKNTNINTADIEKTLITLGYEKTLRVTIPGEFTVKGEIIDIYPFGEQNPIRIALNFDKIEEIKKFNPLTQLKHDNEIEFQILPKKEIIWDDKETKTEEMFYPLVAYLGDEIEKHTPEEFENWLKNGFKIIIAAESESQKEKLKYIFKEIEVLKISSSLIIEKIAIILESNIFNTKTKAIDSFVEIEKNSHVVHINHGIGIFRQIKRIKTSSLEKDYIEIEYAEGEKLFIPIEQTNLIQKYIGSDPKNIKLDKISSKTWIKNKANAKKRIEEIADKLIELYSKRESIKGIKYPEDNELQLLFESEFPYDETPDQIRAIKEIKEDMMSFKVMDRLLCGDVGFGKTEVAMRAAFKAVMGNKQVIVLSPTTILAEQHFNTFKKRFKNFPIKIEVLSRFIKNNAESRILKELKSGKIDIIIGTHKILSKKFTCKNLGLIIIDEEQRFGVKEKEKLKEIRISVDCLALSATPIPRSLHMSLIKLRDISVLKIPPQNRVKIEAYLESFSELLIKHAIESELSRDGQVFLVNHNIEELYYLKTLIERLTPYARIAIIHGKLTGEEIENIMHNFIKKAYQILLATTIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSQKAYAYFLYQDSEKLNERSIERLRAITEFSELGAGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTMLNKAIE--KKGEEVDIKINYSGFIPENYAKNEQDKILIYKKIFKIQTEEESKKIRSELHNDFGPIPEEINSLLMLAELKILAKDLNITKLKEKNRALEIEYKE
>SPIRO157_P643478055 YP_002375126 BbuZS7_0642 transcription-repair coupling factor [Borrelia burgdorferi ZS7]
GYEGFFKAFLIKKIKYKIILIVKDEHTLDKIKNDLQVITN--QIFELNYFSPLVYKGIGSKSTIFNERIKFLINFGIYITVLKSLLSKIPDKNTLLKNIYKIEKNTNINTADIEKTLITLGYEKTLRVTIPGEFTVKGEIIDIYPFGEQNPIRIALNFDKIEEIKKFNPLTQLKHDNEIEFQILPKKEIIWDDKETKTEEMFYPLVAYLGDEIEKHTPEEFENWLKNGFKIIIAAESESQKEKLKYIFKEIEVLKISSSLIIEKIAIILESNIFNTKTKAIDSFVEIEKNSHVVHINHGIGIFRQIKRIKTSSLEKDYIEIEYAEGEKLFIPIEQTNLIQKYIGSDPKNIKLDKISSKTWIKNKANAKKRIEEIADKLIELYSKRESIKGIKYPEDNELQLLFESEFPYDETPDQIRAIKEIKEDMMSFKVMDRLLCGDVGFGKTEVAMRAAFKAVMGNKQVIVLSPTTILAEQHFNTFKKRFKNFPIKIEVLSRFIKNNAETRILKELKIGKIDIIIGTHKILSKKFTCKNLGLIIIDEEQRFGVKEKEKLKEIRISVDCLALSATPIPRSLHMSLIKLRDISVLKIPPQNRVKIEAYLESFSELLIKHAIESELSRDGQVFLVNHNIEELYYLKTLIERLTPYARIAIIHGKLTGEEIENIMHNFIKKAYQILLATTIIENGIDIPNVNTIIINNANKFGLAQLYQLKGRVGRGSQKAYAYFLYQDSEKLNERSIERLRAITEFSELGAGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTMLNKAIEKKM--EEVDIEINYSGFIPENYAKNEQDKILIYKKIFKIQTEEESKKIRSELHNDFGPIPEEINSLLMLAELKILAKDLNITKLKEKNRALEIEYKN
>SPIRO157_P639638259 YP_710072 BAPKO_0663 transcription-repair coupling factor [Borrelia afzelii PKo]
GYEGFFKAFLIKKIKYKIILIVKDEHTLDKIKNDLKVITN--QIFEFNYFSPLVYKGIGSKSTIFNERIKFLINFGIYITVLKSLLSKIPNQNTLLKNIYKIEKNTKIDTVDIEKTLITLGYEKTLRVTIPGEFTIKGEIIDLYPFGEQNPIKIVLNFDKIEEIRKFNPLTQLKQDNEIELQILPKKEIIWKNEETKTEEMFYPLVAYLSDEIEKHTPEEFKNWLKNGFKIIIAAESESQKEKLKYIFKEIEVLKISSSLIIEEIAIILESNIFNTKTKAIASFIEIEKNSHVVHINHGIGIFRQIKRIKTSSLEKDYIEIEYAEGERLFIPIEQTNLIQKYIGSDPKNIKLDKIGSKTWIKNKVNAKKRIEEIAEKLIELYSKRESIKGIKYPKDNELQLLFESEFPYDETPDQITAIKEIKEDMMSFKVMDRLLCGDVGFGKTEVAMRAAFKAVMGNKQVVVLSPTTILAEQHFNTFKKRFKNFPIKIEVLSRFIKNNSEKRILKELKSGEIDIIIGTHKILSKKFSCKNLGLIIIDEEQRFGVKEKEKLKEIRISVDCLALSATPIPRSLHMSLIKLRDISVLKIPPKNRVKIEAYLESFSELLIKHAIENELSRDGQVFLVNHNIEELHYLKTLIEKLTPYARIAIIHGKLTGIEIENIMHDFIKKAYQILLATTIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSKKAYAYFLYQDSEKLNERSIERLRAITEFSDLGSGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTMLNKAIE--KKGEEVDIEINYSGFIPDNYIKNEQTKILIYKKIFEIQTEEESKKIRSEIHDNFGPIPKEINSLLMLAELKILAKKLNIIKIKETNKTLEIEYKE
>SPIRO157_P643693158 YP_073064 BG0642 transcription-repair coupling factor [Borrelia garinii PBi, OspA]
GYEGFFKAFLIKKIKYKIILIVKDEHTLDNIKNDLKVITN--QIFELSYFSPLVYKGIGSKSTIFNERIKFLINFGIYITVLKSLLSKIPDKNTLLNNICKIEKNTKINRKDIEKTLITLGYEKTLRVTIPGEFAIKGEIIDLYPFGEESPIKIVLNFDKIEEIRKFNPLTQLKKDNEIEFQILPKKEIIWKNEEAKTEEMFYPLVAYLSDEIEKQTPEEFKNWLKNGFKIIIAAESESQKEKLKYIFKEIEVLKISSSLIIEEIAIILESNIFNTKTKAIDSFIEIEKNSHIVHINHGIGIFRQIKRIKTSSLEKDYIEIEYAEGEKLFIPIEQTNLIQKYIGSNPKNIKLDKISSKTWIKNKANAKKRIDEIADKLIELYSKRESIKGIKYPEDNELQLLFESEFPYDETPDQITAIKEIKEDMMSFKVMDRLLCGDVGFGKTEVAMRAAFKAVMGNKQVIVLSPTTILAEQHFNTFKKRFKNFPVKIEVLSRFIKNNSEKRILKELKSGEIDIIIGTHKILSKKFTCKNLGLIIIDEEQRFGVKEKEKLKEIRISVDCLTLSATPIPRSLHMSLIKLRDISVLKIPPKNRVKIEAYLESFSELLIKHAIESELSRDGQVFLVNHNIEELHYLKTLIEKLTPYARIAIIHGKLTGDEIENIMHNFIKKAYQILLATTIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSKKAYAYFLYQDSEKLNERSIERLRAITEFSDLGAGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDCYLTMLNKAIEKK-MGEEVDIEINHSGFIPDNYAKNEKDKILIYKKIFEIQTEEESKKIRSEIHDNFGPIPKEINSLLILAELKILAKKLNITKLKETNKTLEIEYKN
>SPIRO157_P643356766 YP_002222264 BDU_627 transcription-repair coupling factor [Borrelia duttonii Ly]
GYEKFFKAFLIHKIKYKVILIVKNENISDKIKNDLTQITD--QIYELNYFSPLIYKGIGSKSKVFCDRVKFLINFGIYIVSLKSLLSKIPTKKDLFNNIYKIQTDKIINIENFEKKLIKMGYEKTMRVTLPGEFTINNKIIDIHSFNHKEPTRISLNNDKIKQINYFNPLNQLKQKNAIEFNIIPKKEIIWNKENARTEEVFYPFLGLLSQEINENTIQEIQNWIDNGFQVIITAESNSQKEKLKYIFQDVEVIKISSSLIINEIAIITEADIFNKKTKPIDSFIEIEKNSHIVHINHGIGIFRQIKRIKTSLIEKDYIEIEYADNEKLFIPIEQTHLIQKYIGNETQNIKLDRISSKTWEKKKVYATKKIDKIADQLVSLYAERENITGFQYPQDDEWQLLFESEFPYDETPDQLTAISEIKQDMMSSKVMDRLLCGDVGFGKTEVAMRAAFKAVMGKKQVAILSPTTILTEQHFNTFKKRFKNFPIQIAMISRFITKSKEKEILRNLETGNIDIIIGTHKILSKKITYKDLGLIIIDEEQRFGVKEKEKLKEIKVSVDSLALSATPIPRSLHMSLIKLRDISVLKTPPQNRIKIETYVEEFSEILIKHAIENELSRDGQVFFVHHNIQELDSIKAMIEKVVPYARIATIHAKLTGEQIENIMQDFINKSYQVLLATTIIENGIDIENANTIIINNANRFGLAQLYQLRGRVGRSSKKAFAYFLYKENSNLNEGAIERLRAISEFSELGAGFQIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTMLNKAIEKR-MGNEINIEINYNGFIPNSYINNEQHKISIYKKISAIQSEEENNKIRSEIYDRFGPIPNELNSLLILSELKLLAQKLNITSLKERNGLLEIEYLD
>SPIRO157_P643357610 YP_002223073 BRE_630 transcription-repair coupling factor [Borrelia recurrentis A1]
GYEKFFKAFLIHKIKYKVILIVKNENISDEIKNDLTQITD--QIYELNYFSPLIYKGIGSKSKVFCDRVKFLINFGIYIVSLKSLLSKIPTKKDLFNNIYKIQTDKIINIENFEKKLIKMGYEKTMRVTLPGEFTINNKIIDIHSFNHKEPTRISLNNDKIKQINYFNPLNQLKQKNAIEFNIIPKKEIIWNKENARTEEVFYPLLGLLSQEINENTIQEIQNWIDNGFQVIITAESNSQKEKLKYIFQDVEVIKISSSLIINEIAIITEADIFNKKTKPIDSFIEIEKNSHIVHINHGIGIFRQIKRIKTSLIEKDYIEIEYADNEKLFIPIEQTHLIQKYIGNETQNIKLDRISSKTWEKKKVYATKKIDKIADQLVSLYAERENITGFQYPQDDEWQLLFESEFPYDETPDQLTAISEIKQDMMSSKVMDRLLCGDVGFGKTEVAMRAAFKAVMGKKQVAILSPTTILTEQHFNTFKKRFKNFPIQIAMISRFITKSKEKEILRNLETGNIDIIIGTHKILSKKITYKDLGLIIIDEEQRFGVKEKEKLKEIKVSVDSLVLSATPIPRSLHMSLIKLRDISVLKTPPQNRIKIETYVEEFSEILIKHAIENELSRDGQVFFVHHNIQELDSIKAMIEKVVPYARIATIHAKLTGEQIENIMQDFINKSYQVLLATTIIENGIDIENANTIIINNANRFGLAQLYQLRGRVGRSSKKAFAYFLYKENSNLNEGAIERLRAISEFSELGAGFQIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTMLNKAIEKR-MGNEINIEINYNGFIPNSYINNEQHKISIYKKISAIQSEEENNKIRSEIYDRFGPIPNELNSLLILSELKLLAQKLNITSLKERNGLLEIEYLD
>SPIRO157_P642614863 YP_001884045 BH0623 transcription-repair coupling factor [Borrelia hermsii DAH]
GHGGFFEAFLINKIKYKIILIVNNENIADALKDDLMQITD--KIYELNYFSPLVYKGIGSKSTIFSERIKFLINFGIYIVLLKSLLSKIPTKENLFKNIYKIQTSKLINIKNLESKLIRLGYEKTMRVTLPGEFTIKGEIIDIHSFNKAEPIRISLHNDTIKEIKYFNPLTQLKKGNEIEFDIIPKKEIIWNNEHARAEEIFYPLIGYLSQEINEDTLEEIQNWLNNGFKVIIAAESSSQKEKLKYIFKDIEVLKISSSLIINKIAIILESDIFNRRTKPIDSFIEVEKNSHVVHINHGIGIFKQIKRIKTSLLEKDYIEIEYADNEKLFIPIEQTHLIQRYIGNENQNIKLDKISSKTWEKKKANAKKRIDAIADQLVSLYSARESTKGFQYPQDNEWQLLFESEFAYDETPDQLTAISEIKQDMMSLKVMDRLLCGDVGFGKTEVAMRAAFKAVMGTKQVAILSPTTILAEQHFNTFKKRFKNFPIKIAMMSRFIKKSKEREIIKNLATGEIDIIIGTHKILSKKIIYKNLGLIIIDEEQRFGVREKEKLKEIKVSVDCLTLSATPIPRSLHMSLIKLRDISVLKTPPQNRIKIETYVEEFSELLIKHAIEHELSRDGQVFFVHHNIQELDLIKAMLEKVVPYARIATIHARLTGDQIENIMHDFINKSYQVLLSTTIIENGIDIENANTIIINNANRFGLAQLYQLRGRVGRSSQKAFAYFLYKESSSLNESAIERLRAISEFSELGAGFQIAMKDMEIRGVGNLLGKEQHGEIESIGLDYYLTMLNKAIEKR-MGDEITIEINYNGFIPDSYVNNEQDKISIYKKISAIQSEEENNKIRAEIHDRFGSIPEELNTLLILSELKLLAKKLNITSLKEKNGLLEIEYLD
>SPIRO157_P642572075 YP_945613 BT0623 transcription-repair coupling factor [Borrelia turicatae 91E135]
GHEGFFKAFLINKIKYKIILIVKNESISDELKDDLMQITD--NIYELNYFSPLIYKDIGSKSKVFIKRVKFLINFGIYIVSLKSLLSKIPTKENLFKNIYKIQTDTIINIENLESKLIKLGYEKTMRVTLPGEFTIKSEIIDIHSFNKTEPIRISVKVDKIKEIKYFNPLTQLKKGTPIEFAIIPKKEIIWNNENARAEEIFYPLIGYLSQEINEDIPEEIQNWLNNGFKVIIAAESNSQKEKLKYIFKDIEILKISSSLIINKIAIILESDIFNRKTKTIDSFIEVEKNSHVVHINHGIGIFRQIKRIKTSLLEKDYIEIEYADNEKLFIPIEQTHLIQRYIGNETQNIKLDKISSKTWEKKKAYAKKRIDAIADKLVELYVQRESSKGFQYPQDNEWQLLFESEFPYDETPDQLTAISEIKQDMMSLKVMDRLLCGDVGFGKTEVAMRAAFKAVMGKKQVAILSPTTILTEQHFNTFKQRFKNFPINIAMMSRFIKKSKERDIIKKLETGEIDIIIGTHKILSKKIIYKNLGLIIIDEEQRFGVKEKEKLKEIKISVDCLALSATPIPRSLHMSLIKLRDISVLKTPPQNRIKIETYVEEFSELLIKHAIENELSRDGQVFFVHHNIQELDLIKAMLEKMVPYARIATIHARLQGDQIENIMHDFINKSYQVLLATTIIENGIDIENANTIIINNANRFGLAQLYQLRGRVGRSSQKAFAYFLYKENSSLNESAIERLRAISEFSELGTGFQIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTMLNKAIEKR-MGDEITIEINYNGFIPDSYINNEQDKISIYKKISKVQNKEENNKIRTEIYDQFGPIPKELNNLLILSELKLLAKKLNITSLKEKNELLEIEYLN
>ACTINO135_YP_909507-NC_008618 mfd transcription-repair coupling factor {Bifidobacterium adolescentis ATCC 15703} [Chromosome ]
GVPDGLRPALAA---GPVVLVVASSREAEETVESIRSWYDPNDVAQLEAWETLPHERLSPRADTVASRMAVFRRLRILVMPVRSLIQPVVA-GLGDVEPLVFSQGEELLLDEASRKLVENAYTRVDLVMDRGEFAVRGGIIDVFPPTLPHPVRIEFFGDEIDTIREFHASDQRTYGKDITVWATPCRELQLTDQPVEGMESLLPALVPVQGMLPKHALSGIEGLLDAGYAVTITAAAQGTLTRLKRAINECVRSHAIDGFVDDAIALLTERDLTGRRRRKAIDLMELKTGDYVVHEQHGIGRFVEMRQRTIGKTTREYLVIEYAPADKLFIPTDQLDQVSKYIG--AETPKLNKLGGSDWAATKAKARKHVHEIAEDLVKLYSARQRTKGYAFSKDTPWQKELEDAFPYQETADQLTTIDEVKSDMEKPIPMDRLICGDVGFGKTEIAVRAAFKAVQDSKQVAVLVPTTLLVQQHFETFTERFEGFPVNVAAMSRFQTAKEINETIKGLEDGSVDVVIGTHKLLNPKIKFKDLGLVIIDEEQRFGVEHKETLKALRTNVDVLSLSATPIPRTLEMAVTGIREMSTLATPPEDRLPVLTYVGAYEDAQVTAAIRRELLRGGQVFYVHNRVQDISSVAAKIHELVPESHVGIAHGKMGEKQLDGVIRDFWHRDIDVLVCTTIIETGLDISNANTLIVDHADRFGLSQLHQLRGRVGRGRERAYAYFLYDPTKPMTQQSHDRLATIAQNTALGSGFDVAMKDLELRGTGNLLGDEQSGHIEGVGFDLYVRMVSEAVEQYK--VAVTIDLPIEASIPVDYIDSDKLRLEAYQKLASARTEDDLDELRDELTDRYGKPPVDFEALFDVARLRFKARKLGISEIIAQGRNVRVKFEP
>ACTINO135_NP_696195-NC_004307 mfd transcription-repair coupling factor {Bifidobacterium longum NCC2705} [Chromosome ]
GIPEGLRPALAAAIGGPVVLVVASGREAEETVGSLRSWYDPNDIAQLEAWETLPHERLSPRADTVASRMAVFRRLRILVMPIRSLIQPVVQ-GLGDVEPLVFTVGEDLPLDEAAKRLIENAYTRVDLVMDRGEFAVRGGILDVFPPTAPHPVRIEFFGDEIDTIKEFHASDQRTYGDGLTIWATACRELQLTDAPVEGMESLMPALVPVGSMLPKHAVQGIEGLLDAGFHVTITAAAAGTLARLRRAINTVIRSQAIDGFVDKAIALLTERDLTGRRRRKAIDLVELKKGDYVVHEQHGIGRFIEMRQRTIGTTTREYLVIEYAPADKLFIPTDQLDQVSKYIG--AEAPKLNKLGGSDWAATKAKARKHVHEIADDLIKLYSARQRARGFAFSPDTPWQKELEDAFPYQETADQLTTIDEVKSDMEKPVPMDRLICGDVGFGKTEIALRAAFKAVQDGKQVAVLVPTTLLVQQHYETFRERFEGFPVNVAAMSRFQTTKEINETIEGLETGTVDVVIGTHKLLNPKIKFKDLGLVIIDEEQRFGVEHKETLKALRTNVDVLSLSATPIPRTLEMAVTGIREMSTLATPPEDRLPVLTYVGAYEDAQVTAAVRRELLRGGQVFYVHNRVQDISSIADKIHTLVPEAHVGIAHGKMGEKQLDQIIRDFWHRGIDVLVCTTIIETGLDISNANTLIVDHADRFGLSQLHQLRGRVGRGRERAYAYFLYDPSKPMTEQSHDRLATIAQNTALGSGFDVAMKDLELRGTGNLLGDEQSGHIEGVGFDLYVRMVSEAVEKYKEPVAVSIDLPIEASIPIEYIDSDKLRLEAYRKLASARNEADLKDLEEELTDRYGKPPVEFETLFDVARLKFKARKLGISEILAQSNRVRIRIDP
>ACTINO135_YP_001223013-NC_009480 mfdA putative transcription-repair coupling factor {Clavibacter michiganensis subsp. michiganensis NCPPB 382} [Chromosome]
SLTEGLQGPLLAGLLRCLLVVTATGRESEGMRRSLDAVLPDAEILEFPAWETLPHERLSPSAEIVGKRIHALRRM-VIVASVRAALQPVAD-NLTELAPVQLATGSRHDLSELAVRLVDLAYSRVDMVTRRGEFAVRGGILDVFPPVSDHPVRVEFFGDEVDQMRPFAVADQRSLEEEISVELPPSRELLLSAPPVEGMESLAPALVPVTHYLPVDAAEHVRQRLADGWSVGVVAQGSGLVERADTVLRELLRSAIDAGFEMPELALLTESEFYGRRRKNVVDPLQLKPGDHVVHTTHGIGRFVELTQREVSGTRREYLVIEYAPGDKLFVPTDQLDLLSRYVG--GEEPALSKMGGSDWAAAKGKARRAVRDIAVELVKLYSARMASRGHSFPPDTPWQRELEEAFPFMETPDQLTVIDEVKRDMESPIPMDRLVSGDVGFGKTEIAVRAAFKAVQDGKQVVMLVPTTLLVKQHFETFSERFAGFPVHLRQLSRFQSEKESRETVKGLEDGSVDVVIGTHRLLTGNIAFKDVGLVIIDEEQRFGVEHKDALKKLKANVDILAMSATPIPRTLEMAVTGIREMSTLATPPEDRHPILTFVGPNSEKQIAAAIRRELLREGQVFFVHNRVSSINRVASELAELVPEARVAVAHGKMSEAMLEQVIVDFWERKFDVLVSTTIIETGLDIANANTLIIDRADKYGLSQLHQLRGRVGRGRERAYAYFLYDADKPLSETAHDRLSTIAANNELGSGMQVALKDLEIRGAGNLLGGEQSGHIQGVGFDLYLRMIGEAVSTFR-GTELRLELPVDAHIPEEYVDSERLRLEAYQKLSTAASDDQIDRVIEELSDRYGEPPVEVDNLVRVSRLRRVAQRAGLSEVVAMGPNLRIAPAA
>ACTINO135_YP_062592-NC_006087 mfd transcription-repair coupling factor {Leifsonia xyli subsp. xyli str. CTCB07} [Chromosome ]
SLTDGLRVPLLAGLLQASLVITATGRESESVRAALPCVLTGAEVVEFPAWETLPHERLSPSPEIVGKRLVALRRL-VLVASVRAALQPIAD-NLTDYDRVELVAGARYDLAGLVAHAVDLAYTRVDMVTRRGEFAVRGGILDVFPPTADHPYRVEFFGDEVEQIRAFSVADQRSLPEPISVGLPPSRELLLSESPVEGMESLAPALAPLTHYLPAGAAEHVAGLLKRGWRVIIVAEGAGLVERAAQVLAELIRATVEHGFELEELALLSEGEFYGRRRKSVVDPLQLKPGDHVVHETHGIGRFVELTQREVSGSKREYLVLEYAPGDKLYVPTDQLDLLTRYVG--GEAPQLSKMGGSDWAAAKGRARRAVRDIAVELVKLYSARMSSKGHSFAPDTPWQRELEEAFPFAETPDQLQTIDEVKADMERPIPMDRLISGDVGFGKTEIAIRAAFKAVQDGKQVAVLVPTTLLVKQHAETFMERFAGFPVHLRQLSRFQTDREARETLRGLAGGTVDIVIGTHRILSDGVTFKDLGLVVIDEEQRFGVEHKDRLKKLKTNVDILAMSATPIPRTLEMAVTGIREMSTLATPPEDRHPILTFVGPYSERQVGAAIRRELLREGQVFFVHNRVGSITSVAAKLAELVPEARIAYAHGKMNEHALEQVVVDFWERKFDVLVSTTIIETGLDISNANTIIIDRADKYGLSQLHQLRGRVGRGRERAYAYFLWDENKPLSETAHDRLSTIAANNDLGSGMQVALKDLEIRGAGNLLGGEQSGHIAGVGFDLYLRMIGEAVSAFR-GTELRLELPVDARIPEEYVDSERLRLEAYQKLSAATADGQIDLVLEELTDRYGEPPAPVLNLVAVSRLRRTAQRSGLGEVVAMGSQLRLAPAP
>ACTINO135_YP_251281-NC_007164 mfd transcription-repair coupling factor {Corynebacterium jeikeium K411} [Chromosome ]
QAPEGAWPFAVGTLA-PLLVVTATGRQAQDLTTVLRYMLG-DRVELFPSWETLPHEKLSPAVETVSTRMRVLRRLQVVVAPTRAAVQPVQS-NLGEVTPVRLKVGEEIDFDSLTHRLQELGYTHVDVVGKRGHFAIRGGIVDIFPATEEMPVRVDFWGDEITEVRAFSVGDQRTIPVEPQVMVYACRELIVTDEQVQGMESLIPALHALPELMPEGTHSDIRKRVESGGRVAFAAPTPAVAARMLRRFQEIYHAVAYEGLVFP-LLFFTETDLTGNKKRNRVDPLALEPGDLVVHDSHGIGKFVKMTERTVGKSRREYLVLEYAPGDQLYVPMDQLDMLSRYVG--GEKPALSKMGGADWKNTKRKARGAVREIAGELVQLYASRQAAPGYAFAADTPWQREMEDAFPFTETEDQYNAIEAVKADMEKPVPMDRVIVGDVGYGKTEVAVRAAFKAVQSGKQVAVLVPTTLLAQQHYNTFSERMQDFPTTIKELSRFTTPAESKKVIAGMADGTVDIVIGTHRLLQTGVHWKNLGLIIVDEEQRFGVEHKEHIKSLRTHVDVLTMSATPIPRTLEMSMAGIREMSTILTPPEDRHPVLTYVGAQEDKHVAAAIRRELLRDGQVFYVHNKVRSIEQTAADIRRLVPEARVVVAHGQMSEEQLETTVKGFWDREFDVLVCTTIVETGLDIANANTLIVENAHHMGLSQLHQLRGRVGRSRERGYAYFLYPKGEVLTETSYDRLTTIAQNNDLGAGMAVAMKDLEMRGAGNVLGAEQSGHIAGVGFDLYVRLVGEAVEAFRDGKEIRIDLPVDAHIPAEYIASERLRLEAYRKFAEVQDEEQIEKVLEELRDRYGKPPEQIQMLAVLSRLRLLCRDLQVTEVV--TTGSKISFSP
>ACTINO135_NP_939274-NC_002935 mfd transcription-repair coupling factor {Corynebacterium diphtheriae NCTC 13129} [Chromosome ]
TGIDQARPWAIAALA-PVLVVTATGREAEDLSAELRAMLG-EKVAWFPAWETLPHERLSPGADIAGQRARILSHISVVVTAARGFSQPIVS-QVAGRDPLVLEVDSECSLEEATQQLVFRAYHHVDLVAKRGEFATRGGILDVFPTTAQHPVRVEFWGDEVSEIRGFQVADQRAIPSDVRVEVFPARELPITPEPSDGMEALIPALVTLAELMPENTHALLLAHTRDGGAAAFIAPAQGAIKRMVERFKELYQAMSHAGLVFPKLVVITKTDLTGNKRRHRVDPLALKTGDYVVHETHGIGRFLKMTERVIQSSRREYIVLEYAAADQLYVPMDSLDMLSKYVG--GEKPTLSKMGGSDWKNTKKKARAAVREIAGELVELYAKRQSAPGHAFAPDSPWQHEMEDNFPYVETEDQMLAIDAVKADMEKPSPMDRVVVGDVGYGKTEVAVRAAFKAVQDGRQVVVLVPTTLLAQQHLSTFEERMAGFPVTIKGLSRFTSPSESKEILKGLADGSVDIVIGTHRLLQTGVQWKNLGLVIVDEEQRFGVEHKEHIKALRTHVDVLTMSATPIPRTLEMSMAGIREMSTILTPPEDRHPILTYVGAQEDKQVAAAIRRELLRDGQVFYVHNKVSDIEKKARELRELVPEARIVVAHGQMSEELLEQTVQGFWDREYDVLVCTTIVETGLDIANANTLIVENAHHMGLSQLHQLRGRVGRSRERGYAYFLYPKGATLTENSYDRLATIAQNNDLGAGMAVAMKDLEMRGAGNVLGAQQSGHIAGVGFDLYVRLVGEAVEAYRDGKEIRIDLPVDAHIPEDYINSERLRLEVYRKLAASANDKDLALVVEEMKDRFGPVPHEVKRLLAVSRLRHLARATGLS--DIGVQGTRIKLHP
>ACTINO135_NP_737644-NC_004369 putative transcription-repair coupling factor {Corynebacterium efficiens YS-314} [Chromosome ]
TGVDQARPWVIGTLA-PVLVVTATGREAEDLTAELRAMM-GDKVAWFPSWETLPHERLSPGVDIVGRRAQVLNKLKIIVTAARAFCQPVLK-EAAGRQPLILREGAEADFSALGEELVFRAYKNVDMVAKRGEFATRGGILDVFPTTLDYPVRIEFWGDEVSDIRQFSVADQRTIETLDEIEIYPARELLITDEDVDGMEALIPALVPLLELMPENTHALLLAHTKAGGRAAFIAPSEGAIRRMVERFAELYHALSHAGLVFPKLVVITETDLTGNRRRNKVDPLALTPGDLVVHETHGIGRFIKMTERTISGSRREYIVLEYAPGDQLYVPMDSLDMLSRYVG--GEKPTLSKMGGSDWKNTKKKARAAVREIAGELVELYAKRQAAPGHAFGPDTPWQKEMEDNFPYVETEDQMLAIDAVKEDMEKPVPMDRVIVGDVGYGKTEVAVRAAFKAVQDGKQVAVLVPTTLLAQQHKSTFEERMAGFPVTIHGLSRFTSTAESKETLAGLASGEVDIVVGTHRLLQTGVQWKNLGLVIVDEEQRFGVEHKEHIKALRSHVDVLTMSATPIPRTLEMSMAGIREMTTMLTPPEDRHPILTYVGPYEDKQVAASIRRELLRDGQVFFIHNKVADIEKKARELRDLVPEARVVVAHGQMSEELLEQTVQGFWDREYDVLVCTTIVETGLDIANANTLIVENAHHMGLSQLHQLRGRVGRSRERGYAYFLYPKGATLTETSYDRLATIAQNNDLGAGMAVAMKDLEMRGAGNVLGAEQSGHIAGVGFDLYVRLVGEAVEAYRDGTEVRVDLPVDAHIPENYINSERLRLEIYRKLATSESESDLQLAVEEMEDRYGPIPEEVSRLLAVARLRHQMRAAGLTDVAVQGTRIHPELKD
>ACTINO135_NP_600190-NC_003450 transcription-repair coupling factor - superfamily II helicase {Corynebacterium glutamicum ATCC 13032} [Chromosome ]
TGIDQARPWAIGALA-PVLVVTATGREAEDLTAELKAMM-GDKVAWLPSWETLPHERLSPGVDIVGKRAQVLNHLKVVVAAARAFCQPVLK-DAEGRAPLTLKEGAEFDFSALTTELVFRAYKHVDMVAKRGEFATRGGILDIFPTTLDYPVRVEFWGDEVSDIRQFSVADQRTIETIKSIEIFPARELLITEEDVDGMEALIPALTPMLELMPENTHAQLLAHTTGGGRAAFIAPTQGAIKRMVDRFAELYHALSHAGLVFPKLVVITETDLTGNKRRNKVDPLALEPGDLVVHETHGIGRFVKMTERTISGSRREYIVLEYAPGDQLYVPMDALDMLSRYVG--GEKPTLSKMGGSDWKNAKKKARAAVREIAGELVELYAKRQSAPGHPFAPDTPWQKEMEDNFPYVETEDQMLAIDAVKEDMEKSVPMDRVIIGDVGYGKTEVAVRAAFKAVQDGKQVAVLVPTTLLAQQHQSTFEERMTGFPVTIKGLSRFTSPAESREILSGLAAGSVDIVIGTHRLLQTGVQWKNLGLVIVDEEQRFGVEHKEHIKALRTHVDVLTMSATPIPRTLEMSMAGIREMTTMLTPPEDRHPILTYVGPYEDKQVAASIRRELLRDGQVFFIHNKVADIEKKAREIRDLVPEARVVVAHGQMSEELLEQTVQGFWDREYDVLVCTTIVETGLDISNANTLIVENAHHMGLSQLHQLRGRVGRSRERGYAYFLYPKGATLTEMSYDRLATIAQNNDLGAGMAVAMKDLEMRGAGNVLGAEQSGHIAGVGFDLYVRLVGEAVEAYRDGKEIRVDLPVDAHIPEKYINAERLRLEIYRKLAQSESEVDLRLAVEEMEDRYGPIPEEVERLLAVSRLRHLMREAHLTDIAVQGTRHPVDLAD
>ACTINO135_YP_001137938-NC_009342 hypothetical protein {Corynebacterium glutamicum R} [Chromosome]
TGIDQARPWAIGALA-PVLVVTATGREAEDLTAELKAMM-GDKVAWLPSWETLPHERLSPGVDIVGKRAQVLNHLKVVVAAARAFCQPVLK-DAEGRAPLTLKEGAEFDFSALTTELVFRAYKHVDMVAKRGEFATRGGILDIFPTTLDYPVRVEFWGDEVSDIRQFSVADQRTIETIKSIEIFPARELLITEEDVDGMEALIPALTPMLELMPENTHAQLLAHTTGGGRAAFIAPTQGAIKRMVDRFAELYHALSHAGLVFPKLVVITETDLTGNKRRNKVDPLALEPGDLVVHETHGIGRFVKMTERTISGSRREYIVLEYAPGDQLYVPMDALDMLSRYVG--GEKPTLSKMGGSDWKNAKKKARAAVREIAGELVELYAKRQSAPGHPFAPDTPWQKEMEDNFPYVETEDQMLAIDAVKEDMEKSVPMDRVIIGDVGYGKTEVAVRAAFKAVQDGKQVAVLVPTTLLAQQHQSTFEERMTGFPVTIKGLSRFTSPAESREILSGLAAGSVDIVIGTHRLLQTGVQWKNLGLVIVDEEQRFGVEHKEHIKALRTHVDVLTMSATPIPRTLEMSMAGIREMTTMLTPPEDRHPILTYVGPYEDKQVAASIRRELLRDGQVFFIHNKVADIEKKAREIRDLVPEARVVVAHGQMSEELLEQTVQGFWDREYDVLVCTTIVETGLDISNANTLIVENAHHMGLSQLHQLRGRVGRSRERGYAYFLYPKGATLTEMSYDRLATIAQNNDLGAGMAVAMKDLEMRGAGNVLGAEQSGHIAGVGFDLYVRLVGEAVEAYRDGKEIRVDLPVDAHIPEKYINAERLRLEIYRKLAQSESEVDLRLAVEEMEDRYGPIPEEVERLLAVSRLRHLMREAHLTDIAVQGTRHPVDLAD
>ACTINO135_YP_055252-NC_006085 transcription-repair coupling factor {Propionibacterium acnes KPA171202} [Chromosome ]
QVAASARPAVAAVLGGPVLLVTSTFREAEESVATLKTWLGADAVCYYPSWETLPHERLSPRTDTVGRRMEVLRRLQVVVAPVRSLLQPQVA-GLGRVAPVRLAVGEEHDLTELATELVNAAYSRVDMVERRGEFAVRGGIVDVFPPVLEHPVRIDFFGDEIEEMTSFAVADQRSTDETHELICAPCRELILTDEAVEGMEALMPALVLLVDVLPEHAMKDLTARLDDGWTVLLCAEGEGMAKRMSELLGEVIRLHQRHGFAAESLLVASTGDLAESRRRNQIQPLELKPGDLIVHEQHGVGRYVEMVQRTVGGATREYLVIEYAPGDRLFVPVNSLDQVTRYVG--GDAPSLDRMGGGDWRKRKARARKAVREIAAELIKLYAARQATKGHAFGPDTAWQRELEGAFAYVETPDQLTTIADVKRDMEQVVPMDRLVCGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHFQTFTERYAGFPVKVAALSRFQTDTEARETLEGLQRGTVDVVVGTHRLLAKEVEFKDLGLVIVDEEQRFGVEHKEALKRMRVNVDVLAMSATPIPRTLEMAVTGIREMSTIATPPEERHPVLTFAGPYDEGQVVAAIRRELAREGQVFYIHNRVQSIEKTAAKLRELVPEARIVTAHGQMNEKQLEQIMVDFWERRADVLVCTTIVESGIDISTANTLLIDRADLMGLSQLHQLRGRVGRSRERGYAYFLYPADKPLSQTAHDRLATMAAHTDLGSGMAIAMKDLEIRGAGNLLGGEQSGHIADVGFDLYIRLVGDAVAEFRGDPEMRIELPVDANLPVEYVETERLRLEMYKRLAEVRSDEEVDAIGAELVDRYGPMPEPVQALLGVARFRLLCRQAGIHEVV--PAGRNIRFSP
>ACTINO135_GEBA2500890730 Bfae_13430 transcription-repair coupling factor (mfd) [Brachybacterium faecium 6-10, DSM 4810]
VAATGLFPFLVADLAAPLVIVTATTRATEDLRAALSALVGTEHLVELPAWETLPHERLSPRADTVAKRLSTLRRIHVVLMPVRSLLQPIAK-GLGELRPVRAAVGDTYPLEDLERDLTGAAYARVDMVEKRGEFAVRGGILDVFPPTEPHPVRVDLFGDEIDDVRYFSVADQRSLDPAPGLDAPPCREILLTPAAADGMESLSPVLVQVADVLPAGARKDLERRRAEGWSVLSTMVGPGGARHVAENLRAVTVGPFAEGLVDEDLILAAERDLTGKRRRNVVDPLQLRPGDHVVHAHHGVGRFVEMTRRAVGSTTREYLVIEYAPGDRLYVPSDQLDQVTKYVG--GEEPSVNRMGGADWAKTKSKARKAIREIADELVRLYSARQSAPGHAFGPDTPWQRELEDSFEFVETPDQLVTIDDVKADMEKSVPMDRLILGDVGYGKTEIAVRAAFKAVQDGKQVAVLAPTTLLAQQHLDTFAERYTGFPVTVRGLSRFQNPADSEATVEGLRDGSVDIVIGTHRLLTGNVRFKDLGLLIVDEEQRFGVEHKETLKALRTNVDVLSMSATPIPRTLEMAVTGIRELSILATPPEERHPVLTYVGAQEDKQVTAAIRRELLREGQVFYIHNRVEDIDRVAAHLRELVPDARVQVAHGKMNEHQLERVLIDFWERDFDVLVCTTIVETGLDISNANTLIVENADRFGLSQLHQLRGRVGRSSERAYAYFLYNATKPLTELAHDRLTTLATNTDLGAGMQVAMKDLEIRGAGNLLGGEQSGHIAGVGFDLYVRMVGEAVAAFRGEKEIRVELPLDAHVPHDYIGSERLRLEAYSKLSAVREVSEIAQIRAELTDRYGTPPAPVEVLLDVARFRIDARTAGIDEVQ--AQGKMIRFAH
>ACTINO135_YP_873671-NC_008578 transcription-repair coupling factor {Acidothermus cellulolyticus 11B} [Chromosome ]
GVPRPLRAFITALIAYPVLAVTATEREATELATALEPLLPAGAVAEYPAWETLPHERLSPRADTVGRRVAVRRLLRVITTPVRALLQPQVA-GLGDLEPVELRPGDEADLNDVVARLVAIGYHRVDLVERRGEIAVRGGILDIFPPTAEHPLRVEFFGDRIEEIRPFRAGDQRSFGESARVWATACRELLLTDRVVEGMEALAPLLALLLDEVPSQTVADVKGWLGDGLRVAVLTAGHGSAQRIVEVLAGVSCGGLDAGFIARGLVVLTETEIFGTRRRKSIDPLELRPGDFVVHEQHGVGRFVGMATREIGGATREYLVIEYAPGDRLWVPTDSLDQVTRYVG--GEAPTLDRIGGADWARRKGRARKAVREIAAELIQLYSARMASPGHAFGPDTPWQRELEEAFPYVETPDQLRTIEEVKADMERPVPMDRLICGDVGYGKTEIAVRAAFKAVQDGKQVAVLCPTTLLVQQHYATFSERFANFPVVVKPVSRFNTFKEQEEILAGLAAGTVDVVIGTHRLLSDGVVFKDLGLVIVDEEQRFGVEHKERLKRLRTNVDVLTMSATPIPRTLEMAITGIREMSVIQTPPEERHPVLTFVGPFDEHQIAAAIRRELLREGQVFYVHNRVETIEQAAARVRELVPEARVAVAHGQMNEDALEQVMIGFWERAFDVLVCTTIIESGLDIPNANTLIVERADLLGLGQLYQLRGRVGRGRERGYAYFCYPADRPLTETAHDRLATIAQHSDLGSGMSIAMKDLEIRGAGNLLGGEQSGHIAEVGFDLYMRLVGEAVADFRGDVDVRLDLPVEAHIPHDYIDAERLRLATYQALAEATSDPDVDAIAEELLDRYGPLPEPVRNLLEVAKLRGTLRAHGVTEVA--LQGTYIRLAP
>ACTINO135_GEBA2500938476 Svir_32300 transcription-repair coupling factor (mfd) [Saccharomonospora viridis P101, DSM 43017]
DGSTATHQLVVAALARPVLAVTPTGRQAEELTAALRSLLGENLVADFPSWETLPHERLSPRADTVGKRLEVLRRLRVVVATVRSLIQPMAP-GLGGLHPVELRVGQESDFEAVLDQLVELAYTRVDMVEKRGEFAVRGGILDIFGPTAEHPHRIEFWGDEVSEIRAFAVSDQRSLPEVTEVIAPPCREILLTPDPCEGMEALIPVLCLLTDALPEGTHTDLRAHTASGGAAVVVVAGAGTAKRAVDQLSGVTCGGISDGFVAPGLVVLSEADITGARRRNAVDPLALKSGDYVVHDQHGIGRFVEMVRRTVGGATREYLVIEYAPGDRLFVPTDQLDEVSRYVG--GETPTLNKMGGADWKKTKARARKAVKEIAAELVQLYAARQAAPGHAFSPDTPWQRELEDAFPFTETADQLAAIDEVKRDMERDVPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVVVLVPTTILAQQHLATFSERMRSFPVTIKGLSRFTDPHEAEQVINGLADGEVDIVIGTHRLLQSNVRYKDLGLVIVDEEQRFGVEHKEHIKALRTHVDVLTMSATPIPRTLEMSMAGIREMSTILTPPEDRHPILTYVGAYDDKQVAAAIRRELLRDGQVFYVHNRVSSIERAARRLRELVPEARVVTAHGQMNEHRLEQIIQGFWEREYDVLVCTTIVETGLDISNANTLIVEHADQLGLAQLHQLRGRVGRGRERGYAYFLYPADKPLTETAHDRLATIAQNTELGAGMAVAMKDLEIRGAGNILGAEQSGHIAGVGFDLYVRLVGEAVEAFRP-TEVRVDLPVDAHIPHDYVPGERLRLEAYRKIAAAPDAEGLDAVREELVDRYGKLPAPVERLLAVAAFRQVCREAGVTEVTQGNN-IRFTP-L
>ACTINO135_GEBA2501595717 Amir_0665 transcription-repair coupling factor [Actinosynnema mirum 101, DSM 43827]
EGPPAARPLVAAALS-PVLAVTATGREAEELASVLRDLVGPEAVAIFPSWETLPHERLSPRADTVGARLQVLRRLRAVVATVRSLIQPMAP-GLGDLEPLDLATGSEHDFDALLHRLAELAYTRVDMVEKRGEFAVRGGILDVFPPTAEHPLRVEFWGDEVTEIRPFSVADQRSLPQVDAFTAPPCRELLLTERPSEGMEALIPALCLLTDLVPDGTHADLRAHTAAGGTAVLVVPGTGTAQRATEQLREVVRGALEDGFALPELVVLTETDLTGGRRRNAVDPLALRTGDYVVHEQHGIGRYVEMVQRTVAGATREYLVLEYASGDRLFVPTDQLDEVSRYVG--GELPTLNKLGGSDWKNTKAKAKKAVKQIAAELVQLYAARQSAPGHAFAPDTPWQRELEDAFPFTETVDQMAAIDEVKADMERGVPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVVVLVPTTLLAQQHLNTFTERMRAFPVVVRGLSRFTDPTEAEQTTTGLAEGDVDVVIGTHRLLQKGLRYKDLGLVIVDEEQRFGVEHKEHIKALRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERHPILTYVGGYADKQVGAAIRRELLRDGQVFYVHNRVSSIEKAARRIRELAPEARVVTAHGQMNEDKLEKIIQGFWEREYDVLVSTTIVETGLDISNANTLIVERGDLLGLSQLHQLRGRVGRGRERGYAYFLYPPESPLSETAHDRLATIAQNTELGAGMAVAMKDLEIRGAGNILGAEQSGHIAGVGFDLYVRLVGEAVEAFRAGAEVRVELPVDAHIPHDYVPGERLRLEAYRKIAAAVDEAGLTAVRDELKDRYGAPPLPVERLLDVARLRHTCRAHGVTEVA--LQGSSIRFAP
>ACTINO135_YP_001103092-NC_009142 mfd transcription-repair coupling factor {Saccharopolyspora erythraea NRRL 2338} [Chromosome ]
EGPAAARPLAAAALA-PVLLVTATGREAEEVAAAVSDLIGSDGVEVFPSWETLPHERLSPRADTVGRRLAVLRRLRVLVTTVRSLIQPIAP-GLGELAPVRLRVGDEHDFEELVEKLAALAYNRVDMVEKRGEFAVRGGIVDVFPPTEEHPLRVEFWGDEVTEVRPFSVADQRSLPAQDTLFAPACRELLITEQPVEGMEALIPALCLLTDLVPGGTHADLRAHTTAGGAAVLVVAGAGTAQRAVQQLREVARGGLEDGFAAPELVVLTEADLTGGRRRNAVDPLALKAGDFVVHEQHGIGKYVEMVQRTVGGATREYLVLEYASGDRLFVPTDQLDEVSRYVG--GELPTLNKLGGSDWKNTKAKARKAVKEIAAELVQLYAARQSAPGHAFGADTPWQRELEDAFPYTETGDQLAAIDEVKADMQRAVPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLAQQHLNTFTDRMRSFPVTVKGLSRFTDPLESEQTTTGLAEGTVDVVIGTHRLLQTGVRYKDLGLVIVDEEQRFGVEHKEHIKALRTHVDVLTMSATPIPRTLEMSMAGIREMSTILTPPEERHPVLTYVGAYDEKQVAAAIRRELLRDGQVFFVHNRVQTIEKAARHLRELVPEARIVTAHGQMNEDRLEKIIQGFWEREHDVLVCTTIVETGLDISNANTLIVERSDVLGLSQLHQLRGRVGRARERGYAYFLYPEEKPLTDTAHDRLATIAQNSELGAGMAVAMKDLEIRGAGNILGAEQSGHIAGVGFDLYVRLVGEAVEAFRGGPEVRVDLPVDAHIPHDYVPGERLRLEAYRKIAAAGDTEALDAVRAELTDRYGSLPEPVERLLKVAAFRQLCRAHGVTEVTQQGTSAPLELA-
>ACTINO135_YP_001133216-NC_009338 transcription-repair coupling factor {Mycobacterium gilvum PYR-GCK} [Chromosome]
VGPASARLFVASALA-LLLVVTATGREADDLTAELRGVFG-DAVAMFPSWETLPHERLSPGVDTVGARMMLLRRLRVVVTTARSLLQPMAP-DLARIDPVTLTVGGEADFDETVARLVDLAYTRVDMVGKRGEFAVRGGILDLFPPTAEHPVRVEFWGDEISEMRMFSVADQRSIPIEITVIAVPCRELLLTADPVDGMEALLPLLRTLPDHLPEGTPAMLRAHVATGGCGVVVTPGAGTCQRVVEQLSEVLKGPLHDGVVIPGLVVITETDLTGNKRRNVVDPLALTAGDLVVHDQHGIGRFVEMTERVIGGARREYLVLEYASADRLYVPMDSLDQLSRYVG--GEAPTLSRLGGSDWANTKTKARRAVREIAAELVTLYAKRQASPGHAFSPDTPWQVEMEDAFGFTETVDQLTAITEVKSDMEKPVPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFTARMTGFPVTVRGLSRFTDPASSRATLEGMKDGSVDIVIGTHRLIQTGVTWKDLGLVIVDEEQRFGVEHKEHIKSMRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGQHDDKQVAAALRREMLRDGQAFYIHNRVRTIDSAAAKIRQLVPEARVVVAHGQMPEEQLEKTVEGFWNREYDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPEVPLTETAYDRLATIAQNNELGAGMAVAMKDLEIRGAGNVLGAEQSGHVAGVGFDLYVRLVGEAVEAYRAAKDVRIDLPVDAHLPPDYIGSDRLRLEGYRRLAAAPDDAAVDAVVEELVDRYGPLPEPAELLVAVARLRLLARAAGITEVGVSASASTLRISP
>ACTINO135_YP_955556-NC_008726 transcription-repair coupling factor {Mycobacterium vanbaalenii PYR-1} [Chromosome ]
VGPASARVFVASALA-LLLVVTATGREADDLTAELRGVFG-DAVALFPSWETLPHERLSPGVDTVGARMMLLRRLRIVVTTARSLLQPMAP-DLAEVDPVTLTVGGEADFDAVVARLVDLAYSRVDMVGKRGEFAVRGGILDVFPPTAEHPVRVEFWGDEVSEMRMFSVADQRSIPIEITLIAVPCRELLLTAEPVDGMEALLPLLRTLPDHLPEGTPAMLRAHVATGGFGVVVTPGSGTAMRVVEQLSEVIKGPLHDGVVIPGLVVITETDLTGNKRRNVVDPLALTAGDLVVHDQHGIGRFVEMTERVIGGARREYLVLEYASSDRLYVPMDSLDQLSRYVG--GEAPTLSRLGGSDWANTKTKARKAVREIAAELVALYAKRQASAGHAFAPDTPWQREMEDAFGFTETVDQLTAITEVKSDMEKPVPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFTNRMTGFPVTVKGLSRFTDPAESRATIEGMKDGSVDIVIGTHRLLQTGVTWKDLGLVIVDEEQRFGVEHKEHIKSMRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDKQVAAALRREMLRDGQAFYIHNRVRTIDSAAAKVRQLVPEARVVVAHGQMPEEQLEKTVEGFWNREYDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPEVPLTETAYDRLATIAQNNELGAGMAVAMKDLEIRGAGNVLGAEQSGHVAGVGFDLYVRLVGEAVEAYRAAKDVRIDLPVDAHLPPDYIGSDRLRLEAYRRLAAAPDDAAVDAVIEELVDRYGPLPEPAQRLVAVARLRLLARAHGVTEIGAPSA-TTLRISP
>ACTINO135_YP_889663-NC_008596 mfd transcription-repair coupling factor {Mycobacterium smegmatis str. MC2 155} [Chromosome ]
VGPASARVLVAAALA-PLLVVAATGREADELTAELRGVFG-DSVALFPSWETLPHERLSPGVETVGARLMLLRRLRVVVTTTRSLLQPMAP-DLVDIEPVTLSVGAEMEFEDVVARLVDLSYTRVDMVGKRGEFAVRGGILDVFPPTAEHPVRVEFWGDEISEMRAFAIADQRSIPVPVTVVAVPCRELLMTDDPVDGMEALLPLLHTLTRHLPEGAPAMLRAHVATGGYAAVVTPGIGTAHRVVEQLGEVLKGPLCSGVVLPGLVIITETDLTGNKRRNVVDPLALTAGDLVVHDQHGIGKFVEMTERVVGGARREYLVLEYASTDKLYVPMDSLDQLSRYVG--GEAPSLSRLGGSDWANTKTKARRAVREIASELVALYAKRQSAPGHAFGPDTPWQAEMEDAFGFTETIDQLTAIQEVKSDMEKPVPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFTNRMAGFPVTVKGLSRFTDPAESRAVIEGLKDGSVDVVIGTHRLLQTGVTWKDLGLIIVDEEQRFGVEHKEHIKSMRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDKQVAAALRRELLRDGQAFYIHNRVRTIDEAAARVRQLVPEARVVVAHGQMNEETLEKTVEGFWNREYDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPNKPLTETAYDRLATIAQNNELGAGMAVAMKDLEIRGAGNVLGAEQSGHVAGVGFDLYVRLVGEAVEAYRAAKDVRIDLPVDAHLPPEYIGSDRLRLEAYRRLAAAADDDAVASVVDELIDRYGPLPEPAQRLVAVARLRLLCREFGITEIGAVSA-STVRLSP
>ACTINO135_YP_001072880-NC_009077 transcription-repair coupling factor {Mycobacterium sp. JLS} [Chromosome ]
VGPASARLLVTAALA-PLLVVTATGREADDLTAELRGVIG-DSAALFPSWETLPHERLSPGVDTVGARMMLLRRLRVVVTTARSLVQPMAP-GLAEVEPVTLTVGAEMDFDGVIKRLVDLAYTRCDMVAKRGEFAVRGGILDVFPPTAEHPVRVEFWGDEISEMRMFAVADQRSIPIEVTVIAVPCRELLMSDEPVDGMEALLPLLRMLSDHLPDGAPAMLRAHVATGGYGAVVTPGAGTAHRVVEQLGEVLKGPLHDGVVLPGLVIVTEADLTGSKRRNVVDPLALTAGDLVVHDQHGIGRFVEMTERVVGGARREYLVLEYASSDRLYVPMDSLDQLSRYVG--GEAPSLSKLGGSDWANTKTKARRAVREIASELVALYAKRQAAPGHAFSPDTPWQNEMEDAFGFTETVDQLTAIEEVKADMEKPVPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFTARMAGFPVTVKGLSRFTDPAESRAALEGMKDGSVDIVIGTHRLLQTGVVWKDLGLIIVDEEQRFGVEHKEHIKSMRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPQDDKQVAAALRRELLRDGQAFYIHNRVRTIDQAASKIAALVPEARVVVAHGQMPEELLERTVEGFWNREYDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPEQPLTETAYDRLATIAQNNELGAGMAVAMKDLEIRGAGNVLGAEQSGHVAGVGFDLYVRLVGEAVEAYRAAKDVRIDLPVDANLPPDYIGSDRLRLEAYRRLAAAQDDAGVDAVIDELVDRYGPLPEPAQRLVGVARLRLVCREYGITDVSSVSA-STVKLSP
>ACTINO135_YP_940312-NC_008705 transcription-repair coupling factor {Mycobacterium sp. KMS} [Chromosome ]
VGPASARLLVTAALA-PLLVVTATGREADDLTAELRGVIG-DSAALFPSWETLPHERLSPGVDTVGARMMLLRRLRVVVTTARSLVQPMAP-GLAEVEPVTLTVGAEMDFDGVIKRLVDLAYTRCDMVAKRGEFAVRGGILDVFPPTAEHPVRVEFWGDEISEMRMFAVADQRSIPIEVTVIAVPCRELLMSDEPVDGMEALLPLLRMLSDHLPDGAPAMLRAHVATGGYGAVVTPGAGTAHRVVEQLGEVLKGPLHDGVVLPGLVIVTEADLTGSKRRNVVDPLALTAGDLVVHDQHGIGRFVEMTERVVGGARREYLVLEYASSDRLYVPMDSLDQLSRYVG--GEAPSLSKLGGSDWANTKTKARRAVREIASELVALYAKRQAAPGHAFSPDTPWQNEMEDAFGFTETVDQLTAIEEVKADMEKPVPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFTARMAGFPVTVKGLSRFTDPAESRAALEGMKDGSVDIVIGTHRLLQTGVVWKDLGLIIVDEEQRFGVEHKEHIKSMRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPQDDKQVAAALRRELLRDGQAFYIHNRVRTIDQAASKIAALVPEARVVVAHGQMPEELLERTVEGFWNREYDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPEQPLTETAYDRLATIAQNNELGAGMAVAMKDLEIRGAGNVLGAEQSGHVAGVGFDLYVRLVGEAVEAYRAAKDVRIDLPVDANLPPDYIGSDRLRLEAYRRLAAAQDDAGVDAVIDELVDRYGPLPEPAQRLVGVARLRLVCREYGITDVSSVSA-STVKLSP
>ACTINO135_YP_641406-NC_008146 transcription-repair coupling factor {Mycobacterium sp. MCS} [Chromosome ]
VGPASARLLVTAALA-PLLVVTATGREADDLTAELRGVIG-DSAALFPSWETLPHERLSPGVDTVGARMMLLRRLRVVVTTARSLVQPMAP-GLAEVEPVTLTVGAEMDFDGVIKRLVDLAYTRCDMVAKRGEFAVRGGILDVFPPTAEHPVRVEFWGDEISEMRMFAVADQRSIPIEVTVIAVPCRELLMSDEPVDGMEALLPLLRMLSDHLPDGAPAMLRAHVATGGYGAVVTPGAGTAHRVVEQLGEVLKGPLHDGVVLPGLVIVTEADLTGSKRRNVVDPLALTAGDLVVHDQHGIGRFVEMTERVVGGARREYLVLEYASSDRLYVPMDSLDQLSRYVG--GEAPSLSKLGGSDWANTKTKARRAVREIASELVALYAKRQAAPGHAFSPDTPWQNEMEDAFGFTETVDQLTAIEEVKADMEKPVPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFTARMAGFPVTVKGLSRFTDPAESRAALEGMKDGSVDIVIGTHRLLQTGVVWKDLGLIIVDEEQRFGVEHKEHIKSMRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPQDDKQVAAALRRELLRDGQAFYIHNRVRTIDQAASKIAALVPEARVVVAHGQMPEELLERTVEGFWNREYDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPEQPLTETAYDRLATIAQNNELGAGMAVAMKDLEIRGAGNVLGAEQSGHVAGVGFDLYVRLVGEAVEAYRAAKDVRIDLPVDANLPPDYIGSDRLRLEAYRRLAAAQDDAGVDAVIDELVDRYGPLPEPAQRLVGVARLRLVCREYGITDVSSVSA-STVKLSP
>ACTINO135_NP_301309-NC_002677 mfd putative transcription-repair coupling factor {Mycobacterium leprae TN} [Chromosome ]
AGPACARLFVASALA-PLLVVTATGREASNLTAELRGVFG-AAVAMFPSWETLPHERLSPGVDTVGARLMVLRRLQVVVTAVRSLLQPMTA-QLGLVEPVTLSVGDEIGFERVIARLVELAYTRVDMVGRRGEFAVRGGILDIFGPTAEHPVRVEFWGDEITEMRMFSVVDQRSIPIGVTLVAIACRELLLSDDPVDGMEALLPVLCLLTDQFAADTPAMLRAHVATGGYAAIVTPGTGTAHRVVERLAEVLKGPLLDGVVIPGLVIITEADLTGSKRRSAADPLALTAGDLVVHDQHGIGRFVEMVERTVGGARREYLVLEYASADKLYVPMDSLDQLSRYVG--GQAPALSRLGGSDWANTKTKARCAVREIAGELVSLYAKRQASPGHAFGPDTPWQAEMEDAFGFTETVDQLTAITEVKGDMEKSVPMDRVICGDVGYGKAEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLRTFTERMAGFPVTVKGLSRFTDAAESRAVIDGLAEGSVDIVIGTHRLLQTGVCWKDLGLVVVDEEQWFGVEHKEHIKSLRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDKQVAAALRRELLRDGQAFYVHNRVSSIYQAAARVCGLVPEARVVVAHGQMPEDLLETTMRGFWNREYDILVCTTIVETGLDIPNANTLVVERADTFGLSQLHQLRGRVGRSHERGYAYFLYPPQAPLTEIAYDRLVTIAQNNELGAGMAVALKDLEIRGAGNVLGVEQSGHVAGVGFDLYVRLVGEAVEAYRAVKDVRIDLPVDAHLPPDYIASDRLRLEGYRRLAAASSDTEVAAVVDELIDRYGALPEPAQRLVAVAQLRLLCRGSGIIEVT-APSASTMRLSP
>ACTINO135_NP_854704-NC_002945 mfd PROBABLE TRANSCRIPTION-REPAIR COUPLING FACTOR MFD (TRCF) {Mycobacterium bovis AF2122/97} [Chromosome ]
IAPASARLLVASALA-PLLVVTATGREADDLAAELRGVFG-DAVALLPSWETLPHERLSPGVDTVGTRLMALRRLGVVVTSVRSLLQPMTP-QLGMMEPLTLTVGDESPFDGVVARLVELAYTRVDMVGRRGEFAVRGGILDIFAPTAEHPVRVEFWGDEITEMRMFSVADQRSIPIDITLVAFACRELLLSEDAVDGMEAVLPVLWLLTDQLPDGTPAMLRAHIATGGYAALVAPGTGTAHRVVERLSEVLQGPLRDGVIIPGLVVITETDLTGSKRRNIVDPLALTAGDLVVHDQHGIGRFVEMVERTVGGARREYLVLEYASTDKLYVPMDSLDQLSRYVG--GQAPALSRLGGSDWANTKTKARRAVREIAGELVSLYAKRQASPGHAFSPDTPWQAELEDAFGFTETVDQLTAIEEVKADMEKPIPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFGERMSGFPVTIKGLSRFTDAAESRAVIDGLADGSVDIVIGTHRLLQTGVRWKDLGLVVVDEEQRFGVEHKEHIKSLRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDKQIAAALRRELLRDGQAFYVHNRVSSIDAAAARVRELVPEARVVVAHGQMPEDLLETTVQRFWNREHDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPQVPLTETAYDRLATIAQNNELGAGMAVALKDLEIRGAGNVLGIEQSGHVAGVGFDLYVRLVGEALETYRDAKDVRIDLPVDAHLPPDYIASDRLRLEGYRRLAAASSDREVAAVVDELTDRYGALPEPARRLAAVARLRLLCRGSGITDVTAASA-ATVRLSP
>ACTINO135_YP_977172-NC_008769 mfd putative transcription-repair coupling factor mfd {Mycobacterium bovis BCG str. Pasteur 1173P2} [Chromosome ]
IAPASARLLVASALA-PLLVVTATGREADDLAAELRGVFG-DAVALLPSWETLPHERLSPGVDTVGTRLMALRRLGVVVTSVRSLLQPMTP-QLGMMEPLTLTVGDESPFDGVVARLVELAYTRVDMVGRRGEFAVRGGILDIFAPTAEHPVRVEFWGDEITEMRMFSVADQRSIPIDITLVAFACRELLLSEDAVDGMEAVLPVLWLLTDQLPDGTPAMLRAHIATGGYAALVAPGTGTAHRVVERLSEVLQGPLRDGVIIPGLVVITETDLTGSKRRNIVDPLALTAGDLVVHDQHGIGRFVEMVERTVGGARREYLVLEYASTDKLYVPMDSLDQLSRYVG--GQAPALSRLGGSDWANTKTKARRAVREIAGELVSLYAKRQASPGHAFSPDTPWQAELEDAFGFTETVDQLTAIEEVKADMEKPIPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFGERMSGFPVTIKGLSRFTDAAESRAVIDGLADGSVDIVIGTHRLLQTGVRWKDLGLVVVDEEQRFGVEHKEHIKSLRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDKQIAAALRRELLRDGQAFYVHNRVSSIDAAAARVRELVPEARVVVAHGQMPEDLLETTVQRFWNREHDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPQVPLTETAYDRLATIAQNNELGAGMAVALKDLEIRGAGNVLGIEQSGHVAGVGFDLYVRLVGEALEAYRAAKDVRIDLPVDAHLPPDYIASDRLRLEGYRRLAAASSDREVAAVVDELTDRYGALPEPARRLAAVARLRLLCRGSGITDVTAASA-ATVRLSP
>ACTINO135_NP_335485-NC_002755 mfd transcription-repair coupling factor {Mycobacterium tuberculosis CDC1551} [Chromosome ]
IAPASARLLVASALA-PLLVVTATGREADDLAAELRGVFG-DAVALLPSWETLPHERLSPGVDTVGTRLMALRRLGVVVTSVRSLLQPMTP-QLGMMEPLTLTVGDESPFDGVVARLVELAYTRVDMVGRRGEFAVRGGILDIFAPTAEHPVRVEFWGDEITEMRMFSVADQRSIPIDITLVAFACRELLLSEDAVDGMEAVLPVLWLLTDQLPDGTPAMLRAHIATGGYAALVAPGTGTAHRVVERLSEVLQGPLRDGVIIPGLVVITETDLTGSKRRNIVDPLALTAGDLVVHDQHGIGRFVEMVERTVGGARREYLVLEYASTDKLYVPMDSLDQLSRYVG--GQAPALSRLGGSDWANTKTKARRAVREIAGELVSLYAKRQASPGHAFSPDTPWQAELEDAFGFTETVDQLTAIEEVKADMEKPIPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFGERMSGFPVTIKGLSRFTDAAESRAVIDGLADGSVDIVIGTHRLLQTGVRWKDLGLVVVDEEQRFGVEHKEHIKSLRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDKQIAAALRRELLRDGQAFYVHNRVSSIDAAAARVRELVPEARVVVAHGQMPEDLLETTVQRFWNREHDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPQVPLTETAYDRLATIAQNNELGAGMAVALKDLEIRGAGNVLGIEQSGHVAGVGFDLYVRLVGEALEAYRAAKDVRIDLPVDAHLPPDYIASDRLRLEGYRRLAAASSDREVAAVVDELTDRYGALPEPARRLAAVARLRLLCRGSGITDVTAASA-ATVRLSP
>ACTINO135_YP_001286983-NC_009565 transcription-repair coupling factor mfd {Mycobacterium tuberculosis F11} [Chromosome]
IAPASARLLVASALA-PLLVVTATGREADDLAAELRGVFG-DAVALLPSWETLPHERLSPGVDTVGTRLMALRRLGVVVTSVRSLLQPMTP-QLGMMEPLTLTVGDESPFDGVVARLVELAYTRVDMVGRRGEFAVRGGILDIFAPTAEHPVRVEFWGDEITEMRMFSVADQRSIPIDITLVAFACRELLLSEDAVDGMEAVLPVLWLLTDQLPDGTPAMLRAHIATGGYAALVAPGTGTAHRVVERLSEVLQGPLRDGVIIPGLVVITETDLTGSKRRNIVDPLALTAGDLVVHDQHGIGRFVEMVERTVGGARREYLVLEYASTDKLYVPMDSLDQLSRYVG--GQAPALSRLGGSDWANTKTKARRAVREIAGELVSLYAKRQASPGHAFSPDTPWQAELEDAFGFTETVDQLTAIEEVKADMEKPIPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFGERMSGFPVTIKGLSRFTDAAESRAVIDGLADGSVDIVIGTHRLLQTGVRWKDLGLVVVDEEQRFGVEHKEHIKSLRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDKQIAAALRRELLRDGQAFYVHNRVSSIDAAAARVRELVPEARVVVAHGQMPEDLLETTVQRFWNREHDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPQVPLTETAYDRLATIAQNNELGAGMAVALKDLEIRGAGNVLGIEQSGHVAGVGFDLYVRLVGEALEAYRAAKDVRIDLPVDAHLPPDYIASDRLRLEGYRRLAAASSDREVAAVVDELTDRYGALPEPARRLAAVARLRLLCRGSGITDVTAASA-ATVRLSP
>ACTINO135_YP_001282325-NC_009525 mfd transcription-repair coupling factor {Mycobacterium tuberculosis H37Ra} [Chromosome]
IAPASARLLVASALA-PLLVVTATGREADDLAAELRGVFG-DAVALLPSWETLPHERLSPGVDTVGTRLMALRRLGVVVTSVRSLLQPMTP-QLGMMEPLTLTVGDESPFDGVVARLVELAYTRVDMVGRRGEFAVRGGILDIFAPTAEHPVRVEFWGDEITEMRMFSVADQRSIPIDITLVAFACRELLLSEDAVDGMEAVLPVLWLLTDQLPDGTPAMLRAHIATGGYAALVAPGTGTAHRVVERLSEVLQGPLRDGVIIPGLVVITETDLTGSKRRNIVDPLALTAGDLVVHDQHGIGRFVEMVERTVGGARREYLVLEYASTDKLYVPMDSLDQLSRYVG--GQAPALSRLGGSDWANTKTKARRAVREIAGELVSLYAKRQASPGHAFSPDTPWQAELEDAFGFTETVDQLTAIEEVKADMEKPIPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFGERMSGFPVTIKGLSRFTDAAESRAVIDGLADGSVDIVIGTHRLLQTGVRWKDLGLVVVDEEQRFGVEHKEHIKSLRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDKQIAAALRRELLRDGQAFYVHNRVSSIDAAAARVRELVPEARVVVAHGQMPEDLLETTVQRFWNREHDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPQVPLTETAYDRLATIAQNNELGAGMAVALKDLEIRGAGNVLGIEQSGHVAGVGFDLYVRLVGEALEAYRAAKDVRIDLPVDAHLPPDYIASDRLRLEGYRRLAAASSDREVAAVVDELTDRYGALPEPARRLAAVARLRLLCRGSGITDVTAASA-ATVRLSP
>ACTINO135_NP_215536-NC_000962 mfd transcription-repair coupling factor Mfd (TRCF) {Mycobacterium tuberculosis H37Rv} [Chromosome ]
IAPASARLLVASALA-PLLVVTATGREADDLAAELRGVFG-DAVALLPSWETLPHERLSPGVDTVGTRLMALRRLGVVVTSVRSLLQPMTP-QLGMMEPLTLTVGDESPFDGVVARLVELAYTRVDMVGRRGEFAVRGGILDIFAPTAEHPVRVEFWGDEITEMRMFSVADQRSIPIDITLVAFACRELLLSEDAVDGMEAVLPVLWLLTDQLPDGTPAMLRAHIATGGYAALVAPGTGTAHRVVERLSEVLQGPLRDGVIIPGLVVITETDLTGSKRRNIVDPLALTAGDLVVHDQHGIGRFVEMVERTVGGARREYLVLEYASTDKLYVPMDSLDQLSRYVG--GQAPALSRLGGSDWANTKTKARRAVREIAGELVSLYAKRQASPGHAFSPDTPWQAELEDAFGFTETVDQLTAIEEVKADMEKPIPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFGERMSGFPVTIKGLSRFTDAAESRAVIDGLADGSVDIVIGTHRLLQTGVRWKDLGLVVVDEEQRFGVEHKEHIKSLRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDKQIAAALRRELLRDGQAFYVHNRVSSIDAAAARVRELVPEARVVVAHGQMPEDLLETTVQRFWNREHDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPQVPLTETAYDRLATIAQNNELGAGMAVALKDLEIRGAGNVLGIEQSGHVAGVGFDLYVRLVGEALEAYRAAKDVRIDLPVDAHLPPDYIASDRLRLEGYRRLAAASSDREVAAVVDELTDRYGALPEPARRLAAVARLRLLCRGSGITDVTAASA-ATVRLSP
>ACTINO135_YP_908048-NC_008611 mfd transcription-repair coupling factor Mfd (TrcF) {Mycobacterium ulcerans Agy99} [Chromosome ]
VGPASARSFVASALA-PLLVVTATGREADDVTAELRGVFG-EAVALFPSWETLPHERLSPGVDTVGARLLLLRRLRVVVTAVRSLLQPMTP-QLGRQEPVSLSVGQEIGFDEVIARLVELAYTRVDMVGRRGEFAVRGGILDLFAPTAEHPVRVEFWGDEITEMRMFSVADQRSIPIEVTLVAVACRELLLTEDPTDGMEALLPVLRLLTDQLAEGTPAMLRAHVSTGGYAVMVEPGTGTAHRMVERLAEVLKGPLRDGVIVPGLVVVTETNLTGNKRRNTVDPLALTAGDLVVHDQHGIGRFVEMVERTVGGARREYLVLEYASSDKLYVPMDSLDQLSRYVG--GQAPALSRLGGSDWTNTKTKARKAVREIAGELVALYAKRQASPGHAFAPDTPWQAEMEDAFGFTETVDQLTAITEVKRDMEKSIPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFTDRMAGFPVTVKGLSRFTDPAESRTVIEGMADGSVDVVIGTHRLLQTGVRWKDLGLVVVDEEQRFGVEHKEHIKSLRSHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDKQVAAALRRELLRDGQAFYVHNRASSIDDTAARIRKLVPEARVVAAHGQMPEDLLERTVQGFWQREFDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPQAPLTETAYDRLATIAQNNELGAGMAVALKDLEIRGAGNVLGVEQSGHVAGVGFDLYLRLVGEAVEAYRAAKDVRIDLPVDAHLPPDYIGSDRLRLEAYRRLATATSDSGVAAVVDELIDRYGALPEPALRLVAVARLRLLCRASGITDVSAPSS-ATVRLAP
>ACTINO135_NP_959921-NC_002944 mfd Mfd {Mycobacterium avium subsp. paratuberculosis K-10} [Chromosome ]
VGPASTRLFVASALA-PLLVVTATGREADDLTAELRGVVG-DAVAVFPSWETLPHERLSPGVDTVGARLTVLRRLQVVVTAVRSLLQPMTP-QLGLVEPVTLSVGQEIEFEHVIARLVELAYSRVDMVGRRGEFAVRGGILDVFPPTAEHPVRVEFWGDEVSEMRMFSVADQRSIPIAVTVISVPCRELLLTEDAVDGMEALLPVLRLLTDQLADRTPAMLRAHVSTGGHAAVVAPGTGTAHRVVERLAEVLKGPLHDGIVIPGLVVITETDLTGSKRRNTVDPLALTAGDLVVHDQHGIGRFVEMTERTVGGARREYLVLEYASSDKLYVPMDSLDQLSRYVG--GQAPALSKLGGSDWANTKTKARRAVREIAGELVSLYAKRQASPGHAFSPDTPWQAEMEDAFGYTETVDQLTAITEVKSDMEKPIPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLADQHLQTFTDRMAGFPVTVKGLSRFTDAAESRAVIEGLADGSVDIVIGTHRLLQTGVRWKDLGLVVVDEEQRFGVEHKEHIKSLRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERYPVLTYVGPHDDKQVAAALRRELLRDGQAFYVHNRVSSIDRAAARVRELVPEARVVVAHGQMPEERLERTVQGFWNREYDILVCTTIVETGLDISNANTLIVERADTFGLSQLHQLRGRVGRSRERGYAYFLYPPHAPLTETAYDRLATIAQNNELGAGMAVALKDLEIRGAGNVLGVEQSGHVAGVGFDLYVRLVGEAVEAYRAAKDVRIDLPVDAHLPPDYIASDRLRLEAYRRLAAAGSDDEIDAVVEELVDRYGALPEPALRLVAVARLRLLCRAAGITEVS-APSAATVRLSP
>ACTINO135_YP_121091-NC_006361 mfd putative transcription-repair coupling factor {Nocardia farcinica IFM 10152} [Chromosome ]
VAPAAARSFVAATVA-PVVVVTATGREADDLTVELTEILG-DSVAQFPSWETLPHERLSPSADTVGRRLAVLRRLRVVVTTVRSLMQPMAA-GLGDIEPIVLREGAELDFDDLLTRLVEFAYTRVDMVGKRGEFAVRGGILDLFPPTADHPVRVEFWGDEVTQVRAFAVADQRSLPIEITVVATPCRELLLTAPPVEGMEALLPVLQLLTEQLAAGTHASLRAHVTTGGRAVVVVAGHGTAQRVLERLADVLCGTLHDGVVF--LVVVAESDLTGNKRRNQVDPLALSAGDMVVHDQHGIGRFVEMIERTVGGARREYLVIEYAPGDRLFVPMESLDQLSRYVG--GEMPSLSKLGGSDWANTKRKARKAVREIAGELVQLYAARQAAPGHAFGPDTPWQKEMEDAFAFTETVDQMTAIAEVKADMEKPVPMDRVVCGDVGYGKTEIAVRAAFKAVQDGKQVVVLVPTTLLAQQHLQTFTERVAGFPVTVKGLSRFTDPAESRAVLEGMADGSVDIVVGTHRLLQTGVRWKDLGLVIVDEEQRFGVEHKEHIKALRTHVDVLTMSATPIPRTLEMSLAGIREMSTILTPPEERHPVLTYVGAYNDKQVTAAIRRELLRDGQVFYVHNRVSSIDKAAKRIRDLVPEARVVVAHGQMNEDTLERTVQGFWQREYDVLVCTTIIETGLDISNANTLIVERADTLGLSQLHQLRGRVGRSRERGYAYFLYPPEKPLTETAYDRLATIAQNSDLGAGMAVAMKDLEIRGAGNVLGAEQSGHVAGVGFDLYVRLVGEAVEAYRAAKEVRIDLPVDAHIPPDYVASDRLRLEAYRKLAAAQDDSALASVVEELVDRYGPLPVEVGRLVSVAKLRLLAREYGITEIA--VTGTTLKISP
>ACTINO135_YP_705696-NC_008268 transcription repair coupling factor {Rhodococcus sp. RHA1} [Chromosome]
VAPGPARPFVAAALA-HLLLVTATGREADDLTAELREMIG-DAVAQFPSWETLPHERLSPSADTVGRRVEVLRRLQVIVTTVRSLVQPMAP-GLGEIEPVTLRVGVEHDFDGLIQRLVEMAYTRVDMVGKRGEFAVRGGILDLFSPTADHPVRVEFWGDEVTELRAFSVADQRSLPLDIAVIAPPCRELLLTEDPVEGMEALLPVLRLLTDVLPESAHVSLRAHVTTGGRAVIVVAGAGTAHRVLERLREVLRGSLHDGLVFPGLVIVTEADLTGNKRRNQVDPLALTAGDMVVHDQHGIGRFVEMVERTIGGARREYLVIEYAAGDRLFVPMESLDQLSRYVG--GELPALSKLGGSDWANTKRKARKAVREIAGELVQLYAARQAAPGHAFGPDTPWQKEMEDAFAFTETHDQLTVISEVKADMEKAVPMDRVVIGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLAQQHLQTFTERMAAFPVTVRGLSRFTDAGDSKETIAGMADGEIDVVVGTHRLLQTGIRWKDLGLVIVDEEQRFGVEHKEHIKALRTHVDVLTMSATPIPRTLEMSMAGIREMSTILTPPEERHPILTYVGAYADKQVAAAIRRELLRDGQVFYVHNRVSSIDKSAQRIRELVPEARVVVAHGQMNEDTLERTVQGFWERDYDVLVCTTIIETGLDISNANTLIVERADSLGLSQLHQLRGRVGRSRERGYAYFLYPPEKPLTETAYDRLATISQNSDLGAGMAVAMKDLEIRGAGNVLGAEQSGHVAGVGFDLYVRLVGEAVEAFRAAKEVRIDLPVDAHIPPDYVTSDRLRLEGYRKLAAATELDGITAVVDELADRYGPLPEEVRRLVSVAKLRLLAREYGLEEIAVVGTQIAPALPD
>ACTINO135_YP_001626109-NC_010168 transcription-repair coupling factor {Renibacterium salmoninarum ATCC 33209} [Chromosome]
GAPNGLRAPLLAEVAGVVLAVTATSRESEDLVAALRAYLPEDAVADFPSWETLPHELLSPRSDTVGRRLSVLRRLRIVVAPVRAVVQPIVQ-GLADLEPVELSIGQRAPFDQVIRRLADAAYARVDMVTHRGEFAVRGGIIDVFPPTDPHPVRIEFFGDELESMRWFAVADQRTLT--SSLFAPPCRELLITPEAVEGMESLTPVLVPVVAEFPPGSIEFIGSRVRGQWRVVVATDGPGPAQRLAELFHDVTTAAVGHGFVLDGIGLLTEADLLGRKRRNAVDPLQLRGGDFVVHEQHGIGRFLELIQRKVAGGSREYLVLEYAPGDRLFVPTDQLDQITAYVG--GDAPALSKMGGSDWASTKNKARKAVKEIAGELIRLYSARMASRGFSFSADTPWQRELEEAFPYVETPDQLTTINEVKADMEREIPMDRLVSGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLAQQHYETFSERFSGFPVRVKPLSRFQSGKEAKETAEGVANGSIDVVIGTHRLLSKDFAFKDLGLVIVDEEQRFGVEHKEQLKKMRNNVDVLAMSATPIPRTLEMSLTGIRETSTLATPPEERHPVLTYVGPYTDKQASAAIRRELMREGQVFFVHNRVSSIERIAAHVQQLVPEARIAVAHGQMSESRLEQIIVDFWEKRFDVLVCTTIIETGLDISNANTLIVDGADKYGLSQLHQLRGRVGRGRERAYAYFLYPAEKPLGEVALERLKAVAAHNELGAGMQLALKDLEIRGAGNLLGGEQSGHIAGVGFDLYIRLVGEAVADYRGEADMKIELPVNAHLPHDYVPGERLRLEAYRKLAAAASNAAIDEVLEELVDRYGEPPAAVVNLIAVDRFRVAAREVGLTDVA--VQGNFVKFFP
>ACTINO135_YP_947136-NC_008711 mfd transcription-repair coupling factor {Arthrobacter aurescens TC1} [Chromosome ]
SAPQGMRAVLLAEMAGVVLAVTATGREAEDLTAALASYLPAESVATFPSWETLPHERLSPRSDTVGRRLSVLRRLRVVVAPVRAVVQPIVA-GLGDLVPVTLQVGQERSFTEVVRALSDAAYARVDMVTHRGEFAVRGGILDVFPPTEDHPIRVEFFGDEVDQMRWFAVADQRSLS--AGLHAPPCREILITASAVEGMESLAPVLVPFVDQLPAGSLEFIGSRVREQWRVVVVTDGPGPAQRLAELFHDVTTAAVGRGFVLDGLGLLTEADLLGRKRRNAVDPLQLHAGDFVVHEQHGIGRFVELIQRKVAGGLREYLVLEYAPGDRLFVPTDQLDQVTRYVG--GDAPALSKMGGADWASTKSKARKAVKEIAGELIRLYSARMASRGHAFAPDTPWQRELEEAFPYVETPDQLTTINEVKADMEREIPMDRLVSGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLAQQHYETFTERFSGFPLRVKPLSRFQSSKEAKETAEGVKSGAVDVVIGTHRLLSKDFQFKDLGLVIVDEEQRFGVEHKEALKKMRTNVDVLAMSATPIPRTLEMSLTGIRETSTLATPPEERHPVLTYVGPYTNKQTSAAIRRELMREGQVFFVHNRVSSIERIAAQIRELVPEARVEVAHGQMSESRLEKIIVDFWEKRFDVLVCTTIIETGLDISNANTLIVDGADKYGLSQLHQLRGRVGRGRERAYAYFLYPSEKPLGEVALERLKAVAAHNELGAGMQLAMKDLEIRGAGNLLGGEQSGHIQGVGFDLYIRLVGEAVAEYRGEAEMKIELPVNAHLPHDYVPGERLRLEAYRKLASAITYEAIDEVLAELVDRYGEPPLPAQNLIAVARFRVGAREAGLSDVA--LQGNFIRFSP
>ACTINO135_YP_830739-NC_008541 transcription-repair coupling factor {Arthrobacter sp. FB24} [Chromosome 1]
SAPAGLRAALLAEMSDLVLAVTATGREAEDLTAALRAFLPAGSVAEFPSWETLPHERLSPRSDTVGRRLSVLRRLRVVVAPVRAVVQPIVA-GLGDLKPVTLKVGQDAPFSDVVRSLSDAAYARVDMVTHRGEFAVRGGILDVFPPTEDHPIRVEFFGDEVDQMRWFAVADQRSLS--SGLHAPPCREILITPSTVEGMESLAPVLVPFVEQLPGGSIEFIGSHVRDQWRIVVATEGPGPAQRLAELFHDVTTAAVGRGFVLDGLGLLTEADLLGRKRRNAVDPLQLVAGDHVVHEQHGIGRFVELIQRKVAGGVREYLVLEYAPGDRLFVPTDQLDQVTRYVG--GDTPALSKMGGSDWASTKSKARKAVKEIAGELIRLYSARMASKGFAFGPDTPWQRELEEAFPYVETPDQLTTINEVKADMEREIPMDRLVSGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLAQQHYETFTERFSGFPLRVKPLSRFQASKEAKETAEGVKNGSVDVVIGTHRLLSKDFAFKDLGLVIVDEEQRFGVEHKEALKKMRTNVDVLAMSATPIPRTLEMSLTGIRETSTLATPPEERHPVLTYVGPYTDKQTSAAIRRELMREGQVFFVHNRVSSIERTAAKIRELVPEARVEVAHGQMSESRLEQIIVDFWEKRFDVLVCTTIIETGLDISNANTLIVDGADKYGLSQLHQLRGRVGRGRERAYAYFLYPSEKPLGEVALERLKAVAAHNELGAGMQLAMKDLEIRGAGNLLGGEQSGHIQGVGFDLYIRLVGEAVADFR--AEMKIELPVNAHLPHDYVPGERLRLEAYRKLASALTNEAIDEVLAELVDRYGEPPLPAQNLIAVARFRVGAREAGLSDVA--LQGNFIKFSP
>ACTINO135_YP_001535738-NC_009953 transcription-repair coupling factor {Salinispora arenicola CNS-205} [Chromosome]
TAPPALRPFAVAAIAGPVLAVTATTREADDLAAALGCLIPADQVAVFPSWETLPHERLSPRSDTVGRRLAVLRRLRVIVAPVRSLLQPQLK-GLGELEPVRLAAGDEADLEDLARRLTDLAYARVDLVTKRGEFAVRGGILDVFPPTDEHPARVEFWGDEVEEIRTFAVADQRTIEGVG-LWAPPCRELLLTPAPVEGMESLAPVLILLLDTMPAGTHDDLKRWAGEGWSVALVFEGHGPAQRAVEVLHDVSRGSLTGGFVDAAFVLLTGDDVTGGRRRNTIDPLELRAGDHVVHEQHGIGRYVELVQRTVNGASREYLVIEYAPGDRLFVPTDQLDQLSRYVG--GEQPTLHKMGGSDWQKSKARARKAVREIAAQLIQLYAARKASKGHPFGPDTPWQRELEDAFPWQETPDQLAAIEEVKRDMEQTVPMDRLICGDVGYGKTEIAVRAAFKAIQDGRQVAVLVPTTLLVQQHYNTFAERMSQFPATIRQLSRFQTSKEAEQTLTMAADGTADIVIGTHRLLQASARFKSLGLVIVDEEQRFGVEHKEHLKSVRASVDVLSMSATPIPRTLEMAITGIREMSTIATPPEERHPVLTAVGAYDERQVAAAIHRELLRDGQVFYLHNRVESIERAARRLRELVPEARVAVAHGQLGEEALERVMVGFWEKQFDVLVCTTIVESGIDIPNANTLIVERADLLGLAQLHQIRGRVGRGRERAYAYFLYPSDKPLTEHAHERLATIAQHTELGAGMYVAMKDLEIRGAGNLLGGEQSGHIEGVGFDLYVRMVGEAVQAFK-GTEVKVDLPVDAHLPHDYVGVERLRLEMYRKLAEARDEERLRAVVAELTDRYGEPPAPVQNLVAVARFRLLARRYGLTDVSMQGRH--LRFGP
>ACTINO135_YP_001157739-NC_009380 transcription-repair coupling factor {Salinispora tropica CNB-440} [Chromosome]
TAPPALRPFAVAAVAGPVLAVTATSREAEDLAVALGSLIPADQVAVFPSWETLPHERLSPRSDTVGRRLAVLRRLRVVVAPVRSLLQPQLK-GLGELEPVRLSAGDEADLEDVARRLTDMAYARVDLVTKRGEFAVRGGILDVFPPTDEHPSRVEFWGDEVEEIRTFAVADQRTIELVD-LWAPPCRELLLTPPPVEGMESLAPVLILLLDSMSAGTHDELRRWAGEGWSVALVFEGHGPAQRAVEVLHDVSRGSLTGGFVAEAFVLLTGDDVTGGRRRNTIDPLELRAGDHVVHEQHGIGRYVELVQRTVNGASREYLVIEYAPGDRLFVPTDQLDQLSRYVG--GEQPTLHKMGGSDWQKSKARARKAVREIAAQLIQLYAARKASKGHSFGPDTPWQRELEDAFPWQETPDQLAAIEEVKRDMEQTVPMDRLICGDVGYGKTEIAVRAAFKAIQDGRQVAVLVPTTLLVQQHYNTFAERMSQFPATIRQLSRFQTPKEAEQTLEMAAAGTADIVIGTHRLLQASARFRSLGLVIVDEEQRFGVEHKEHLKSVRASVDVLSMSATPIPRTLEMAITGIREMSTIATPPEERHPVLTAVGAYDERQVAAAIHRELLRDGQVFYLHNRVESIERAARRLRELVPEARVAVAHGQLGEEALERVMVGFWEKEFDVLICTTIVESGIDIPNANTLIVERADLLGLAQLHQIRGRVGRGRERAYAYFLYPSDKPLTEHAHERLATIAQHTELGAGMYVAMKDLEIRGAGNLLGGEQSGHIEGVGFDLYVRMVGEAVQAFK-GPEIKVDLPVDAHLPHDYVGVERLRLEMYRKLAEARDEERLRAVVAELTDRYGEPPAPVQNLVAVARFRLLARHYGLTDVSMQGRN--IRFGP
>ACTINO135_YP_922134-NC_008699 transcription-repair coupling factor {Nocardioides sp. JS614} [Chromosome ]
TGPEALRPFVVAGLV-SVLAVTATSREAEDLVEALGDLLDPARVAYYPSWETLPHERLSPRSDTVGRRLAVLRRLDVVVAPVRSVLQPQVK-GLGDLEPVELEPGDTAPLDDVVRRLAAAAYTRVDLVEKRGEFAVRGGIVDVFPPTEEHPLRVELWGDDVEEIRSFSVADQRTLGKAD-LWAPPCRELLLTDEAVEGMESLAPVLVLLVDLMPADTHKDIETWRSAGHRVVVLHAGHGPAQRMVEVLGEVTCGAIDHGFVDETLVLLTGEDLSGQRRKRQIDPLELSAGDYVVHEQHGVGRFVEMKQREVGGAVREYLVLEYGAPDRLYVPADALDQVTRYVG--GEQPSLDRLGGGDWTKRKNRARKAVREIAAELIKLYAARQATRGHAFGPDTPWQRELEDAFPFHETPDQLSTVDEVKGDMMRTVPMDRLVCGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVTQHLSTFAERMSGFPVILKALSRFQTDAEAREVIAAMADGSVDIVVGTHRLLNPDIRFKDLGLIIVDEEQRFGVEHKEQMKRLRTSVDVLSMSATPIPRTLEMAITGIREMSTITTPPEERHPVLTYVGAYEDRQIVAAVRRELLREGQVFYIHNRVSSIEKAAARIKELVPEARVATAHGQMGEHQLEQVMLDFWEKRFDVLVCTTIVESGLDVSNANTMIIERADTLGLSQLHQLRGRVGRSRERAYAYFLYPPEKPLTETAHERLATLAQHSDLGGGMAIAMKDLEIRGAGNLLGGEQSGHIADVGFDLYVRLVGEAVNDFKGENEVRIELPVDAHLPHDYIPSERLRLEMYKRLAEVRSDEDVDLVNEELLDRYGEPPQEVVSLLIVARFRARARRAGVGEVTIAGRN--VRFAP
>ACTINO135_GEBA2500939929 Ksed_07020 transcription-repair coupling factor (mfd) [Kytococcus sedentarius 541, DSM 20547]
TAVPGVRPWAAAVLAEVVLLATATGREAEDLAASLRSLLPPQSVAVFPSWETLPHERLSPRSDTVGQRLAVLRRLRVVVSAVRSLLQPLPA-GLGDLVPVSVQAGETRDPEEFIEALVAAAYARTDLVEKRGEFAVRGGIVDVFPPTEDHPLRVEFWGDEVEEVRWFRVADQRSLEIAPGLWAPPCRELLLTEEAVEGMESLTPVLVTLLDVLPDGSRDDVRAALAAGRRVVLLTDGPGLAKRLVEVLGEICTASWGPGVGLPGLTIVSEQDLTGQRRRKMVDPLQLNPGDFIVHEQHGVGRFIEMVQRTVGGATREYLVLEYASADRLFVPTDQLDQITRYVG--GEAPSLNRLGGADWSKTKSKARKHVKQIANELIQLYSARMATQGHAFAPDSPWQRELEDTFAYIETTDQLSSIEEVKADMEKSVPMDRLICGDVGYGKTEIAVRAAFKAIQDSKQVAVLVPTTLLVQQHLQTFTERYAQFPVTVRALSRFSSDADAKATIEGLRDGSVDLVIGTHRLLSSSVRFKDLGLVIIDEEQRFGVEHKEQLKTLRTAVDVLAMSATPIPRTLEMAVTGIREMSTLATPPEERHPVLTYVGAYEEKQIAAAIHRELLREGQVFYVHNKVATIDKVASRLRELVPEARIEVAHGQMGEHRLEQVVTDFWERKFDVLVSTTIVETGLDIANANTLILDRADTFGLSQLHQLRGRVGRGRERAYAYFLYPPEKPLTETAHDRLRTIASHTDLGAGMQVAMKDLEIRGAGNLLGGEQSGHIAGVGFDLYVRMVGEAVARAKDGVEVKVELPVDAHLPHDYVPGERLRLEVYKKLAAVKDDAELADIIAEVTDRYGTPPQPVRALFEVARLRTLARRAGVSDIS--AMGSKIRFAP
>ACTINO135_YP_288485-NC_007333 transcription-repair coupling factor {Thermobifida fusca YX} [Chromosome ]
VAPPSVRPLIVAGLAVPVLALTATEREAADLNSALGSLLPADSVALFPAWETLPHERLSPRSDTVGQRLAVLRRLRVVVAPIRSVLQPLVS-GLGDLQPVRVREGDSVALDELVQSLVDIGYSRVDLVEKRGDIAVRGGILDVFPPTEEHPLRLEFWGDTVEEIRYFQVADQRSISAAEGLFAPPCRELLLTDTAVEGMEAFAPVLALLLDLLPPGTHADVKSWLHEGWRVVLLTPGQGPAERLASMLRDVTTGLLEHGFVWRSTVLLTETDLVGQRRRG-VDPLQLKPGDYVVHEQHGIGRYVEMVSRTIQGATREYLVIEYAPGDRLFVPTDQLDEVTRYVG--GDSPTLSKMGGSDWAKAKSRARKAVREIAGDLIRLYSARHASPGHAFSPDTPWQRELEDAFPYVETPDQLAAIEEVKRDMEKPVPMDRLICGDVGYGKTEVAVRAAFKAVQDGKQVAVLVPTTLLVQQHLSTFTERYASFPVTVRPLSRFQSDAEIERIREGMRTGEVDVVIGTHRLLSPETQFKDLGLVIIDEEQRFGVEHKEALKRLRTQVDVLSMSATPIPRTLEMGLTGIREMTTILTPPEERHPVLTFVGPYDEKQIAAAIRRELMREGQVFFVHNRVASIERAAATVSRLVPEARVAWAHGQMNEHQLERVMVDFWEKKFDVLVCTTIVESGLDVPNANTLIVDRADTYGLAQLHQLRGRVGRGRERAYAYFLYPPDKPLTETAHERLATVAQHTESGAGMYVAMKDLEIRGAGNILGTEQSGSIAGVGFDLYVRMVGEAVRELKGDVETKVELPINAHIPHDYVPGERLRLEAYRRIAEVASEDDIAAIREELLDRYGEPPQPVDNLLAVARFRVLARSAGLTDVV--LQGTQIRFAP
>ACTINO135_GEBA2501679255 Tbis_3135 transcription-repair coupling factor [Thermobispora bispora R51, DSM 43833]
IAPAALRPFVVAALA-PVLAVTATEREAEDLAAALDSLMDESGVAVFPAWETLPHERLSPRSDTVGRRLAVLRRLRVVVAPVRAVLQPIVA-GLGDLEPVRLRPGDEADLDEVVARLVDNGYHRVDMVERRGEVAVRGGLVDVFPPTEEHPLRMEFWGDTVEEIRWFKVADQRSLEVAPGLFAPPCRELPLTEEPVEGMETFAPVLALLLDHMPVRSAADIKGWLEAGKTVVLLSEGHGPAERLVELLRGVTTGRIAHGFVTPD-AVLTHLDVAGQRRRNMVDPLQLKPGDYVVHEQHGVGRYVEMVQRTVQGATREYLVIEYA-GDRLYVPTDQLDEVTRYVG--GETPTLNRMGGSDWQKTKSRARKAVREIAAELIRLYSARMASPGFAFSPDTPWQREMEDAFPYVETKDQLEAIEEVKRDMERPVPMDRLICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVHQHLSTFGERFAGFPVTVRPLSRFQSDAEIRETLDGLREGTVDVVIGTHRLLSPDVKFKDLGLLIVDEEQRFGVEHKEAMKRMRTEVDVLAMSATPIPRTLEMGLTGIREMSTILTPPEERHPVLTFVGPYDEKQIAAAIRRELMRDGQTFFVHNRVRSIDRVAARLAELVPEARIAVAHGQMNEAQLEKIMVDFWERAYDVLVCTTIVESGLDVPNANTLIVDRADSYGLAQLHQLRGRVGRGRERGYAYFLYPPDVPLTETAHERLATIAQHTEMGAGMYVAMKDLEIRGAGNILGTEQSGHIAGVGFDLYVRMMAEAVEEQKSKPEVKVELPINAHVPHEYVTSERLRLEAYKRIAAIESEEDIAAVREELTDRYGRPPQEVENLLEVARFRIKAREAGLTDVTLQGRQ--IRFSP
>ACTINO135_GEBA2501808848 Sros_8585 transcription-repair coupling factor [Streptosporangium roseum NI 9100, DSM 43021]
IAPPALRPFTVAALAKAVLAVTATGREAEDLAAALTSLLDPNTVAVFPAWETLPHERLSPRGDTVGQRLAVLRRLQVIVAPVRAVLQPIVR-GLGDLRPVRLRAGDDADLDGIVHRLVENGYNRVDMVEKRGEVAVRGGLLDVFPPTEEHPLRLEFWGDSVEEIRWFKVADQRSLEVAEGLFAAPCRELLLTEDPMEGMEAFAPVLALLIDHLPAQAAGDIKGWLEEDKVVVLLSEGHGPAERMVELLKGVSTGLIEHGFVSPT-AVLTHLDLVGQKRRNMVDPLQLKVGDHVVHEQHGVGRYVEMVQRTVQGATREYLVIEYA-GDRLYVPTDQLDEVTRYVG--GESPTLNRMGGADWAKAKTKAKKAVKEIAGELIRLYSARMASPGHAFGPDTPWQREMEDAFPYAETGDQLEAIDEVKRDMERGIPMDRLICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHLSTFAERFSGFPLNVRPMSRFQSDGEVKATLEGLREGSVDVVIGTHRLFSPEVRFKELGLIIIDEEQRFGVEHKEAMKHMRTQVDVLAMSATPIPRTLEMGLTGIREMSTILTPPEERHPILTFVGPYDNKQIGAAIRRELMRDGQIFFVHNRVSSINKVAAMLRELVPEARVAVAHGQMNEHQLEKIMVGFWEREFDLLVCTTIVESGLDVPNANTLIVDRADNYGLSQLHQLRGRVGRGRERGYAYFLYPPEKPLTETAHERLATISQHTEMGAGMYVAMKDLEIRGAGNILGAEQSGFIAGVGFDLYVRMMAEAVQKLSGGPDVKVELPINAHIPHDYVTSERLRLEAYKRIAGIGADVHIAAVRDELVDRYGRPPQEVENLLEVARFRIRARVAGLTDVTLQGQH--IRFAP
>ACTINO135_YP_001360819-NC_009664 transcription-repair coupling factor {Kineococcus radiotolerans SRS30216} [Chromosome]
VAPVGVRPALVAAFA-PLLVVTATGRECEDMATWLRCYLPADQVAEFPAWETLPHERLSPRSDTVAQRLAVLRRLRVVVAPIRAVLQPLVK-GLADLEPVRLRAGDDAGLETAVEALAAAAYSRVDMVERRGEFAVRGGILDVFPPTRPHPLRVEFFGDEVEEVRSFSVADQRTLEVEPGVWAPPCRELLLTDVAVEGMESLAPALVPLLDVLPAGTHRELRDLASAGWRIVVTTEGHGPAKRLVEMLSGVTTATVEHGFVAEAAALVTEADITGVRRRNAVDPLTLRPGDFVVHEQHGVGRFVEMVQRTIQGATREYLVLEYAPGDRLFVPTDTLDQVTKYTG--GEAPTLSKMGGSDWAKTKSNARRAVKQIAGDLIKLYSARMATKGYQFGPDTPWQRELEDAFPYVETPDQLASIDEVKADMMKPVPMDRLICGDVGYGKTEIALRAAFKAVQDGKQVAVLVPTTLLVQQHFKTFAERYAQFPVVAKPLSRFTPGKEAKETIKGLADGSVDIVIGTHRLLSGEVAFKDLGLVVVDEEQRFGVEHKEALKTLRTNVDVLAMSATPIPRTLEMAVTGIREMSTLATPPEERHPVLTYVGGQEEKQITAAIRRELLREGQVFYVHNRVSSIERTAARLKELVPEARIATAHGQMGEHRLEQVVVDFWEKRFDVLVCTTIVETGLDISNANTLIVERADAMGLSQLHQLRGRVGRGRERAYAYFLFPPEKPLTETAHDRLATIAQHTDLGSGMAVAMKDLEIRGAGNMLGGEQSGHIAGVGFDLYMRMVADAVADVRNQTEVKIELPVDAHVPHDYVPSERLRLDAYRRLAAANSDTDLVELHAELVDRYGTPPQPVLNLLEVAKFRIVARKAGLREVSLQGKQ--VRFAP
>ACTINO135_GEBA2501612787 Jden_1935 transcription-repair coupling factor [Jonesia denitrificans DSM 20603]
VASMGVRPALLAAMVPPIVVVTATGREADELAQALRCYVPTDAVATLPAWETLPHERLSPRSDTVARRLAVFRRLDVLTVPVRALLQPVVQ-GLGDLTPVRLQVGDSVDLTDVAHQLADAAYARVDMVERRGEFAVRGGILDVFPPHEAHPLRVDFFGDEVDDITYFAVADQRSLDPAPGVWAPPCRELLLTAQAVEGMESLTPVLVPVLDMLPDDVTDDVRGLQVAGWRLVMTSEGHGPAQRMVEQLAGVVPAAAGPGFVATDLAVFSDHDLAGRRRRNVVDPLQLKAGDFVVHEQHGVGKFVELVQRTLGAATREYLVIEYAAGDRLFVPMDQLDQVTKYTG--GEQPSVNKMGGADWQKTKAKARKAIKQIAGELIRLYSARMATQGFAYSPDTPWQRELEDAFAYIETPDQLATIDEVKADMEKMIPMDRLICGDVGYGKTEIAVRAAFKAVQDGKQVAILVPTTLLVQQHYDTFSERYAGFPVTVKALSRFQSDKESQEVISGISEGTVDVVIGTHRLLSGSIHFKDLGLVVIDEEQRFGVEHKETLKQLRTNVDVLAMSATPIPRTLEMAVTGIREMSTLATPPEERHPVLTYVGGYDDKQVIAAVRRELLREGQVFYVHNKVETIESTAARIMDLVPEARVRVAHGRMNEHELEQVILDFWEKRFDVLISTTIIETGLDVSNANTLIVERSDVMGLSQLHQLRGRVGRGRERAYAYFFFPPEKPLTETAHERLQTIAANTELGSGMQVAMKDLEIRGAGNLLGGEQSGHIAGVGFDLYMRMVGEAVADFR-GPEVQIELPIDAHLPHDYVGHERLRLEAYRKIAAATSAQQLADVHEELVDRYGQPPAEVANLFAVATFRNEVRDVGLRDVT--VQGKFVRFAP
>ACTINO135_GEBA2501484827 Bcav_1013 transcription-repair coupling factor [Beutenbergia cavernae HKI 0122, DSM 12333]
IASAGVRPALLAQLLAPLVVVTATGREADELAAALRCYVPDDDVAVLPAWETLPHERLSPRSDTVARRLAVLRRLRALVLPVRAMLQPVVT-GLGDLEPVSVQVGETVDLEDLAARLTAAAYTRTDMVERRGDFAVRGGILDVFPPTEDHPLRLDFWGDEVEEIRWFAVADQRSLEIAPGLWAPPCRELLLTPEAVEGMESLAPALVQVLELVPDDALADLQGLTHDGWRLVLTTEGAGPARRMVEQLLAVTTAVIGKGFVAPELALFSEADLTGRKRRNVVDPLALRTGDHVVHEQHGVGRFVELVQRSIGSATREYLVIEYAAGDRLYVPTDALDQVTKYTG--GESPSLNKMGGSDWAKTKGRARKAVREIAGELIRLYSARMATQGFAFSPDTPWQRELEDAFPHIETPDQVVTIDEVKADMEKSVPMDRLVCGDVGYGKTEIAIRAAFKAVQDGKQVAVLVPTTLLVQQHFETFSERYAGFPVTVKALSRFQTDAEATAVREGVQDGSVDVVIGTHRLLTGEVRFKDLGLVVVDEEQRFGVEHKETLKQLRTNVDVLAMSATPIPRTLEMAVTGIREMSTLATPPEERHPVLTFVGAYEEKQIAAAIRRELLREGQVFYVHNRVESIERAAARLQELVPEARIAVAHGKMNEHQLERVIVDFWEKRFDVLVCTTIIETGLDISNANTLILERADVLGLSQLHQLRGRVGRGRERAYSYFLYPPEKPLTETAHDRLATIAANTDLGSGMQVALKDLEIRGAGNLLGGEQSGHIAGVGFDLYVRMVSEAVARFR-GTDVTIELPIDAHVPHDYIAHERLRLEAYAKVAAARDETAIAAVRDELADRYGPVPEPVERLFAVAALRAKARAHGLTDVT--VQGQFVRFAP
>ACTINO135_GEBA2500932230 Sked_07780 transcription-repair coupling factor (mfd) [Sanguibacter keddieii ST-74, DSM 10542]
IGPAGVRPPLLAAMAVPLVVVTATGREADELASALRCYLPYDDVAVLPAWETLPHERLSPRSDTVAKRIAVFRRLRVLVMPVRALLQPVVD-GLGDLEPVRLETRDRADLADVADRLSAAAYARVDMVERRGEFAVRGGILDVFPPTEDHPLRVEFWGEEVEEIRWFAVADQRSLEIADGVWAPPCREMLLTDDAVEGMESLAPVLVPVLDLVPDDALDDVRGLQHAGWRLIMTTEGHGPAKRMVEQLSGVTPAPLGPGFVAPDIAVFSESDMTGRKRRNVVDPLQLRAGDFVVHEQHGVGRFVELVQRTLGGATREYLVVEYASGDRLFVPTDQLDQVTKYTG--GESPALNKMGGSDWAKTKGRAKKAIKEIASELIRLYSARMATKGHAFGPDTPWQRELEDAFAYTETPDQLATIDEVKQDMEKTIPMDRLVCGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHYDTFAERYAGFPVVVKGLSRFQTDKEAKEIVDGLKEGTVDVVIGTHRLLSGSIKFKDLGLVVVDEEQRFGVEHKETLKQLRTNVDVLAMSATPIPRTLEMAVTGIREMSTLATPPEERHPVLTYVGAYDDKQITAAIRRELLREGQLFYVHNKVDSIDRTAARLKELVPEARIEVAHGKMGEHQLERVIMDFWEKKFDVLVCTTIIETGLDISNANTLILERADMLGLSQLHQLRGRVGRGRDRAYAYFLYPPERPLTETAHDRLATIAANTDLGSGMAVAMKDLEIRGAGNLLGGEQSGHIAGVGFDLYVRMVGEAVAAFRGEPEVTIELPVDAHLPHDYIGHERLRLEAYRKIAAAQDETALTDIRAELVDRYGALPEVVGNLFDVAAFRNYARAAGLSDIT--AQGKFVRFAP
>ACTINO135_GEBA2501673445 Xcel_2685 transcription-repair coupling factor [Xylanimonas cellulosilytica XIL07, DSM 15894]
VGPQGVRAPLLVEAA-PVVVVTATGRQADELAASVRAYLPADEVAVLPAWETLPHERLSPRADTVARRIAVFRRLRVLVMPARALLQPVVS-GLGELEPVALHDGDVADLTDVAERLVAAAYSRVDMVERRGEFAVRGGILDVFPPTEDHPLRVEFWGDEVSEIRWFSVADQRSLEIAQGLWAPPCREILLTASAVEGMESLAPVLVPVLDLVPDDALEEVRRLQRDQWRLVLTTEGHGPAKRMVEQLMAVLPALVGKGFVAPDLAVFSESDLTGRRRRNVVDPLQLRAGDYVVHEQHGVGRFVEMVQRTLGAATREYLVLEYASGDRLFVPMDQLDQVTKYVG--GEAPSLSKMGGADWKNTKAKARKHVKEIAGELIRLYSARMATQGHAFGADTPWQRELEDAFAYIETPDQLSTIDEVKADMEKPTPMDRLVCGDVGYGKTEIAIRAAFKAIQDGKQVAVLVPTTLLVQQHFETFSERYQGFPVKVAALSRFQNPRESEETIKGLKDGTVDVVIGTHRLITGAVQFKDLGLVIIDEEQRFGVEHKETLKQLRTNVDVLAMSATPIPRTLEMAVTGIREMSTLATPPEERHPVLTYVGAYEERQISAAVRRELLREGQVFYVHNRVESIQRTASRLAELVPEARIGVAHGKMGEHQLDQVIRGFWEKELDVLVCTTIVETGLDISNANTLILERADMLGLSQLHQLRGRVGRGRERAYAYFLYPPEKPLTEQAHDRLATMAAHTDLGAGMQIAMKDLEIRGAGNLLGGEQSGHIQGVGFDLYVRMVGEAVQNFR-GPEVTIELPVDAHLPESYIATERLRLEAYKKIAAATDAAALAEVRAELVDRYGPLPDVASALFDVADFRNHARAAGLSDVT--AQGKYVRFAP
>ACTINO135_YP_001505167-NC_009921 transcription-repair coupling factor {Frankia sp. EAN1pec} [Chromosome]
AGPAALRPFAAAAMARTVLAVTATGREAEDLADAVGSLLGSERVAVYPSWETLPHERLSPRADTVGRRLAVLRRLAVVVAPVRSVLQPQVA-RLGELAPVALAKGDTADLEDVTARLVGIAYHRVDLVERRGEMAVRGGILDVFPPTEEHPLRIEFFGDEVDDIRRFSVADQRALPA-EGLFAPPCRELLLTDEPVEGMEALAPVLTLLLDELPAGSRADIKGWLADSWRVLLVTEGHGPAERLVEMMREVTQAQLGAGFVSPTLAVLTETDLAGARRRKGIDPLALSAGDLVVHDAHGVGRYVEMVTRTVAGAKREYLLLEYA-GDRLYVPTDQLEQISRYVG--GEGPSLDRIGGADWGKRKSRARKAVKEIAGELIRLYSARMAAPGHAFGPDSPWQRELEDAFPFRETPDQLAAIDEVKADMEKPVPMDRVICGDVGYGKTEIAVRAAFKAVTDGRQVAVLVPTTLLVQQHFQTFAERYAPFPVTVKAVSRFNAPSEQRAVLDGLANGTVDVVIGTHRLLSSETKFSDLGLVIVDEEQRFGVEHKEHLKKMRTAVDVLTMSATPIPRTLEMSITGIRELSTIDTPPEERHPVLTSVAPYEPRQVTAAIRRELLREGQVFFIHNRVESIDRAAAALRELVPEARIATAHGQMNEDALEQVMVSFWEKKFDVLVCTTIVESGLDISNANTLIVERADNFGLSQLHQLRGRVGRGRERAYAYFLYPADRPLSETAHDRLATIAQHNDLGAGMAVAMKDLEIRGAGNLLGGEQSGHIASVGFDLYVRMVGEAVAEYK--PEVKVELPVDANLPHDYVPSERLRLDAYRRLAGAVSDADIAEVRGELTDRFGLLPEPVENLLAVAGLRVLARRFGVTEITVAGRQ--VRFAP
>ACTINO135_YP_716375-NC_008278 Evidence 2b Function of strongly homologous gene Product type f factor {Frankia alni ACN14a} [Chromosome]
AGPAALRPFAAAALAGPVLAVVATGREAEDLTAALAGLLGPEVVAVFPSWETLPHERLSPRADTVGQRLAVLRRLRIVVAPVRSVLQPQVA-GLGELAPVSLAAGDTADLDEVVARLVGMAYHRVDLVERRGEIAVRGGILDVFPPTEEHPLRVEFFGDEVEDIRRFAVADQRALPEGDGLFAPPCRELLLTEDPVEGMEALAPVLVLLLDDLPAGTHADVKGWLAESWRVLLVTEGHGPAQRLVEMLREVTRGQLVTGFTSDMLAVLTESDIAGARRRKGIDPLALVPGDMVVHDAHGVGRYVEMVTRTVAGAKREYLLLEYA-GDRLYVPTDQLEQITRYVG--GDAPSLDRIGGADWAKRKSRARKAVKEIAGELIRLYSARMAAPGHAFAPDNPWQRELEDAFPFRETPDQLAAIDEVKADMEKPVPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHFQTFSERYAAFPVIVKAMSRFNSAGEQKAVADGLADGTVDVVIGTHRLLSGENRFKDLGLVIVDEEQRFGVEHKEQLKKMRTAVDVLTMSATPIPRTLEMSITGIRELSTIDTPPEERHPVLTSVAPYDTRQVAAAIRRELLREGQVFFIHNRVESIDRAAARLRELVPEARIATAHGQMNEDALEQVMVSFWEKKFDVLVCTTIVESGLDISNANTLVVERADVFGLSQLHQLRGRVGRGRDRAYAYFLYPPDKPLTETAHDRLATIAQHNDLGAGMAVAMKDLEIRGAGNLLGGEQSGHIASVGFDMYVRMVGEAVAEYR--PEVKVELPVDASLPHDYVPSERLRLDAYRRLAGAGTDADIDEVRGELVDRFGPVPEPVENLLAVAGLRVLARSFGVTEITAAGRQ--IRFAP
>ACTINO135_YP_483005-NC_007777 transcription-repair coupling factor {Frankia sp. CcI3} [Chromosome ]
AGPAALRPFAAAALAGPVLAVVATGREAEDLASALGSLLGPDVVTVFPSWETLPHERLSPRADTVGQRLAVLRRLRIVVASIRAVLQPQVA-GLGELAPVTLAEGDTADLDGVVTRLVDIAYHRVDLVERRGEIAVRGGILDVFPPTEEHPLRVEFFGDEVEDIRRFSVADQRALPE-DGLFAPPCSELLLTAQPVEGMEALAPVLVLLLDDLPAGTHADVKGWLAESWRVLLVTEGHGPAQRLVEMLRDVTCGRLATGFTSDTLAVLTESDIAGARRRKGIDPLALLPGDMVVHDAHGVGRYVEMVTRTVAGAKREYLLLEYA-GDRLYVPTDQLEQITRYVG--GDAPSLDRIGGADWAKRKSRARRAVKEIAGELIRLYSARMAAPGHAFAPDSPWQRELEDAFPFRETPDQLAAIDEVKADMEKPVPMDRVICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHFQTFSERYAAFPVVVKAMSRFNSPAEHKAVQEGLATGSVDVVIGTHRLLSGENRFKDLGLVIVDEEQRFGVEHKEQLKKMRTAVDVLTMSATPIPRTLEMSITGIRELSTIDTPPEERHPVLTSVAAYDARQVAAAIRRELLREGQVFFIHNRVETIDRAAARLRDLVPEARIATAHGQLHEDALEQVMVSFWEKKFDVLVCTTIVESGLDISNANTLIVERADVFGLSQLHQLRGRVGRGRDRAYAYFLYPPDKPLTETAHDRLATIAQHNDLGAGMAVAMKDLEIRGAGNLLGGEQSGHIASVGFDMYVRMVGEAVAEYR--PEVKVELPVDASLPHDYVPSERLRLDAYRRLAGAATDADIDEVRGELVDRFGPVPEPVENLLAVAGLRVLARRFGVTEIITAGRQ--IRFAP
>ACTINO135_GEBA2501553459 Caci_0188 transcription-repair coupling factor [Catenulispora acidiphila ID139908, DSM 44928]
AAPRSVRPFALAALAGPVLAVTATGREAEDLVAALRGLLDPETVVDFPSWETLPHERLSPRSDTVGRRLAVLRRLKVVVAPIRSVLQPQVK-GLADLVPVAARTGAEIDLDDLVNRLAAAAYTRTDLVDKRGEFAVRGGIVDVFPPTEEHPLRLEFWGDQIEEIRYFKVADQRSLEVAEGLWAPPCRELLLTDEGVEGMESLAPVLVLLIDLLPAGSPADVRARISEGWRVVLVTQGHGSADRLVEVLKGVATASIEHGFIAADLWVITEQDVSGQRRRNVIDPLQLKAGDPVVHEQHGVGRYVEMAQRTVAGATREYLVIEYAAGDRLFVPTDQLDQVTKYVG--GEAPSLHRLGGADWQKAKSRARKAVKQIAGDLVKLYSARMAAPGHAFAADTPWQRELEDAFPYVETPDQLACIDEVKSDMEKPVPMDRLICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHFSTFAERYAQFPVTLKGLSRFQTDKEAAEVLRGVADGSVDVVIGTHRLLANSVKFKRLGLVIVDEEQRFGVEHKEQLKQARANVDVLTMSATPIPRTLEMAVTGIREMSTIQTPPEERHPVLTFVGPYEERQISAAIRRELLREGQAFYIHNRVESIDRAASRLRALVPEARIATAHGQMNEHVLEKLIVDFWNKEYDVLVCTTIVESGIDITNANTLIVERADNFGLSQLHQLRGRVGRGRERAYSYFTYPPEKPLTETAHERLATIAQHTDLGAGMYVAMKDLEIRGAGNLLGGEQSGHIEGVGFDLYIRMVGEAVEEYRAQVEIRVDLPVDAHLPHDYIPGERLRLEAYKRIAGATTHEELAEVRQEFTDRYGRFPQPVENLLAVAAFRIDARAAGLTEVA--VQGNFVKFGP
>ACTINO135_YP_001825934-NC_010572 putative transcriptional-repair coupling factor {Streptomyces griseus subsp. griseus NBRC 13350} [Chromosome]
VGPPGARPFAVAALA-TVLAVTATGREAEDLAAALRTLLPPDTIAEYPSWETLPHERLSPRSDTVGRRLAVLRRLSVVVAPIRSVLQPQVK-GLGELEPVALAGGQSADLGEVVDALAAAAYSRVELVEKRGEFAVRGGILDVFPPTEEHPLRVEFWGDEVEEIRYFKIADQRSLEVAAGLWAPPCRELLLTDEAVEGMESLAPVLVLLLDVLPEDAMADTKGWLADGWRTVYVTEGQGLANRTVEVLSGVSCGAIEQGFVDPALAVLTETDLTGQRRRKTIDPLTLEVGDYIVHEQHGVGRYVEMVQRTVQGATREYLLVEYAPGDRLYIPTDQLEQVTKYVG--GEAPTLHRLGGADWTKTKQRAKKAVKEIAADLIKLYSARMAAPGHAFGADTPWQRELEDAFPYAETPDQLSTIAEVKEDMEKTVPMDRLICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHYGTFTERYSQFPVNVRALSRFQSETESRATLEGLRDGAVDLVIGTHRLFSSETKFKDLGLVIVDEEQRFGVEHKEQLKKLRANVDVLTMSATPIPRTLEMAVTGIREMSTITTPPEERHPVLTFVGPYEEKQIGAAVRRELLREGQVFYIHNRVESIDRAAARLREIVPEARIATAHGQMSEAALEQVVVDFWEKKFDVLVSTTIVESGIDISNANTLIVERGDNFGLSQLHQLRGRVGRGRDRGYAYFLYPPEKPLTETAHERLATIAQHTEMGAGMYVAMKDLEIRGAGNLLGGEQSGHIAGVGFDLYVRMVGEAVADYRAQLEVKIELPVDAHVPHDYAPGERLRLQAYRAIASASSEDDIRAVREELTDRYGPLPEPVENLLLVAGLRMLARACGVGEIV--LQGSNIRFAP
>ACTINO135_NP_824726-NC_003155 mfd transcriptional-repair coupling factor {Streptomyces avermitilis MA-4680} [Chromosome ]
VGPPAARPFTVAALA-TVLAVTATGREAEDLAAALRSLLPPDRVVEYPSWETLPHERLSPRSDTVGRRLAVLRRLSVVVAPIRSVLQPQVK-GLGDLEPVALRTGQTADLGTIVEALSAAAYARVELVEKRGEFAVRGGILDVFPPTEEHPLRVEFWGDDVEEIRYFKVADQRSLEVAEGLWAPPCRELLLTDDAVEGMESLAPVLVLLIDVLPKGSMADTKGWLADGWRTVYVTEGHGPAARTVEVLGGVACGSIDYGFVDPRLAVLTETDLSGQRRRKTIDPLTLEAGDYIVHEQHGVGRYIEMVQRTVQGATREYLVVEYAPGDRLYIPTDQLEQITKYVG--GEAPTLHRLGGADWTKTKARAKKAVKEIAADLIKLYSARMAAPGHAFGSDTPWQRELEDAFPYAETPDQLTTIAEVKEDMEKTVPMDRLICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHFGTFGDRYSQFPVNVRALSRFQTDTEAKATLEGLREGSVDVVIGTHRLFSSETKFKDLGLVIVDEEQRFGVEHKEQLKKLRANVDVLTMSATPIPRTLEMAVTGIREMSTITTPPEERHPVLTFVGPYEERQIGAAIRRELLREGQVFYIHNRVESIDRAAARLREIVPEARIATAHGQMSEQTLEQVVVDFWEKKYDVLVSTTIVESGIDISNANTLIVERGDNFGLSQLHQLRGRVGRGRERGYAYFLYPPEKPLTETAHERLATIAQHTEMGAGMYVAMKDLEIRGAGNLLGGEQSGHIAGVGFDLYVRMVGEAVADYRASLEVKIELPVDAHVPHDYAPGERLRLQAYRAIASVNTEEDIKSVREELVDRYGKLPEPVENLLLVAGLRMHARACGVGEIVLQGNN--IRFAP
>ACTINO135_NP_627327-NC_003888 transcriptional-repair coupling factor {Streptomyces coelicolor A3(2)} [Chromosome ]
VGPPAARPFAIAALA-PVLAVTATGREAEDLAAALRSLLPPEGIVEYPSWETLPHERLSPRSDTVGRRLAVLRRLSVVVAPVRSVLQPQVK-GLGDLEPVALRTGQGADLEEIVQALAAAAYARVELVEKRGEFAVRGGILDVFPPTEEHPLRVEFWGDDVEEIRYFKVADQRSLEVAEGLWAPPCRELLLTDDAVEGMESLAPVLVLLLDVLPKGSMADTKGWLAEGWRAVYLTEGHGPASRTVEVLGGVSCGSIDHGFVDPALAVLTETDLTGQRRRKTIDPLTLETGDYIVHEQHGVGRYIEMVQRTVQGATREYLVVEYAPGDRLYIPTDQLEQITKYVG--GEAPTLHRLGGADWTKTKARAKKAVKEIAADLIKLYSARMAAPGHAFGSDTPWQRELEDAFPYVETPDQLTTIAEVKDDMEKTVPMDRLICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLVQQHFGTFSERYAQFPVSVKALSRFQSDTESKATLEGLREGSVDIVIGTHRLFSSETKFKDLGLVIVDEEQRFGVEHKEQLKKLRANVDVLTMSATPIPRTLEMAVTGIREMSTITTPPEERHPVLTFVGPYEHRQIGAAIRRELLREGQVFYIHNRVESIDRAAAKLREIVPEARIATAHGQMSEQALEQVVVDFWEKKFDVLVSTTIVESGIDISNANTLIVERGDNFGLSQLHQLRGRVGRGRERGYAYFLYPPEKPLTETAHERLATIAQHTEMGAGMYVAMKDLEIRGAGNLLGGEQSGHIAGVGFDLYVRMVGEAVADYRASLEVKIELPVDAHVPHDYAPGERLRLQAYRSIASANSEEDVKAVREELVDRYGKLPEPVENLLLVAGLRMLARACAVGEIVLQGNN--IRFAP
>CHLOFL30_P641279798 YP_001545422 Haur_2656 transcription-repair coupling factor [Herpetosiphon aurantiacus ATCC 23779]
PVPSAARRV-VAAIATSSLLIAATPDAAVRMHADLTAWL-GENVMLFPPTDTLPYEHMSADIGIVAQRLAVLGRLICVVASVKALMQPTMTPEEFQFATRLLRQGDQHDPRKLLAHWVSLGYRVGPTAEQPGDLSQRGGIIDIFPPTSDRPIRLEFWDDQLESLRIYDPISQRSDKRVRQIQISPAHEIPFRTERFEGRAFYAPFFRGLWQHLPAS--EDLRERLVGGERVVLISPQASRLRELASQ---IRHGNLSGGFSSDPLTILSDSEIFGWESDRTAFLQSLKVGDYVVHIEHGIAQYEGLSRIEASGAEREFLVLRYASGDKLYVPVDQVDRVSRYIGAGEGKPTLTRLGTSDWERAKRKVRADVEELATELLDLYAARQLVEGFAYSSDTSWQRELEDSFPYTETDDQLRAIEEVKSDMENTRPMDRLICGDVGFGKTEVALRAAFKAVQDGRQVAVLVPTTVLAQQHFETFSRRMQMFPVRIEMLSRFRSASQQKSITERIVKGEIDIVVGTHRILSSDIHFKQLGLVIIDEEQRFGVKDKERLKKLRHEIDVLTLTATPIPRTMHMALSGIRDLSVIDTPPDDRMPIKTYVQPYNEMLVRDAILRELGRNGQAYFVHNRVQSIYTVANRLQKLVPEARIGVGHGQMPEKALEKVILQFFEGLFDVFVCTTIIESGIDVPSANTMIIDDATTYGLAQLYQLRGRVGRSTQRGYAYMFYNPTKAMGEEAQKRLEAIQEATELGAGFRIAMRDLEIRGTGNLLGAEQSGNITTIGFDLYSRLLSQAVEERKRGAMVSIDLPINAYLPQNYVDDEPLRLRVYQHIAEARSTRDIRMLRQELEDRFGPVPEPAARLLDLLTIKVLALQAGVISII-SDDNEITRLPK
>CHLOFL30_P643568548 YP_002465013 Cagg_3741 transcription-repair coupling factor [Chloroflexus aggregans DSM 9485]
PVPTAARPALIAALARPVVYVTLSAESARRAVDDLCQWLSPDRVWLFPAADALPYEHMSAGSDVIARRLAVLRGLGVIVTPVKALMQPTMPPSELATATIRLRRGMQMPIDQLLHRLLASGYQRAAMVETPGEVSRRGAILDVWSSGDELPLRIEWFDDEIDSLRRFEPATQRSEQRLEQAEIGPPHEIPLREERFEGRAFYAPFFFTMLDYLPAG--GQMRRLQVQAGEMVVAVTAQAAR--LQELLGEAILGGLEAGFTVPDLTLLTDSEIFGIVADRTAFLRSLKPGDYVVHIEHGIAVFDGMIRRTV-GVEREYLVLRYAGEDKIYVPVDQIDRVTRYIGAGDGPPTLTRLGTQDWERTKRKVRAAVQELAEELLHLYAQRQLKPGFAFSPDNEWQRELEASFPYLETDDQLRAIAEVKADMERPIPMDRLVCGDVGFGKTEVALRAAFKAVQDGKQVAILVPTTVLAQQHFDTFRKRMAAFPVTVEMLSRFRSPKEQDGIVRDLARGKIDIIIGTHRLLSNDVVFRDLGLVIVDEEQRFGVRHKERLKQLRAEVDVLTLTATPIPRTLHMALSGIRDLSVINTPPEDRLPIKTYVVPADDHLIQEVIRRELEREGQVYFVHNRVQSIYHVAERLRRLVPEARIAVGHGQLAERNLERVMMDFFEGRYDVLVCTTIIESGLDVPNANTIIIDDATHYGLAQLYQLRGRVGRGATRAYAYLLYNPAAPMTSDARQRLEAIQEATELGAGFRVAMRDLEIRGAGNLLGSEQSGHIAAVGFDLYSRLLEQAVQQLKTDPLVTIDLPLTAYLPPTYIADETVRLAVYQRMIDADTIEEVRSLRQELIDRFGPLPEPVLHLILWLQIRFLALQAGVASITTEGDVFLIRLMT
>CHLOFL30_P641373778 YP_001636684 Caur_3096 transcription-repair coupling factor [Chloroflexus aurantiacus J-10-fl]
PVPAAARPALLAALAYPTLYITLSAESALRAADDLRQWLGSDQVWLFPPADALPYEQMSPGRDVLARRLAVLRGLGVIVTSVKALMQPTLPPSDLANATIRLQRGMQVSIEETVVTLLDNGYQRVAMVEEPGELSRRGAILDVWPPGDELPLRIEWFDDEIDSLRRFDPATQRSEQRLERADIGPPHEIPFWRRRFEGRAFYAPFFYTLLDYLPPQSMDTVVEQVRGGELVVAVTAQAARLQELVGERLAPIHGGLEAGFTLADLTLLTDSEIFGVTTDRAAFLRTLKPGDYVVHIEHGIAIFDGMIRRTVSEVEREYLVLRYAGEDKIYVPVDQIDRVTRYIGAGDGPPTLTRLGTQDWERTKRKVRAAVQDLAEELLRLYAQRQLKSGYAFSPDNEWQRELEASFPYLETDDQLRAIAEVKADMEKPTPMDRLVCGDVGFGKTEVALRAAFKAVQDGKQVAILVPTTVLAQQHFDTFRKRMAAFPVTVEMLSRFRSPKEQDAIIRDLARGKIDIIIGTHRLLSNDVVFRNLGLVIIDEEQRFGVRHKERLKLMRTEVDVLTLTATPIPRTLHMALAGIRDLSVIDTPPEDRIPIKTYVVPTDDHLIQEVIRRELEREGQVYVVHNRVQSIYHVAERLRRLVPEARIAVGHGQLAERELEQVMIDFFEGRYDVLVCTTIIESGLDVPNANTIIIDDATNYGLAQLYQLRGRVGRGATRAYAYLLYNAARVMTNDARLRLEAIQEATELGAGFRIAMRDLEIRGAGNLLGAEQSGHIAAVGFDLYSRLLEQAVRKLKEAPLVTIDLPLTAYLPPDYISDETVRLAVYQRMVDATTLDEVRGLRQELIDRFGPLPEPVLHLILWLQIRLLALQAGVASITTEGDVFFIRLS-
>CHLOFL30_P643713521 YP_002571047 Chy400_3344 transcription-repair coupling factor [Chloroflexus sp. Y-400-fl]
PVPAAARPALLAALAYPTLYITLSAESALRAADDLRQWLGSDQVWLFPPADALPYEQMSPGRDVLARRLAVLRGLGVIVTSVKALMQPTLPPSDLANATIRLQRGMQVSIEETVVTLLDNGYQRVAMVEEPGELSRRGAILDVWPPGDELPLRIEWFDDEIDSLRRFDPATQRSEQRLERADIGPPHEIPFRDERFEGRAFYAPFFYTLLDYLPPQSMGQLRRLVERGGELVVAVTAQAAR--LQELVGEPIHGGLEAGFTLADLTLLTDSEIFGVTTDRAAFLRTLKPGDYVVHIEHGIAIFDGMIRRTV-SVEREYLVLRYAGEDKIYVPVDQIDRVTRYIGAGDGPPTLTRLGTQDWERTKRKVRAAVQDLAEELLRLYAQRQLKSGYAFSPDNEWQRELEASFPYLETDDQLRAIAEVKADMEKPTPMDRLVCGDVGFGKTEVALRAAFKAVQDGKQVAILVPTTVLAQQHFDTFRKRMAAFPVTVEMLSRFRSPKEQDAIIRDLARGKIDIIIGTHRLLSNDVVFRNLGLVIIDEEQRFGVRHKERLKLMRTEVDVLTLTATPIPRTLHMALAGIRDLSVIDTPPEDRIPIKTYVVPTDDHLIQEVIRRELEREGQVYVVHNRVQSIYHVAERLRRLVPEARIAVGHGQLAERELEQVMIDFFEGRYDVLVCTTIIESGLDVPNANTIIIDDATNYGLAQLYQLRGRVGRGATRAYAYLLYNAARVMTNDARLRLEAIQEATELGAGFRIAMRDLEIRGAGNLLGAEQSGHIAAVGFDLYSRLLEQAVRKLKQDPLVTIDLPLTAYLPPDYISDETVRLAVYQRMVDATTLDEVRGLRQELIDRFGPLPEPVLHLILWLQIRLLALQAGVASITTEGDVFFIRLST
>CHLOFL30_P640893616 YP_001431590 Rcas_1478 transcription-repair coupling factor [Roseiflexus castenholzii DSM 13941]
PAPGAARTPLVAAVAVPMVYVVSTTDAALRAYDDLRQWLGDDRVVIFPAGDALPYEHMSTGSDVLAARMRVLRRLSVIVAPVKALMQPTLTPDELRTGSIRLERGVPCLLDDLMERLIDLGYRYAPTVEEPGEVNRRGGIIDVFPPGDDLPLRIEFFGDEIDSLRRFDPLTQRSEAQISAAIIDPPHEFPLWQRRFEGRALFAPFFRTLLRHLPSGAIEDIVERLHAGERVIVVTPQAARLQELVAEGMQAIHGSLDAGFRLPALTLFSDSEIFGWVEDRAAFLRGLKPGDYVVHIEHGIAVYEGLVRRSVGGVARDYLNLRYAEGDRLYVPVDQIDRVSRYIGAGDAEPQLTRLGTQDWERAKRKARAAVQDLADELIGLYAQRQLAEGHAFSPDTEWQRELEASFPYVETPDQLKAIIDVKRDMEQPQPMDRLICGDVGFGKTEVALRAAFKAVQDGKQVAVLAPTTVLVQQHYDTFSRRMAAFPVRVEMISRFRSAKEQSDIVRRLARGEIDVIIGTHRLLSKDVVFKDLGLLVVDEEQRFGVRHKERIKQLRTNVDVITLTATPIPRTLHMALAGIRDLSVIDTPPEDRIPIKTYVLPYDENLIREAILRELDRGGQVYFVHNRVQSIYYVADRLRQLVPEARIAVGHGQLDERQLERVMLDFFTGRDDVLVCTTIIESGLDVPNANTIIIDDATHFGLAQLYQLRGRVGRGTQRAYAYLFYRSERPSTPEAQERLQAIQEATELGAGFRIAMRDLEIRGAGNLLGAEQSGHIAAVGFDLYSRLLEQAVRRLTGAPLVTLDLPLDAYLPVDYIPDDQVRLAAYQRMAEAQTPEAVHDLRQELRDRFGELPEPAEQLLIWLRIKALALAAGVTSVVTTDEEFIVRLPE
>CHLOFL30_P640597253 YP_001277965 RoseRS_3660 transcription-repair coupling factor [Roseiflexus sp. RS-1]
PTPGAARTPLVAAFTLPLLYLVGTTDAALRAHEDLRQWIGTDRVFLFPASDALPYEHMSTGADILTARLRVLHRLFVIVAPVKALMQPSLTPDELRDASVRLERGMAYALDDLIERLIAMGYRYAPTVEEPGEVNRRGGIIDVFSPGDDLPLRIEFFGDEIDSLRRFDPLTQRSEAQIRAAIIGPPHEFPLWRRRFEGRALFAPFFRTLLHHLPPGAPDDVVERLRAGERVVLITPQAARLQELVTEALQVLHGTLDEGFRMPALTLYSDTEIFGWAEDRAAFLRGLKPGDYVVHIEHGIAVYEGLIRRSVGGIERDYLNLRYAEGDRLYVPVDQIDRVSRYIGAGDVEPQLTRLGTQDWERAKRKARAAVQDLAEELITLYAQRQLAEGHAFSPDTEWQRELEASFPYVETPDQLKAIIDVKRDMEQPQPMDRLVCGDVGFGKTEVALRAAFKAVQDGKQVAVLAPTTVLVQQHYDTFSRRMAAFPVRIDMISRFRSAKEQSEIVQRLARGEIDIIIGTHRLLSKDVVFKDLGLLVIDEEQRFGVRHKERIKQLRTNVDVLTLTATPIPRTLHMALAGIRDLSIIDTPPEDRIPIKTYVLPYDERLIREAILRELDRGGQVYFVHNRVQSIYYVADRLRRLVPEARIAVGHGQLEEHQLERVMLDFFTGRDDVLVCTTIIESGLDVPNANTIIIDDATNFGLAQLYQLRGRVGRSTQRAYAYLFYKSERPSTPEAQERLRAIQEATELGAGFRIAMRDLEIRGAGNLLGAEQSGHIAAVGFDLYSRLLEQAVRTLKQPPLVTLDLPLDAYLPVDYIPDDRVRLAVYQRMAEAQTPEAVRDLRQELRDRFGELPEPADQLLIWLRIKALALAAGVTSVVTTDAEFIIRLPE
>DELTA20_P637527531 YP_064018 DP0282 similar to transcription-repair coupling factor [Desulfotalea psychrophila LSv54]
GLRGSSTALLAAQLA-SCCCIVPDDHLIPIVVQNLQLFSEKT-ILSYPSHEIPPYTALSPDQKVTATRLASLYQATIIVTSIEALLRRVIPKELLSARVELIMAGEDCDRDGLITSLLLLGYDKVSLTKNVGDFAVRGGIIDIYPPAHEGPLRLDFFGDTVESLRTFDPVSQRSTGKLEEAILLPTRDFIIDTSGIAGIESFLPLFFSLFDFLTEDTMERIRQWQEEGHRIVICCRSEKHTKNLAEMLERLCDHPLSEGFSLPEWDIISESELFGQKWAEPIEFTELNEGDIVVHRDHGLGIYRGLNAIRIQEITNDFMSIEYRDDDKLYVPVDRLNLVSRYQGISDREPRIDKLGSQNWRNTTKKVKEEVWKVAHELLEIYAKRELKAGRAFAPPGQLYQELEESFPFDETAGQLAAINSVLDDLTDANPMDRLVCGDVGYGKTEVAIRGAFKVVEDGAQAAILVPTTVLAEQHLKTFRERLQNFPLRIECLNRFRTAKEQREIVKDLAAGKIDIVIGTHRLLSKDVQFKDLGLLIIDEEHRFGVAHKERLRKMRAEVDILTLTATPIPRTLQMSLLSIRDLSVISSPPEQRRPVKTFVAEDDDLVIKEAISRELRRKGQTFFVHNRVKSIYQIANKIEKLVPDARIAVAHGQMDTKELENIMVSFVNKEVDVLVATTIIESGLDIPSANTMIINRADNLGLAEMYQLRGRVGRSSTQSFAYLLVPSLDSISKDSRERLRALMECNELGGGFKLAMNDLQIRGGGNLLGISQSGNIAAIGYDLYLDLLQKTVADLKAQLDPEINLQHSAFIPSNYITDIDQRYIVYRRIAAMSRMADFADIRDELSDRYGRIPAETETLLKMIEVKRELIELRVTKLERGRGNIVLTFQD
>SPIRO157_P643737814 YP_002721193 BHWA1_01006 transcription-repair coupling factor [Brachyspira hyodysenteriae WA1, ATCC 49526]
GLKGGSDSLFFSSLF-SILIIKENESDAMLLSQSLNFYNIPN--YYFPDYDTVPFTKMSPVSDIAQDRINILYKL-IIITTVNAVTRKLPNRDDLKKLPIHLNVGDKLDLDNLRLTLYDLGYVIEREVAEKGTASVRGSIVDVFSVEYNNPIRIELFDDEIESIRLFNIEDGRSFKSVENIIIYPVRETIYSDSYFAGSENLLPIFYTIFDYFDY-GYDYVKEYREKDYLIILSTGHNDQALRFYKIMQDIITAQSSSGFIKDDTIFIADWEVFGRNKNLIETFVDLNVGDYAVHVNYGIGKYLGLTRKMSNGKEKDYITLEYAKGDKLYIPVEQMNFVQKYISGHGEAPKLTQLGGSAWDKIKSKAREDALATARELIKLYAIRSNIRGNVYGPDTQWQDDFEASFRYEETVDQLRAINDIKEDMESGKMMDRLVCGDVGFGKTEVAFRAVFKAIMAGKQCAILCPTTILSQQHYNNAKKRFEDFPIKIEVLNRFVTSKQAKRNKELLKEGSCDLIVGTHMLLSKDIEFKNLGLIVIDEEQRFGVKHKEALKKLRLETDVLTLSATPIPRTLNMALTGIRDISIIETPPLNRIPVKTFVTEFSEDAVVNAIERELKREGQVFYLYNRIDTIESFALMIKKLCPKARICVAHGRMTGHQLEKIMGDFINHKYDILVSTTIIENGIDIPNANTILIDNANKLGLSELYQLRGRVGRSDREAYAYMFYPSDLALTEVAYKRLEAISEHTDLGAGFKIAMRDLEIRGAGNILGKEQSGMIYQVGYELYTQMLEEAANEYKGEFDTVIDLKHNLFIPDSYIADSKEKISAYKLIMRSQRDEDIEYSKEFMIDKYGKLPKELEDIFDIAKVKIILKRMRILSVIEGHYNIYLKLDK
>SPIRO157_P642686796 YP_001962855 LBF_1770 Transcription-repair coupling factor [Leptospira biflexa Patoc 1 (Ames)]
GIPESAHSFVTSTLYKTFVVVLPTNQEAESFCRELLSFLNKEEIYFFPGPENIPYEYTKWQVEWKRDRILTINQISLVVTSVAAFLRKLPEKESLKGKSITLKLGVDFPLEALLVELIQLGYHREEVCEQFGHFSLKGGILDIYTPYLTNPVRIDFFGDTVDEIRTFDPNTQKSIQKIDEVLITAANETIVTKSEIEIIEEHLPLVRGFLDFFPEP--REAKEYLNPGHSIFITSSFSAQMMRLKGLFSELILSDLKRGFHLEGIFVFTDNDLFGRSSQMIESFIDLKEGDYVVHVNHGVGRFVKIERTKADGKERDFLKLEYAGGDSLFVPLDQISLVQKYIG--GTDPKLDTLGKNSWKKAKERVQESVDKLAEELVLLYSNRLKLNGFAFPPDTIWQEEFEAAFEFEETPDQISAIEAVKLDLESSRPMDRLVCGDVGYGKTEVAIRAAFKVIMAGKQVMLLTPTTILSLQHFNTFKQRYENYPIKIAFVSRFRSPAEIREDLKNFTEGKIDMLIGTHAILSSKVKPKNLGLLIIDEEQKFGVTHKESIKKFKNLVDVLTLTATPIPRTLHMALTGIRELSIISTAPKNRQSVETYVLEEDDTLIQEAIRKEIERGGQVFYLYNRVESIEEEASYVRSLVPEVSVGILHGQLTEDEIEETLVEFYERKYDILVTTTIIESGIDMPNVNTLIVKKADMFGLSQLYQIRGRVGRSDRKAYAYMFYPSKKLMTELAEKRLNTIFEYQELGSGFKVAMRDLEIRGAGNLLGKEQSGDIMEVGFDLYVKMLEESISRIK-GVRTAVNLKTNFYLPDDYIPDTKQKIEFYKRFEGSANLDEIEELALEMEDRFGELPQIANTFVELEKIRTLASNLGFEFVTEKPEEILFKCGT
>SPIRO157_P642581979 YP_001839205 LEPBI_I1823 transcription-repair coupling factor [Leptospira biflexa Patoc 1 (Paris)]
GIPESAHSFVTSTLYKTFVVVLPTNQEAESFCRELLSFLNKEEIYFFPGPENIPYEYTKWQVEWKRDRILTINQISLVVTSVAAFLRKLPEKESLKGKSITLKLGVDFPLEALLVELIQLGYHREEVCEQFGHFSLKGGILDIYTPYLTNPVRIDFFGDTVDEIRTFDPNTQKSIQKIDEVLITAANETIVTKSEIEIIEEHLPLVRGFLDFFPEP--REAKEYLNPGHSIFITSSFSAQMMRLKGLFSELILSDLKRGFHLEGIFVFTDNDLFGRSSQMIESFIDLKEGDYVVHVNHGVGRFVKIERTKADGKERDFLKLEYAGGDSLFVPLDQISLVQKYIG--GTDPKLDTLGKNSWKKAKERVQESVDKLAEELVLLYSNRLKLNGFAFPPDTIWQEEFEAAFEFEETPDQISAIEAVKLDLESSRPMDRLVCGDVGYGKTEVAIRAAFKVIMAGKQVMLLTPTTILSLQHFNTFKQRYENYPIKIAFVSRFRSPAEIREDLKNFTEGKIDMLIGTHAILSSKVKPKNLGLLIIDEEQKFGVTHKESIKKFKNLVDVLTLTATPIPRTLHMALTGIRELSIISTAPKNRQSVETYVLEEDDTLIQEAIRKEIERGGQVFYLYNRVESIEEEASYVRSLVPEVSVGILHGQLTEDEIEETLVEFYERKYDILVTTTIIESGIDMPNVNTLIVKKADMFGLSQLYQIRGRVGRSDRKAYAYMFYPSKKLMTELAEKRLNTIFEYQELGSGFKVAMRDLEIRGAGNLLGKEQSGDIMEVGFDLYVKMLEESISRIK-GVRTAVNLKTNFYLPDDYIPDTKQKIEFYKRFEGSANLDEIEELALEMEDRFGELPQIANTFVELEKIRTLASNLGFEFVTEKPEEILFKCGT
>SPIRO157_P639659111 YP_800979 LBJ_1666 Transcription-repair coupling factor [Leptospira borgpetersenii sv Hardjo-bovis JB197]
SVTEGSHSILASSLFQTIVVVSENNTAAEFLFREALSFISASDLVYLPGQEVLPYEYLRYPSEMKRERIKAIGKI-LIFTSVAGFLKTLPPVQTMQGRAITLEKGKEIDLESLLIQLIDLGYKRTDVCETFGEFSLKGGILDIYSSYSQEPVRIDLFGEEIESIRTFDPDTQRSMVDLNRAVLLPVDEYILSDEYGIYYEELVPLVRGILSYFSEPPIEKISEL-EGGWKIVLTSSFEAQTKRLQGLFEKLVLSELRNGFIFENILILSENDIFGRNSKALQSFIDLKEGDPVVHIHHGVGRFLKIERTNAGGKERDFLKLEYAGGDSLFVPLDQISLIQRYIG--GTEPRLDSLGKNTWKKTKDRVQKAVETLAEDLVQMYSNRLKLQGYAFPPDTIYQEEFEAEFEYEETPDQIEAIEAVKKDLESSVPMDRLVCGDVGYGKTEVAIRAAFKVAMAGRQIMMLAPTTILALQHYNTFKNRFRNYPLRVELVSRFKTSAEIREILSDFSLGKIDMIIGTHAILSSKLKPKNLGLLIIDEEQRFGVNHKEAIKRFKNLVDVLTLTATPIPRTLHMALTGIRELSIIATPPKNRQSVETYVLEEDEDLIAEAIRNEIQRDGQVFYLYNRVETIEQETKYLGEIVPEVSIGILHGQMTEDEIEETLLDFYNRKYDILVTTTIIESGIDMPNVNTLFVKRADLFGLSQLYQIRGRVGRSDRKAFAYLLLPKDRVVTEQAEKRLNTIYEYQELGSGFKVAMRDLEIRGAGNLLGKEQSGDIMEVGFDLYVRMLEEAIARIK-GVRTSVTLNTNFFIPETYISDTRQKIEFYKKFEGARDLQEIDEVYREMVERFGDPPEDARTFILLEKIRTLASNLGFESVTETKDEIKLKSGS
>SPIRO157_P639656357 YP_798253 LBL_1885 Transcription-repair coupling factor [Leptospira borgpetersenii sv Hardjo-bovis L550]
SVTEGSHSILASSLFQTIVVVSENNTAAEFLFREALSFISASDLVYLPGQEVLPYEYLRYPSEMKRERIKAIGKI-LIFTSVAGFLKTLPPVQTMQGRAITLEKGKEIDLESLLIQLIDLGYKRTDVCETFGEFSLKGGILDIYSSYSQEPVRIDLFGEEIESIRTFDPDTQRSMVDLNRAVLLPVDEYILSDEYGIYYEELVPLVRGILSYFSEPPIEKISEL-EGGWKIVLTSSFEAQTKRLQGLFEKLVLSELRNGFIFENILILSENDIFGRNSKALQSFIDLKEGDPVVHIHHGVGRFLKIERTNAGGKERDFLKLEYAGGDSLFVPLDQISLIQRYIG--GTEPRLDSLGKNTWKKTKDRVQKAVETLAEDLVQMYSNRLKLQGYAFPPDTIYQEEFEAEFEYEETPDQIEAIEAVKKDLESSVPMDRLVCGDVGYGKTEVAIRAAFKVAMAGRQIMMLAPTTILALQHYNTFKNRFRNYPLRVELVSRFKTSAEIREILSDFSLGKIDMIIGTHAILSSKLKPKNLGLLIIDEEQRFGVNHKEAIKRFKNLVDVLTLTATPIPRTLHMALTGIRELSIIATPPKNRQSVETYVLEEDEDLIAEAIRNEIQRDGQVFYLYNRVETIEQETKYLGEIVPEVSIGILHGQMTEDEIEETLLDFYNRKYDILVTTTIIESGIDMPNVNTLFVKRADLFGLSQLYQIRGRVGRSDRKAFAYLLLPKDRVVTEQAEKRLNTIYEYQELGSGFKVAMRDLEIRGAGNLLGKEQSGDIMEVGFDLYVRMLEEAIARIK-GVRTSVTLNTNFFIPETYISDTRQKIEFYKKFEGARDLQEIDEVYREMVERFGDPPEDARTFILLEKIRTLASNLGFESVTETKDEIKLKSGS
>SPIRO157_P637496361 YP_001416 LIC11455 transcription-repair coupling factor [Leptospira interrogans sv Copenhageni Fiocruz L1-130]
SVTTGSHSILASSLFQTILVVSENNTSAEFLFREALSFLPSNDLIYLPGQEVLPYEYMRYPSEMKRERIKAIAKI-LIFTSVSGFLKTLPPIQTMQGRAIVLKKGKEIDLESLLIQLIDLGYKRVQVCETFGEFSLKGGILDIFSSYSTEPVRIDLFGEEIESIRTFDPDSQRSMTDLDQAVLLPADEYILSEEYGIYYEELIPLVRGILSYFSKPPIEKISEL-KGGWKIVLTSSFEAQTKRLQGLFEKLVLSELRNGFILENILILSENDIFGRNSKALQSFIDLKEGDYVVHIHHGVGKFLKIERTSAGGKERDFLKLEYSGGDSLFVPLDQISLVQRYIG--GTEPRLDSLGKSTWKKTKDRVQKAVEALAEDLVQMYSNRLKLQGYAFPPDTIYQEEFEAEFEYEETPDQIEAIEAVKKDLESSRPMDRLVCGDVGYGKTEVAIRAAFKVAMAGRQIMMLAPTTILALQHYNTFKNRFENYPVRVELVSRFKTPAEIRDILADFSAGKVDMVVGTHAILSSKLKPKNLGLLIIDEEQRFGVNHKETIKKFKNLVDVLTLTATPIPRTLHMALTGIRELSIIATPPKNRQSVETYVLEEDDDLISDAIRNEIQRGGQVFYLYNRVETIEEETNYLSKLVPEVSIGILHGQMTEDEIEETLLDFYNRKYDILVTTTIIESGIDMPNVNTLFVKRADLFGLSQLYQIRGRVGRSDRKAFAYMLLPKDRVVTEQAEKRLNTIFEYQELGSGFKVAMRDLEIRGAGNLLGKEQSGDIMEVGFDLYVRMLEDAIARIK-GVRTSVTLNTNFFIPETYISDTRQKIEFYKKLEGARDLDEIEEIYSEMLDRFGEPPEDAKTFILLEKIRTLASNLGFEFVTEMKDEIKMKSGS
>SPIRO157_P637339126 NP_712694 LA2513 transcription-repair coupling factor [Leptospira interrogans sv Lai 56601]
SVTTGSHSILASSLFQTILVVSENNTSAEFLFREALSFLPSNDLIYLPGQEVLPYEYMRYPSEMKRERIKAIAKI-LIFTSVSGFLKTLPPIQTMQGRAIVLKKGKEIDLESLLIQLIDLGYKRVQVCETFGEFSLKGGILDIFSSYSTEPVRIDLFGEEIESIRTFDPDSQRSMTDLDQAVLLPADEYILSEEYGIYYEELIPLVRGILSYFSEPPIEKISEL-KGGWKIVLTSSFEAQTKRLQGLFEKLVLSELRNGFILENILILSENDIFGRNSKALQSFIDLKEGDYVVHIHHGVGKFLKIERTSAGGKERDFLKLEYSGGDSLFVPLDQISLVQRYIG--GTEPRLDSLGKSTWKKTKDRVQKAVEALAEDLVQMYSNRLKLQGYAFPPDTIYQEEFEAEFEYEETPDQIEAIEAVKKDLESSRPMDRLVCGDVGYGKTEVAIRAAFKVAMAGRQIMMLAPTTILALQHYNTFKNRFENYPVRVELVSRFKTPAEIRDILADFSAGKVDMVVGTHAILSSKLKPKNLGLLIIDEEQRFGVNHKETIKKFKNLVDVLTLTATPIPRTLHMALTGIRELSIIATPPKNRQSVETYVLEEDDDLISDAIRNEIQRGGQVFYLYNRVETIEEETNYLSKLVPEVSIGILHGQMTEDEIEETLLDFYNRKYDILVTTTIIESGIDMPNVNTLFVKRADLFGLSQLYQIRGRVGRSDRKAFAYMLLPKDRVVTEQAEKRLNTIFEYQELGSGFKVAMRDLEIRGAGNLLGKEQSGDIMEVGFDLYVRMLEDAIARIK-GVRTSVTLNTNFFIPETYISDTRQKIEFYKKLEGARDLDEIEEIYSEMLDRFGEPPEDAKTFILLEKIRTLASNLGFEFVTEMKDEIKMKSGS
>DELTA20_P643533223 YP_002429228 Dalk_0050 transcription-repair coupling factor [Desulfatibacillum alkenivorans AK-01]
GLERSSQAYFIAQLFRTVLVLAPTKKEAKTLCADLDFFLQPEWILEFPAYHILPFKGISYHTETAANRISALSRMAIVVTTPQAMASRLIPKSALNSFGELIMAGEELDRDAFVEKLVSGGYVKNLIVEEPGDFCVRGSIVDVYGPPYSQPLRIEFFGDEVDSIRFFSPSTQRTIKKMEEAVILPATEAVVSKDQFPGIEGFVPLLYSLFDYLPADTLKPLADWRDQGYSIVMACGSKMQAERLESLLTPVVLGSLSSGFVWPALAVVTETEIFGPPRTELLDLAQLSQGDFVVHVDHGIAQYGGLVKMDLGGVANDFLLLEYRDGDKLYLPVDKSNLIQKYRTMGETAPALEKLGGKAWEKVKSRVKKSVEKIAGELLKLYAVRKVKQGYAFSPTDSYFAEFEANFEYEETPDQAKAINDVLADMENRRPMDRLICGDVGYGKTEVALRASFKAVSDSKQTAFVTPTTILSEQHYRTFLKRYEGYPVKIACLNRFRKAAEKKEILKGLENGDIDIVIGTHSVLQKSVQFKDLRLVIIDEEQRFGVKHKETLKKIRATVDVLALTATPIPRTLHMSMVGIRDITVINTPPEQRRPITTYVSKFDEVIAAEAIRAELARKGQVFFVHNRVQSIDAMAGRLKRLVPEARVGVAHGQMSETMLEKVMIKFVNHEIDLLVCTAIIESGLDIPAANTILINRADMFGLAQIYQLRGRVGRGDDQAYAYLFIPDESVLTRDAQRRLKVLMEHSDLGAGFAIAMSDLQIRGGGTILGSAQSGQIAAVGYEMYLQLMETAIGQLKGELDPEINVDFSAFIPEWYIPDVDQRLLAYRRLSRMEKVSDVGAFSKEMQDRFGKVPQETNQLFFKIMFKILCRDAGVKKMDMAGKNLHLVISP
>CHLAM447_P637502442 YP_008520 pc1521 probable transcription-repair coupling factor mfd [Candidatus Protochlamydia amoebophila UWE25]
ELWNAPKALIAALAQQHVLILTGSSQEEARLFHDLSFFTNCP-TVDFPSWETLPSENVPPSPDIVGERYQLLKKIHIILTSLQACLQKLIAPSAFQKLYLTLKANESFFFDDLIQKLNLMGYQRKFIASDKGEFAVRGGIIDVFPVSSPDPYRLEFWGDDLESIRIYDPIGQISVRAVEQIDIAPGLELELLNQ------------SSFLDYLGPETLYRLPSLSHETFRLDLLCASELEENNLRQKLLSYQIGYLSSGLVIQDWMILPLTELTHRHTSPAETY-DLTPGEVIVHLNNGIGRYLGIEKRANHGILSEFFTIEYADQAKLYVPFNQAHLITKYLGSNEVIPKLHTIGSSKWKKTKEHTERAILGYASDLLKSYAEREIKEGFAYPIDSADLQSFEGEFPFSETEDQLAAISSIKQDMMSKKAMDRLICGDVGYGKTEVAMRAAFKAVTDGKQVAVLVPTTVLAMQHFDNFLDRMANFPINIGILSRFRTQKQIQETLEGIANGFIDIVIGTHRIIGEDVKFKDLGLVIIDEEQRFGVKAKEHLKKIKIGVDCLTLSATPIPRTLYMSLIGARDMSVINTPPQDRLPTKTIITEPSDQIIQNALLRELSRDGQAFVIHNRVESIYSVSNRIKSLLPQARVLVAHGQMHADEIDATFHAFKSGQADILVATTIVENGVDIPNANTILIDRADHFGLAALYQLRGRVGRWNRRAYAYFLVPNLRVMPELTRKRLQALSEASGYGSGMKVAMRDLEIRGAGDILGLEQSGHVSSIGFHLYCKMLKRTIQTL-QGTETKIELAIDARLPEDYVNEVSLRMEVYQRLGEAFSLEEVDSIWSEIRDRFGPPPEPAQWLYHLTRIRVHASRFGFTLIK--QEKLSLTMEK
>DELTA20_P641346852 YP_001613272 sce2633 transcription-repair coupling factor [Sorangium cellulosum So ce 56]
GSAGSAGALVIRRLVARLIALTPDVDSARALAADTSFLLADDRVLLYLPNEASPYADVNPDRRGAQTRLATLFHLSVLVCPITALIRKVVSRDEITEHAELVIAEQEMDRDALSARLGASGYVRSPLVEDPGTFAVRGALLDVWAPSAELPVRIDFYGDIVASIKTFNPDDQRTVADVKEVWIPPAREAILTPAAFFGAEGYLPAFISFTSYLPDDALRRVVAWQEAGLRVLIAARAQTQVERLVALLRHVVTGSLARGVIAPALALVTEEEIFGASQAFLEDLRNLGVGDHVVHVEHGIGRYLGLVHKQVGSTTVDLIAVEYAGGDKLYLPVYRLNQIQKFSGGEGT-PKLDRLGGQTFAKTKARVEKSVRKMADELLRLYAERRAATAEPVPPPDDDYRAFEATFPFDETPDQARAITEVTADLESGRPMDRLVCGDVGFGKTEVAIRAAFRAANAGRQVAVLCPTTVLAQQHYLSFRSRMASYPIEVRVMSRFQSKQEQDEVSRGLRDGSVDVVIGTHRLLSKDVHFKRLGLLVVDEEQRFGVTHKERIKALKTNVDVLTLSATPIPRTLQMAVSGLRDMSIITTPPVDRRAIRTVVTRHDEAVLREAVLRELGRGGQVFYVYNRVEGLYERAARLAELVPSARICVAHGQMSEQSLEQAMLDFVEGRYDVLCATAIIESGLDIPRANTILIDRADMFGLSQLYQLRGRVGRSKERAYCYLIVPPPNAMTDEARARIEALERHTELGSGFQIASLDLELRGSGDLLGAEQSGTVAQVGFELFCQMLDEAVHELRGEVDTELSFDADALLPEEYISDVGVRLSLYKRLAGAASTEDVQDLAVEMEDRFGPPPLEARRFVHLMRLKTELRRLKALACEASAKGVTLHLRE
>DELTA20_P641264301 YP_001529586 Dole_1705 transcription-repair coupling factor [Desulfococcus oleovorans Hxd3]
GVGKGADAFMVSRIGQPVLVVTASAREAQRFTEDARFFQPADEVALFPSYTVMPYRPVAYHNRTAAERIQLLYGMAVLVLAVDALLQKTIPPGDLCEFAQTVSEGESLDPTALAEKLVAGGYTRTAIVEEPGDFSIRGGIVDLFSPFHEAPARIDLFGDTVESIHFFSPVTQRRGRPTSGITLLPARETVLAKDDTEGMESLMPLVYTLFDYLPGKTLTPLLSWRGLGCVSVIACGGRAQVDRMAYFLTSLVSGQLSAGFRFAALAVITDTEIFGRARDVYLDLETLKQGDLVVHVDHGIGRYEGIRKVTVEGIANDFLLLSYRDGDRLYLSVDRMDMARKYVGADDAEPLLDKMGAKTWGRVKAKARKEAEKIAKELLDLYARRRVQQGHGFHPPGQWFSDFEAGFDFEETDDQLKVINEVLSDMASSTPMDRLVCGDVGYGKTEVAMRSSFMCVCDGFQVAVLVPTTVLAEQHFATFSRRFAGYPFNIACLSRFKTPARQKQIVADLKEGRVDIVIGTHRLLSKDVAFKQLGLVILDEEQRFGVKHKETLKKMRTTVDVLSLTATPIPRTLHMSLSGMRDISVITTPPEHRKAIKTYISEFDDAIIRTAIRKELERGGQIYFVHNNIHKIAFIADHLKKLVPEVRLGIVHGRLDQNTLETCMMQFVNREIDMLVCTRIIESGIDIPSANTIFINRADMFGLAQIYQLRGRVGRSDEQAYAYLFIPRESALGKDARKRLKVLMEHSDLGSGFQIAMNDLKIRGGGAALGVSQSGHITAVGYDMFLQLMEQAVAELKGELNPEINIPVSSFLSEAYISDIDQRMAIYRRLSRVTETREITAVKTELEDRFGPLPAEAENLLLKIMLKTMAAGMGVKRLDLADTQMHLRFSD
>GAMMA2_P639722394 YP_865566 Mmc1_1651 transcription-repair coupling factor [Magnetococcus sp. MC-1]
ELTTGASSWLAVELALPVVLVTGKVQRAESIARELLFFGAQRHILPFPAWETLPFEPLSPYGPLVGDRLATLSRLTVVITTPAAIMQRLMPKAVLARYGFAFSVGDQLNLPQFRELLTRSGYNPVSQVSEPGEYAARGGLIDLFPPGRDEPVRVELFGDEVESIRLFDPSNQRSLDPIPAVEVLPVREVILNADTYQGMEQYLPLFYTLFDYLPKQTLRQISLWQKEQRRIGFVSRTIGQRERMRELLTDLLLGDVSDGFEHPTVVLISEDNVFGVLDQLIASFADLNEGDAVVHVDHGVGRFGGLVSLEVGQLKNDFLLIIYADGDKLYVPVENLDRVGKHSS--GEEVQLDKLGGKRWAKTRAKARKKILEMAEELVAIQAQREATQGVVYSGPDALYQEFASTFPFEETVDQAKAIEAVLEDMASPKAMDRLVCGDVGFGKTEVALRATFRAAMDGKQVAILVPTTILAQQHYENFAKRLAGYPIKVDILSRFRTPKEQKATIEAVGHGTIDVIVGTHRLLQTDVKFKDLGLLVVDEEQRFGVSHKERIKNLRATLDILTLTATPIPRTLNMAMAGVRDISIIASPPADRLAIRTIITHYDKQQVREAILRELYRGGQVFYVHNQVQDIERKAQEIAELVPEARVGVAHGQMRENQLEKVMMEFYRQTFNILVCTTIVENGVDIPTANTIIIDRADKFGLAQLHQLRGRVGRSKHRAYAYMLVPHLRRLTKHAEKRLEALESLGELGAGFMLATHDLEIRGAGNILGDEQSGQIKEVGFELYNQMLREAVVALQQGVVPSINLHLSTYIPEEYVEDVHQRLTLYKRIAELKTYEELQEMRLELADRFGPLPATVDHLLSVMEIKRLCVKLRIIKLDAGPKGGTFQFDE
>BARIO1_P637843073 YP_444216 SRU_0063 transcription-repair coupling factor [Salinibacter ruber DSM 13855]
GAAGSLPAFLLYHLHRPLCVLTPDEDAAAYLQSDLEQLGPDEAILRVPATQKTPYDPDQADSTPLIERADALQRLGILVTSVPAVGELVPPPQAVQRETLTVENGEEIALEALADRLLEQDFSPVEFVEEPGEFARRGGILDVFPYAGTYPIRIDFFGDEVDGLREFDPQTQRSVSRLTTARLVPNLE---REEAARGSI-------ALFQYLPDEVLKRLQKNGDRDLDTFILCDSHGQSSRLRDLLESLVVESLHEGFEWPGLAVFTDHQIFNRDGMNLRDIKNLTRGDFVVHVDHGIGRFDGMKKITVD-NQQEAVRLNFADNDVLYVNVHALHKLNKYTGKEGHQPTLTKLGSEQWEKKKQRTKDQVKEVARDLIKLYAKRKASDGYAFSSDTTWQREMEASFEFEDTPDQAEATKAVKRDMEEPVPMDRLVCGDVGFGKTEVAVRAAFKAVQDGKQVAMLVPTTILAQQHHDTFSERMERFPVNVEVLSRFRSRTEQSKVLEKLEKGQVDILIGTHRITSDDITFDDLGLLVVDEEQRFGVKTKEKLRKMREAIDTLTLTATPIPRTLQFSLLGARDLSLIETPPPNRQPINTEIHTFDEDVIRDAIVYETSRGGQVFFIHNRVKTIHEVAEMVRAMVPNVRVGVGHGQMSASELEDVMLDFVNEKLDVLVSTSIIENGLDISNANTMIINHAEHFGLSELHQLRGRVGRSQRKAFCHLLVPSVHGLTDDARERLKAVEQFSDLGSGFDIAMRDLDIRGAGSLLGAEQSGFIEDVGYETYHKILDQAVKELRE-PETSVDVEEDAYIPESYLRDNTERLNLYRRISDAPDETTLVDLLDEMEDRFGDAPEPVQNLLTGARLRLLGERLRMPKVVKNER-LFLYLPS
>DELTA20_P643721552 YP_002604074 HRM2_28210 Mfd [Desulfobacterium autotrophicum HRM2, DSM 3382]
GVHGSGSAYITAKLFASLVVVLPDRKRAMAFMDELEFYLPKGRVIYFPGYNILPFKALSFHSETASKRIAALYKLHLIVTHVDTLLLKMIPRKRLADAADLVINNEEIDRDLLVARLNAGGYIRTSLVEEPGDYSVRGGILDVFSPSATFPVRIELFGDYVESLRFFSPITQRGIKDIQEIEIVPANEAVIDPARFPGMEGMLSIVYSFMDYVPDHALQPLADWKNDGSRAVAVCSSTTQSQRLVAILRPIASGNLTRGFVFPEIALVTNQEIFGAAKSQFITPEELKEGDIVVHLEHGLGRYEGLVTLKLEGISGDFILISFRDDDRLYLPVDRMEMVEKYIGVDGYSPILDKIGGKTWQKSRAKAKKEVEKMAGELLKLYAERRVAKGFAFSRPDHFFNDFEASFPFEETPDQLKAIDDVLVDMESERPMDRLVCGDVGYGKTEVAIRATFKAVTDGKQVAIVVPTTILAEQHVHTFRERFGNYPITVESLSRFRTKGEQAKIVKDLEQGKLDVVIGTHRLLQKDIAFKSLGLLVIDEEQRFGVKHKEALKKRRSSVDVLALTATPIPRTLHMSLTGMRDISIISTPPVDRQPIVSYISEYDDAIAAGAIQKELERGGQIFFIHNNIKTIFKTAENLKKLVPEVRIAVAHGRLNEASLEKAMLQFINREIDMLVCTTIVESGLDIPSANTMIINRADMFGLAQIYQLRGRIGRGEEQAYAYLFVPEEHRLTRDAQKRLAALMEHRDLGSGFQIAMKDLQIRGAGSALGGSQSGHVAAVGYDMFLKLLDEAVADLKGQLEPEINVTLSTFISDEYVQSIEQRLTIYRRLSQMTTVKEVAAMQQELVDRFGKLPEEAGNMLLKIMLRVLCVKAGVKKLDLTNTSLTLVFSA
>DELTA20_P639704251 YP_847585 Sfum_3479 transcription-repair coupling factor [Syntrophobacter fumaroxidans MPOB]
GAQKPAVAYLLARGMAPFLLVTPTDREAESFAETIAFFAGNDRVWCLPSRSGQKSQSL-GKMATMARRMETLHAFNVFVTSAVALMERLLLPEVLLAHSDYRVKGETVELETLCATLVERGYYRVSLVEEYGDFSIRGGVLDVYAPLYRWPLRLEFFGDELESIRLFHPSTQRSMGILEDAVLLPASEVILDVSQFGAFESIMSVFYTVWNYLDPATVRQFQRWREEGILSFLVCRQKEQAGRLSELLEGVIVGSLDRGFVWPALAVVAEEEIFGKSGLFLSSFQDLHIGDFVVHVDHGIGVYKELVHLAVRGIESDFLLLEYQDGDRLYVPVDKLQKVQKYLGLEGQQPKIDKLGGRSWETAKKKALESAERVAEELLSLYAKRQIGEGFRFSPPDSYFQKFEATFSYEETPDQMRAIDDVLDDMASRRPMDRLICGDVGYGKTEVALRAAFKAVMDGKQVAMLVPTTVLAEQHYQSFTERFEGFPVVVETLSRFKTPAQQTLVLKGLKNGTVDVVVGTHRLLQSDVAFRDLGLLVIDEEHRFGVKHKERMKEMRVSVDVLTLTATPIPRTLHMALAGIRDLSTIETPPQDRHAIETFICKYDEFTIREAVYRELRRSGQVFFVHNHVQSIYQTANAIGRLIPEAKIAVAHGQMKERDLEKVMLDFIRRKIDVLVCTTIIESGLDIPAANTIIINRADKFGLAQIYQLRGRVGRSSEQAFAYLLIPGEHLISRDAQKRLRALLDFSELGAGFKIALNDLQIRGGGTILGSSQSGHIAAVGYELYLELLEKTIKEMKGEIDPEINVPLSAFLPETFIPDKDQRLIAYKRLATLAEPAAVDDLAGEWRDRYGPFPEGARNLVMLAKMRLLFKRLGVVRLDRDKDFFSLHFAP
>DELTA20_P637859216 YP_460942 SYN_02759 transcription-repair coupling factor [Syntrophus aciditrophicus SB]
RLHGSANAFLIAALSEPLVVLSPTEKEARETFQDLSLFLGSGKVLLYPPWDIQTTDMFALQRDVELVRMEVLARLAVIVASLKALMQKVVPRSILDAYLEILAPGSEVPRDELVAKLVAGGYQRMTLVEDKGEFSLRGHVLDIFPPLEDSPLRLEFDGDDLESLRAFDPASQRSTGRREAFVLSPAREVILSEESTSFNPLFLPLFYTFFDYLPGNFVEHIRRWLQEGMLVAFLCSGKEDLQRMRHLLGNLREGRLSRSFLFPDLAAISEEELFGKEGYFLRSFGDLKEGDYVVHKEHGIGLYQGLQKLSVGGIENDFLLINYQSGDKLYLPIDRLDQISRYIGPEGYVPKVDKLGGTSWDTVRERVKKSIQEVAEELVAIYAAREVMERRSFAPPDAVYEEFSAAFPYDETPDQARAIEDIHADMNSAKPMDRLICGDAGFGKTEVAMRSAFRTAMDGRQTAVLVPTTILAEQHCQTFSSRMKDYPIRIEALNRFKSKAEQSSVLEGLRKGQVDIVIGTHRLLQKDVTFKNLGLVIVDEEQRFGVAHKEKLKKLRTLVDVLTLTATPIPRTLHLSLVGIRDLSIINTPPEDRQTIKTYVLEFNEETIREAIRRELARNGQVFFLHDRVRSIYTMARLVEKLVPEADIGVVHGQMKPREIEDVMGRFLRKECNVLVCTTIIGSGLDIPTANTILVNRADRFGLAQLYQIRGRVGRSSEEAYAYLLVPKGVLLSRDAQKRLQVIMDFSEPGSGFRIASSDMEIRGGGNLLGTSQSGHVSAVGYELYTELMEQTIREIKGEIVPEINLGLPAFIPEEYMADVHRRLVTYKRISMADSNEELEEIRDELADCFGYLPPEVTNLLEVIRLRNRLKAIRVKKMGYDTKQMFLFFSA
>P643658942 YP_002561312 MCCL_1909 transcription-repair coupling factor [Macrococcus caseolyticus JCSC5402]
GLNPSAKAMMLAESYMQMVVVTSNLYQAERLERDLIQLVDEEDVFKFPVQDIMIEEFSTKSPDLMQERIRTLTHL-LFLIPVNGLEKLISKKETFLRYHLEIMLGIDVDLSELQQSLIDMGYQKTERVTTLGEFSVRGGLIDIYPMIGE-PVRIELFDTEVDSIRAFDIDSQRSLHNIDKVELSTASEFIFSAESHNILRRMVKFAYTIADYFKEDAISEFDRYRKNDFNIVVLATNDTRKEKIKSMLTDIVQGDLSEGLELPYLVVITERELFKLNAEKIKSYQELNIGDYVVHTHHGVGRYLGVETLLVNKLHKDYIKIQYKGTDQLFVPVDQMSQVQKFVGSEDKDPKLNKLGGTEWKKTKARVQKNVEDIAEELLKLYQERERIEGYQFGPDTEEQENFEMDFPYEPTHDQKQSLIEIKGDMEKSKPMDRLLCGDVGYGKTEVAIRAAFKAVMDGKQVAFLVPTTILAQQHYETIIERMQDYPVEVQMMSRFRTTKEVNETKKGLKSGFVDIVVGTHKLLGKDIVYKDLGLLIVDEEQRFGVTHKEKIKALKTNVDVLTLTATPIPRTLHMSLLGVRDLSVIETPPENRFPVQTYVLEYQHNFIKEAMERELSRNGQVFYLYNRVATIYQKAEQLEMMMPDARIAVAHGQMSERELEETMLGFINGEYDILVTTTIIETGVDVPNANTLIIEDADRFGLSQLYQLRGRVGRSNRISYAYFLHAPNKVLTEVAEQRLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGYDLYSEMLQQAVNEKRGIPQLEIDVEIDAYIPAEYIREEQAKIEFYKKLRSVTTEQELIDVQDEMTDRYGEYPEAVDHLMKIVEIKVNALSFGIVQVRDTGKSIELEASE
>P643725691 YP_002633251 Sca_0153 putative transcription-repair coupling factor [Staphylococcus carnosus carnosus TM300]
GLSGAVKATMMAEKYLPLVVVTNNLYQADKLEADIQQYINDDEIYKYPLQDIMTEEFSTQSPQLMSERVRTLTGL-FFIIPLNGLKKLQTPVDIWQSHQLKLSVGDDIDVDDFLNKLVDMGYRRETAVSHIGEFSLRGGIIDIYPLIGA-PVRIELFDTEVDSIRQFDIESQRSEENQETVEITSASDYIITDDDHQVIRRLVTFMYTLVDYISNNAISEFQRYVNNGYTVVVLVETETKKERVKSMMNEIVEGSLSEGFELPYLAVVTERELFKSNAERIKSYQDLKIGDYVVHVHHGVGRYLGVETLEVGDVHRDYIKIQYKGTDQLFVPVDQMDQVQKYVASEDKTPRLNKLGGTEWKKTKAKVQQSVEDIADELIELYREREMAQGYQYGADSEQQHEFEMDFPYDLTADQSKSIVEIKDDMEKERPMDRLLCGDVGYGKTEVALRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVNIELMSRFRTPKEVKETKKGLEDGTVDIVVGTHKLLAKDVKYKDLGLLVVDEEQRFGVRHKERIKSLKTNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNSNFIKEALERELSRGGQAFYLYNKVQSIYEKKEQLQMLMPEANIGVAHGRMTERELEDTMIGFVDGEYDILVTTTIIETGVDVPNANTLIIEDADRFGLSQLYQLRGRVGRSSRVGYAYFLHPTNKVLSETAEERLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGIPEIEIDLNMDVYLPTEYIPNEQSKIEIYKKLRQIENEEQLMDIKDELIDRFNEYPIQVERLLDIVEMRIHALNVGVLHIKDTGKAVEVQLSE
>P637697665 YP_302343 SSP2253 transcription-repair coupling factor [Staphylococcus saprophyticus saprophyticus ATCC 15305]
GLSGAAKATIIAEKYLQLLVVTNNLYQADKLESDLLQFVEDSEIYKYPMQDIMTEEFSTQSPQFMSERVRTLTAL-LFIVPLNGLKKWLTPVDMWKSHQLTLNVGDDIDIDEFLNKLVNMGYRRESVVSHIGEFSLRGGIVDIYPLIGK-PVRIEFFDTEVDSIRDFDVESQRSEGNIEHVDITTASDYIITEDDHQVLRRLVAFMYTIMDYFKEDAISEFQRFIQNDYTIVVLAETETKKERIQSMLNEITEGSLSEGFELPYLVVVTERELFKSNAEKIKSYQDLKVGDYVVHVHHGVGRYLGVETLEVGGVHKDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKSPKLNKLGGTEWKKTKAKVQQSVEDMADELIELYKAREMSVGYKFGPDTAEQNDFEIDFPYELTPDQSKSIEEIKQDMEIERPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPIEVQLISRFRTTKEVKETKEGLKSGFVDIVVGTHKLLGKDIQYKDLGLLIVDEEQRFGVRHKERIKSLKNNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNTNFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPDANIGVAHGQMNERDLEETMLSFINHEYDIIVTTTIIETGVDVPNANTLIIEDADRFGLSQLYQLRGRVGRSSRIGYAYFLHPTNKVLSETAEDRLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGIPEIEIELNIDAYLPAEYIPNEQSKIEIYKKLRKIESETQLMDVKDELIDRFNDYPIEVERLLEMMEIKVHALHAGVTLIKDVGKQVEVYLSE
>P637151322 YP_185435 SACOL0547 transcription-repair coupling factor [Staphylococcus aureus aureus COL]
GLSPSAKVTMIAEKYAQLLLITNNLYQADKLETDLLQFIDAEELYKYPVQDIMTEEFSTQSPQLMSERIRTLTAL-LFIVPLNGLKKWLTPVEMWQNHQMTLRVGEDIDVDQFLNKLVNMGYKRESVVSHIGEFSLRGGIIDIFPLIGE-PIRIELFDTEIDSIRDFDVETQRSKDNVEEVDITTASDYIITEEDHQILRRLVAFMYTIIEYFQKDAISEFQRYVNQNYHIVVLVETETKVERMQAMLSEIIEGSLSEGFELPDLVVITERELFKSNAEKIKSYQDLNVGDYIVHVHHGVGRYLGVETLEVGQTHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKTPKLNKLGGSEWKKTKAKVQQSVEDIAEELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQAKSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVEIQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKHNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNMSFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPDANIAVAHGQMTERDLEETMLSFINNEYDILVTTTIIETGVDVPNANTLIIEDADRFGLSQLYQLRGRVGRSSRIGYAYFLHPANKVLTETAEDRLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDTVGFDLYSQMLEEAVNEKRGIPEVEVDLNLDAYLPTEYIANEQAKIEIYKKLRKTETFDQIIDIKDELIDRFNDYPVEVARLLDIVEIKVHALHSGITLIKDKGKIIHLSVKA
>P637092077 NP_373713 SA0461 transcription-repair coupling factor [Staphylococcus aureus aureus N315]
GLSPSAKVTMIAEKYAQLLLITNNLYQADKLETDLLQFIDAEELYKYPVQDIMTEEFSTQSPQLMSERIRTLTAL-LFIVPLNGLKKWLTPVEMWQNHQMTLRVGEDIDVDQFLNKLVNMGYKRESVVSHIGEFSLRGGIIDIFPLIGE-PIRIELFDTEIDSIRDFDVETQRSKDNIEEVDITTASDYIITEEDHQILRRLVAFMYTIIEYFQKDAISEFQRYVNQNYHIVVLVETETKVERMQAMLSEIIEGSLSEGFELPDLVVITERELFKSNAEKIKSYQDLNVGDYIVHVHHGVGRYLGVETLEVGQTHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKTPKLNKLGGSEWKKTKAKVQQSVEDIAEELIDLYKEREMAEGYQYGEDTAEQTTFELDFPYELTPDQAKSIDEIKDDMQKSRPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVEIQLMSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKHNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNMSFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPDANIAVAHGQMTERDLEETMLSFINNEYDILVTTTIIETGVDVPNANTLIIEDADRFGLSQLYQLRGRVGRSSRIGYAYFLHPANKVLTETAEDRLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDTVGFDLYSQMLEEAVNEKRGIPEVEVDLNLDAYLPTEYIANEQAKIEIYKKLRKTETFDQIIDIKDELIDRFNDYPVEVARLLDIVEIKVHALHSGITLIKDKGKIIHLSVKA
>P642564350 YP_254423 SH2508 transcription-repair coupling factor [Staphylococcus haemolyticus JCSC1435]
GLSPSAKATIIAEKYLQMLLITNNLYQADKLETDILQYIDHSEVYKYPVQDIMTEEFSTQSPQLMSERVRTLTAL-LFIVPLNGLKKWLTPFELWKDHQITLRVGEDIDVDEFLNKLVNMGYRRESVVSHIGEFSLRGGIIDIYPLIGQ-PVRIELFDTEVDSIRDFDVETQRSNDNIEEVSITTASDYVITDDDHQLLRRLVAFMYTLIDYFAKDAISEFQRYVHNDYHIVVLVETETKVERIQSMLNEVTEGSLSEGFELPYLVVITERELFKTNAEKIKSYQDLNVGDYVVHVHHGVGRYLGVETLEVGDVHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKSPKLNKLGGSEWKKTKAKVQQSVEDIADELIALYKEREMSVGYQYGEDTAEQSAFEMDFPYELTPDQAKSIDEIKGDMERERPMDRLLCGDVGYGKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVQIELISRFRSTKEVKETKEGLKSGYVDIVVGTHKLLGKDIHYKDLGLLIVDEEQRFGVRHKERIKTMKTNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNSNFIKEALERELSRDGQVFYLYNRVQSIYEKREQLQMLMPDANIAVAHGQMTERDLEETMLSFINGEFDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIGYAYFLHSANKVLTETAEERLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGIPEVEMELNLDAYLPAEYIQNEQAKIEIYKKLRKVETEEQLFDIKDELIDRFNDYPVEVERLLEMVEIKIHALHAGVTLIKDKGKQVSLSTKA
>P637367399 NP_765835 SE2280 transcription-repair coupling factor [Staphylococcus epidermidis ATCC 12228]
GLSPSAKATIIAEKYLQMLLVTNNLYQADKIETDILQYVDDSEVYKYPVQDIMTEEFSTQSPQLMSERVRTLTAL-LFIVPLNGFKKWLTPVDLWKDHQMTLKVGQDIDVDAFLNKLVNMGYRRESVVSHIGEFSLRGGIIDIYPLIGT-PVRIELFDTEVDSIRDFDVETQRSNDNINQVEITTASDYIITDEDHQLLRRLVSFMYTLIDYFQKNAISEFQRYVHQDYTVVVLVETETKVERIQSMLNEVTEGSLSEGFELPYLVVITERELFKTNAEKIKSYQDLNVGDYIVHVHHGVGRYLGVETLEVGDTHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKSPRLNKLGGTEWKKTKAKVQQSVEDIADELIDLYKEREMSVGYQYGQDTAEQSAFEHDFPYELTPDQSKSIDEIKGDMERARPMDRLLCGDVGYGKTEVAVRAAFKAVMDGKQVAFLVPTTILAQQHYETLLERMQDFPVEIQLVSRFRTAKEIRETKEGLKSGYVDIVVGTHKLLGKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKKNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNTNFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQRLMPDANIAVAHGQMTERDLEETMLSFINHEYDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIGYAYFLHPANKVLNETAEERLQTIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKR-GPDIEVELHLDAYLPAEYIQSEQAKIEIYKKLRKVETEEQLFDVKDELIDRFNDYPIEVERLLDIVEIKVHALHAGVELIKDKGKSIQIILSP
>P637166794 YP_187737 SERP0141 transcription-repair coupling factor [Staphylococcus epidermidis RP62A]
GLSPSAKATIIAEKYLQMLLVTNNLYQADKIETDILQYVDDSEVYKYPVQDIMTEEFSTQSPQLMSERVRTLTAL-LFIVPLNGFKKWLTPVDLWKDHQMTLKVGQDIDVDAFLNKLVNMGYRRESVVSHIGEFSLRGGIIDIYPLIGT-PVRIELFDTEVDSIRDFDVETQRSNDNINQVEITTASDYIITDEDHQLLRRLVSFMYTLIDYFQKNAISEFQRYVHQDYTVVVLVETETKVERIQSMLNEVTEGSLSEGFELPYLVVITERELFKTNAEKIKSYQDLNVGDYIVHVHHGVGRYLGVETLEVGDTHRDYIKLQYKGTDQLFVPVDQMDQVQKYVASEDKSPRLNKLGGTEWKKTKAKVQQSVEDIADELIDLYKEREMSVGYQYGQDTAEQSAFEHDFPYELTPDQSKSIDEIKGDMERARPMDRLLCGDVGYGKTEVAVRAAFKAVMDGKQVAFLVPTTILAQQHYETLLERMQDFPVEIQLVSRFRTAKEIRETKEGLKSGYVDIVVGTHKLLGKDIQYKDLGLLIVDEEQRFGVRHKERIKTLKKNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVLEQNTNFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQRLMPDANIAVAHGQMTERDLEETMLSFINHEYDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIGYAYFLHPANKVLNETAEERLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGKPDIEVELHLDAYLPAEYIQSEQAKIEIYKKLRKVETEEQLFDVKDELIDRFNDYPIEVERLLDIVEIKVHALHAGVELIKDKGKSIQIILSP
>P641291200 YP_001557240 Cphy_0112 transcription-repair coupling factor [Clostridium phytofermentans ISDg]
GCIDSQKCHLIHALSEK-LVITYNDIKAKEIYEDLKLYDRN--VYLYPAKDIIFYSADIHGNAIVRERMRILKNL-TVVATIDGGMDKLLPLDYLSDKIICIKEDSTIEIECLSEKLIHLGYERQGQVENPGEFAIRGGIIDIYPLTEEAPYRIELWGDEVDSIRTFDVGSQRSIERVSTAVIYPASEIILEPEGSLNLDSYIRFFYSFFDYFANDSIKDLQNWKRNGYRVILLSGSRTRAARLAQDLRDVMHGSVHRGFEYPLLVIISESDIFGAEGKQIQSFTDLNIGDYVVHENHGLGIYRGIEKIEVDKVSKDYIKLEYGGGGVLYILATGLDVIQKYAGADARKPKLNKLNSVEWKNTKAKVKGAVKEIAKELVELYATRQAKAGHSFCEDTVWQREFEEMFPYEETDDQLRAIDDTKRDMESKKIMDRLICGDVGYGKTEIAIRAAFKAISDGKQVVFLVPTTILAQQHYNTFSQRMMNFPISVDMLCRFKTPAQQKKTLENLKKGQLDILIGTHRVLSKDIQFKNLGLLIIDEEQRFGVTHKEKIKQMKGDIDVLTLTATPIPRTLHMSLVGIRDMSVLEEPPVDRLPIQTFVLEHNDEIIREAINRELARGGQVYYVHNRVNGLDEITNTIARLVPDANVAFAHGQMHEHQLEKIMFEFINGEIDVLVSTTIIETGLDISNVNTMIIDNADQLGLSQLYQLRGRVGRSNRTSFAFLMYKRDKLLKEVAEKRLQAIKEFTELGSGFKIAMRDLEIRGAGNLLGAQQSGHMEAVGYDLYCKMLNDAVKGLKGEFDTSIDMDMDAFIPSTYIKNEMQKLDMYKRIAGIENEEEFMDMQEEMLDRFGDIPTSVNNLLNIALLKSMAHQVYVSNLVQKGTEVKLMYPK
>P638011841 YP_618497 Ldb0363 Transcription-repair coupling factor [Lactobacillus delbrueckii bulgaricus ATCC 11842]
GVERGAFAVLIQAYLAPLLLIEENEYKAQERHNDLSRLLADDDLELFVLDGNLATQTAVSSPDELSSRIQCLNLL-VVIATPQGLQYPLSAPALFKKGQKHFAVGDEIALPDLAQWLNQAGYHRENLVVKPGEFAMRGDIVDLYPLDRESPLRLEFFGDEIDTIKTFDLTSQRSLEELPEATVPAASDHVFTAELPDDCNRYLDYLLSLLDYLPAKGLTELDSYAKKGQTVVLQVSSRRQAEEFNRSCHDLVIGGYASGFVLPDLVYLTEKELFNQNAQRLRSYTELKPGDYVVHVNHGIGRFEGIQTLETDGKKRDYITITYQKGDQLFVPDDQLSLVQKYVASEGKQPHINKLGGSEWAKTKKRVAARVEDIADDLIELYAKREAEKGFAFSPDGSDQAAFEAAFPYEPTPDQLRATAEIKADMEKAKPMDRLLVGDVGFGKTEVAMRAAFKAICDGKQVAFLVPTTILAQQHYQTIKDRFKGFPVEIASFSRFQGQAESKKIVAGLKDGSIDLVVGTHRILSKDVQLKDLGLLIIDEEQRFGVAHKEKLKQLKTNIDVLTLTATPIPRTLHMSMIGIRDLSVMETPPQNRYPIQTYVLEQLPGTVKEACQREMQRGGQVFYLHNRVGDIEETVARLEQLLPEARIAYAHGQMSENQLEDILSRFLDREFDILVTTTIIETGIDMPNVNTMIIEDADHYGLSQLYQLRGRIGRSARLAYAYFLYQPNKVLTEVGEKRLDAIRDFTELGAGFKIAMRDLSIRGAGNMLGAQQHGFIDSVGYDLYSQMLADAIKER-QGSNAEVDLGLEAYIPEDYIADQEQKIEFYKKIKGIGSLQNREDIEDELLDRFGDYPAAVENLLNVASLKASCDLAQILTLVKEKAQIRVIFSD
>P639670307 YP_812418 LBUL_0318 Transcription-repair coupling factor (superfamily II helicase) [Lactobacillus delbrueckii bulgaricus ATCC BAA-365]
GVERGAFAVLIQAYLAPLLLIEENEYKAQERYNDLSRLLADDDLELFALDGNLATQTAVSSPDELSSRIQCLNLL-VVIATPQGLQYPLSAPALFKKGQKHFAVGDEIALPDLAQWLNQAGYHRENLVVKPGEFAMRGDIVDLYPLDRESPLRLEFFGDEIDTIKTFDLTSQRSLEELPEATVPAASDHVFTAELPDDCNRYLDYLLSLLDYLPAKGLTELDSYAKKGQTVVLQVSSRRQAEEFNRSCHDLVIGGYASGFVLPDLVYLTEKGLFNQNAQRLRSYTELKPGDYVVHVNHGIGRFEGIQTLETDGKKRDYITITYQKGDQLFVPADQLSLVQKYVASEGKQPHVNKLGGSEWAKTKKRVAARVEDIADDLIELYAKREAEKGFAFSPDGSDQAAFEAAFPYEPTPDQLRATAEIKADMEKAKPMDRLLVGDVGFGKTEVAMRAAFKAICDGKQVAFLVPTTILAQQHYQTIKDRFKGFPVEIASFSRFQGQAESKKIVAGLKDGSIDLVVGTHRILSKDVQFKDLGLLIIDEEQRFGVAHKEKLKQLKTNIDVLTLTATPIPRTLHMSMIGIRDLSVMETPPQNRYPIQTYVLEQLPGTVKEACQREMQRGGQVFYLHNRVGDIEETVARLEQLLPEARIAYAHGQMSENQLEDILSRFLDREFDILVTTTIIETGIDMPNVNTMIIEDADHYGLSQLYQLRGRIGRSARLAYAYFLYQPNKVLTEVGEKRLDAIRDFTELGAGFKIAMRDLSIRGAGNMLGAQQHGFIDSVGYDLYSQMLADAIKERQ-GSNAEVDLGLEAYIPEDYIADQEQKIEFYKKIKGIGSLQNREDIEDELLDRFGDYPAAVENLLNVASLKASCDLAQILTLVKEKAQIRVIFSD
>P639672130 YP_814117 LGAS_0271 Transcription-repair coupling factor (superfamily II helicase) [Lactobacillus gasseri ATCC 33323]
GVNSGAFSAVLMQMLSPLILVEDSEDKAQLLLDELGNLLPDEMVFSFPVDATIATQTAVASPDELSQRLQTLKFL-IVVITPQALQYKLSDPRDFIKAKQVFKPEAEFDLDELTAWFTQAGYRRENIVARPGEFARRGDILDVYPLDQENPVRIEFFGDEVDTVKEFDAATQRSLEEKDIVSIGPALDRVFSSRLPENYAFLIDYLLNLVDYLDKNGLSELTRFANEGNTVVLQADSATRAKQIAQNLVDITVGDFAHGFALPSLVYLTERELFNQNAQRLRNYNELKPGDYVVHVNHGIGRFEGIKTLDVDGKKRDYITITYQHHDQLFVPADQLGLVQKYVASEGKVPHINKLGSAEWAKTKKRVQSKVEDIADDLIELYAKRESEKGFAFSPDDDLQKEFEDAFPYPETPDQLRSIREIKADMESPKPMDRLLVGDVGFGKTEVALRAAFKAIRDGKQVAFLAPTTILAQQHFETMQDRFKNFPVNCALLSRFQTPAEVKAIIEGVKNGKIDMVVGTHRLLSKDVKFKDLGLLIVDEEQRFGVKHKERLKELKANIDVLTLTATPIPRTLHMSMVGVRDLSVMETPPTNRYPIQTYVMEEMPSVVREAVLREMKRNGQVFFLHNRIDDIDKVVSRLEELIPEAKIEYIHGRMSENQMEDIMYRFSRNEFDILVTTTIIETGVDMPNVNTMIVENADHYGLSQLYQLRGRIGRSARLAYAYFLYQPNKVLTEIGEKRLSAIRDFTELGSGFKIAMRDLSIRGAGNMLGKQQHGFIDSVGYDLYAQMLDDAIKKRK-GSNAEVQFNLEAYIPDDYIADQEQKIEFYKKIKGINDQKEAENIADELIDRFGDYPLAVENLLNVSKVKADADLAQVVAINQKSNDLQIIFNN
>P637479080 NP_964294 LJ0277 transcription-repair coupling factor [Lactobacillus johnsonii NCC 533]
GVNSGAFAAVLMQMLKPLILVEDNEEKAQTLLDELGNLLPDDMVFSFPVDATIATQTAIASPDELSQRLQTLEFL-IVVVTPQALQYKLSDPRDFTKAKKIFKPEAEFDLDKLTEWLTQAGYRRESIVARPGEFARRGDIVDIYPLDQENPIRIEFFGDEVDTVKEFDSATQRSLEEKDSISIGPALDRVFSPHLPDNYAFLIDYLLNLIDYLDKDGLSELTRFSNEGNTVILQADSETRAKQIAQNLVDITVGNFAHGFALPSLVYLTERELFNQNAQRLRNYNELKPGDYVVHVNHGIGRFEGIKTLDVDGKKRDYITITYQHHDQLFVPADQLGLVQKYVASEGRVPHINKLGSSEWTKTKKRVQSKVEDIADDLIELYAKRESEKGFAFSPDDDLQKEFEDAFPYPETPDQLRSIREIKADMESPKPMDRLLVGDVGFGKTEVALRAAFKAIRDGKQVAFLAPTTILAQQHFETMQDRFKDFPVNCALLSRFQTPAEVKEIVEGVKSGKIDMVVGTHRLLSKDVQFKDLGLLIIDEEQRFGVKHKERLKELKANIDVLTLTATPIPRTLHMSMVGVRDLSVMETPPTNRYPIQTYVMEEMPSIVREAVLREMKRNGQVFFLHNRIDDIDKVVSQLEELIPEAKIEYIHGRMSENQMEDIMYRFSKNEFDILVTTTIIETGVDMPNVNTMIVEDADHYGLSQLYQLRGRIGRSARLAYAYFLYQPNKVLTEIGEKRLSAIRDFTELGSGFKIAMRDLSIRGAGNMLGKQQHGFIDSVGYDLYAQMLDEAIKKRK-GSNAEVQFNLEAYIPDDYIADQEQKIEFYKKIKGINHQKEADNIADELIDRFGDYPLAVENLLNVSTIKADADLAQVVSLTKSDDKLQVIFNN
>P637625517 YP_193197 LBA0273 transcriptional repair coupling factor [Lactobacillus acidophilus NCFM]
GANAGAFSLLLKQIISPLILVEENENKAQNLYGELSAILDSEQVQIFSLDATIATQTAVSSPDELSSRIQALSFL-IVITTPQGLQYKLSNPTDFAQAKRVFIPEKEYELTELNNWLVHSGYQKEALVAKPGEFAIRGDILDIYPLDRENPVRIEFFGDEIDTVKEFNLATQRSTQEIDLVEITAAQDRVFSSDLPQNYSFLVDYLISLLDYLAPNGQSELESYKKSGQTVILQADNNKRARQIDQTMVDIVVAGYTSGFTLPTLVYLTERELFNKNAQRLRNYTELKPGDYVVHINHGIGRFEGIKTLENNGVKRDYITITYQRGDQLFVPADQLSLVQKYVGSEGKTPHINKLGGSEWAKTKRKVQSKVEDIADDLIELYAKRESEKGFAFSPDDDLQRKFDDAFPYPETADQLRSIKEIKEDMEKPKPMDRLVVGDVGFGKTEVALRAAFKAVQDNKQVAFLVPTTILAQQHYETIQDRFKDFPVNIAMLSRFQTPAESKEIIEGLKDGKIDLVVGTHRILSKDVEFKNLGLLIVDEEQRFGVKHKERLKQLKANIDVLTLTATPIPRTLHMSMVGVRDLSVMETPPQNRYPIQTYVMEQIPSVVKDACLREMQRDGQVFYLHNRISDIDETVEKLQQLIPNARIASAHGRMSQNQLEDILYRFLNREFDILVTTTIIETGIDMPNVNTMIIEDADHYGLSQLYQLRGRIGRSARLAYAYFLYQPNKVLTEVGEKRLDAIRDFTELGSGFKIAMRDLSIRGAGNMLGAQQHGFIDSVGYDLYSQMLSDAIKERKGKSNAEIDLKLEAYIPDSYIGDQEEKIEFYKKIKAVNNQEELDKIEDELIDRFGDYPVSVENLLAVAGLKVNADLAQVLVLKISDDKIKVEFNN
>P641310955 YP_001576809 lhv_0291 transcriptional repair coupling factor [Lactobacillus helveticus DPC 4571]
GANAGAFSLLLKQIVTPLILVEENENKAQNLYGELSAILPDGSVQIFPVDATIATQTAVSSPDELSNRIEALNFL-IVVTTPQGLQYKLSDPQEFAQAKKDFEPGKEYELTDLNKWLVSLGYKKEALVARPGEFAIRGDILDVYPLDRENPVRIEFFGDEIDTIKEFDLATQRSQEEIDHVEISAAQDRVFSVELPDNYAFLVDYLISLLEYLDKNGQSELESYQKSGQTVVLQADNAKRAKQIDQTMVDIVVAGYTSGFSLPSLVYLTERELFNKNAQRLRNYTELKPGDYVVHVNHGIGRFEGIKTLENNGVKRDYITITYQHGDQLFVPADQLSLVQKYVASEGKTPHINKLGGSEWAKIKRKVQSKVEDIADDLIELYAKRESEKGFAFSPDDDLQKQFEDAFPYAETPDQLRSIKEIKEDMEKPKPMDRLVVGDVGFGKTEVALRAAFKAIQDNKQVAFLAPTTILAQQHYETIQDRFKDFPVNTAMLSRFQTLAESKEIIEGLKEGKIDLVVGTHRLLSKDVEFKDLGLLIVDEEQRFGVKHKERLKQLKANIDVLTLTATPIPRTLHMSMVGVRDLSVMETPPQNRYPIQTYVMEQIPSVVRDACLREMQRDGQVFYLHNRISDIDETVEKLQQLIPNARIASAHGRMSQNQLEDILYRFLNREFDILVTTTIIETGIDMPNVNTMIIEDADHYGLSQLYQLRGRIGRSARLAYAYFLYQPNKVLTEVGEKRLDAIRDFTELGSGFKIAMRDLSIRGAGNMLGAQQHGFIDSVGYDLYSQMLSDAIKERKGKSNAEIDLKLEAYIPDSYIGDQEEKIEFYKKIKAVNNQEELDKIEDELIDRFGDYPAAVENLLAVAGLKVDTDLAQVLVLKKDNNTIKVEFNN
>P643609994 YP_002507362 Ccel_3090 transcription-repair coupling factor [Clostridium cellulolyticum H10]
GPSDSQKVHLIYSLCTRGLYITYNEMQARRVYDDFSFFLGDD-VLYYPPKETMLYNVEARSNDIIYQRTKTLLNC-MVVMSAEALIQMISPVELFREGIMDFYVGSQVNLDELVSKLVLYGYERVESVEGKAQFAVRGGIIDVFAVNSEHPVRIELFDTDVDSIRHFDETTQRSTNSIDECRIAPARDVVYKEVYFPGIDRYYPYILSVIDYIESESIDDIGQLRKREYKIIVLSGPSGRGHRLVETLATVTHGSLQKGFEYPTFVVISDIEVFGQAGNKIKAFSDLNIGDFVVHQAHGIGQYIGIENLSVGEVKRDYLKIRYQEGDFLYIPTNQLDLLQKYIGSEGKTPRVNKLGGTEWAKTKSRVKESLQQLAAELIKLYAQRQSAKGHSFSEDTVWQRQFEELFPYQETDDQLKCIDEIKKDMESEGLMDRLLCGDVGYGKTEVAIRAVFKAVMDGKQVAYLAPTTILAQQLYENFKTRMNDFPVTVDVMSRFRTPAEQKKIVKSVKAGNTDILIGTHRLLQKDVEFKDLGLLVIDEEQRFGVTHKEKLKTLKPNVDVLTLTATPIPRTLHMSLVGIRDISVLEDPPEERYPVQTYVMEYNMELIRDGIIREMARDGQVFYMYNRVRGIDLKAQEIRKMIPDARVAVAHGKMNEKELEDVMYGFINGEYDVLVCTTIIESGLDMPNVNTIVVEDADRMGLSQLYQIRGRVGRSNRLAYAYITYKKDKVLSEVAEKRLQAIKEFTEFGSGFRIAMRDLEIRGAGNLLGSEQHGHLETVGYEMYCKLLDEAVQELS-GEEMAVDLNVNAYIDNEYISSEEQKIDMYKKIAAIQNENDVIDLKDELIDRYGDIPEEVENLMDIAYIKALAVECGFIGIVQKDDTILFQLRK
>P640108045 YP_001039024 Cthe_2632 transcription-repair coupling factor [Clostridium thermocellum ATCC 27405]
GPSESQKVHIACALCGKGIYIAYNEMQARKMFEDVSFFFGKD-AVFFPSKEIMLHDVEAKSYDSIYERINALYRI-FIVTSAEALCQKLIDRKLFKESIVNVALGDRIDLGLFTQKLVSIGYERVTTVEGKSQFAVRGGIVDIFPVNADTAVRIELFDDEVDSVRSFDTMTQRSVENLEAVTILPARELIYPPGYFAGMDRYIPYIIAVIDYIDSEILEDISHWKKNRARVVILSGTKSRGEMLAETLRTITHGVLNRGFEYPGFVVVSGKELFGQ-GKKISVFTDLNVGDYVVHYVHGIGKYIGIEQLVVENVKKDYLKIQYSDGDYLYVPTNQLDLIQKYIGSEGKTPKLSKLGGTDWAKTRARTKESLKELAQELINLYAQREMAEGHAFGKDTVWQKQFEDLFPYQETEDQLRCIEEIKRDMESPRPMDRLLCGDVGYGKTEVAMRAVFKAVMDGKQVAYLVPTTVLAQQHYNTFKERMKDFPITVEVLSRFRTQAEQKRILKDVKAGMVDVLIGTHRLLQKDVCFKDLGLLVIDEEQRFGVTHKEKIKRMKTNIDVLTLTATPIPRTLHMSLVGIRDISTIEEPPEERYPVQTYVMEYNDEVVRDAINREMSRGGQVFYLYNRVRAINQKAAEIQKLVPEARVAIAHGQMNETELENIMFRFINGEYDILVCTTIIESGLDMPNVNTIIVEDADKMGLAQLYQLRGRVGRSNRLAYAYITYKKDKVLSEIAEKRLQAIKEFTEFGSGFKIAMRDLQLRGAGNLLGPQQHGHIDSVGYDMYCKLLAEAVNELRGIEEISIDVNVSAYIDNDYIGDENQKIDMYKKIASINDEQDVIDAEDELMDRYGEIPQPVKNLLQIAYIKSLAKACGFSSVQEKNDTVIFQYSE
>P641569166 YP_001691789 FMG_0481 transcription-repair coupling factor [Finegoldia magna ATCC 29328]
GVIKEAFASFVYATSKPLVVVVEDNMRARNLTEYLNDIEENI-CEFFPSRELNFYNAKSLDDNAEDQRVNVLFKL-IIVTTFDALTKKITKKSVAKKYAFTIKDTDLINLEELQEKLRALKYERVDTIESKGQFAIRGGIVDIFPVHSRFPVRIELFDDEIDSMRFFEVSTQRSIEDCKFVDIISCSELIIEDSEYE-IDLVSCFLTTVFDYFADDTIENIKSNSLRGFKQIVFAANVERKNMLKDLFLTITQKNLPNGFEIKDYLIITYKEIFGRTGQDIVNYSDLNIDDYVVHENHGIGQYKGIEKIDVNGIQKDYIVIQYKANDRLMIPTDQMNLVQKYIGGGNVKPSLNKLSGNDWAKAKQKAKKSVDEMADDLVELYSKRAKLKGYQFSQDTEWQREFEDSFPYEETDSQVRSIEEIKADMESDRPMDRLLCGDVGYGKTEVAIRACFKAIMDGKQVAFLVPTTILAQQHFNTIKERFRDYPIRVEMMSRFVSPARQKQIMKDVQRGLVDLLVGTHRILSKNLKFKDLGLLVIDEEQRFGVRHKEKLKSMRENVDVLTLSATPIPRTLQMGLTGIRDMSLLEEPPEDRTPISTYVTEYNPSLIRDAIIRELDRGGQIYFVYNRIEDIDQMEFKLKELVPELNIAIAHGRMNEKELENVMLDFQDGIYDLLLCTTIIETGLDIQNVNTMIIYNADKMGLSQLYQLKGRIGRSDRTSFAYFTYEGQKSLTEISEKRLMAIKDFTEFGSGFKIAMRDLELRGAGNLLGESQHGHIAKIGYDLYVKLLEQAVREAK-GNTVIIEIKVNGYIPEDYISENETKIDIYKKIASIQDEDDYSEIIDELIDRFGDVPKPIVNIMDVSIIKAFCARLSIESIKEIKGELFLQFSS
>CHLOFL30_P637120843 YP_181993 DET1281 transcription-repair coupling factor [Dehalococcoides ethenogenes 195]
SVLDAGRGFSLAAVYRPMLIITSQPERARELLVQIAAYG-EE-PGFLPDPSLLPYQRAVSDRNTSLEKMRILGGF-IIVSAVPALLQRYVSPEIFKQSFLQVWTGLETEPQDLIRRFQQLGYRQENIVEIPGTYSRRGGILDIFPYTEDNPVRLEFFGNTLESLRVFDPQSQRSGS-LNELTISPASELFHLGQKPEYPDFFAPLFNSIFDYLPAD--EKLGELKGHTGRVVIISHQAARLAEL---LKELVQGILGGGWNLSGVHILTDAELFGFPSARKGVVLDIKPGEFVVHIDHGVALFSGVSHL--NGMDKEYLILNYAGGDKLYVPTDQMDRVNRFIGSGDEPPSLHRLGTQEWQRAKEKASESAEETARELLDIYAKRKMASGYPFSTDTVWQQEMEASFPYLETPDQLKALYDIKADMENPRPMDRLILGDVGYGKTEVAIRAAFKAVMDGKQVAVLVPTTVLAQQHYTTFRERLATFPVKIEVLSRFCSPSEQKTTVENLERGEVDICIGTHRLIQADITFKDLGLVIIDEEQRFGVAHKEFFKKLRAQVDVLTLSATPIPRTLHMSLVGVRDMSIIETPPGERLPIKTVVAAFDERLIREAILREMERNGQVFFVNNRVMGINLLAERIQQLVPEARIGIAHGQMAEEKLAAVMADFVRHELDVLVCTTIIESGVDVPNANTLIINRADRFGLTQLYQLRGRVGRSSQLAYAYFLYEKDKRLTSDAEKRLKTIYEAAELGAGYGIAMKDLEIRGAGTLLGVKQSGYINSVGFNLYTQMLSEAVAGLKGSPAPKLDLPLDAFIPEYYIQDLDLRLSIYQQLSAITNLAGVLEKEKELADRFGQIPPELENLLYSLRLRLLAKKAHVDTIVTEGSQIVVRMLG
>CHLOFL30_P640530017 YP_001214550 DehaBAV1_1092 transcription-repair coupling factor [Dehalococcoides sp. BAV1]
SVLDAGRGFSLAAVYRPMLVITSQPERARELLEQIAAYG-EE-PGFLPDPSLLPYQRAVSDRNSSLEKMRILGGF-IIVTAVPALLQRYISPKVFEQSFVQVWTGLETEPQNLICRFQQLGYRQESIVEMPGTYSHRGGILDIFPHTEDNPVRLEFFGNTLESLRNFDPQSQRSGKQVNELTISPASEIFHLGQKPEYPEFFAPLFNSILDYLPAD--EKLPELKGHAGRVVIVSHQAARLTEL---LAELVQGILGAGWSLSGLHVFTDAELFGFRKGVVLDI---KPGEFVVHIDHGVALFSGVSHM--NGMDKEYLILQYAGGDKLYVPTDQMDRVNRFIGSGDEPPSLHRLGTQEWQRAKEKASESAEETARELLEIYAKRELASGYAFSADTVWQQEMEASFSYVETPDQLKALYDVKEDMEKPRPMDRLILGDVGYGKTEVAIRAAFKAVMDGKQVAVLVPTTVLAQQHYTTFRERLATFPVKVEVLSRFRSQSEQKEVVENLEKGEVDICIGTHRLLQADIKFKDLGLVVIDEEQRFGVAHKEFFKKLRAQVDVLTLSATPIPRTLHMSMVGVRDMSIIETPPGERLPIKTVVAAFDERLIREAILREMERNGQVFFVNNRVMGINLLAERIQQLVPEARIGIGHGQMAEEKLAAVMADFVRHELDVLVCTTIIESGVDVPNANTLIINRADRFGLTQLYQLRGRVGRSSQLAYAYFLYEKEKRLSGDAEKRLKTIYEAAELGAGYGIAMKDLEIRGAGTLLGVKQSGYINSVGFNLYTQMLSEAVAGLKGSPAPKLDLPLDAFIPEYYIQDLDLRLSIYQQLSALTSLAGVQEKEKELADRFGAMPPELENLLYSIRLRLLAKKAHVDTIVTEGSQIVVRMLG
>CHLOFL30_P637703615 YP_308204 cbdb_A1211 transcription-repair coupling factor [Dehalococcoides sp. CBDB1]
SVLDAGRGFSLAAVYRPMLVITSQPERARELLEQIAAYS-GEEPGFLPDPSLLPYQRAVSDRNSSLEKMRILGGFRIIVTAVPALLQRYISPKVFEQSFVQVWTGLETEPQNLICRFQQLGYRQESIVEMPGTYSHRGGILDIFPHTEDNPVRLEFFGNTLESLRNFDPQSQRSGKQVNELTISPASEIFHLGQKPEYPEFFAPLFNSILDYLPAD--EKLPEL--KGHRVVIVSHQAAR---LTELLAELVQGILGAGWSLSGLHVFTDAELFGFRKGVVLDI---KPGEFVVHIDHGVALFSGVSHMN-DGMDKEYLILQYAGGDKLYVPADQMDRVNRFIGSGDEPPSLHRLGTQEWQRAKEKASESAEETARELLEIYAKRELASGYAFSADTVWQQEMEASFSYVETPDQLKALYDVKEDMEKTRPMDRLILGDVGYGKTEVAIRAAFKAVMDGKQVAVLVPTTVLAQQHYTTFRERLATFPVKVEVLSRFRSQSEQKEVVENLEKGEVDICIGTHRLLQADIKFKDLGLVVIDEEQRFGVAHKEFFKKLRAQVDVLTLSATPIPRTLHMSMVGVRDMSIIETPPGERLPIKTVVAAFDERLIREAILREMERNGQVFFVNNRVMGINLLAERIQQLVPEARIGIGHGQMAEEKLAAVMADFVRHELDVLVCTTIIESGVDVPNANTLIINRADRFGLTQLYQLRGRVGRSSQLAYAYFLYEKEKRLSGDAEKRLKTIYEAAELGAGYGIAMKDLEIRGAGTLLGVKQSGYINSVGFNLYTQMLSEAVAGLKGSPAPKLDLPLDAFIPEYYIQDLDLRLSIYQQLSALTSLAGVQEKEKELADRFGAMPPELENLLYSIRLRLLAKKAHVDTIVTEGSQIVVRMLG
>CHLOFL30_P643624064 YP_002521908 trd_0670 transcription-repair coupling factor [Thermomicrobium roseum DSM 5159]
ELPVAARPAVLAALARPLLVIVPRQAHADELADAVGQLLGEIPVEVWQAPETLPYDVFAQDRASAVERSWFLQRM-LFIAPARGLLQLLPPNESLRGCPLTLRVGQKMALQTVLDYLVDSGYAPVPLVQQPGSFSRRGGIVDVWPPGNDLAVRIEFFGDEIDSIRRFEPTTQRSVDRLHSIMLLPLSEAPLPQLLVPLPELALPFVFSLLDRFPRSFPAVLAPFLAEDYAVTLVTEQADRLAHLLSESSQIARGRLPGGWKHRELLLLTDRELFGLFEVTSDLLSRLVPGAYVVHVDHGIARYGGLVHLTINGVHREYLLLEYAENDRLYLPVDQLDRITLYESLDGE-PKLTRLGSPEWSRVKRRVREAVRELAFELLQLYAAREAAPGIAFGPDTQWDRELEESFPYEETPDQWRAIQEVKADMERPRPMDRLLCGDVGFGKTEVALRAAFKAVNNGYQVAILVPTTVLALQHYNTFRERLASYPVRIEMLSRLRSKREQRAIIEGLRAGTVDIVIGTHRLLQRDVAFKRLGLVIIDEEHRFGVAHKEHFKRLRTNVDVLTMTATPIPRTLYLALSGVRDLSVIATPPVDRTPVRTFVTPARDSVIREAILREIARGGQVYVVHNRVHSILDFAQRLRGLVPEARFAVAHGQMPEQELERIIVDFIERKYDVLICTAIIESGVDIPSVNTIIIDQAQQLGLTQLYQLRGRVGRSHQRAYAYLLYDDRRPLSAEARARLEAIQEATELGAGLQIALRDLEIRGAGNILGPEQSGHIAAVGLELYTQLLARAVQELREGPSVTIDLPIEATIPSEYCGDEAIRMRLYQRFAEIRTDEQLEDLVSEIRDRFGPLPDPVQRLVDLAQLRLWANRLGLASLIERDGELFIRPVV
>ACTINO135_YP_643688-NC_008148 transcription-repair coupling factor {Rubrobacter xylanophilus DSM 9941} [Chromosome ]
QAPRRLRAYLAARNERPVLLLSSTEEDAARYARDAACFT-DEPVVHLPSRGVPYGDVFDPEVWRVGARQRALHALRVVAAGPLALMERTPLHE-----PLRLAGGVELDMDEVLLRLAALGYERVERVFRPGEFAVRGGILDLFPSTRRSPVRVEWWGDEVESVRAVSLATRRAVE-LAAVTVYAAREGDL---RVPGLDRLLLALG------PAG--RRLGGLVEDGMAVFIACGSGSQVRRTVYALGQAVPGEVEEGFSYPEIAVVRQDAVLGRAGRALTSFADLKPGDLVVHAVQGIGRFEGLVSKEVLGVTRDYMQVTYRGGDTLFVPYEQMELLHKYVGDG---ARLDRLGGESWARVTERVRRRVRMLAGELLRLHAERARAEGFAFPPDGEWERELEESFPYQETPDQAAAIAAVKEDMQRPRPMDRLVCGDVGFGKTEVAVRAAFKAALAGKQTLMLAPTTILVQQHYRTFRERLERFAVRVESLSRFTTAAERRRILRDLASGEVDILIGTHALLGAEVRPKDLGLLVVDEEQRFGVRHKERIKQLKTSVDVLTLTATPIPRTMQMGLSGLRDISVIETPPAGRRSVLTHVGPYDEELVRRAIEREVARGGQVFFVHNRVETIEEAAQRLRELVPGVRFAVAHGQMPERALEEVMQRFLEGEADVLVTTTIVESGLDIATANTLIVERADAMGLAQLYQLRGRIGRSTEQAYAYLFAPLGA--TLEAQRRLEALLDFTELGSGFAVAMRDLEIRGAGNLLGAEQSGHIAAVGFEMYLRLLEEAV-ALERGRPVIVEVLLDAYLPPEYVADEIERVDLYRRASAAGSLAEVDDLAEELEERFGPLPEPARNLLGLTRLKILGRRAGASSVGYRSGALTVGVSP
>P642642439 YP_001916254 Nther_0067 transcription-repair coupling factor [Natranaerobius thermophilus JW/NM-WN-LF]
GISGSEFPLILAGLFRPITLITYDNYRAESLYSDLVTLLDKEQVYIYPEHQVYPFELAWQSRDVNNERAQVLQAM-VYIFSLKSAKEKLSPAQVVKQTFLNLEVGNELSPTMIAEKLTGLGYENTSMVEQKGQFSHRGGIIDVFPVASELPVRIEFFDDEIESIRAFDLATQRSLKEYNSLVVGPGSQLVIGDNSLPHFHRYLSYFYTIIDFLPTNSLKEMKQWMNNNYRIILFSPTPESARTLYENLKKIAVGDLKSGFILQELAVITYGDLWGHKAVKVSDYRELQVEDYVVHEKHGIGKYMGIKTLEVGGLYKDYLHIKYAGNDSLYVPTEQIDEIQKYVGKEGKPPKLYSLGSSEWQKVKQRVKSSVKELAEDLLKLYAERSSRKGYAFSQDTPWQKEFEDYFPYELTPDQKKAISEIKEDLESEQPMDRLLCGDVGYGKTEVAMRAAFKAVMEGKQVCVLVPTTILAQQHFQTFKERFAPYPVDIRVISRFSSQKDEKLVKEEMKEGNAEIIIGTHKLLNKSVKFRDLGLLIIDEEQRFGVQHKEKIKMLKKNLDVLTMTATPIPRTLHMSLVGVRDLSVIETPPEGRFPVQTYVMEHSPQLIREAVNREISREGQVYVVHNRVKGINKVAKEVADWVPDAKVGVAHGQMPEKQLERVMLDFYEGKYDVLVSTSIVEAGLDIQNVNTIIIYNADRMGLSQPYQLRGRVGRSNRMAYAYLTYQKDKVLTQEAEKRLKAIKEFTELGSGFKLALRDLEIRGAGNILGPEQHGHIMAVGFDMYTKMLKDAIKEIQE-EEVKVELNINAYLPTTYISDHEQKITIYKKARSINSYSEANDLETELKDRFGSLPQEVKNLLDITRLKVLARETGIISITQGYW-VHLDLDP
>P640159372 YP_001090022 CD3501 transcription-repair coupling factor [Clostridium difficile 630]
GLLPVQKPHISYSIFNQMIFITSSDLEAKKVYEDLSFYMEDK-VEYLGFQDIYFYHLDAKDRNEEAKKLKVLLKL-ILVTSIEAVLRKYIPKQVLLDSVSHYKVGDSLDLEKLTEKLVSLGYERVSKIEGFGQFSIRGGIIDVFSLEYTNPIRMELFDDEIDSIRTFDVYSQKSIDKLQQFSITPSREFIYPEKYFEGVENYIDYIYSIFTYLADDAIEELNRLKYNGYKIILATNTLERANKLGKDLLDIVPAHINSGFQYKSFVVITDNEMIGVKGKKIESFLDLSVGDYVVHENSGVGRYTGIEQITVNAIKKDYMKIVYQGGDNLYVPIDQMDKVQKYIGAEVEKVKLNKLGTNEWTKAKAKVKKEIEDMTKDLIELYAKREKIQGYKFSKDTPWQAEFESLFPYQETEDQLKAIEETKKDMESSKVMDRLVCGDVGYGKTEVAIRSIFKACMDQKQVAVLVPTTILAQQHYNTFKERFENYPLRVEVLSRFKTPKQQKQIIEDAKKGLVDILIGTHRIISKDINLPNLGLVVIDEEQRFGVKHKEALKKIKSTVDVLTLSATPIPRTLHMSLSGIRDMSVIEEPPQERHPVITYVTESKESVIQDEIERELSRGGQVFFVYNRVEHIEEMASMIQKLVPDARVAVAHGRMTSKSLENIILGFLNKDYDVLVCTTIIETGMDISNANTMIIYDADKMGLAQLYQLRGRVGRSSRQGYAYLLYEKDKTLSEIAEKRLKAIREFTEFGSGFKIAMRDLEIRGAGNILGSQQHGHMAVIGYDLYVKMLNDAIKKVKGEIDVEIDLSVNAYIPDNYIKDELIKIEMYKKIASIENKEDMLDIQEELEDRFSDIPKPVQTLLTIAYIKSLCKILKIEKIR--------QLKD
>P640781073 YP_001318056 Amet_0160 transcription-repair coupling factor [Alkaliphilus metalliredigens QYMF]
GLNDSQKGHMSYGLFDQVCILTYSEVEARKIEQDLKFYIGDR-GLFFPSREVIFYDLKAQTDHAQQERMETLQKI-VVVASIESLLLKLIPPALYKKDQISFKVGESIDLEKVTETFVKQGYERVEQVEGNGQFSIRGGIIDIYSGGEISPYRIELFDDEVDSIRQFQVDTQRSTQKVQELLIYPVAETIIEPSHFNGVEQYAPYLYSLLDYLNPNALDELKSLQYKGYKIVLLPGTKERALRLLELLREIMQGSINRGFEYSSYMTITDYEIYGVDAVSIKSFVDLQVGDHVVHEGHGIGKYIGIEELSVEGIKKDYIKIRYSGEDHLYVPTDQMNLIQKYIGSDKGSPKLNKLGGVEWVKTKGKVKKAIEDMAEELLKLYAERRRNKGHAFGNDGEWQKQFEDLFPYEETPDQLKSIEEVKADMEQEGAMDRLLCGDVGYGKTEVAIRAGFKAVMDSKQVAFLVPTTILAQQHFNNFKQRFSGFPVTVEMLSRFKTPAQQKQVLEGVRTGNVDVLIGTHRLLSKDIEFKDLGLLIVDEEQRFGVKHKERMKQMKESIDVLTLTATPIPRTLHMSMVGIRDMSVIEDPPEERFPVQTYVIPYNESMIIDAITKEMARGGQTYYVYNRVDGIHQVARKLQELIPEARVAVGHGQMGERELEMLMMDYLDGVYDVLVCTTIIETGLDISNVNTIMIHDADKLGLSQLYQLRGRVGRSSQQGYAYLMYQRDKILSEVAEKRLKAIKEFTEFGSGFKIAMRDLEIRGAGNLLGSQQHGHMASIGYDLYIKLLEETMAEMK-GEDTNMELNVNAYIPERFIGSSTHKIEIYKKIASIRNQEDLYAIEEEIEDRFGDIPMSVRNLLMISYIKALGNQIRVQTITQKEKEIRIQFTR
>P641248896 YP_001514169 Clos_2642 transcription-repair coupling factor [Alkaliphilus oremlandii OhILAs]
GLNDTQKSHIAYGIQDQVCIVTYNEMEARQIYEDLKFYAGDR-AIFLPSKEIMFYNMEATSRNAQEERMKAIETI-IVVTAIDTFLRLMPPPSAYTKNQISFQVGDTVDLEKVIENLVMQGYEREDIVEERGQFSIRGDIIDIFPSSAEMPVRVELFGDEIDSIRNFQPATQRSLDKIEAVKVYAAKETTIESFNFRGVEKLLPYIYCLLHYFKDNALKEIQRLQYKGYKIALIPGTKERCLKLLEFLREILSGNLRRGFEYVKFAVITDYEIYGVDASPIKSFIDLKVGDYVVHEGHGIGKYIGIEELKVEGVKKDYLKIRYSGEGFLYVPTDQMDLIQKYIGSDDAPPKLNKLGGSEWAKTKTKVKKAIEDMAGELIKLYAEREKTKGHAFSPDSDWQKQFEELFPYEETPDQLRCIEEVKQDMEKERAMDRLLCGDVGYGKTEVAIRAAFKAVGDSKQVAFLVPTTILAQQHYNTFKQRFSDFPITVEMLSRFKNATAQKKIIENIRTGNVDIVIGTHRLLSKDIEYKDLGLLIVDEEQRFGVKHKEALKKLKKSIDVLTLTATPIPRTLHMSMIGIRDMSVIEDPPEERFPVQTYVLGYSESMVVDAISRELARGGQVYYVYNRVQGIHQVANNLKELVPQGRVAVAHGQMSERELEKIMLEYMNGEYDILVSTTIIETGMDISNVNTIIIQDADKLGLSQLYQLRGRVGRSYRQGYAYLMYEKDKILSEVAEKRLKAIKEFTEFGSGFKIAMRDLEIRGAGNLLGGEQHGHMAAIGYDLYVKLLEETVGEMR-GEDTTIELNVNAYISEKYIGNPSHKIEIYKKIASIRNKEDMYRVEEEIEDRFGDIPLSARNLLLISYIKSLAKGLKVTAITQKDKEIRIQFKD
>P638136975 YP_752801 Swol_0073 Transcription-repair coupling factor - superfamily II helicase [Syntrophomonas wolfei wolfei Goettingen]
GLSGSAKAFMLSEILKKLLCLLPEEEKAYDLARDLEAFIEPGRLFMFLARDFYFAKENLSTLEV-GRILSLQHCLAIIIATPGSFIYPLPAPSAMRESSLLLQQGKEKEQREILKKLVGGGYRRVDTVSRQGEFAVRGGIIDIFPLGHKEPCRVEFFGELIESIHRFDINSQRRLGKDEQVKILPADEL---------------YGDSIFSYLDESSSARINDWQGKGLKVILAIKSRVAREQIQQDLLEYLDKIVEKGFSSSTVALLSESDIWGKGEERIL-LEDLKLGDYVVHESYGIGIFRGVSQVENSGITREYILLEYAGTDRLYLPLEKLDLLFKYTSSGDKEPRLNKLGGSAWERTRKKVAQSIQDLAEDLLQLYAHRESREGYAFSPDTPWQSQFEDEFPFRETPDQLKAINEVKKDMETRRPMDRLVCGDVGYGKTEVFLRAAFKAIMDGKQVAILVPTTVLAEQHFQTFTERFAAYPAVIEVLSRFRSNSEQKRIVEDLQKGVVDIVIATHRLLSRDVKFKDLGLLVIDEEHRFGVAQKEKIKALKELVDVISLSATPIPRSLHMALTGLRDLSVIETPPPERYPITTYVLEYNEEIIVEAVMKEIERQGQVFFVHNRIEDIYRVKEQLDELFPGIKIAVGHGRMKEDELSRVMMDFVNGKYQLFLCTTIIESGLDMPNVNTIIVDEADKMGLAQLYQLRGRVGRSHRLAYAYLTYRPDWVISEASQKRLNAIREFNELGSGMKIALRDLEIRGAGNILGAEQHGYIQAVGFDLYCRLLEQETGRLK-GVDPQLDIDIDYYIPESYIPDSGSKMRIYRRLLLAGSQEEVEEIREEIRDRFGPLPQAVENFLQIAALRLLARDKEIKSLRRKGRQIEIQTLQ
>P643715019 YP_002572535 Athe_0638 transcription-repair coupling factor [Anaerocellum thermophilum Z-1320, DSM 6725]
GVGEMGKALVVKYLCEKALFITTQRAKL-EWERRFKNLFSS--VVNLQERENPYVVSFAKSRDSEITRIEQFVKI-VLILTAQNLFEKYTD---LKLDCILLTEGLDIQLETLIGKLLTFGYERVKTVEKKGQFSQKGGIVDIYPVASTYPVRIEFFGDTIDTIRLFDVETQKSFEKKDSIKIYKAIEWDLQED----VERLYPYYYSVIDIFSE-CLDDLKYYMSKRYTINIFTGSRTSLEDLADALLKLIARSIEKGIEVQDLVYLS---FFHLKKDAFYTIEDLKPGDFVVHRTHGIGKFLGFEKITVEGTTKEYVKLEYANSSYLYVPTTNLDVIEKYIGTDDVQPKLSKLGSQEWQKQKQKVRKSLEIVAKDLVELYAKRQLGKGFKFSKDTLWQKEFEEKFPYTETEGQLQAIEEIKRDMESEKPMDRILCGDVGYGKTEVAMRAAFKAVMDSKQVAVLVPTTILAQQHYMTFSARMKDFPVTIEVLSRLKSETQQKKIVRGLREGTIDIVIGTHRLLSSDVKFKDLGLLIIDEEHKFGVEAKEKIKKLKTNVDVLTLTATPIPRTLNMALLGIRDLSVIEDPPEDRFPVQTFVLEYNERIIKEAILREISRGGQVFYLYNRIKDIQEVAAKLQNLVDDIKVACAHGQMPEEELERVLLDFIEGRYNVLVCTTIIESGVDMPNVNTLIVEDSDRLGLAQLYQLRGRVGRSSRLAYAYFTFRKDKVLSEQAQKRLAAIKEFTELGAGFKIAMRDLEIRGAGSLLGKLQHGHINSVGYDMYIRLLSEEIRRLK-GIEPQIDVKVSAFISSSYIDDEKERINMYKKISSIESKDDVNDIYDELIDRFGDVPKEVDNLIKVAYLKCLCKKAGIISILQFQESLFKQFLN
>P640495548 YP_001180000 Csac_1206 transcription-repair coupling factor [Caldicellulosiruptor saccharolyticus DSM 8903]
NLGEMGKALLVHAICQKVLFITHQKSKS-EWEKRFKNLFDK--VIVLQERENPLINSFAKSKDSEIQRAEEFVRI-VLILSPQNLLEKYSD---FKFESLILEENKELGFEEFLTTLTRYGYERVKVVEKKGQFSQKGGIVDIYPIFSKYPVRIEFFGDTIDTIRYFDVETQKSFERVCYVKIYKACEWDLSID----IDRLYPYYYSIFDIFGD-CFEDIKYYQSKGYLINVFAGSETSLEDLKSELEKLLPRSVEKGIEIQNWVCLS---FFNVKKETFYTIEDLKYGSYVVHRTYGIGKFLGFEKITVEGVTKEYLKLEYANNSYLYVPTTNLDVIEKYIGTDDSEPKLSKLGTLEWQKQKQKVRKSLEVVAKDIVELYAKRQLKKGFKFSPDTIWQKEFEEKFPYTETEGQLQAIEEIKKDMESEKPMDRILCGDVGYGKTEVAMRAAFKAVMDSKQVAVLVPTTILAQQHYMTFVQRMKDFPITIEVLSRLKSESQQKKILKALKDGTIDIIIGTHRLLSNDVKFKDLGLLIIDEEHKFGVEHKEKIKKLKENVDVLTLTATPIPRTLNMALLGIRDLSIIEDPPEDRFPVQTFVMEYNEKVIKEAILKEVSRGGQVFYLYNRVKDIEEVVNRLQALLGEIKIAYAHGQMDERQLEEVLIDFINGKYDVLVCTTIIESGVDMPNVNTLIVEDADRLGLAQLYQLRGRVGRSNKLAYAYFTFRKDKVLSEEAAKRLSAIKEFTELGSGFKIAMRDLEIRGAGSIVGKLQHGHINAVGYDMYIRLLSEEIRRLK-GIEPQIDIRVNAYISSEYIDDDKERINMYKKISSIDTKEDVQEIYDELIDRFGDIPKEVDNLIKIAYIKFLCKRLGILSISQNDSEVKLQFVA
>P643560034 YP_002456636 Dhaf_0131 transcription-repair coupling factor [Desulfitobacterium hafniense DCB-2]
NLTGSQKPAFAAQLIQPGLIITYSEELAQKWVNDLRSWLPGEDVLYFPSSEWLPFEVLGKSRETTIERIRVLNRL-TVVVPALAVNQRSFSRRRWQEYILELKEGTSYDLKDLAQKLSTAGYERLDVVDGKGQFAIRGGIMDIAPLDGE-PLRVEFFDDEVDSIRVFDLETQKSTETLKSVKIPPALEVVIRPEVDESIYPYLSLLEPFFSLLSQDHYDEIEHWQKSGHIVNLFVGDEEHAERMLQGLRDVYSSSLDQGFELPLLIVLSEAEIYKRKTGQRLQFADLKPGDFVVHVHHGIGQFMGIERIAVGGVEKDYFSVKYAGQDKLYVPLDQLNFLQKYLGSDAETPKLYKLGGSEWKKVKAKAKSAIKEMAFDLVKLYAQREATKGYAFSPDNVWQQEFEEKFPYQETPDQMQCIVEVKQDMMRQRPMDRLLCGDVGYGKTEVALRAAFKAVMDSKQVAVLVPTTILAQQHFNTFQERFMGYPVSIQMLSRFRSAKEQKLILQGLKEGSIDIVVGTHKLVSDSIKFKDLGLLIVDEEQRFGVAHKEKLKTLKANVDVLTLSATPIPRTLHMSLVGVRDLSIIETPPEDRFPVQTYVAEFRPDVVREAIRREIQRGGQVFFVHNRVEDMEQVVHFLSQLVPEARYGIAHGQMSEKELEQEMLAFLEHESDVLVCTTIIETGLDMPNVNTLIIDEADRLGLGQLYQLRGRVGRSNRRAYSYFLYKPQKVLTEVAEKRLAAIREFTEFGSGLKIAMRDLEIRGAGNLIGAQQHGHLAALGFELYSQMLKEAVQELK-GIETSIEVQVDAYLPDIYIGERQLKAALYQRMVAIDNEEDLSMMIDELIDRFGTPPREVENLLKIVRIKWMASGMKIEQIQQLKQQMVFRFAA
>P637909895 YP_516422 DSY0189 hypothetical protein [Desulfitobacterium hafniense Y51]
NLTGSQKPAFAAQLIQPGLIITYSEELAQKWVNDLRSWLPGEDVLYFPSSEWLPFEVLGKSRETTIERIRVLNRL-TVVVPALAVNQRSFSRRRWQEYILELKEGTSYDLKDLAQKLSTAGYERLDVVDGKGQFAIRGGIMDIAPLDGE-PLRVEFFDDEVDSIRVFDLETQKSTETLKSVKIPPALEVVIRPEVDESIYPYLSLLEPFFSLLSQDHYDEIEHWQKSGHIVNLFVGDEEHAERMLQGLRDVYSSSLDQGFELPLLIVLSEAEIYKRKTGQRLQFADLKPGDFVVHVHHGIGQFMGIERIAVGGVEKDYFSVKYAGQDKLYVPLDQLNFLQKYLGSDAETPKLYKLGGSEWKKVKAKAKSAIKEMAFDLVKLYAQREATKGYAFSPDNVWQQEFEEKFPYQETPDQMQCIVEVKQDMMRQRPMDRLLCGDVGYGKTEVALRAAFKAVMDSKQVAVLVPTTILAQQHFNTFQERFMGYPVSIQMLSRFRSAKEQKLILQGLKEGSIDIVVGTHKLVSDSIKFKDLGLLIVDEEQRFGVAHKEKLKTLKANVDVLTLSATPIPRTLHMSLVGVRDLSIIETPPEDRFPVQTYVAEFRPDVVREAIRREIQRGGQVFFVHNRVEDMEQVVHFLSQLVPEARYGIAHGQMSEKELEQEMLAFLEHESDVLVCTTIIETGLDMPNVNTLIIDEADRLGLGQLYQLRGRVGRSNRRAYSYFLYKPQKVLTEVAEKRLAAIREFTEFGSGLKIAMRDLEIRGAGNLIGAQQHGHLAALGFELYSQMLKEAVQELK--IETSIEVQVDAYLPDIYIGERQLKAALYQRMVAIDNEEDLSMMIDELIDRFGTPPREVENLLKIVRIKWMASGMKIEQIQQLKQQMVFRFAA
>P643612572 YP_002509860 Hore_21200 transcription-repair coupling factor [Halothermothrix orenii H 168]
GMPGNRFAFITGNILQTVLMVTYDTVHLNRYYEDLIRMMPEEKVLLYPESEVLPHEQIVPDLAETAQRIRVLQSVAVLLTTATALLRKMIPVSTFKKYIFSLQVGQEIDLNKFTEKLRISGYNRVEMVENPGEFSIRGGIIDIFPLSVNKPFRIELFGDEIDTIREFEPATQRSRRSLEKVFISPAREIIVSPRDFPGSEQFLPYYYTLIDYLPDDSVERVRELVDTGYRVFVTLNSSNKARRVVNYLKEVMPGSLSEGFIIDDLALFTEKEVLGNNGVKISSIDELQVGDYVVHENHGIGKYLGVKTLAVQGQHKDYLVLKYAGEDKLYVPTDQFNLVQKYIGADNKPPKLYKLGGNDWKKVKQKVKESVKEMAIGLLELYAERETIKGYSFSDDTVWQKEFEEAFPYEETPDQLKAIEEVKNDMESATPMDRLLCGDVGYGKTEVAIRAAFKAVMDGKQTAVLVPTTILAQQHYNTFSERMKNYPINIEMISRFKTPAEQREVLKKLAAGEVDIIIGTHRLLSRDVVFNDLGLLIIDEEQRFGVSHKEKIKDLKRNVDVLTMTATPIPRTLHMALVGVRDMSVIETPPENRYPIRTYIREFNKELIRDAVRKELGREGQVYFVHNRVEDIQEQATMIKKLVPECRVAVAHGQMNEHKLERLMLDFYNHQYDVLVCTTIIETGLDIPNVNTIIVNRADQMGLAQLYQLRGRVGRSNRIAYAYLLYEKDRVLPEVAEKRLRAIKEFTNLGSGFKIAMRDLEIRGAGNLLGPEQHGHIASVGFSLYCKLLEGAVEELK-GTRVEIELDIDAYLPDEYITDSRQKIDIYKKIMALKDFEEVEDMIDELIDRFGDPPEPVLNLLGISKLKVKASKLGIDKISRNKKFVEFRFMK
>P637539793 YP_077061 STH3235 transcription-repair coupling factor [Symbiobacterium thermophilum IAM 14863]
GVAGSLKSAFLAALREPALVITATIQQAEQFREDLETWLPGQDVALFPPMEYLPFEVMAHSPEVIGQRLSVLERL-IVVAPAAALYRGLTPSAVFRRSLLTLRPGQAIGRDELVARLVRQGYERVDMVESKGHVAVRGEIVDLFPLAAEYPLRVAFWGDEIEEIRRFDPATQRTVEQVDALSVGPAREFILPEDYFPGLEQYATFFYTLIDYFPERPLEELRRWKKQGFRIVILVGTEDRQRRIRELLQEVGLGSLEGGFQWPGLVVVTDREIQGRQGARIASYQDLQVGDYVVHATHGIGRYLGVRSETILGVTRDYLVIQYEGSDRLKIPTEQVDQIQKYIGAEGHEPRLNRLGGGEWAKVKSRVKESIREMAAELLRLAALRETLPGTAFPPDTPWQREFEDAFPYEETPDQLTAIAEIKADMEKARPMDRLLLGDVGYGKTEVALRAAFKAATAGKQVAILVPTTILAQQHYATCKSRMEGFPINLAVLNRFKSPKEQAEIIRGLAEGTIDVVIGTHRLLSDDVKFKDLGLLIVDEEQRFGVAHKERIKQLRANVDVLTLSATPIPRTLHMAMVGLRDMSIITTPPEDRYPVETFVAEYDDALVQDAIGRELSRGGQVFYVHNRIQTLDDVAARLHRLVPEARIAVAHGQMSEDRLEKIVLDFMDGEYDVLVATTIIENGIDMPQVNTIIVEDADHLGLSQLYQLRGRVGRSNRLAYAYFLYRRDKVLTEASEKRLRAIKDFTELGSGFKIAMRDLEIRGAGNILGPEQHGFIVSVGFDLYCQLLEEAVRELKGEIQPNIELQVDAFISDQYVPDARQKIDAYKRIIAIRSMADVEDVADELVDRFGSLPDPVKNLLDIARLRVHCNRLGITSIAQMRDRVTVKFLP
>P637264037 NP_624085 TTE2565 Transcription-repair coupling factor - superfamily II helicase [Thermoanaerobacter tengcongensis MB4]
GLADSQKAHIAHYLMKKVLVITPDDVEARRIYEDLYSFNEGE-ASLFPKRDIVFYKIDAASHEIVFERLKVIKRL-AVVASVDALLDKMPPFYLFRKYQFSLKIGDKIDLGKFLKKLEVMGYERVQMVEGKGQFSVRGGIIDIFPSTEEYPFRIELFDDEVDSLRTFDVMTQRSIKTAEEVFIFPATEFIVEEEKRESIKVLINYFYSIKDYVGEDAIEDLKYYKATGYRVLLLSGNKDRAKILKETLEEIYPASITKGFEYVDFAVISDSEIFGQNAERIKSFTELEVGSYVVHVNYGIGKYEGIEKIKVDGVIRDYLKIVYAGGDVLFVPVEQLDLVQKYVGPTDNPPKLNKLGGGEWIRAKRKAKKAAEDLAKDLIELYAKRQMAKGHAFSPDTPWQKEFEDQFPYEETEDQLRCIKEIKEDMEKDKPMDRLLCGDVGYGKTEVALRAAFKAVADGKQVAFLCPTTILAYQHYTNFLERFKEFPVKIEMLSRFRTPKEQAQIIKGLADGTIDIVVGTHRLLQNDVKFKDLGLLIIDEEQRFGVVHKEKIKKLKENIDVLTLSATPIPRTLHMSLIGIRDMSILENPPEDRFPVETYVVEFNEELIKDAILREVGRGGQVYFVYNRVQGIEKMANFIKELVPNCRIAVAHGQMEENKLEQVMVDFLKGEYDVLVTTTIIETGLDIPNVNTIIVYDADKLGLAQLYQLRGRVGRSNRLAYAYFTYRKDKVLSEVAEKRLEAIKEFTEFGSGFKIAMRDLEIRGAGNLLGAEQHGHIDAVGYDLYLKLLEEAIRNLK-GITTTIDLKVSAYIDSSYIEDENLRLEMYKKIASIESREDMMEVAEELIDRFGDYPKPVEALLDIAYIKAVASKLHMVEISEKSSGVILKFKD
>P641542930 YP_001664178 Teth39_0169 transcription-repair coupling factor [Thermoanaerobacter pseudethanolicus ATCC 33223]
GLTDSQKAHIAHYIMTKVLVIAPDEVEARKIYEDLYSFNFGN-ASLFPKREALFYKIDAASQEVVSQRLQVIKKL-AVVTSIDAAVGKLIPMDLFKKYQFVFKLGDTVNLEEVIKSLVTMGYERVQIVEGKGQFSVRGGIIDVFSPTEEYPYRIELFDDEIDSIRTFDVITQRSLENIDKINIFPATEFIAEAERVENIYELIDYFYSIVDYMGEDAVDDLKYYKNAGYKVLLLSGNQERARILKDTLDSIYAASVSKGFEYVDFAVISDGEIFGQNADKIKSFTELEIGSYVVHVNYGIGKYEGIEKIKVDGIVRDYLKIIYAGGDTLFVPVEQLDLVQKYVGPTDNPPKLNKLGGSEWLRAKRKAKKAVEDLAKDLIQLYAKRQMVKGHAFSPDTPWQKEFEEQFPYEETEDQLRCIKEIKEDMEKDRPMDRLLCGDVGYGKTEVALRAAFKAVADGKQVAFLCPTTILAYQHYANFIERFKEFPVKIEMLSRFRTPKEQSKIIKELAEGNIDIIVGTHRLLQNDIKFKDLGLLIIDEEQRFGVVHKEKIKKLKENIDVLTLSATPIPRTLHMSLIGIRDMSVLENPPEDRFPVETYVVEFNEELIKDAILREIARGGQVYFVYNRVNGIEKMASFVKDLVPGCRVAVAHGQMEESQLEKVMIDFLNGEYDVLVSTTIIETGLDIPNVNTIIVYDADKLGLSQLYQLRGRVGRSNRLAYAYFTYRKDKVLSEVAEKRLEAIKEFTEFGSGFKIAMRDLEIRGAGNLLGAEQHGHIDAIGYDLYLKLLEEAIRNLK-GITTTIDIKVNAYIDSSYIEDENLRLEMYKKIASIKSREDMIEISEELVDRFGDYPKPVEALLEIAYLKAIASQVNITEITEKGNSVILKFND
>P641540939 YP_001662237 Teth514_0593 transcription-repair coupling factor [Thermoanaerobacter sp. X514]
GLTDSQKAHIAHYIMTKVLVIAPDEVEARKIYEDLYSFNFGN-ASLFPKREALFYKIDAASQEVVSQRLQVIKKL-AVVTSIDAAVGKLIPMDLFKKYQFVFKLGDTVNLEEVIKSLVTMGYERVQIVEGKGQFSVRGGIIDVFSPTEEYPYRIELFDDEIDSIRTFDVITQRSLENIDKINIFPATEFIAEAERVENIYELIDYFYSIVDYMGEDAVDDLKYYKNAGYKVLLLSGNQERARILKDTLDSIYAASVSKGFEYVDFAVISDGEIFGQNADKIKSFTELEIGSYVVHVNYGIGKYEGIEKIKVDGIVRDYLKIIYAGGDTLFVPVEQLDLVQKYVGPTDNPPKLNKLGGSEWLKAKRKAKKAVEDLAKDLIQLYAKRQMVKGHAFSPDTPWQKEFEEQFPYEETEDQLRCIKEIKEDMEKDRPMDRLLCGDVGYGKTEVALRAAFKAVADGKQVAFLCPTTILAYQHYANFIERFKEFPVKIEMLSRFRTPKEQSKIIKELAEGNIDIIVGTHRLLQNDIKFKDLGLLIIDEEQRFGVVHKEKIKKLKENIDVLTLSATPIPRTLHMSLIGIRDMSVLENPPEDRFPVETYVVEFNEELIKDAILREIARGGQVYFVYNRVNGIEKMASFVKDLVPGCRVAVAHGQMEESQLEKVMIDFLNGEYDVLVSTTIIETGLDIPNVNTIIVYDADKLGLSQLYQLRGRVGRSNRLAYAYFTYRKDKVLSEVAEKRLEAIKEFTEFGSGFKIAMRDLEIRGAGNLLGAEQHGHIDAIGYDLYLKLLEEAIRNLKG-ITTTIDIKVNAYIDSSYIEDENLRLEMYKKIASIKSREDMIEISEELVDRFGDYPKPVEALLEIAYLKAIASQVNITEITEKGNSVILKFND
>P641558599 YP_001679845 HM1_0721 transcription-repair coupling factor [Heliobacterium modesticaldum Ice1]
GLSASQRTALMATMARPLCVVTHSIQQARRIAEDLQVLLPDEEVLSFPATEVMPYEVLTSSHELLAQRLDVLSRL-TVVTTIDALMKKLVPPAVMAEADLEFIVGCRMELSHIQERLHYLGYQRTPMVEAPGQYSLRGGILDVYPLTRSLPARIEFFDDEIDSIRLFDVETQRSKEKQDRYAAGPAREMLLAAEWVEGLEQFQNFFYSLFSYLHPETIEELKNYKKRRMAVLILAASTVRRDRICDALRDVGVGQLEAGFELVQLVLITDLEIFGREGQRIDSFVDLALGDYVVHVNHGIGRYMGVEKLEVGGVHKDYLVIRYAGEDRLYVPTDQVHLIQKYVGAEGVAPKLYRLGGNEWHKVKQKVKDSVRELAGDLLKLYAARESKPGYAYSADTPWQKEFEEAFPYEETPDQARSIAEVKTDMEKAKAMDRLLCGDVGYGKTEVAIRAAFKAVQDGKQVAILVPTTILAQQHYNTFRERFSGYPVRVDVLSRFRSPKEQKASLEGLKSGEVDIVIGTHRLVSNDVSFKDLGLLIIDEEQRFGVAHKEKIKHLKENVDVLTLSATPIPRTLHMSLVGLRDMSIIETPPEDRYPVQTYVVEYNPELIREAVRRELNRGGQVYYVRNRIEDLDRIARDLGALVPDARIVVGHGKMREDQLEQVMLDFLEGEYDILVCTTIIETGLDIPNVNTLIVDGADLMGLSQLYQLRGRVGRSNRLAYAFFTYRKDKVLTEVAEKRLHAIREFTELGSGFKIAMRDLEIRGVGNLLGPEQHGQMASVGFDLYCRLLEEAIQELK-GPETFVDIRVDAFIPDGYMADSLSKVQFYKRLLAARTVDQVEALEEEMEDRFGDPPEPVENLVSLSRIKAYGQQAGVSAVQQEKEELRIRFFP
>P637828013 YP_428963 Moth_0081 transcription-repair coupling factor [Moorella thermoacetica ATCC 39073]
GLPEGMKGLWLAAMLDPILVVTPGSEEAQRLAADIESFWPGEGIDYLPPSELLPLEVYTPSPELAAQRLKVLTNL-ILVVPVEDLLRKLPPPDTLRHSLQSLEVGQIIDREALLQKLTGLGYRREEVVEAPGQLAVRGGIIDIFPLGAEEPVRLELFGDEIDSLRRFDPVSQRSVADLRAIVVGPAQEVLPPPDWPGGSSQLQPFFYTLFEYFQRQPLEELTRWRREGYRIILMVADPNRVVALRQALAEMVSGRLRQGFTWPELAIIGDTEIYGPEGSKISSFTDLKEGDYVVHVHHGIGRYLGLQQLDVGGVKKDYLLIQYAGKDRLYVPVDQVSLVQKYVGGEGHVPRLYRLGGNEWNKVKSRVQEAVQEMAQELLDLYARREAIPGHAFGPDTPWQREFEEAFPYTETPDQLRAIAEVKADMEKPRPMDRLLCGDVGYGKTEVAMRAAFKAVMDGMQVAVLVPTTILAQQHYETFKARFAPFPVKIAVLSRFCSPREQKVVVEALKRGEVDIVIGTHRLLSSDVNFKNLGLVIIDEEQRFGVAHKEKLKQLRYSVDVLTMTATPIPRTLHMSLAGVRDMSMIETPPEDRFPVQTYVVEYNPELVREAIRRELDRGGQVFIVHNRVQDIDRFAYHIQQLVPEARVGIGHGQMGEEELENVMLDFISGRYDVLVSTTIVENGLDIQNANTLIVDESDNFGLAQLYQLRGRVGRTNRLAYAYFTYRPDKVLGEIAEKRLAAIREFTAFGSGYKIALRDLQIRGAGNFLGPEQHGHMVAVGFDLYCQLLEEAVRKLKEQQATPIELSVDTFLGDNYIPEATLKMELYHRLMNAGDLAAVEDIAAEMEDRYGPPPPEARNLLALTRVRILAREVGVISVNQKNREVELSFGQ
>P640770291 YP_001307232 Cbei_0086 transcription-repair coupling factor [Clostridium beijerinckii NCIMB 8052]
GASESGRGYIISGIFESIVVVTQSDMEAKNLYEDLIFYTSE--VYYFPVKEMVFYNIDAISGDLRWARLKVINEI-IIVTSIEAFAAKYTPHNLFLEYSMKFKEGDEVNLADISKKLIQSGYERVEMVEGKGQFSLRGGILDVFPTGSTYPYRVELFGDEIESIRTFNTESQRSIEKVKKIDIFPAKEVIVSEESFETIDSYLPYFTSLFDYFKN-YFDEILGKKNLGYKTLILSGTRARGERLVGTLRDITFGNQLRGFEYPQVCIISDKEVFGAGISKIKSFAELKPGDYVVHANHGIGVYKGIKQIDVGGHKRDYLDIVYDKGDKLYVPVDQLDLIQKYIGSEGKSPKVNKLGSAEWQKAKAKARKSINEIAEDLVKLYAMRSTVKGHKFSKDTEWQKQFEDEFPFEETPDQLTSLEEIKIDMESDKPMDRLLCGDVGYGKTEVAIRAAFKAVMDGKQVALLVPTTILAEQHYKNIKNRFSDFPIKIDMVSRFRTAKQQKEILQKVKEGNLDILIGTHRLVSKDIQFKDLGLLIVDEEQRFGVKQKEKIKGIKKNVDVLTLSATPIPRTLHMSLSGVRDISVIETPPEERYPVQTYVVEQNDQLIRDAILREIGRGGQVYFVYNRVEDIERMAKYVQSLVPESKVGIAHGQMAERQLEKEMFDFMSEEYNVLVCTTIIETGMDIQNVNTIIIYDADKMGLSQLYQLRGRVGRSNRIAYAYLLYTKDKVLTEVAEKRLKALKDFTELGSGFKIAMRDLEIRGAGNMMGSSQHGHMASIGYDLYCRMLEDTVKLLK-GIETTLDIKVDAFISENYIEDEIQKIEVYKKIAAIEGLDDYSDIKEELEDRYSKIPEPVYNLMDIAYIKSRAKSIFIEEIKETPKELLFKFSQ
>P638083675 YP_697172 CPF_2807 transcription-repair coupling factor [Clostridium perfringens ATCC 13124]
GLSDSGKSYFINGIYEPIVVVTHNDIEARNIYEDLSFYLPN--VYYLPSREIVFYNIDAISGDLRWARLKVIKEM-IIVTSIDAFAATYTPKELYKSHILKIKVGDEVDFKEISHKLIESGYERLETVEGKGEFSLRGGILDVFPPNSANPFRIELFGDEVDSIRTFNVESQRSIEKVKRAEIFPAKEVILSKESFETIDSYLPFFFTLFDYLNN-YTDDIKENKKNGFRTLILSGTRPRGERLVNTLREITFGEQNKGFEYPDLCLISDKSVFGEGVSKIKSFAELKPGDYVVHVNSGIGVYKGIKQIEVQGHKRDYLDIEYSKGDKLYVPVEQLDLVQKYIGSDSASPKISKLGGNEWQKAKAKVRKSINDIAGDLVKLYAERSTVKGYKFSKDTQWQKQFEDEFPYEETPDQLSAIEDIKSDMETNKVMDRLLCGDVGYGKTEVAIRAAFKAVMEGKQVAFLVPTTILAEQHYKNMKKRFAGFPITIDMISRFRTKKQQTETLKALKEGNVDILIGTHRLVSKDIQFKDLGLLIVDEEQRFGVAQKEKIKSFKKNVDVLTLSATPIPRTLHMSLTGVRDISVIETPPENRYPIQTYVVEQNDQLIRDAILREINRDGQVYFVHNRVESIQEVANYIQELVPECKATVIHGQMTERQLETEMIDFMERKYDVLVCTSIIETGIDISNVNTMIVNDADKMGLSQLYQLRGRVGRSNKVAYAYFLYQRDKVLTEVAEKRLKALKDFTELGSGFKIAMRDLEIRGAGNMMGSAQHGHMAAIGYDLYCRMLEDTIKIVKGEVETTVDLKVDAFIPSSYIKDEIQKIEVYKKIAAIENEEDYEYVREELEDRFSNIPNTVYNLMDIAYIKSKAKLLNIEEIKEKNEDIIFIFES
>P642567043 YP_699740 CPR_2493 transcription-repair coupling factor [Clostridium perfringens SM101]
GLSDSGKSYFINGIYEPIVVVTHNDIEARNIYEDLSFYLPN--VYYLPSREIVFYNIDAISGDLRWARLKVIKEM-IIVTSIDAFVATYTPKELYKSHILKIKVGDEVDFKEISHKLIESGYERLETVEGKGEFSLRGGILDVFPPNSANPFRIELFGDEVDSIRTFNVESQRSIEKVKRAEIFPAKEVILSKESFETIDSYLPFFFTLFDYLNN-YTDDIKENKKNGFRTLILSGTRPRGERLVNTLREITFGEQNKGFEYPDLCLISDKSVFGEGVSKIKSFAELKPGDYVVHVNSGIGVYKGIKQIEVQGHKRDYLDIEYSKGDKLYVPVEQLDLVQKYIGSDSASPKISKLGGNEWQKAKAKVRKSINDIAGDLVKLYAERSTVKGYKFSKDTQWQKQFEDEFPYEETPDQLAAIEDIKSDMESNKVMDRLLCGDVGYGKTEVAIRAAFKAVMEGKQVAFLVPTTILAEQHYKNMKRRFAGFPITIDMISRFRTKKQQTETLKALKEGNVDILIGTHRLVSKDIQFKDLGLLIVDEEQRFGVAQKEKIKSFKKNVDVLTLSATPIPRTLHMSLTGVRDISVIETPPENRYPIQTYVVEQNDQLIRDAILREINRGGQVYFVHNRVESIQEVANYIQELVPECKATVIHGQMTERQLETEMIDFMERKYDVLVCTSIIETGIDISNVNTMIVNDADKMGLSQLYQLRGRVGRSNKVAYAYFLYQRDKVLTEVAEKRLKALKDFTELGSGFKIAMRDLEIRGAGNMMGSAQHGHMAAIGYDLYCRMLEDTIKIVKGEVETTVDLKVDAFIPSSYIKDEIQKIEVYKKIAAIENEEDYEYVREELEDRFSNIPNTVYNLMDIAYIKSKAKLLNIEEIKEKNEDIIFIFES
>P637178895 NP_349812 CAC3216 Transcription-repair coupling factor, MFD (superfamily II helicase ) [Clostridium acetobutylicum ATCC 824]
GISESGKSYLISGLYEPFLVITDSDSEAKKIYEDLLFYTQS--VYYLPTKEVVFYNIYAVSGDLRWERLKVIRKM-IIVTSVENLAAVYLPVELYKEYTFKLTLGDTVEAKELQKKLVQCGYEHVESVDAKGQFSIRGGIVDIYSPIDDVPYRIEFFGDEIESIRSFNTESQRSIEKVNKIEVFPAKEIILTDEGFETIDTFIPYFYSFFDYLKN-SINDIKELKEEKYRTVILCGTKSKGQRLVETLGDISPGSQLRGFRYPELCVISDKEIFGTGVGKIKSFTELKPGDYIVHVNHGIGVFKGIKQLEVQGHKKDYLELSYAVDDKLYVPVEQLDLVQKYIGSEGKVPKVNKLGSSEWTKAKNKVRKSINEIAEELVKLYAVRTTVNGFKYSKDTVWQKQFEEEFPYNETQDQLLAIDEIKNDMESGKVMDRLICGDVGYGKTEVAIRAAFKTVMDGKQVAFLVPTTILAEQHYNNFKKRFKDFPVEVDMVSRFRSQAQQKATFKALKEGNIDIIIGTHRILNKEITFKDLGLLIIDEEQRFGVSHKEKLKKFKKNIDVLTLSATPIPRTLHMSLTGVRDISVIETPPEERYPVQTYVVEYNDQLIRDAIMREIGRDGQVFFVYNKVESIKEMAANLGKLIPEARIAIAHGQMSERELEKVMIDFMEGNYDILLCTTIIETGIDIQNVNTLIIYNADKMGLSQLYQLRGRVGRTNRMAYAYFTYKKDKILTEVAEKRLKAIKEFTQLGSGFKIAMRDLEIRGAGNIMGSAQHGHMATIGYDLYCRMLEDTIKEIK-GVETTVDLKVDAYIPSLYIEDETLKISIYKKIAAIDSYEEMMDVKEELEDRFSSIPQSVNNLMTIAYLRSIGRQLGILEIKDKMTQLEIKFES
>P639731116 YP_877116 NT01CX_1020 transcription-repair coupling factor [Clostridium novyi NT]
GLSESGRAYFINGIYESIFIFTNSDVEAKNLYEDLSLYVPN--VYYFPNKEVVFYNVYAISGDLRWERLKVIREM-VIVASIETLASTYISPELYKKYTLKVSVGDVIDIEELSEKLIQGGYQRTSIVEGKGEFSIRGGIIDVYSPISSVPYRIELFGDEVDSIRSFNTESQRSIEKSKSIEIFPAKEMILTKESFENIDSFTPYFYTLLDYMND-SLEEINSKKSQGYKILILSGTRPRGERLVDALRDITFGNQSKGFEYPELCVISDKDFFGKGVGKIKSFDELKPGDYVVHTNHGIGVYKGIKQLEVQGHKKDYLELSYNAGDTLYVPVEQLDLVQKYIGSEGKSPKVNKLGGSEWTKAKKKVRKAINEIAEELVKLYAIRSTLKGHKFGKDTVWQKQFEDEFPYDETPDQLTAIQEIKEDMESSKAMDRLLCGDVGYGKTEVAIRAAFKSVMDGKQVALLVPTTILAEQHYTNLVKRFCDFPVKIDMISRFKTSAQVKAILKEVKAGNVDVLIGTHRILQKDVEFKDLGLLIVDEEQRFGVTHKEKIKNLKKNVDVLTLTATPIPRTLHMSLTGIRDISVIETPPEERYPVQTYVVEFNDQLILDAITREMDRGGQVYFVYNRVGSIKEMAAYLAKLVPDAKVGIAHGQMPERELEKVMFDFMKKEYDILVCTTIIETGLDIQNANTMIIYDADKFGLSQLYQLRGRVGRTNRMAYAYLTYKKDKVLTEVAEKRLKAIKDFTELGSGFKIAMRDLEIRGAGNLIGAAQHGHMASVGYDLYCRMLEDTIKLVKGEIETTVDLKVDAYIPGNYIKDEVQKIEVYKKIANIDSKESMMDIQEELEDRFSDIPPSVDNLINIAYIKTIANSLGIVEVKEKPNEVIIKFQN
>P640575167 YP_001256020 CBO3539 transcription-repair coupling factor [Clostridium botulinum A ATCC 3502]
GLSDSGKNYFISNIFASLVIFTHSDVEARKIYEDLSLYTTE--VYYLPTKEVVFYNIYAISGDLRWERLKVINEI-IIVTCIESLESAYIPKELYTKYTFKLSVGDIIEIKLLEEKLIKSGYERVDIVENKGEFSARGGIIDIYPPISSEPYRLEFFDDEIDSIRNFNVNSQRSIEKVNNINIFPAKEIILEEESFENIDTFLPYFYSLLDYIEG-SLEDIKEKKKEKYKILILSGTRSRGERLVNHLRDITFGNQGNGFQYYDLSVISDKDIFGQGTGKIKSFTELKPGDFVVHANHGIGVFKGIKQLELQGNKKDYLELIYHSDDKLYVPVEQLDMVQRYIGSEGKKPKVSKLGSSEWTKTKNKVKKSIEEIAEDLVKLYAIRATLKGYKYSDDTVWQKQFEEEFPYEETPDQLLAIEDIKRDMESPKPMDRLLCGDVGYGKTEVAIRAAFKAVMDGKQVAFLVPTTILAQQHYNNFKQRFSDFPITVDVISRFRTLSEQKATIKSIKEGNVDILIGTHRILQKDIKFKDLGLLIIDEEQRFGVKHKEKMKNLKKNVDVLTLSATPIPRTLHMSLVGVRDISVIETPPEERYPVQTYVVEYNDQLIRDSILREISRGGQIYFVYNRVESIHEMASYISKLVPEGRVQIAHGQMKEKELENVVLDFTENKFDILIATTIIETGMDIKNVNTMIIYDADKMGLSQLYQLRGRVGRTNRMAYCYLTYKRDKILTEVAEKRLKAIKDFTELGSGFKIALKDLEIRGAGNMMGSAQHGHMASIGYDLYCRMLEDTIKLVR-GVETSVELKIDAYIPNTYIKDETQKIEVYKKIASIDSKEEFMDIEEELEDRFSDIPISVYNLMNISYIRSLGKKVDIEEIKEISNEVVFQFED
>P640856899 YP_001392893 CLI_3759 transcription-repair coupling factor [Clostridium botulinum F Langeland]
GLSDSGKNYFISNIFASLVIFTHSDVEARKIYEDLSLYTTE--VYYLPTKEVVFYNIYAISGDLRWERLKVINEI-IIVTCIESLESAYIPKELYTKYTFKLSVGDIIEIKLLEEKLIKSGYERVDIVENKGEFSVRGGIIDIYPPISSEPYRLEFFDDEIDSIRNFNVNSQRSIEKVNNINIFPAKEIILEEESFENIDTFLPYFYSLLDYIEG-SLEDIKEKKKEKYKILILSGTRSRGERLVNHLRDITFGNQGNGFQYYDLSVISDKDIFGQGTGKIKSFTELKPGDFVVHANHGIGVFKGIKQLELQGNKKDYLELIYHSDDKLYVPVEQLDMVQRYIGSEGKKPKVSKLGSSEWTKTKNKVKKSIEEIAEDLVKLYAIRATLKGYKYSDDTVWQKQFEEEFPYEETPDQLLAIEDIKRDMESPKPMDRLLCGDVGYGKTEVAIRAAFKAVMDGKQVAFLVPTTILAQQHYNNFKQRFSDFPITVDVISRFRTLSEQKATIKSIKEGNVDILIGTHRILQKDIKFKDLGLLIIDEEQRFGVKHKEKMKNLKKNVDVLTLSATPIPRTLHMSLVGVRDISVIETPPEERYPVQTYVVEYNDQLIRDSILREISRGGQIYFVYNRVESIHEMASYISKLVPEGRVQIAHGQMKEKELEHVVLDFTENKFDILIATTIIETGMDIKNVNTMIIYDADKMGLSQLYQLRGRVGRTNRMAYCYLTYKRDKILTEVAEKRLKAIKDFTELGSGFKIALKDLEIRGAGNMMGSAQHGHMASIGYDLYCRMLEDTIKLVR-GVETSVELKIDAYIPNTYIKDETQKIEVYKKIASIDSKEEFMDIEEELEDRFSDIPISVYNLMNISYIRSLGKKVDIEEIKEISNEVVFQFED
>P637385069 NP_780906 CTC00194 transcription-repair coupling factor [Clostridium tetani E88]
GLEDSSKSYLIKGVYDPLLILTHSDIEAKNIYEDLFFYEAN--VHYFPSKEVVFYNVDAISGDLRWERLKIIKHI-IIVTSIESIAPICIPLNLYKEYFFKFSIGDVVDYKDLSEKLLKSGYDRVDLVYNKAQFSIRGGILDIFPPTSSEPYRIEFFDNEIDSIRNFNTESQRSIEKVDCIEVFPAKEIILNKEGFETIDSYLPYLYSFLNYFKD-CFEDIEKRKEEKYKIVILAGTRARGERLVDTLRDITFGSQIKGYEYPDLCIISDKEVFGEGFSRIKSFTDLKPGDYIVHVNHGIGVYKGIKQLEVGGHRKDYLELTYYGDDKLYVPVEQLDIVQKYIGGEGKTPKINKLGNAEWTKTKNKAKKSIEEIAEDLVNLYAVRSTLKGYKFSKDTVWQRQFEEEFPHEETPDQITAIEEIKNDMQSNRTMDRLLCGDVGYGKTEVALRAAFKSVMDGKQVAFLVPTTILAQQHYNNLLKRFSDFPINIEMVSRFRTSAQQNATMKALKEGNIDILIGTHRILQKDVQFKDLGLLVIDEEQRFGVKHKEKIKEFKKNVDVLTLTATPIPRTLHMSLVGVRDISIIETPPEDRYPIQTYVVEYNDQLIRDAILRELNRGGQIYFVYNRVENIKEIATHVSKLVPEAKVGIAHGQMKERELEKVVMDFMNKEHDILVATTIIETGMDIQNVNTMIIYDSDKMGLSQLYQLRGRVGRSSRMAYCYLTYKKDKILTEVAEKRLKAIKEFTELGSGFKIALKDLEIRGAGNMMGSSQHGHMASIGYDLYCKMLEDTIKEKK----------------------------------------------------------------------------------------------
>P640857398 YP_001393570 CKL_0152 Mfd [Clostridium kluyveri DSM 555]
GLSESSRSYLIYAVYNPFLIITHSDVEARKLYEDLCFYLPQ--VYYFPTKEVVFYNIDAISGDLRWERLKVIREM-IIITCVESLASVYVPVELYKNYIFKISVGDKVDFKNISEKLIQCGYERMEMVERRGQFSIRGGIMDIYSPISQEPYRVELFGDEVESIRNFNLESQRSIEKMNNIEIFAAKEIIFDRETFESIDSFLPYFYSFLDYAKN-YFEEIKHKKSKSFKILILSGTRARGERLVDTLRDITFGNQLKGFEYPEISVISDKEVFGKGTSKIKSFTELKPGDFIVHVNHGIGVYKGIKQLELQGHKKDYLELVYECEDKLYVPVEQLDMVQKYIGSEGKNPKINKLGSSEWSKVKKKAKKSIEEMAEDLIKLYAIRSTLKGYKYSKDTIWQKQFEDEFPYEETPDQLSTIQDIKMDMESDKVMDRLLCGDVGYGKTEVAVRAAFKAVMDGKQVAFLVPTTILAQQHYNNFIQRFSDFPVKIDMISRFKTAAQQKATIKAVKIGDVDVLIGTHRILQKDVQFKDLGLLIIDEEQRFGVSHKEKIKQIRKNVDVLTLSATPIPRTLHMSLVGVRDISVIETPPDERYPIQTYVVEYNDQLIRDAVLRELSRGGQVYFVYNRVENIKEMASYIAKLIPEGKVAVAHGQMQERELEGIIMDFMQNKYDILVSTTIIETGMDIQNVNTMVIYDADKMGLSQLYQLRGRVGRTNRIAYCYLSYRKDKVLKEVAEKRLKVIKEFTELGSGFKIALKDLEIRGAGNMMGSSQHGHMAAVGYDLYCRMLEDSIKLIKGEVETTVELKVDAYIPDNYIENEVQKIEVYKKIAAISSYEDMLDIKEELEDRFYDIPPSVYNLMDIAYIRSIGKELGIESIKESKNEVVFTFQN
>P643574345 YP_002470592 CKR_0127 hypothetical protein [Clostridium kluyveri NBRC 12016]
GLSESSRSYLIYAVYNPFLIITHSDVEARKLYEDLCFYLPQ--VYYFPTKEVVFYNIDAISGDLRWERLKVIREM-IIITCVESLASVYVPVELYKNYIFKISVGDKVDFKNISEKLIQCGYERMEMVERRGQFSIRGGIMDIYSPISQEPYRVELFGDEVESIRNFNLESQRSIEKMNNIEIFAAKEIIFDRETFESIDSFLPYFYSFLDYAKN-YFEEIKHKKSKSFKILILSGTRARGERLVDTLRDITFGNQLKGFEYPEISVISDKEVFGKGTSKIKSFTELKPGDFIVHVNHGIGVYKGIKQLELQGHKKDYLELVYECEDKLYVPVEQLDMVQKYIGSEGKNPKINKLGSSEWSKVKKKAKKSIEEMAEDLIKLYAIRSTLKGYKYSKDTIWQKQFEDEFPYEETPDQLSTIQDIKMDMESDKVMDRLLCGDVGYGKTEVAVRAAFKAVMDGKQVAFLVPTTILAQQHYNNFIQRFSDFPVKIDMISRFKTAAQQKATIKAVKIGDVDVLIGTHRILQKDVQFKDLGLLIIDEEQRFGVSHKEKIKQIRKNVDVLTLSATPIPRTLHMSLVGVRDISVIETPPDERYPIQTYVVEYNDQLIRDAVLRELSRGGQVYFVYNRVENIKEMASYIAKLIPEGKVAVAHGQMQERELEGIIMDFMQNKYDILVSTTIIETGMDIQNVNTMVIYDADKMGLSQLYQLRGRVGRTNRIAYCYLSYRKDKVLKEVAEKRLKVIKEFTELGSGFKIALKDLEIRGAGNMMGSSQHGHMAAVGYDLYCRMLEDSIKLIKGEVETTVELKVDAYIPDNYIENEVQKIEVYKKIAAISSYEDMLDIKEELEDRFYDIPPSVYNLMDIAYIRSIGKELGIESIKESKNEVVFTFQN
>P641592925 YP_001716272 Daud_0072 transcription-repair coupling factor [Candidatus Desulforudis audaxviator MP104C]
GVGGGHQALVCAALARPLLIITPGEREAAALADDLVTLLPGRGIFVFSAWELLPVQVLAYSREIGVRRMRVLEAL-VVIAPVDALARLLPPSGVLRERIFVLEGGQSWTMGALRGRLLSMGYEAVSQVDTAGQFSIRGGIADLFPYTARYPIRVEFFGDEIASLRTFDPETQRSRAATDRVTVAPATELVVEDDHTPGIEDLLAYFYTLMDYLGPAGVGEIRRRQVAGQRVVLLVGTGERARRLLNSLRQVGVGRLNKGFEIAELAVLTEREIYGKLRRRTLDELNLAPGDFVVHVNHGIGRYHGIVLLEIGEVKREYLLINYLGEDKLYVPTDQLGLVQKYIGAEGETPRCSRLGGSEWARSKKRVREAVREMAQELLKLYAARQSLPGYRFPADNPWQREFELAFPFEETPDQLKAIMQVKKDMERPRPMDRLLCGDVGYGKTEVAMRAVFKAVTDGKQAAVLVPTTVLAQQHLQTFRERFNGYPVVIEMLSRFRSVREQKQVLADLAAGKVDIVIGTHRLVQDDVQFADLGLIVVDEEQRFGVLHKEKLKLRHPNVDVITLTATPIPRTLYMSLVGIRDTSLLETPPLDRFPVQTFVVEEDPVLIREAVGRELARGGQVYFVHNRVFELDRVAGWLQELVPEARIAVAHGQMREDQLEQVMLDFVAGAYDVLVCTTIIETGLDITNVNTLVVKEADQLGLAQLYQLRGRVGRSNRLAYAYFTFRRDRLLGEAAEKRLRAIRDFTDFGSGFRLAKRDLEIRGAGNLLGTEQHGNISVVGFEMYCRLLEESVRELKGEFETVVEVPVTAFLPDDYIPDPEQKVQFYHLLARVQQVEDVDHVAEELRDRFGSPPAPVENLLAIARIRAMAKGFRIKSINGQGRSCRFILGE
>P637752958 YP_359072 CHY_0200 transcription-repair coupling factor [Carboxydothermus hydrogenoformans Z-2901]
GSYGTARTFLMATVAKPLLVITENEQVAREIAEDLEFFLGDKTSRFFYREGFLFDLTVREGGELKASRIELLKRL-HTVVNYEALTRKYPPLQSFARWKRELRVGDVVELEELIRYLSQIGYERVDQVEAPGQFSQRGGIVDVY-VPGEVPFRAEFFGDEIDSLRALDVESQRSQANLNEVVIYPAEVAVAEED--EVIEKLLPYFWSLLDYFGDEYLEDIKNFLANNYRIFILRGREEAAVALKNELLKIGLGVLNSGFEFPQLLVYTDVELAGRLGERAE--EPFSPGDYVVHPVHGIGKYLGIKPVEVGGNVKDYLVIAYQGEDRLYVPPEQVGNLQKYVGVDGEPPKLSRLGGSDWQRVKNRVKAAVREMAEGLLELYAKRMAKPGFAFSPDTVWQKEFEERFPYEETPDQLKAIEEVKRDMEKPKVMDRLLCGDVGYGKTEVALRAAFKAVMDGKQVAVLTPTTLLAQQHYNTFKERFSGYPVEIRLLSRFQTAREQKEIIKELKRGKVDIVIGTHRLLQDDVQFYDLGLMIVDEEQRFGVAQKERLKILTETVDVLTLTATPIPRTLHMALMGIRDLSVLNTPPENRFPVQTYVLEEDPFIIRDAIRRELGRGGQVFFVHNRVSDIDEVAAWVQSLVPEAKVAVAHGQMKEEQLERVMLEFISGKYDVLVSTTIIETGIDLPNVNTLIIKNADRFGLAQLYQLRGRVGRSNRIAYAYLMYEKDKVLREAAEKRLAAIKEFTEFGSGLKLAMRDLEIRGAGNLLGPEQHGHIAAVGFDMYMKLLQETVAELKGQVEPQLELNLTAYIPESYIPDEKQKIEMYRRLSRTRNLEDLEDVVDELIDRFGEIPPEVENLIRLIKIKIVASKLKVKGIFQTDEELKIQFFP
>P640179265 YP_001111486 Dred_0111 transcription-repair coupling factor [Desulfotomaculum reducens MI-1]
GLSGSQRSYLFAGLAHSVLIVTPGETEAGTLADDLATLLPEVSVQPFPVWQLLPYQVLAHSNEVLAQRLRVLEKL-VVVTSVDALLRRLTPPEVFRCAKVKLSLGQQVDLEKLRFELVELGYTRVDLVEGRGQFSSRGGILDIYPMSEALPVRIEFFDDEVDSIRHFEVDNQRSLDKLKEINISPCRELVVTPAPFDGMEQLLYYFYTLLDYFTAAPLDEIRHWRRRGYAITLLVSSEERAANLLKTLKDITVGQMANGFELISLVVITDAEIFGQPDAKMEPLADLKAGDYVVHVNHGIGRYLGVITLDIGALQKDYLQLQYAGEDKLYVPTDQVGMLQKYLGAESDHPKLSRLGGTEWSKAKAKVREAVKDMADELLALYASRQTVRGHAFSKDMPWQAEFEALFPYEETPDQLRAIGEVKQDMEKVRPMDRLLCGDVGYGKTEVALRAAFKAVMDNKQVAVLVPTTILAQQHYNTFRERFANYPIRIEMLSRFRTAKEQRQVLAGLATGEVDIVVGTHRLVQNDIVFKDLGLLVVDEEQRFGVSHKERLKQIRKNVDVLTLSATPIPRTLHMSLVGVRDTSLLETPPEERFPVQTYVLEEDPVLIREAIKRELNRGGQVYFVHNRVMDLDRLAGWLQNLVPEARIGMAHGQMKEDELEQIMIEFMDGEYDVLVCTTIVETGLDISNVNTLIVKDADHFGLSQLYQLRGRVGRTNRLAYAYFLFRRDKVLTEISERRLSAIREFTEFGSGYKIAMRDLEIRGAGNILGAQQHGHIAEVGFDLYCRLLEEAVQEAR-GVETSVEIPVEAYVPDTYVPDGNQKVELYRRLAAMRDLVEISDLEEELVDRYGDLPESVRCLLQVTKLKIMGRGLKVKSISRSQGSFRILFVP
>P640526047 YP_001210667 PTH_0117 hypothetical protein [Pelotomaculum thermopropionicum SI]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GHAFGPDTVWQKELEEAFPYEETPDQLRAVEEVKADMERPRPMDRLLCGDVGYGKTEVALRAAFKAVMDGKQVAILVPTTILAQQHYTTFRERLARFPVNIEVLSRFRTAREQRQVLQGLEQGTVDIVIGTHRLLQDDVRFKALGLLVVDEEQRFGVAHKERLKMIRKDVDVLTLTATPIPRTLHMSLIGVRDTSILETPPEDRYPVQTYVLEEDPVLIREAIRREMNRGGQVFFVYNRIMDLDQVALWLQELVPEARIAVAHGQMKEDELEQVMLDFIDRRYDVLVCTTIIENGLDISNVNTLLVKDANMMGLAQLYQLRGRVGRSNRLAHAYFTFRKDRVLGEAAEKRLAAIREFTELGSGFKIAMRDLEIRGAGNILGAEQHGHIAAVGFDLYCRLLEEAIREAR-GVETSIELPVEAYIPDSYVPDVNQKVEIYKRIAGLVSLDELSDLAEELVDRFGDLPPAVENLLAVAKVKVLAGRFKIKAISLLPGQLRLLFAP
>P641685611 YP_001812548 Exig_0044 transcription-repair coupling factor [Exiguobacterium sibiricum 255-15]
GLMNSGKALFIAGIYQRFVIVTHNMFQAQKLYDDLIELVPEQDVMLYPVDETLAAELSYASPELRATRIETRHRLGILIIPLVGLRRYVPTASDFLDHTKRIKPGDVLSIPDFIQELVDAGYERTATVTTPGEFAVRGSIIDLYPLTVERPYRLDLFDEEVDSIYTFDAETQRSLGVIAEALVPPATEHFATRERPKQLAKYAPLLYTLLDDI-KDAVQEVDRYGRADMWMVFLASNRERAERMRQTLSDILIGGIHGGFEMTNLVVITEEEVFKQNAERIKSYQELKTGDYVVHIHHGIGRYHGIKTIDVAGNHQDYLHLIYAGEDSLYVPVDQIDLIQKYVGAEGKEPKIYKLGGMEWKKVKAKVQKSVEDIADELIKLYAAREAAVGFAFPEDDDSTQAFEASFPYEETVDQLRSIEEIKKDMERPRPMDRLLCGDVGYGKTEVAIRAAFKAVMAGKQVALLVPTTVLAQQHYETMLERFSDWPINVSVMSRFRSAAELKATKKGLKEGTIDVVVGTHRVLSKDVQFADVGLLIIDEEQRFGVKHKERLKQLKTNVDVLTLTATPIPRTLHMSMIGIRDLSVLETPPENRYPVQTYVMEYDGIVMREALERELGRGGQAFFLYNRVEGIERKAEEIRALVPEARVVTAHGRMTETELESQLIAFFEGDADVLVSTTIIETGIDIPNVNTLIVNDADQMGLSQLYQLRGRVGRSSRVAYSYFTYRPQKRLTEVAESRLQAIKEFTELGSGFKIAMRDLSIRGAGNLLGSQQSGFIDSVGFDLYSQMLSEAVEERKE-FVPDFTFSLDAYIPSHYMADSELKIEFYKRLKYVDTPESLESLETEMLERFGEFPTEVARLIQLTRMRIFAERARVERVKTDPK-IEIVLSE
>P643870024 YP_002886056 EAT1b_1685 transcription-repair coupling factor [Exiguobacterium sp. AT1b]
GLTTSAKALVLAGLVKRLVVVTHNMYQAQKMFDQLESLIGPDKTLLYPIDETLAGELSLSSPELLAARIDARTRLGVVVVPLGGLRRYVPSPEAWQDSRVMLKPGSDLDLADFAKQLTGMGYERTATVTTPGEFSVRGSILDVYPLTEARPYRIDLFDTEIDSIFTFDAETQRSLGVVGEVCITPATEFIATENLPEKVGKYSPLLYTLLDYVGKDAVQEVERWQQGDQRIVVLAGDKSRADKIEALLSDVIIGQIEGGFELSTLVVVSEEELFKRNAERIKSYQELKPNDYVVHVHHGIGKYLGIKTIEVGGIHQDYLHLVYAGDDALYVPVDQIDLVQKYVGAEGKEPKIYKLGGTEWKKVKSKVAKSVKDIADELIKLYAAREASVGFAFPPDDEEMGQFESSFPYAETEDQVRSIAEIKADMERSRPMDRLLCGDVGYGKTEVAIRAAFKAVLAGKQVAFLVPTTVLAQQHYETMLERFSEFPINVSVMSRFRSKSEMTATKKGLKEGTIDIVVGTHRVLSKDVTFANLGLVIIDEEQRFGVKHKERLKQLKTNIDVLTLTATPIPRTLHMSMIGIRDLSVLETPPENRYPVQTYVMEYDGIVLREALERELARGGQAFFLYNRVEGIERKAEEIRALLPDARIATAHGRMTESELESQLISFLEGEADILVSTTIIETGIDIPNVNTLIVHDADKMGLSQLYQLRGRVGRSNRIAYAYFTYRKDKRLTEVAESRLQAIKEFTELGSGFKIAMRDLSIRGAGNLLGAQQSGFIDSVGFDLYSQMLSEAIERMR-GFKPEITFQADAYIPDDYLSDSELKIEMYKRFKYVDTPSALFALQDELIERFGEFPEPVALLIQLTRLRIYGELAKVSRIKQTPGRIEIVLSK
>P641573044 YP_001695843 Bsph_0075 Transcription-repair coupling factor [Lysinibacillus sphaericus C3-41]
GLTGSARPVMVDALFEPIYIVSPNLLQAQRMVDELAGLLGEENVHYYPADEFIAADLSVASPELRAERIATLDCLAVYVIPVAGLRKIMQPKEHWLHYFLQTTVGDEIEVDAWLQTLVEMGYVRNSMVTTPGEFALRGGILDIYPPYLASPIRIELFDTEVDSIRTFSADDQRSINKLQKIRILPASEVILTKSLPDYVNKYGSLLYYLGDYFAQDGISEIERWLLGKFTVLIVARDKERVKRVQQMLEEIVDGALSSGFELPLMAIVTEDELFKQNAERIKSYTEIKPGDYVVHVHHGIGKYIGVETLEVNGTHKDYLHIRYRADDKLYVPVEQIDLIQKYVASEDREPKLHKLGGAEWKKAKAKVSSAVQDIADDLIKLYAKREAEKGHAFTPDNDDQRNFEAMFAYEETEDQLRSIVEVKRDMERERPMDRLVCGDVGYGKTEVAIRAAFKAIQDGKQVAFLVPTTILAQQHYETIRERFQDFAINVGLLSRFRSKKEQTATLKGLKEGQVDIVIGTHRILSKDLIFQDLGLLIVDEEQRFGVTHKEKIKQLKTNVDVLTLTATPIPRTLHMSMVGVRDLSVIETPPANRFPVQTYVMEHSGALVREAIEREMARGGQVFYLYNRVEDMARKVEEIQVLVPEARIGHAHGKMSETELESVILSFLEGDYDVLVTTTIIETGVDIPNVNTLIVHDADRMGLAQLYQLRGRVGRSNRVAYAYFMYQRDKVLTDVAEQRLQAIKEFTELGSGFKIAMRDLSIRGAGNLLGAQQHGFIDSVGFDLYSQMLQEAIAERQTGPEIEILLSVDAYIPDVYIPDGYQKIQMYKRIKAMDQVEEYGEIMEELEDRFGDLPIETERLLRVARMKVWGLGAGVISVKEKQKLITILLSE
>P637219998 NP_463745 lmo0214 transcription-repair coupling factor [Listeria monocytogenes EGD-e]
GLTGSSRALFASVVEGPVVFVTHNLYHAQKLYDDLLSLMDVDRLFLYPADELISSELSISSPELRGQRVEALDFLGIVIVPVAGLRKMLPPVSLWKHFNISIVEGEEIDPDVLRQKLVTMGYTMSGMVNTPGEFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRVEEFRLLPATEIILDQSKPDMFFKYIGLAYSLFDYLPKNTATELESWHKNNYAVVILAPNLERAEKMQQTLTDFVIGTFQNGFELPLVAIISETELFNKNAERIQSYSELKVGDYVVHVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDLVQKYVGAEGKSPRLNKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQETEDQLRSISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHFETMKERFQGFPIEIGLLSRFRTKKQQTETLKGMKNGTVDVVVGTHRLLSKDVEYQDLGLLIVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSMLGVRDLSVIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAMVPDARVATAHGQMGESELESVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADRMGLSQLYQLRGRVGRWNRIAYAYFMYQKDKILREEAEKRLSAIKEFTELGSGFKIAMRDLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIEAKK--VPVEIDIQADAYIPEYYITDGRQKIEMYKRFRNIETLSELEDLQSDMIDRFGEYPEEVEYLFTMTELKVRALEVGIESVKQEQNKITMLFSE
>P643456543 YP_002351378 LMHCC_2429 transcription-repair coupling factor [Listeria monocytogenes HCC23]
GLTGSSRALFASVVEGPVVFVTHNLYHAQKLYDDLLSLMDVDRLFLYPADELISSELSISSPELRGQRVEALDFLGIVIVPVAGLRKMLPPVSLWKHFNISIVEGEEIDPDVLRQKLVTMGYTMSGMVNTPGEFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRVEEFRLLPATEIILDQSKPDMFFKYIGLAYSLFDYLPKNTATELESWHKNNYAVVILAPNVERAEKMQQTLADFVIGTFQNGFELPLVAIISETELFNKNAERIQSYSELKVGDYVVHVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDLVQKYVGAEGKSPRLNKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQETEDQLRSISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHFETMKERFQGFPIEIGLLSRFRTKKQQTETLKGMKNGTVDVVVGTHRLLSKDVEYQDLGLLIVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSMLGVRDLSVIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAMVPDARVATAHGQMGESELEAVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADRMGLSQLYQLRGRVGRWNRIAYAYFMYQKDKILREEAEKRLSAIKEFTELGSGFKIAMRDLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIEAKK--VPVEIDIQADAYIPEYYITDGRQKIEMYKRFRNIETLSELEDLQSDMIDRFGEYPEEVEYLFTMTELKVHALEVGIESVKQEQNKITMLFSE
>P637222961 NP_469591 lin0246 transcription-repair coupling factor [Listeria innocua Clip11262]
GLTGSSRALFASVVEGPVVFVTHNLYHAQKLYDDLLSLIDVDRLFLYPADELISSELSISSPELRGQRVEALDFLGIVIVPVAGLRKMLPPVSLWKHFNISIVEGEEIDPDVLRQKLVTMGYTMSGMVNTPGEFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRVEEFRLLPATEIILDQSKPDMFFKYIGLAYSLFDYLPKNTATEIESWHKNNYAVVILAPNLERAEKMQQTLADFVIGTFQNGFELPLVAIISETELFNKNAERIQSYSELKVGDYVVHVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDLVQKYVGAEGKSPRLNKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQETDDQLRSISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHYETMKERFQGFPIEIGLLSRFRTKKQQTETLKGMKNGTVDIVVGTHRLLSKDVEYQDLGLLVVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSMLGVRDLSVIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAMVPDARVATAHGQMGESELESVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADRMGLSQLYQLRGRVGRWNRIAYAYFMYQKDKILREEAEKRLSAIKEFTELGSGFKIAMRDLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIEAKK--VPVEIDIQADAYIPEYYITDGRQKIEMYKRFRNIESLLDLEDLQSDMIDRFGEYPEEVEYLFTMTELKVHALEVGIESVEQEQNKITMLFSE
>P639705048 YP_848377 lwe0176 transcription-repair coupling factor [Listeria welshimeri sv 6b SLCC5334]
GLTGSSRALFASVVEGPVVFVTHNLYHAQKLYDDLLSLMDVDRLFLYPADELISSELSISSPELRGQRVEALDFLGIVIVPVAGLRKMLPPVSLWKHFNISIVEGEEIDPDVLRQKLVTMGYTMSGMVNTPGEFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRVEEFRLLPATEIIIDQSKPDMFFKYIGLAYSLFDYLPKNTATELESWHKNNYAVVILAPNLERAEKMQQTLADFVIGTFQNGFELPLVAIISETELFNKNAERIQSYSELKVGDYVVHVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDLVQKYVGAEGKTPRLNKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQETEDQLRSISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHFETMKERFQGFPIEIGLLSRFRTKKQQTETLKGMKNGTVDIVVGTHRLLSKDVEYQDLGLLVVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSMLGVRDLSVIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAMVPDARVATAHGQMGESELESVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADRMGLSQLYQLRGRVGRWNRIAYAYFMYQKDKILREEAEKRLSAIKEFTELGSGFKIAMRDLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIEAKK--VPVEIDIQADAYIPEYYITDGRQKIEMYKRFRNIESLNDLEDLQSDMIDRFGEYPEEVEYLFTMTELKVHALEVGIESVKQEQNKITMLFSE
>P643782791 YP_002769584 BBR47_01030 transcription-repair coupling factor [Brevibacillus brevis NBRC 100599]
GLAGSARQVLMASLQQPVCVVTHNMYQAQKVYEDLIELVPSDQVLLYPGNELIGSELAIASPEMLAQRIHVFNRLGFLVAPFAGLRRLVVPPQVWKEAQIQLSVGNELDIESFLLRCIELGYERVDMVERKGEMSIRGGIIDLYPIDSEWPVRIELFDVEIDSIRTFDMLSQRSLESVQTYILGPAKEMIASTPRFAQLYSYISVIYTLLSYMPSDTLTELARWKKSQDQIVFVAADLERAKRLERVLHDIILGNLQTGFELPLLVVITEGEVFTANAERIKNYLELKPGDFVVHVNHGIGKYLGIETKEILGIHKDYLHIQYAAGDSLFVPIDQIDHVQKYVASEEAQPKIYSLGGSEWKRVKNKVQSSVKDIAEDLIKLYAARESAVGHTFSPDTTEQREFEAMFPYQETQDQLRAISEVKADMERKRPMDRLVCGDVGYGKTEVAIRAAFKAVMDGKQVAVLVPTTILAQQHYETFRERFAEYPIRVEVLSRFRSRKEQNATLKGLKEGTVDVVIGTHRLLSKDLTFRELGLLIVDEEQRFGVSHKEKLKQIKTNVDVMTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVMDYSPALVREAIEREMARDGQVFFLYNQVQGIEQMAEQISMLVPDARIAVAHGQMNESELEGVILDFLEGNFDVLVSTTIIETGVDIPNVNTLIIYNADKMGLSQLYQLRGRVGRSNRIAYAYFTYQRDKVLTEVAEKRLQAIKEFTELGSGFKIAMRDLSIRGAGNLLGAEQHGFINTVGFDLYSQMLKEAIDELKGETPVEINLQLDAYIPSMYITDSRQKIEMYKKFVAVSTLEDVDDLAEELLDRFGPVPKPVDNLLTISRLRVYALKHHITEISKNPDEIKLLLHP
>P637323631 NP_690984 OB0063 transcription-repair coupling factor [Oceanobacillus iheyensis HTE831]
GLSGSARSLVISAIHEPVLIVTHQLAQAQQLYDDFVELVDDERVYLYPVNELIASEIAIASPELRAQRIEALTEWGILIAPVAALKRILPPQNYWDNYQLLFKLGNDIKIDHYLSSLVDMGYEHASMVTSPGEFSKRGGIIDIYPITEKHPIRIELFDEEVDSIRYFDAESQRSLDKLDEVTIGPASELLLTDERFQEMYKYIGYLYSLLDYLPSNGLNELQRWEKGDYSVIILAADEQRAEKVHSILDDIIVGNIQSGTEFPMLAVVTEQELFKKNAERIKSYQELKIGDYVVHANHGVGKYLGIETLEVSNLHKDYMLIKYSGDDKLFVPIDQIDLVQKFVGSEAKEPKLYKLGGTEWTKVKRKVQSSVEDIADDLIKLYAEREAKQGYAFSPDSELQHEFEASFPYQETDDQLRCIQEIKEDMEKERPMDRLLCGDVGYGKTEVAIRAAFKAISDGKQVAILVPTTILAQQHYETIRERFQDYPINIGLLSRFRTKKQQTETTKGLKSGNVDVVVGTHRILSKDVEYKDLGLLIVDEEQRFGVKHKEKIKQLKTNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPIQTYVTEYNPIFMREAIEREMGRGGQVFFLYNRVESIDKIARDLGMLVPEAKIAVAHGQMNESELENVIFSFLEGEFDILVSTTIIETGVDIPNVNTLIVNHADYMGLSQLYQLRGRVGRSNRVAYAYFTYQKDKVLTEVAEKRLQAIKEFTELGSGFKIAMRDLSIRGTGNLLGSQQHGFIDSVGFDMYSQMLKDAIDARKAGFEPELSLKLDAYIPDEYLEDEKQKIEIYKQFQTLDSQEAIGDLKDELIDRFGDYPQEVEHLFTVSEMKMYAKTQRVESILETPKKMLIDESR
>P637618386 YP_173587 ABC0083 transcription-repair coupling factor [Bacillus clausii KSM-K16]
GLTGSARTVVSAALFRSQLVVTHNLYQAQKIYEDLVELLDEDTVYLYPVNELISAEIAVASPEMKAQRLDLLNALGIVVAPLAGIRRLLPPKALWQSSQLHLKTGEDIDLEEFIKNFVTMGYRRSDMVSAPGEFSVRGGIVDLYPLTKEHPLRIELFDTEVDSMRYFSLETQRSEGMIDEVTIGPAQEVLLHHSTFEGMYKYMSLYYSLLSYMPEDAFSEVNRWLSNDYTVLFIAGTEDRANRLALNLEDIYTGHLHTGFELSELVVVTEEEVFSKNAERIKSYSELAVGDLVVHTNHGVGKYLGVETLEINGVHKDYLNLRYAGNDKLYVPVEQIDQVQKYVGTEEKDPKIYALGGSDWKKVKKKVQTSVEDIADDLIKLYAEREASVGHRFSSDGPEQAEFESSFPYQETEDQLRAIKEIKEDMEKQRPMDRLLCGDVGYGKTEVAIRAAFKAIMDGKQVAILVPTTILAQQHFETISDRFSDFPITVGVLSRFRSRKEQTEVLKGLKAGSVDLVVGTHRLLSKDVQFRDLGLLIVDEEQRFGVTHKEKIKRMKANIDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEFNPAIVREAIERELSRGGQVYVLYNRVEDIERMTEQISTLVPDARVSYAHGQMNERELESIILDFLEGESDVLVTTTIIETGVDIPNVNTLIVCNADKMGLSQLYQIRGRVGRSNRVAYSYFTYQPDKVLTEVAEKRLQAIKEFTELGSGFKIAMRDLTIRGAGNLLGSQQHGFIDSVGFDLYSQMLKEAIEERK-GFKAELNVNIDAYIPERYIPDAKQKIEMYKRFKGVETLEEIADLQDELVDRFGEYPKQVAYLFEMTKIKLIADQEKVEKITEGKDAVTILLTE
>P637056695 NP_240935 BH0069 transcription-repair coupling factor (TRCF) [Bacillus halodurans C-125]
GLSGSARPAVMAALYKPQLVITYNLYQAQKIFEDLVELVGADHVLLYPVNDLISSEIAIASPEMKAQRIDVLNQLGIVVVPLAGMRRLLPPSSLWKESQIRLSVGDDIDLESLIRRLVRNGFTRVDMVTTPGECSVRGGIIDLYPLTEEDPIRIELFDTEIDSIRTFTIEDQRSKDSLSEVVIGPAAEIIMDEEPFPSMYKYISLFYSLFSYVPSNGVSEVKRWISSQFATVFIAATRERAKRLNHVLAEIMVGALTSGFELTLLVVITEEEIFAKNAERIKNYSELKVGDLVVHTNHGIGKYLGIETLEINGVHKDYLHIRYAGNDKLYVPVEQIDQVQKYVGAEDKDPKLYSLGKSDWKKVKRRVQSSVEDIADDLIKLYAEREASKGFAFAPDGPEQAEFEASFPYQETEDQLRAIQEIKEDMEKERPMDRLLCGDVGYGKTEVAIRAAFKAIMNGKQVAILVPTTILAQQHFETIQERFADYPINIGVLSRFRSRKEQSQTLKGLKAGSVDLVVGTHRLLSKDVQFKDLGLLIVDEEQRFGVTHKEKIKQLKANIDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNSPLVREAIERELSRGGQVYFLYNRVENIERMANEISMLVPDARVSFAHGQMKESELESIMLAFLEGESDVLVTTTIIETGVDIPNVNTLIIHGADKMGLSQLYQIRGRVGRSNRVAYAYFTYQRDKVLSEVAEKRLQAIKEFTELGSGFKIAMRDLAIRGAGNLLGAQQHGFIESVGFDLYSQMLKEAIEKRK-GRNVEIDVQVDAYIPDSYIQDAKQKIEMYKRFRGVETIEEINDLKDEMFDRFGEYPQEVSDLLQLTTIKIIAYQEGVESIVESKGQWIILLSP
>P643428539 YP_002314417 Aflv_0048 Transcription-repair coupling factor (helicase, mfd) [Anoxybacillus flavithermus WK1]
GLSGSARSVFISSLYEPLCIVTHNLFQAQKIYDDLIQLIDEEEVFLYPVNELIAAELAVASPELRAQRLEVLNYWGIVIAPIAALRRLLPPKDVWQRYQLHFRVGEQMDVEHCLKQFVAMGYERVSVVSTPGEFSVRGGIIDIYPLTAELPYRIELFDVEIESIRTFSVDDQRSVAEIDEVLIGPATELIVEQQSIEEMYKYFSLFYSLLDYIPEHGVGEVERWQKGNYAVVLLAGNEERAKKLKQTLEDIVPSGLVAGFELPMLAVITEEELFKKNAERIKSYTDLKVGDYVVHVNHGIGKYLGIETLEINGVHKDYIHIQYQGNDTLYVPVDQMDLVQKYVGSEGKEPKIYKLGGTEWKKVKKKVESSVQDIAEDLMKLYAEREASKGYAFSPDNEMQREFEAAFPYQETEDQLRSIREIKRDMESERPMDRLLCGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHYETVRERFQGYPIHVSLLSRFRTKKQQTETIQGLKDGTIDMVIGTHRLLSKDVSFKDLGLLIIDEEQRFGVAHKEKIKQLKTNIDVLTLTATPIPRTLHMSLIGVRDLSVIETPPENRFPVQTYVMEYSPIIVREAIEREMARGGQVFFLYNRVEDIDRKAEEISALVPDARVTYAHGRMSEHELEAVMLAFLEGQYDVLVSTTIIETGVDIPNVNTLIVYDADKMGLSQLYQLRGRVGRSNRIAYAYFTYRKDKVLNEIAEKRLQAIKEFTELGSGFKIAMRDLSIRGAGNLLGAQQHGFIDSVGFELYSQMLKEAIEEKRGTFEVEIDLEVDAYIPEHYIANEQQKIEMYKRFRGLDSLEELEQLREEMLDRFGDYPDEVAYLFQIAEMKIYAKQHLIESIKQTKQEVTILFSQ
>P637596757 YP_145901 GK0048 transcription-repair coupling factor [Geobacillus kaustophilus HTA426]
GLSGSARSVFISTLYKPLLVVSHNLFQAQKMYDDLVSLLGPEDVFLYSVNEVIAAEMAVASPELKAQRLEIMNHWGVVVCPVAGLRRLLPPPSLWKQYLFTFSVGQEFDVERCKQKFVQMGYKRVGTVSAPGEFSVRGGIIDIYPLTAELPYRIELFDTEIESIRTFTPDDQRSQGQIERIMIGPADEIILDGEEIEQQYKYMSLFYSLLDYLPEDGVSEVERWTKANYAVVFLAPNAERVKKLQSLLQDLLEGDLNTGFELPLIAVITEEELFKKNAERIKSYAELQVGDYVVHVNHGIGKYLGIETLEINGVHKDYIHIQYQGGDTLYVPVDQIDQVQKYVGSEGKEPKIYKLGGSEWKKVKRKVESSVQDIAEDLIKLYAEREASKGYAFSPDTEMQREFEAAFPYQETEDQLRSIEEIKRDMESDKPMDRLLCGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHYETVRERFQGFPIKVGLLNRFRTKKQQAETIKGLKDGTIDMVIGTHRLLSKDVEFKDLGLLIIDEEQRFGVAHKEKIKQLKANIDVLTLTATPIPRTLHMSMIGVRDLSIIETPPENRFPVQTYVMEYTPELVKEAIERELARDGQVFFLYNHIEDIDLKAEEIAQLVPEARVTYVHGRMSETELESTILAFLEGQYDVLVTTTIIETGIDIPNVNTLIVYDADRMGLSQLYQLRGRVGRSNRVAYAYFTYRKDKVLNEAAEKRLQAIKEFTELGSGFKIAMRDLSIRGAGNILGAEQHGFIDSVGFDLYSQMLKEAIEKRRGIPDVVIDVEVDAYIPSTYIADELQKIEMYKRFKAVETLEDIEELREEMVDRFGDYPDEVAYLFQIAELKVLAKQLGVESMKQHKQQIDILFTE
>P640190835 YP_001124180 GTNG_0048 Transcription-repair coupling factor [Geobacillus thermodenitrificans NG80-2]
GLSGSARSVFISTLYKPMLVVAHNLFQAQKIYDDLVSLLGPDDVFLYSVNEVIAAEMAVASPELKAQRLEIMNHWGVVVCPVAGLRRLLPPLSLWKHYLFTFSVGQELDLERYKQLFVEMGYKRVATVSAPGEFSIRGGIVDIYPLTAELPYRIELFDTEIESIRTFTPDDQRSHEQVDRVMIGPADEIILNEEEIEQQYKYMSLFYSLLDYLPEDGVSEIERWKKANYAVVFLAPDAERVKKLQSLLEDLLQGDLNTGFELPLLAVITEEELFKKNAERIKSYAELQVGDYVVHVNHGIGKYLGIETLEINGVHKDYIHIQYQGGDTLYVPVDQMDQVQKYVGSEGKEPKIYKLGGTEWKKVKKKVESSVQDIAEDLIKLYAEREASKGYAFSQDTEMQREFEAAFPYQETEDQLRSIEEIKRDMESEKPMDRLLCGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHYETVRERFQGFPINVGVLNRFRTRKQQAETIKGLKDGTIDMVIGTHRLLSKDVKFKDLGLLIIDEEQRFGVAHKEKIKQLKANIDVLTLTATPIPRTLHMSMIGVRDLSIIETPPENRFPVQTYVMEYTPELVKEAIERELARDGQVFFLYNHIEDIDLRAEEIAQLVPEARVTFAHGRMSEAELESTILAFLEGQYDVLVTTTIIETGVDIPNVNTLIVYDADRMGLSQLYQLRGRVGRSNRVAYAYFTYRKDKVLNETAEKRLQAIKEFTELGSGFKIAMRDLSIRGAGNILGAEQHGFIDSVGFDLYSQMLKEAIEKRRG-PDVVIDVEVDAYIPDTYISDGLQKIEMYKRFKAVETLEDVEMLREEMADRFGDYPDEVAYLFQIAEIKALAKQLGVESIKQHKQQIDLLFTE
>P641375161 YP_001642945 BcerKBAB4_0048 transcription-repair coupling factor [Bacillus weihenstephanensis KBAB4]
GMATSSRSLLMAALYKSQLIVTHNLYQAQKVHEDLVALLGEKDVWLYPVNELIASEVGVASPELKAQRIEVLNRLGIIVAPVAGLRRFLPIKELWKQRQIEINLGQEIDLDALLHTLHHIGYERKSMVEAPGDFSLRGGILDIYPLTEELPFRIEFFDTQVDSIRLFDVEEQRSQDKRESVRFGPATEFLFSQESIEQMFKYLSIFYSLIDYLPENGVTEIDRWNEGNFTTVVLGTDDERVKKLQHILSDIAVGDLHAGFEMPMFVVITEKELFHKNAERIKSYSELKVGDHVVHVNHGIGKFLGIETLEINGVHKDYLNIKYQGNDKLYVPIEQIDQVQKYVGSEGKEPKVYKLGGNDWKKVKTKVEKSVQDIADDLIKLYAEREASKGYAYTPDTAEQQEFESLFPYQETEDQLRSIEEIKKDMERGRPMDRLLCGDVGYGKTEVAIRAAFKAIMDEKQVAILVPTTILAQQHYETIRERFQDYPINIGLLSRFRTRKQQNETIKGLKDGTVDIVIGTHRILSKDVTYKDLGLLIIDEEQRFGVTHKEKIKQLKANVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNPALMREAIERELARGGQIYFLYNRVEDIERKADEISMLVPDARVTYAHGKMNEGELESVMLSFLEGQHDVLVSTTIIETGVDIPNVNTLIVFDADRMGLSQLYQLRGRVGRSNRVAYAYFAYKRDKVLSEVAERRLQAIKEFTELGSGFKIAMRDLSIRGAGNLLGAEQHGFIDSVGFDLYSQMLKDAIEQRR-GVNVEIDLEVDAYLPDAYISDSKQKIMMYKQFRGISAIEDIEELQEEMIDRFGDYPQEVGYLLQIANIKVLAMKEQIELIKQNKFEVTFLFSE
>P637416868 NP_829955 BC0058 Transcription-repair coupling factor [Bacillus cereus ATCC 14579]
GMATSSRSLLMAALYKSQLIVTHNLYQAQKVHEDLVALLGEKDVWLYPVNELIASEIGVASPELKAQRIEVLNRLGIIVAPVAGLRRFLPIKELWKQKQVEINLGQEIDLDALLHTLHHIGYERKSMVEAPGEFSLRGGILDIYPLTEELPFRIEFFDTEVDSIRLFDVDEQRSQGKKESVRFGPATEFLFSQESIEQMFKYLSIFYSLIDYLPEDGVTEIDRWNEGHFTTVVLGTDDERVKKLQHILSDIAVGDLHAGFEMPMLVVITEKELFHKNAERIKSYSELKVGDYVVHVNHGIGKFLGIETLEINGVHKDYLNIKYQGNDKLYVPIEQIDQVQKYVGSEGKDPKVYKLGGNDWKKVKTKVEKSVQDIADDLIKLYAEREASKGYAYTPDTAEQQEFESSFPYQETEDQLRSIDEIKKDMERGRPMDRLLCGDVGYGKTEVAIRAAFKAIMDEKQVAILVPTTILAQQHYETIRERFQDYPINIGLLSRFRTRKQQNETIKGLKDGTVDIVIGTHRILSKDVTYKDLGLLIIDEEQRFGVTHKEKIKQLKANVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNPALMREAIERELARGGQVYFLYNRVEDIERKADEISMLVPDARVTYAHGKMNESELESVMLSFLEGQHDVLVSTTIIETGVDIPNVNTLIVFDADRMGLSQLYQLRGRVGRSNRVAYAYFAYKRDKVLSEVAEKRLQAIKEFTELGSGFKIAMRDLSIRGAGNLLGAEQHGFIDSVGFDLYSQMLKDAIEQRR-GVNVEIDLEVDAYLPDAYISDSKQKIMMYKQFRGVSAIEDIEELQEEMIDRFGDYPQEVGYLLQIANIKVLAMKEQIELIKQNKFEVTFLFSE
>P643448584 YP_002336171 BCAH187_A0062 transcription-repair coupling factor [Bacillus cereus AH187]
GMATSSRSLLMAALYKSQLIVTHNLYQAQKVHEDLVALLGEKDVWLYPVNELIASELGVASPELKAQRIEVLNRLGIIVAPVAGLRRFLPMKELWKQRQIEISLGQEIDLDTFLHTLHHIGYERKSMVEAPGEFSLRGGILDIYPLTEELPFRIEFFDTEVDSIRLFDVDEQRSQDKKESVRFGPATEFLFSQESIEQMFKYLSIFYSLIDYLPEDGVTEIDRWNEGHFTTVVLGTDDERVKKLQHILSDIAVGDLHAGFEMPMLVVITEKELFHKNAERIKSYSELKVGDYVVHVNHGIGKFLGIETLEINGVHKDYLNIKYQGNDKLYVPIEQIDQVQKYVGSEGKDPKVYKLGGNDWKKVKTKVEKSVQDIADDLIKLYAEREASKGYAYTPDTAEQQEFESSFPYQETEDQLRSIEEIKKDMERGRPMDRLLCGDVGYGKTEVAIRAAFKAIMDEKQVAILVPTTILAQQHYETIRERFQDYPINIGLLSRFRTRKQQNETIKGLKDGTVDIVIGTHRILSKDVTYKDLGLLIIDEEQRFGVTHKEKIKQLKANVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNPALMREAIERELARGGQVYFLYNRVEDIERKADEISMLVPDARVTYAHGKMNESELESVMLSFLEGQHDVLVSTTIIETGVDIPNVNTLIVFDADRMGLSQLYQLRGRVGRSNRVAYAYFAYKRDKVLSEVAEKRLQAIKEFTELGSGFKIAMRDLSIRGAGNLLGAEQHGFIDSVGFDLYSQMLKDAIEQRR-GVNVEIDLEVDAYLPDAYISDSKQKIMMYKQFRGVSAIEDIEELQEEMIDRFGDYPQEVGYLLQIANIKVLAMKEQIELIKQNKFEVTILFSE
>P643849055 YP_002864705 BAA_0063 transcription-repair coupling factor [Bacillus anthracis A0248]
GMATSSRSFLMAALYKSQLIVTHNLYQAQKVHEDLVALLGEKDVWLYPVNELIASELGVASPELKAQRIEVLNRLGIIVAPVAGLRRFLPMKELWKQRQIEISLGQEIDLDTFLHTLHHIGYERKSMVEAPGEFSLRGGILDIYPLTEELPFRIEFFDTEVDSIRLFDVDEQRSQDKKESVRFGPATEFLFSQESIEQMFKYLSIFYSLIDYLPEDGVTEIDRWNEGHFTTVVLGTDDERVKKLQHILSDIAVGDLHAGFEMPMLVVITEKELFHKNAERIKSYSELKVGDYVVHVNHGIGKFLGIETLEINGVHKDYLNIKYQGNDKLYVPIEQIDQVQKYVGSEGKDPKVYKLGGNDWKKVKTKVEKSVQDIADDLIKLYAEREASKGYAYTPDTAEQQEFESSFPYQETEDQLRSIEEIKKDMERGRPMDRLLCGDVGYGKTEVAIRAAFKAIMDEKQVAILVPTTILAQQHYETIRERFQDYPINIGLLSRFRTRKQQNETIKGLKDGTVDIVIGTHRILSKDVTYKDLGLLIIDEEQRFGVTHKEKIKQLKANVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNPALMREAIERELARGGQVYFLYNRVEDIERKADEISMLVPDARVTYAHGKMNESELESVMLSFLEGQHDVLVSTTIIETGVDIPNVNTLIVFDADRMGLSQLYQLRGRVGRSNRVAYAYFAYKRDKVLSEVAEKRLQAIKEFTELGSGFKIAMRDLSIRGAGNLLGAEQHGFIDSVGFDLYSQMLKDAIEQRR-GVNVEIDLEVDAYLPDAYISDSKQKIMMYKQFRGVSAIEDIEELQEEMIDRFGDYPQEVGYLLQIANIKVLAMKEQIELIKQNKFEVTILFSE
>P637787010 YP_016655 GBAA0052 transcription-repair coupling factor [Bacillus anthracis Ames Ancestor]
GMATSSRSFLMAALYKSQLIVTHNLYQAQKVHEDLVALLGEKDVWLYPVNELIASELGVASPELKAQRIEVLNRLGIIVAPVAGLRRFLPMKELWKQRQIEISLGQEIDLDTFLHTLHHIGYERKSMVEAPGEFSLRGGILDIYPLTEELPFRIEFFDTEVDSIRLFDVDEQRSQDKKESVRFGPATEFLFSQESIEQMFKYLSIFYSLIDYLPEDGVTEIDRWNEGHFTTVVLGTDDERVKKLQHILSDIAVGDLHAGFEMPMLVVITEKELFHKNAERIKSYSELKVGDYVVHVNHGIGKFLGIETLEINGVHKDYLNIKYQGNDKLYVPIEQIDQVQKYVGSEGKDPKVYKLGGNDWKKVKTKVEKSVQDIADDLIKLYAEREASKGYAYTPDTAEQQEFESSFPYQETEDQLRSIEEIKKDMERGRPMDRLLCGDVGYGKTEVAIRAAFKAIMDEKQVAILVPTTILAQQHYETIRERFQDYPINIGLLSRFRTRKQQNETIKGLKDGTVDIVIGTHRILSKDVTYKDLGLLIIDEEQRFGVTHKEKIKQLKANVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNPALMREAIERELARGGQVYFLYNRVEDIERKADEISMLVPDARVTYAHGKMNESELESVMLSFLEGQHDVLVSTTIIETGVDIPNVNTLIVFDADRMGLSQLYQLRGRVGRSNRVAYAYFAYKRDKVLSEVAEKRLQAIKEFTELGSGFKIAMRDLSIRGAGNLLGAEQHGFIDSVGFDLYSQMLKDAIEQRRGTVNVEIDLEVDAYLPDAYISDSKQKIMMYKQFRGVSAIEDIEELQEEMIDRFGDYPQEVGYLLQIANIKVLAMKEQIELIKQNKFEVTILFSE
>P637511403 YP_034406 BT9727_0048 transcription-repair coupling factor [Bacillus thuringiensis sv konkukian 97-27]
GMATSSRSLLMAALYKSQLIVTHNLYQAQKVHEDLVALLGEKDVWLYPVNELIASELGVASPELKAQRIEVLNRLGIIVAPVAGLRRFLPMKELWKQRQIEINLGQEIDLDTFLHTLHHIGYERKSMVEAPGEFSLRGGILDIYPLTEELPFRIEFFDTEVDSIRLFDVDEQRSQDKKESVRFGPATEFLFSQESIEQMFKYLSIFYSLIDYLPEDGVTEIDRWNEGHFTTVVLGTDDERVKKLQHILSDIAVGDLHAGFEMPMLVVITEKELFHKNAERIKSYSELKVGDYVVHVNHGIGKFLGIETLEINGVHKDYLNIKYQGNDKLYVPIEQIDQVQKYVGSEGKDPKVYKLGGNDWKKVKTKVEKSVQDIADDLIKLYAEREASKGYAYTPDTAEQQEFESSFPYQETEDQLRSIEEIKKDMERGRPMDRLLCGDVGYGKTEVAIRAAFKAIMDEKQVAILVPTTILAQQHYETIRERFQDYPINIGLLSRFRTRKQQNETIKGLKDGTVDIVIGTHRILSKDVTYKDLGLLIIDEEQRFGVTHKEKIKQLKANVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNPALMREAIERELARGGQVYFLYNRVEDIERKADEISMLVPDARVTYAHGKMNESELESVMLSFLEGQHDVLVSTTIIETGVDIPNVNTLIVFDADRMGLSQLYQLRGRVGRSNRVAYAYFAYKRDKVLSEVAEKRLQAIKEFTELGSGFKIAMRDLSIRGAGNLLGAEQHGFIDSVGFDLYSQMLKDAIEQRR-GVNVEIDLEVDAYLPDAYISDSKQKIMMYKQFRGVSAIEDIEELQEEMIDRFGDYPQEVGYLLQIANIKVLAMKEQIELIKQNKFEVTILFSE
>P639747224 YP_892975 BALH_0048 transcription-repair coupling factor [Bacillus thuringiensis Al Hakam]
GMATSSRSLLMAALYKSQLIVTHNLYQAQKVHEDLVALLGEKDVWLYPVNELIASELGVASPELKAQRIEVLNRLGIIVAPVAGLRRFLPMKELWKQRQIEISLGQEIDLDTFLHTLHHIGYERKSMVEAPGEFSLRGGILDIYPLTEELPFRIEFFDTEVDSIRLFDVDEQRSQDKKESVRFGPATEFLFSQESIEQMFKYLSIFYSLIDYLPEDGVTEIDRWNEGHFTTVVLGTDDERVKKLQHILSDIAVGDLHAGFEMPMLVVITEKELFHKNAERIKSYSELKVGDYVVHVNHGIGKFLGIETLEINGVHKDYLNIKYQGNDKLYVPIEQIDQVQKYVGSEGKDPKVYKLGGNDWKKVKTKVEKSVQDIADDLIKLYAEREASKGYAYTPDTAEQQEFESSFPYQETEDQLRSIEEIKKDMERGRPMDRLLCGDVGYGKTEVAIRAAFKAIMDEKQVAILVPTTILAQQHYETIRERFQDYPINIGLLSRFRTRKQQNETIKGLKDGTVDIVIGTHRILSKDVTYKDLGLLIIDEEQRFGVTHKEKIKQLKANVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNPALMREAIERELARGGQVYFLYNRVEDIERKADEISMLVPDARVTYAHGKMNESELESVMLSFLEGQHDVLVSTTIIETGVDIPNVNTLIVFDADRMGLSQLYQLRGRVGRSNRVAYAYFAYKRDKVLSEVAEKRLQAIKEFTELGSGFKIAMRDLSIRGAGNLLGAEQHGFIDSVGFDLYSQMLKDAIEQRRGTVNVEIDLEVDAYLPDAYISDSKQKIMMYKQFRGVSAIEDIEELQEEMIDRFGDYPQEVGYLLQIANIKVLAMKEQIELIKQNKFEVTILFSE
>P640944655 YP_001485299 BPUM_0039 transcription-repair coupling factor [Bacillus pumilus SAFR-032]
GLSGSVRSLFTAAISDPMFIVTHNLYQAQKVTDDLASVMSDRSVLLYPVNELIASEIAVASPELRAQRLDVLNRLPIIVTPAAAVRRMLPPVELWKESQIHLKLGEEIDLEAFSKQLVQIGYDRTSMVAAPGDFSVRGGIIDIYSLTEDHPIRIELFDTEVDSIRTFHSDTQRSLETLQEIKIGPAKELIVRGPVTQEMTKYLSYFYSLLDYTSQDTISEIERYKKQQYTVVFLGADEERTDKLSSVLHDILQGELQTGFELPLIAVITEGELFKKNAERIKSYSELQVGDYVVHINHGIGKYLGIETLEIGGIHKDYLNIHYQGSDKLYVPVEQIDQVQKYVGSEGKEPKLYKLGGSDWKRVKKKVESSVQDIADDLIKLYAEREASKGYAFSPDHEMQRQFESAFPYQETDDQIRSIHEIKQDMERERPMDRLLCGDVGYGKTEVAIRAAFKAIADGKQVALLVPTTILAQQHFDTIMDRFQDYPVKIAQLSRFRTRKETTETLKGLKNGTIDMVIGTHRLLSKDIVYKDLGLLIIDEEQRFGVTHKEKIKQMKANIDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNGALVREAIERELARGGQVYFLYNRVEDIERKADEISMLVPDAKVSYAHGKMSENELESVMINFLEGESDVLVSTTIIETGVDIPNVNTLIVHDADKMGLSQLYQLRGRVGRSNRVAYAYFTYRKDKVLSEVAEKRLQAIKEFTELGSGFKIAMRDLTIRGAGNLLGAQQHGFIDSVGFDLYSQMLKEAIEERRG-FEPEIDLQIDAYIPDTYISDGKQKIEMYKQFRAIGSIEERKELQDEMIDRFGEYPQEVADLFTIATMKVYAVQERVELIKEKGI-VRLTLEE
>P639309269 YP_089741 BLi00068 Mfd [Bacillus licheniformis ATCC 14580 (Goettingen)]
GLSGSARSLFTAALTKPVFLITHNLYQAQKITDDLTGLIKDQPVLLYPVNELISSEIAVASPELRSQRLDVLNRLPIVVAPAAAVRRMLPPVEVWQNSQIHIETGRDIDTEQLLQKLVQMGYERTDMVAAPGEFSIRGGIIDVYSLTEENPVRIELFDTEVDSIRIFNTDDQRSLETRDEVTIGPAKELIVRDEIGQEMVKYLSYFYSLLDYFPKNTLNEIERFKKSKYTTVFLGDSKERVEKLASVLSDIMEGGLQSGFELPMLAVITEEELFKKNAERIKSYSELQIGDYVVHVNHGIGKYLGIETLEINGIHKDYLNIHYQGSDKLYVPVDQIDQVQKYVGSEGKEPKLYKLGGSEWKRVKKKVESSVQDIADDLIKLYAEREASKGYAFSPDHEMQREFEAAFPYQETEDQLRSIHEIKRDMEKERPMDRLLCGDVGYGKTEVAIRAAFKAIADGKQVAILVPTTILAQQHYETILERFQDYPINIGLLSRFRTRKEANETIKGLKNGTVDIVIGTHRLLSKDVVYKDLGLLIIDEEQRFGVTHKEKIKRIKANVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNGALVREAIERELARGGQVYFLYNRVEDIERKAEEISMLVPDAKVTYAHGKMTENELESVMLNFLEGESDVLVSTTIIETGVDIPNVNTLIVFDADKMGLSQLYQLRGRVGRSNRVAYAYFTYRKDKVLTEVAEKRLQAIKEFTELGSGFKIAMRDLTIRGAGNLLGAQQHGFIDSVGFDLYSQMLKEAIEARK-GFEPEIDLELDAYIPQTYVTDGKQKIDMYKRFRAISTIEEKSELQDEMIDRFGEYPKEVEYLFAIAEAKVYAIKERVELIKQDKDAVRLTIDE
>P640884114 YP_001419735 RBAM_000640 Mfd [Bacillus amyloliquefaciens FZB42]
GLSGSARSVFTSALAQPIFFITHNLYQAQKVTEDLTALLGDQSVFLYPVNELISSEIAVASPELRAQRLDVINRLPVVVAPVAAVRRMLPPKELWKSSQLVISLGDEIEPDQLSARLVEVGYERSDMVSAPGEFSIRGGIIDIYPLTSEHPVRIELFDTEVDSIRSFNSDDQRSIETLKHVAIGPAKELIIRAETDQELVKYLSYFYSLLDYTPADTLGEMERFKKSNFTVVFLGANKDRTDRLASVLADVMEGELQSGFELPLLAVITEEELFKNNAERIKSYSELQVGDYVVHVNHGIGKYLGIETLEIKGIHKDYLNIHYQGSDKLYVPVEQIDQVQKYVGSEGKEPKLYKLGGSEWKRVKKKVENSVQDIADDLIKLYAEREASKGYAFSPDHEMQRQFESAFPYQETEDQLRSIQEIKKDMERERPMDRLLCGDVGYGKTEVAIRAAFKAIADGKQVALLVPTTILAQQHYETIMERFQDYPINIGLLSRFRTRKESNETIKGLKNGTVDIVIGTHRLLSKDVVYKDLGLLIIDEEQRFGVTHKEKIKQIKANVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNGALVREAIERELARGGQVYFLYNRVDDIERKADEISMLVPDAKVAYAHGKMTENELESVMLNFLEGESDVLVSTTIIETGVDIPNVNTLIVFDGDKMGLSQLYQLRGRVGRSNRVAYAYFTYRRDKVLTEVAEKRLQAIKEFTELGSGFKIAMRDLTIRGAGNLLGAQQHGFIDSVGFDLYSQMLKEAIEERK-GFETEIDIELDAYIPENYIQDGKQKIDMYKRFRSIATIEEKNELQDEIIDRFGSYPKEVEWLFTVAEMKVYGKYERVELIKQDKDAIRFTISE
>P637030141 NP_387936 BSU00550 transcription-repair coupling factor [Bacillus subtilis 168]
GLSGSARSVFTSALANPIFLITHNLYQAQKVTDDLTSLLEDRSVLLYPVNELISSEIAVASPELRAQRLDVINRLPIVVAPVAAIRRMLPPVEVWKSSQMLIQVGHDIEPDQLASRLVEVGYERSDMVSAPGEFSIRGGIIDIYPLTSENPVRIELFDTEVDSIRSFNSDDQRSIETLTSINIGPAKELIIRPETDQELVKYLSYFYSLLDYTPDNTLGEMERFKKSNFTVVFLGANKERTQKLSSVLADIMEGELQSGFELPLLAVITEEELFKNNAERIKSYSELQIGDYVVHINHGIGKYLGIETLEINGIHKDYLNIHYQGSDKLYVPVEQIDQVQKYVGSEGKEPKLYKLGGSEWKRVKKKVETSVQDIADDLIKLYAEREASKGYAFSPDHEMQREFESAFPYQETEDQLRSIHEIKKDMERERPMDRLLCGDVGYGKTEVAIRAAFKAIGDGKQVALLVPTTILAQQHYETIKERFQDYPINIGLLSRFRTRKEANETIKGLKNGTVDIVIGTHRLLSKDVVYKDLGLLIIDEEQRFGVTHKEKIKQIKANVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRFPVQTYVVEYNGALVREAIERELARGGQVYFLYNRVEDIERKADEISMLVPDAKVAYAHGKMTENELETVMLSFLEGESDVLVSTTIIETGVDIPNVNTLIVFDADKMGLSQLYQLRGRVGRSNRVAYAYFTYRRDKVLTEVAEKRLQAIKEFTELGSGFKIAMRDLTIRGAGNLLGAQQHGFIDSVGFDLYSQMLKEAIEERK-GFETEIDVELDAYIPETYIQDGKQKIDMYKRFRSVATIEEKNELQDEMIDRFGNYPKEVEYLFTVAEMKVYARQERVELIKQDKDAVRLTISE
>P639668445 YP_809840 OEOE_0183 Transcription-repair coupling factor (superfamily II helicase) [Oenococcus oeni PSU-1]
GVNDTPKAALAAGVFEKILLLTDTQFRADQLTSDLEALLEDENVFEMQSEESLATETAVASRDADLSRVLALRALSIVVVPLSGLSRRYPDPEFFQQAVLDFKIANSYPQEQLAKKLIEMGYNKQTLVANPGEFSVRGEIVDIYPINFDEPIRLDFFDDELESMRTFDADSQKSLNKIKQASVSPVSDFLLPRAYGHELLPFSEFFLSIFEYLQSEDLLDLESYRKRDFTVLLQASNRERLLSLQRTLHDLQIGSLSHGFELPEIVVMTETELFAKNAEKITSYTELKTGDYVVHVNHGIGRYEGLTTLEANGGKQDYITIAYAQKAKIFVPVTHLNLVQKYIGAADGRPKVNSLNSTDWAKTKRRVTAKVEDIADELIALYSKREGEVGYAFSVDDQRQQEFDDGFAYPETVDQLRSIKEIKSDMENKKPMDRLLVGDVGFGKTEVAFRAAFKAIEDHKQVAFLTPTTILSQQHYQTAIERFSDFPIKIAMLSRFNTAGQNKEVIKKLKAHQLDMVIGTHRLLSKDVAFDDLGLLIIDEEQRFGVKHKEKIKQLRANVDVLTLTATPIPRTLNMALVGARDLSVLETPPANRFPIQTYVLEENWPVIADAIEKELSRGGQTFFLHNRVQDIERTVGEIQRIVPDANVGYIHGRMNETQLEDVLMDFLNGIYDVLVTTTIIETGVDIPNANTLIVENSERFGLSQLYQLRGRIGRSNRLAYAYFTYPGDRQPTEDAQKRLEAIRDFTELGSGFKLAMRDLSIRGAGDLLGKQQHGFIDSVGYELYQQMLQEAVSQKQ-GTNAEIVLNIEALLPDSYVNDSSQKVELYQRIRKSRTDEQFNEVRQDLIDRFGPIPEVVDNLFALAHLKNATDAANVINLHGDDSQIRIIFSR
>P641605244 YP_001728695 LCK_01427 Transcription-repair coupling factor [Leuconostoc citreum KM20]
GVNGSARAASIAALYQQMLVITDTQAHADQMLADLSGLT-PEAI-SFPAEESLATEMAISSPELRLQRVLTLLRLCIVVTSLAGAERFLPEPSTLDQASLSLTVQARYDIHQIKNTLMMMGYIPTKLVQGPGEFAQRGAIVDIYPLTEDNPIRLDFFDDELDQIKIFDVETQKSIAVLEATTIQPATDLIVSETRDNQLLPYALHFFNLLDYFDGQALNDLVYAQESGTTVVMLISEPQRRQHFGQSLQDLADGNLSAGFEWPKLTVLTEHELFTQNAERLKSYNELNVGDYVVHINHGIGRYEGLQTITVDGGKQDYLSIAYQKNAKIFIPVTQLNLIQKYIGASAKAPKLNKLGGAEWAKTKRQVAAKIEDIADDLLDLYAQREALSGYAFPPDDTAQLQFDTTFGYPETPDQIRSIEEIKADMQKERPMDRLLVGDVGFGKTEVALRAVFKAAHAGKQVAFLAPTTILVQQHYETMLARFSDFSIRIGVLSRFQTPAQNKKVIKELEAHELDVVVGTHRLLSQDVNFADLGLLIIDEEQRFGVKHKERLKQLRNNVDVLTLTATPIPRTLNMAMVGARDLSVIETPPANRYPIQTYVLEADWTIVRNAIEKELARDGQVFYLHNRVADLDRVASQIEDLVPSARVASIHGQMSETQLESVLYDFLNGNYDVLVTTTIIETGVDIPNANTLIVENADHMGLSQLYQLRGRVGRSTRLAYAYFTYPFTRTPSEEAEKRLEAIRDFTELGSGFRIAMRDLSIRGAGDLLGKQQHGFIDSVGYDMYTQMLKDAVAKKQG-TDTELILGVLAYLPDDYVPDNAQKIELYTRIRQAKSNEQFEDIEADMLDRFGDMPDEVARLLLVGQIKSLADQTQLVYIRQKNQ-LTLQFNH
>P639674110 YP_817894 LEUM_0399 Transcription-repair coupling factor (superfamily II helicase) [Leuconostoc mesenteroides mesenteroides ATCC 8293]
GVNGTARAASIAALYRPMLIISDTQVHADQFFDDLSSLL-EDLVYNFPAEESIATEMAISSSELRLQRVQTLLALIIVVTSLAGAERLVPKKQSLEQAHLHVKVGDAYNLNVIKNTLMMMGYTPTKLVQTPGEFAHRGSIVDVYPITFDDPIRLDFFDDELDQLKSFDVATQKSTTSFDEINIEPATDFIVSEHRGSVLVPYAPFFFTLLDYFPTDSLNDLIYAQESGITMVLLIPDAKRRANFSRSLSEIMPGELSAGFEWPKLTVLTTHELFTQNSERLKSYNELNVGDYVVHINHGIGRYEGLQTIEADGGKQDYLTIAYQQNAKIFIPVTQLNLIQKYVGASAKKPKLNKLGGSEWAKTKRQVAAKIEDIADDLLELYAKREAQQGYVFPPDDHAQIKFDDSFGYPETPDQIRSIEEIKVDMQKLRPMDRLLVGDVGFGKTEVALRAVFKAAHSGKQVAFLAPTTILVQQHYETMLARFSDFPIKIGVLSRFQTPTQNKMIIEQLQNHEIDVVVGTHRLLSKDVDFSDLGLLIIDEEQRFGVKHKERLKQLRTSVDVLTLTATPIPRTLNMAMVGARDLSVIETPPANRYPIQTYVLAMDWKIVRDAIEKEITRNGQVFYLHNRVADLDRIVSQIEELIPSARVAAIHGQMSETQLESILYDFLNGQYDVLVTTTIIETGVDIPNANTLIVENADHMGLAQLYQLRGRVGRSTRLAYAYFTYPFTRTPSEEAEKRLEAIRDFTELGSGFRIAMRDLSIRGAGDLLGKQQHGFIDSVGYDMYTQMLKDTVAQKQG-TDAELILGVLAYLPDEYVSDNAQKIELYSRIRQARTDAEFEDIESDMLDRFGEMPDEVARLLLVGQIKQLADQSQITNIRQRKQ-LIMTFNE
>P639665820 YP_808070 LACR_0011 Transcription-repair coupling factor [Lactococcus lactis cremoris SK11]
GLSGTAKSLVMANAYEKYIIVTDSQFHANELYDELSTLLGEEKVFQFFSDDNIYAEFALASKDRVAYRLEALNFLGFLVVPFLALRSYLPSPENFLENYLLLTSGDEYDLSNLVNLLSNAGYEKTQRVMTPGEFSMRGDIVDIYPLDAENPVRLEFFGDEVDTIRSFDVESQRSLTSLERLEIYPASDFILTDNYHKDLRKFAEYFYSLLNYFPKNVQTEVERFIKQEFTVVLAVSS----EKLRKSLHELIDLQLSNGFNFLDLVVMTEHEIFGKNAERLKDYNELAVGDFVVHKNHGIGKYLGLQTLEVG-MHRDYLTIQYQNGDTISVPVDHLDLLSKYTAGEGKSPKINKLNDGRWRKTMSSVSKQVEDISDDLIKLYAERQAKKGFAFSPDDASQEEFDSGFSYVETEDQIRSINEIKHDMELERPMDRLLVGDVGFGKTEVAMRAAFKAINDGKQVAVLVPTTVLAEQHFNNFTERFINFGVNVEVLSRFQTKTQQTEILAKLKKGRVDLIIGTHRLLSKDVEFFDLGLMIIDEEQRFGVKHKERLKELKTQVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVMETNYGVVRDAILREISRGGQVYYVYNRVDTIEQKVSQLEELIPEARIGFIHGQMTEVQLENTLLAFIAGDYDVLVATTIIETGVDIPNSNTLFIENADMMGLSQLYQLRGRVGRSNRVAYAYFMYRPEKILSEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNLLGSEQSGFIDSVGFDLYSQLLEEAIHTKLG-SNVEISLELDAFIPAYYISDERQKIEIYKRIRQIDSREIYEELQEELVDRFGEYPDEVAYLLEIGLLKHFADNALVEKIESRFE-ITVTLEK
>P637067193 NP_266169 L0263 transcription-repair coupling factor [Lactococcus lactis lactis Il1403]
GLSGTAKSLVMANAYEKYIIVTDSQFHANELYDELSTLLGEEKVFQFFSDDNIYAEFALASKDRVAYRLEALNFLGFLVVPFLALRSYLPSPENFLENYLLLTSGDEYDLSNLVNLLSKAGYEKTQRVMTPGEFSMRGDIVDIYPLDAENPVRLEFFGDEVDTIRSFDVESQRSLTSLERLEIYPASDFILTDKYHKDLRKFAEYFYSLLNYFPKN--TEVERFIKQEFTVVLAVSSEKLRKSLHELLQEL---QLSNGFNFLDLVVMTEHEIFGKNAERLKDYNELAVGDFVVHKNHGIGKYLGLQTLEVGGMHRDYLTIQYQNGDTISVPVDHLDLLSKYTAGEGKSPKINKLNDGRWRKTMSSVSKQVEDISDDLIKLYAERQAKKGFAFSPDDTSQEEFDSGFSYVETEDQMRSINEIKHDMELERPMDRLLVGDVGFGKTEVAMRAAFKAINDGKQVAVLVPTTVLAEQHFNNFTERFINFGVNVEVLSRFQTKTQQTEILAKLKKGRVDLIIGTHRLLSKDVEFFDLGLMIIDEEQRFGVKHKERLKELKTQVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVMETNYGVVRDAVLREISRGGQVYYVYNRVDTIEQKVSQLEELIPEARIGFIHGQMTEVQLENTLLAFIAGDYDVLVATTIIETGVDIPNANTLFIENADMMGLSQLYQLRGRVGRSNRVAYAYFMYRPEKILSEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNLLGSEQSGFIDSVGFDLYSQLLEEAIHAKLG-SNVEISLELDAFIPAYYISDERQKIEIYKRIRQIDSREIYEELQEELVDRFGEYPDEVAYLLEIGLLKPFADNVLVEKIEKSRFEVTLEKVA
>P643612818 YP_002510106 SPN23F_00060 putative putative transcription-repair coupling factor [Streptococcus pneumoniae ATCC 700669]
GLSTSTKALAIASSLERIVLLTSTYGEAEGLVSDLISILGEELVYPFLVDDAPMVEFLMSSQEKIISRVEALRFLGILVCNIVASRLILPSPNAFKDSIVKISVGEEYDQHAFIHQLKENGYRKVTQVQTQGEFSLRGDILDIFEISQLEPCRIEFFGDEIDGIRSFEVETQLSKENKTELTIFPASDMLLREKSHADSRKFLSLCYTVFDYIEKDTPEEIERYKKMDYTIILQSSNSMGSKTLEDMLEELIEGNLRHGFHFVDILLITEHEIFQKNAERLKDYNELEKGDYVVHHIHGIGQYLGIETIEIG-IHRDYVSVQYQNGDQISIPVEQIHLLSKYISSDGKAPKLNKLNDGHFKKAKQKVKNQVEDIADDLIKLYSERSQLKGFAFSADDDDQDAFDDAFPYVETDDQLRSIEEIKRDMQASQPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVVILVPTTVLAQQHYTNFKERFQNFAVNIDVLSRFRSKKEQTATLEKLKNGQVDILIGTHRVLSKDVVFADLGLMIIDEEQRFGVKHKETLKELKKQVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLEKNDSVIRDAVLREMERGGQVYYLYNKVDTIVQKVSELQELIPEASIGYVHGRMSEVQLENTLLDFIEGQYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPEKSISEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNLLGKSQSGFIDSVGFELYSQLLEEAIAKRNG-GNAELILQIDAYLPDTYISDQRHKIEIYKKIRQIDNRVNYEELQEELIDRFGEYPDVVAYLLEIGLVKSYLDKVFVQRVEKDNK-ITIQFEK
>P637191120 NP_357600 spr0006 Transcription-repair coupling factor [Streptococcus pneumoniae R6]
GLSTSTKALAIASSLERIVLLTSTYGEAEGLVSDLISILGEELVYPFLVDDAPMVEFLMSSQEKIISRVEALRFLGILVCNIAASRLILPSPNAFKDSIVKISVGEEYDQHAFIHQLKENGYRKVTQVQTQGEFSLRGDILDIFEISQLEPCRIEFFGDEIDGIRSFEVETQLSKENKTELTIFPASDMLLREKSHADSRKFLSLCYTVFDYIEKDTPEEIERYKKMDYTIILQSSNSMGSKTLEDMLEELIEGNLRHGFHFVDILLITEHEIFQKNAERLKDYNELEKGDYVVHHIHGIGQYLGIETIEIE-IHRDYVSVQYQNGDQISIPVEQIHLLSKYISSDGKAPKLNKLNDGHFKKAKQKVKNQVEDIADDLIKLYSERSQLKGFAFSADDDDQDAFDDAFPYVETDDQLRSIEEIKRDMQASQPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVVILVPTTVLAQQHYTNFKERFQNFAVNVDVLSRFRSKKEQTATLEKLKNGQVDILIGTHRVLSKDVVFADLGLMIIDEEQRFGVKHKETLKELKKQVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLEKNDSVIRDAVLREMERGGQGYYLYNKVDTIVQKVSELQELIPEASIGYVHGRMSEVQLENTLLDFIEGQYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPEKSISEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNLLGKSQSGFIDSVGFELYSQLLEEAIAKR-NGGNAELILQIDAYLPDTYISDQRHKIEIYKKIRQIDNRVNYEELQEELIDRFGEYPDVVAYLLEIGLVKSYLDKVFVQRVERKDNKITIQFEK
>P637592372 YP_140440 str0006 transcription repair coupling factor [Streptococcus thermophilus CNRZ1066]
GFSGSSKAVAMASALSKIFIVTSTQNEAEQLVGDLSAILGEDKVYSFFADDVSAAEFIFASPEKTHSRLESLNFLGVLVTSLVGTKLHLPNPRVYKDSRIDLVLGKEYDLDALSRHLTHIGYQRVEQVLSPGEFSRRGDILDIYELTAELPYRLEFFGDEIDGIRQFDSDSQKSLNNLDHVVISPADDIILTRERHKDLRKFLSLFYTLFDYLPKGTPDEIRRYTKNKATVILQVGSDKQLNSLKETLEELVLGNLSNGFYFADVVLVTEREIFHKNAERLKDYNELEKGDYVVHQTHGIGQFKGIETIEIG-VHRDYLTIQYQDAATISLPIEQIESLSKYVSVDGKEPKINKLNDGRFQKTKQKVSKQVEDIADNLLKLYAERSQLKGFAFSPDDDNQRDFEDEFSYAETVDQLRSIKEIKADMESDKPMDRLLVGDVGFGKTEVAMRAAFKAVNDGKQVAILVPTTVLAHQHYMNFKERFENHAVEVDELSRFRSKKEQNETIKNLAKGRIDIIIGTHRLLSKDVKFSDLGLLVIDEEQRFGVKHKEKLKELKAKVDVLTLTATPIPRTLHMSMLGIRDLSIIETAPTNRYPVQTYVMETNPGLIREAILREMDRGGQIFYIYNRVETIDQKVSELHELVPEARIGFVHGQMSEVMLENTLLDFLNGDYDILVATTIIETGIDIPNVNTLLIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYHPDKVLTEVSEKRLDAIKGFTELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEEAINKRQ-GGNAEFNLQIDAYLPSDYISDERQKIEIYKRIREIENQKDYQDLQDELIDRFGEYPDQVAYLIEIGLVKAYLDAAFAELVERKNDTIIVRFEK
>P639675774 YP_819598 STER_0007 Transcription-repair coupling factor (superfamily II helicase) [Streptococcus thermophilus LMD-9]
GFSGSSKAVAMASALSKIFIVTSTQNEAEQLVGDLSAILGEDKVYSFFADDVSAAEFIFASPEKTHSRLESLNFLGVLVTSLVGTKLHLPNPRVYKDSRIDLVLGKEHDLDALSRHLTHIGYQRVEQVLSPGEFSRRGDILDIYELTAELPYRLEFFGDEIDGIRQFDSDSQKSLNNLEHVVISPADDIILTRERHKDLRKFLSLFYTLFDYLPKGTPDEIRRYTKNKATVILQVGSDKQLNSLKETLEELVLGNLSNGFYFADVVLVTEREIFHKNAERLKDYNELEKGDYVVHQTHGIGQFKGIETIEIG-VHRDYLTIQYQDAATISLPIEQIESLSKYVSVDGKEPKINKLNDGRFQKTKQKVSKQVEDIADNLLKLYAERSQLKGFAFSPDDDNQRDFEDEFSYVETVDQLRSIKEIKADMESDKPMDRLLVGDVGFGKTEVAMRAAFKAVNDGKQVAILVPTTVLAHQHYMNFKERFENHAVEVDELSRFRSKKEQNETIKNLAKGRIDIIIGTHRLLSKDVKFSDLGLLVIDEEQRFGVKHKEKLKELKAKVDVLTLTATPIPRTLHMSMLGIRDLSIIETAPTNRYPVQTYVMETNPGLIREAILREMDRGGQIFYIYNRVETIDQKVSELHELVPEARIGFVHGQMSEVMLENTLLDFLNGDYDILVATTIIETGIDIPNVNTLLIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYHPDKVLTEVSEKRLDAIKGFTELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEEAINKRQ-GGNAEFNLQIDAYLPSDYISDERQKIEIYKRIREIENQKDYQDLQDELIDRFGEYPDQVAYLIEIGLVKAYLDAAFAELVERKNDTIIVRFEK
>P637315131 NP_687044 SAG0008 transcription-repair coupling factor [Streptococcus agalactiae 2603V/R]
GFSGASKAIAIASAYEKIMVVTATQTDSDKLSSDISSLIGEDNVYQFFADDVPAAEFIFSSLDKSISRLSALRFLGVLITSISGLRLLLPNPEVFSKSQYKFEIGQECYLDKLCKNLVNLGYQKVSQVFSPGEFSQRGDILDIFEMTQEYPYRLEFFGDEIDGIRQFDIDTQKSLKQLESVQISPADDIILQDAKHSDIRRFLSIFYGILDYIPEGTPDEINRYKKSGATVLLQVDSQKGLNLLQENLKELIVGHLSNGFYFADIVLITEREIYHRNAERLKDYNELSVGDYVVHNVHGVGKFLGIETIEIG-IHRDYLTIQYQNADRISIPVEQIELLTKYVSADGKEPKINTLNDGRFKKAKQRVAKQVEDIADDLLKLYAERSQLQGFAFSPDDNMQNDFDNDFAYVETEDQLRSIKEIKQDMEGNRPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVVVLVPTTVLAQQHFENFKERFSNYPVTVDVLSRFRSKKEQTDTLKRLSKGQVDIIIGTHRLLSQDVVFSDLGLIVIDEEQRFGVKHKEKLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLETNPGLVREAIIREIDRGGQVFYVYNKVDTIDQKVSELQELVPEASIGFVHGQMSEIQLENTLIDFINGDYDVLVATTIIETGVDISNVNTLFVENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPDKVLTEISEKRLDAIKGFTELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEQAIATKQG-GNAELALQIDAYLPAEYISDERQKIEIYKRIRELETRADYEALQDELIDRFGEYPDQVAYLLEIGLLKAYLDLAFTELVEKGNE-ISILFEK
>P637724367 YP_328735 SAK_0008 transcription-repair coupling factor [Streptococcus agalactiae A909]
GFSGASKAIAIASAYEKIMVVTATQNDSDKLSSDISSLIGEDNVYQFFADDVPAAEFIFSSLDKSISRLSALRFLGVLITSISGLRLLLPNPEVFSKSQYKFEIGQECYLDKLSKNLVNLGYQKVSQVFSPGEFSQRGDILDIFEMTQEYPYRLEFFGDEIDGIRQFDIDTQKSLKQLESVQISPADDIILQDAKHSDIRRFLSIFYGILDYIPEGTPDEINRYKKAGATVLLQVDSQKGLNLLQENLKELIVGHLSNGFYFADIVLITEREIYHRNAERLKDYNELSVGDYVVHNVHGVGKFLGIETIEIG-IHRDYLTIQYQNADRISIPVEQIELLTKYVSADGKEPKINTLNDGRFKKAKQRVAKQVEDIADDLLKLYAERSQLQGFAFSPDDNMQNDFDNDFAYVETEDQLRSIKEIKQDMEGNRPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVAVLVPTTVLAQQHFENFKERFSNYPVTVDVLSRFRSKKEQTDTLKRLSKGQVDIIIGTHRLLSQDVVFSDLGLIVIDEEQRFGVKHKEKLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLETNPGLVREAIIREIDRGGQVFYVYNKVDTIEQKVSELQELVPEASIGFVHGQMSEIQLENTLIDFINGDYDVLVATTIIETGVDISNVNTLFVENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPDKVLTEISEKRLDAIKGFTELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEQAIATKQ-GGNAELALQIDAYLPAEYISDERQKIEIYKRIRELETRADYEALQDELIDRFGEYPDQVAYLLEIGLLKAYLDLAFTELVERKGNEISILFE-
>P643659017 YP_002561383 SUB0007 transcription-repair coupling factor [Streptococcus uberis 0140J]
GLSGSSKALAIAANFEKLVVVTSSQNESEKLASDLSAILGEEYIYQFFSDDVAAAEFIFSSLDKTISRVEAIKFLGILITSIVGLRVLLPSPKTFLTSYLSLSIGNEYNLDTIVKQLTTMGYHKVSQVLHPGEYSKRGDILDVYEITKENPYRIEFFGDEVDGIREFNLDTQLSLSTVNEIEISPASDLILEKNCHKDIRKFISLFYTLMDYITKGVPDEISRYQKSKSTVIIQVESQHAYDRLMKNFSEIVIGSLSSGFYLADIAYITEREIYHKNAERLKDYNELVKGDYVVHNVHGIGKFLGIETIQIG-IHRDYVTIQYQNSDTISLPVEQIESLSKYVSADGKEPKINKLNDGRFQKTKQKVAKQVEDIADDLLKLYAERSQQKGFSFSADDDLQKSFDDDFPYVETEDQIRSIIEIKQDMESNHPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVAILVPTTVLAQQHFENFKERFENYPIEIDVLSRFRSKKEQGDTLEKLKKGQVDIIIGTHRLLSKDVQFSDLGLIVIDEEQRFGVKHKEKLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLETNPGLVREAIIREMDRGGQCFYVYNKVDSIDKKVSELQELVPEASIGFVHGQMSEIQLENTLIDFINGDYDVLVATTIIETGVDISNVNTLFVENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPDKVLTEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEDAIAKRQGKGNSEINLQIDAYLPQNYMSDERQKIEIYKRIREIDDREDYLQLQDEIIDRFGEYPDQVAYLLEIGLLKSYMDQAFVELVERKDKIITIKFEK
>P643758437 YP_002745441 SEQ_0007 transcription-repair coupling factor [Streptococcus equi equi 4047]
GLSGSSKAAAIASAYLKLVVVTSTQNDMEKLAGDLSALLDEGSIFQFFADDTAAAEFIFSSMDKTISRIEALAFLGILVISLAGLRILLPSPKTFQQGQIDLAVGVDTDLDNVVKKLVKIGYQRVAQVLSPGEFSRRGDILDVYEVTQDLPVRIEFFGDEIDGIRSFDIESQKSLQKKDSTSIKPASDMIFEPEKHKDIRKFQSLFYTILDYLPKGTPDEIKRYQKSGATVLLQVESHQAYERLAKSLEAIIIGHLAGGFYFADLVLITEHEIYHKNAERLKDYNELSKGDYVVHSVHGIGRFLGIETINIG-VHRDYVTIQYQQSDRISLPVDQLESLSKYVSADGKEPKINKLNDGRFQKAKQRVKKQVEDIADDLLKLYAERSQQKGFQFSPDDELQRAFEEDFAFVETDDQVRSIKEVKKDMESVRPMDRLLVGDVGFGKTEVAMRAAFKAIGDHKQVAILVPTTVLAQQHYENFRERFENYPVEIAVLSRFRSKKEQSESLERLKKGQVDIIIGTHRLLSKDVIFSDLGLIVIDEEQRFGVKHKETLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLENNPGLIREAIIREMDRGGQVFYVYNKVDTVDKKVAELQELVPEASIGFVHGQMSDIQLENTLMDFINGDYDVLVATTIIETGVDISNVNTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYKPDKVLTEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFDMYSQLLEQAIASKQ-GGNAEINLHIDAYLPSDYIKDERQKIDIYKRIREIDSRAAYSDLQDEIMDRFGDYPDQVAYLLEIGLLKYYLDTAFAELVEKRDHQVMVRFES
>P643756476 YP_002743572 SZO_00070 transcription-repair coupling factor [Streptococcus equi zooepidemicus H70]
GLSGSSKAAAIASAYLKLVVVTSTQNDMEKLAGDLSALLDEGSIFQFFADDTAAAEFIFSSMDKTISRIEALAFLGILVISLAGLRILLPSPKTFQQGQIDLAVGVDTDLDNVVKKLVKIGYQRVAQVLSPGEFSRRGDILDVYEVTQDLPVRIEFFGDEIDGIRSFDIESQKSLQRKDSTSIKPASDMIFEPEKHKDIRKFQSLFYTILDYLPKGTPDEIKRYQKSGATVLLQVESHQAYERLAKSLEAIIIGHLAGGFYFADLVLITEHEIYHKNAERLKDYNELSKGDYVVHSVHGIGRFLGIETINIG-VHRDYVTIQYQQSDRISLPVDQLESLSKYVSADGKEPKINKLNDGRFQKTKQRVKKQVEDIADDLLKLYAERSQQKGFQFSPDDELQKAFEEDFAFVETDDQVRSIKEVKKDMESIKPMDRLLVGDVGFGKTEVAMRAAFKAIGDHKQVAILVPTTVLAQQHYENFRERFENYPVEIAVLSRFRSKKEQSESLERLKKGQVDIIIGTHRLLSKDVIFSDLGLIVIDEEQRFGVKHKETLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLENNPGLIREAIIREMDRGGQVFYVYNKVDTIDKKVAELQELVPEASIGFVHGQMSDIQLENTLMDFINGDYDVLVATTIIETGVDISNVNTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYKPDKVLTEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFDMYSQLLEQAIASKQ-GGNAEINLHIDAYLPSDYIKDERQKIDIYKRIREIDSRAAYSDLQDEIMDRFGDYPDQVAYLLEIGLLKYYLDTAFAELVEKRDHQVMVRFES
>P637523103 YP_059324 M6_Spy0006 Transcription-repair coupling factor [Streptococcus pyogenes MGAS10394]
GLSGSSKALAIASAYLKIVVVTSTQNEVEKLASDLSSLLDEELVFQFFADDVAAAEFIFASMDKALSRIETLQFLGVLIVSLSSLRTLLPNPDVFTKSQIQLTVGEDYDSDTLTKQLMTIGYQKVSQVISPGEFSRRGDILDIYEITQELPYRLEFFGDDIDSIRQFYPETQKSFEQLEGIFINPASDLIFEASKHKDIRKFQSLFYSLLDYIPKGTPDEIKRYQKNQTTVIVQVESQYAYERLEKSFQDIVIGAISSGFYFADLALITEHEIYHKNAERLKDYNELAVGDYVVHNVHGIGRFLGIETIQIG-IHRDYVTIQYQNSDRISLPIDQIGSLSKYVSADGKEPKINKLNDGRFQKTKQKVARQVEDIADDLLKLYAERSQQKGFSFSPDDDLQRAFDDDFAFVETEDQLRSIKEIKADMESMQPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVAVLVPTTVLAQQHYENFKARFENYPVEVDVLSRFRSKKEQAETLERVQKGQIDIIIGTHRLLSKDVVFSDLGLIVIDEEQRFGVKHKETLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLENNPGLVREAIIREMDRGGQIFYVYNKVDTIEKKVAELQELVPEASIGFVHGQMSEIQLENTLIDFINGDYDVLVATTIIETGVDISNVNTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPDKILTEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEQAIASKQGKGNTEINLQIDAYLPDDYIADERQKIDIYKRIREIQSREDYLNLQDELIDRFGEYPDQVAYLLEIALLKHYMDNAFAELVERKNNQVIVRFEV
>P643400262 YP_002285065 Spy49_0006 Transcription-repair coupling factor [Streptococcus pyogenes NZ131]
GLSGSSKALAIASAYLKIVVVTSTQNEVEKLASDLSSLLDEELVFQFFADDVAAAEFIFASMDKALSRIETLQFLGVLIVSLSGLRTLLPNPDVFTKSQIQLTVGENYDSDTLTKQLMTIGYQKVSQVISPGEFSRRGDILDIYEITQELPYRLEFFGDDIDSIRQFHPETQKSFEQLEGIFINPASDLIFEASKHKDIRKFQSLFYSLLDYIPKGTPDEIKRYQKNQTTVIVQVESQYAYERLEKSFQDIVIGAISSGFYFADLALITEREIYHKNAERLKDYNELAVGDYVVHNVHGIGRFLGIETIQIG-IHRDYVTIQYQNSDRISLPIDQIGSLSKYVSADGKEPKINKLNDGRFQKTKQKVARQVEDIADDLLKLYAERSQQKGFSFSPDDDLQRAFDDDFAFVETEDQLRSIKEIKADMESMQPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVAVLVPTTVLAQQHYENFKARFENYPVEVDVLSRFRSKKEQAETLERVRKGQIDIIIGTHRLLSKDVVFSDLGLIVIDEEQRFGVKHKETLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLENNPGLVREAIIREMDRGGQIFYVYNKVDTIEKKVAELQELVPEASIGFVHGQMSEIQLENTLIDFINGDYDVLVATTIIETGVDISNVNTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPDKILTEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEQAIASK-QGGNTEINLQIDAYLPDDYIADERQKIDIYKRIREIQSREDYLNLQDELMDRFGEYPDQVAYLLEIALLKHYMDNAFAELVERKNNQVIVRFEV
>P637346616 NP_720493 SMU.08 putative transcription-repair coupling factor [Streptococcus mutans UA159]
GFSSSSKALAIAAAYKKIVIVTSTQNEAEKLATDLISLIGEEEVYQFFADDVAAAEFIFASQDRTNSRVESLNFLGILMTSIVGIRILLPSPQNYQAAQFKLKVGEEYNLDNIIKQLSNIGYQKVAQVYNPGEFSKRGDILDIYEINQPYPYRLEFFGDEIDGIRTFDPDDQRSLSNLDSFILIPSDDIILTDSRHQDVRKFLSFFYTLLNYLPEQTPDEIRRYQKSEMTVLLQTDSQQSQGRLQKALQGLTIGNLSTGFYFADLVLITEREIFHKNAERLKDYNELEKGDYVVHNVHGIGRFLGIETIEVG-VHRDYLTIQYQNADRISIPIEQIELLSKYVASDGKEPKINKLNDGRFQRIKQKVSKQVEDIADDLLKLYAERSQLKGFAFSPDDKNQEEFDNDFAYVETEDQLRSIKEVKKDMEKDQPMDRLLVGDVGFGKTEVAMRAAFKAVNDDKQVAVLVPTTVLAQQHYNTFKERFENFPVNVAMMSRFKTKTEQSETLTKLAKGQVDIIIGTHRLLSKDVTFKDLGLLVIDEEQRFGVKHKETLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPSNRYPVQTYVMETNASVIREAIMREIDRGGQIFYIYNRVDTIDKKVAELRELIPEANIGFVHGKMSEIQLENTLLDFISGEYDLLVTTTIIETGIDISNVNTLFIENADYMGLSTLYQLRGRVGRSNRIAYAYLMYHPDKILTEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNILGSSQSGFIDSVGFEMYSQLLEEAIAAKQ-GGNAEINLQIDAYLPTNYISDERQKIEIYKRIREIESKTDYQALQDELIDRFGDYPDQVAYLIEIGLLKAYLDDAFVESLDRKQNS-VVCFES
>P640513303 YP_001197382 SSU05_0008 Transcription-repair coupling factor (superfamily II helicase) [Streptococcus suis 05ZYH33]
GLSGTSKSLIMATAYDKIMIVTATQNDAEKLVADLTAIG-SENVYNFFTDDSPIAEFVFASKERTQSRIDSLNFL-ILVASIVACRVLLPSPETYKGSKIQLEVGQEIEVDKLVKNLVNIGYKKVSRVLTQGEFSQRGDILDIFDMQSETPYRIEFFGDEIDGIRIFDVDSQKSLENLDEISISPASDIILSSERHPDLRKFLSCIYTLLDYLPKS--DELTRYAKSNNTVVIQASSDVSLQTLQKNLQEVTIGQLASGFEK--LVFITEKEIFNKNAERIKDYSELAVGDYVVHHVHGIGQYLGIETIEISGIHRDYLTVQYQNSDRISIPVEQIDLLSKYLASDGKAPKVNKLNDGRFQRTKQKVQKQVEDIADDLIKLYAERSQLKGFAFSPDDENQVEFDNYFTHVETDDQLRSIDEIKKDMEKDSPMDRLLVGDVGFGKTEVAMRAAFKAVNDGKQVAILVPTTVLAQQHYANFQERFAEFPVNVDVMSRFKTKAEQEKTLEKLKKGQVDILIGTHRLLSKDVVFADLGLLVIDEEQRFGVKHKERLKELKKKIDVLTLTATPIPRTLQMSMLGIRDLSVIETPPTNRYPVQTYVMETNPSVIRDAMLREIDRGGQVYYLYNKVDTIEQKVSELKELVPEATIGYVHGQMSEIQLENTLYAFVEGEYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGRVGRSSRIAYAYLMYRPDKSLTEVAEKRLEAIKGFTELGSGFKIAMQDLSIRGAGNILGAAQSGFIDSVGYEMYSQLLEQAILEKQ--SNSEVNLQIDAYLPSDYIGDQRQKIEIYKRIKNIDSRVNYQELQEELIDRFGEYPDVVAYLLEIGLLKSFLDQVFCHTVL-RRQHQVTTFE-
>P640515560 YP_001199571 SSU98_0011 Transcription-repair coupling factor (superfamily II helicase) [Streptococcus suis 98HAH33]
--------------------MLTDDLQKGKTVSSLKYFA---S-----TYA-------------------ELRKY---------------------------KPATF--FSSFQKGLGNVKFDAL------------------YQFT-QHPMQ-EFF-------------------------------------------HQIPLLKELTRYAKSNTVKNLQEY-----DIHLPVHAADK-------LVEVTIGQLASGFMDEKLVFITEKEIFNKNAERIKDYSELAVGDYVVPHVHGIGQYLGIETIEISGIHRDYLTVQYQNSDRISIPVEQIDLLSKYLASDGKAPKVNKLNDGRFQRTKQKVQKQVEDIADDLIKLYAERSQLKGFAFSPDDENQVEFDNYFTHVETDDQLRSIDEIKKDMEKDSPMDRLLVGDVGFGKTEVAMRAAFKAVNDGKQVAILVPTTVLAQQHYANFQERFAEFPVNVDVMSRFKTKAEQEKTLEKLKKGQVDILIGTHRLLSKDVVFADLGLLVIDEEQRFGVKHKERLKELKKKIDVLTLTATPIPRTLQMSMLGIRDLSVIETPPTNRYPVQTYVMETNPSVIRDAMLREIDRGGQVYYLYNKVDTIEQKVSELKELVPEATIGYVHGQMSEIQLENTLYAFVEGEYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGRVGRSSRIAYAYLMYRPDKSLTEVAEKRLEAIKGFTELGSGFKIAMQDLSIRGAGNILGAAQSGFIDSVGYEMYSQLLEQAILEKQ--SNSEVNLQIDAYLPSDYIGDQRQKIEIYKRIKNIDSRVNYQELQEELIDRFGEYPDVVAYLLEIGLLKSFLDQVFCHTVL-RRQHQVTTFE-
>P640913712 YP_001451365 SGO_2140 transcription-repair coupling factor [Streptococcus gordonii Challis CH1]
GLSGSTKALAIASALDKILVMTSGYSEAEKLSSDLISLLGEEKVYNFLADDAPMAEFIFSSQEKIYARLGALNFLGILVTNLSASRLFLPNPNELKSSILELKVGQEYSLDSLVNFLIKIGYRKESQVFNQGEFSLRGDILDIFDKDSISPYRLEFFGDEIDGIRIFDSESQTSIENLNQVLIHPANDILLADELHPDSRKFLSYFYTILDYLPKHTPDEIDRYKKAGSTVILQASSLSSLQSLHKTLQEIIQGNLNQGFVDQKLVLITEYEIFQKNAERLKDYNELEKGDYVVHNIHGIGRYLGIETIEISGIHRDYVTIQYQNADRVSIPVDQIQLLSKYVASDGKTPKVNKLNDGRFQKTKQKVQHQVEDIADDLIKLYAERSQLEGFSFSSDDENQIEFDNDFPYVETEDQLRSIQEIKKDMESKQPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVAILVPTTVLAQQHYTNFKERFNDFAVNVDVLSRFRTKAEQSETLEALKKGQVDIIIGTHRLLSQDVEFADLGLIVIDEEQRFGVKHKEKLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLESNPTIIRDAILREIDRGGQVYYLYNKVDTIEQKVAELKELIPEASIGFVHGQMSEIRLENTLIDFINGEYDVLVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYFMYRPDKTLTEVAEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEEAIAKKQ-GSNAEINLQIDAYLPSDYISDERQKIEIYKRIREIDNRVNYEDLQEELIDRFGEYPDVVAYLLEIGLLKSYLDKSFVSLVERRQQT-VVRFES
>P640103073 YP_001034027 SSA_0008 Transcription-repair coupling factor, putative [Streptococcus sanguinis SK36]
GLSASTKAITIAAGLEKILVLTSSQNEADRLASDLISLLGEDKVYTFLADDTPIAEFVFASQEKIFSRLDALNFLGILVTNVAASKLLLPDPIDFKTTNINLIVGQEYDLNNLVKMLSRTGYKKVSQVLSQGEYSLRGDILDIFERSAEFPYRLEFFGDEIDGIRIFNPENQTSIENIESILIKPASDILLSEKHHADIRKFLSYFYTILDYLPVH--EEINRYKKSGYTIILQANSSAGLQSLHKNLQELIEGNLVQGFVDEKIVLITEYEIIHKNAERLKDYNELEKGDYVVHNIHGIGRYLGIETIEISGVHRDYLTIQYQNSDRISIPVDQIDLLSKYVASDGKTPKVNKLNDGRFQKSKQKVQHQVQDIADDLIKLYAERSQLKGFAFSADDSNQEEFDNDFPYVETEDQLRSIQEVKKDMESSRPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVAVLVPTTVLAQQHYTNFKERFNDFAVNVEVLSRFRSKAEQKQTLEKLQKGQVDIIIGTHRLLSKDVEFADLGLIIIDEEQRFGVKHKETLKELKKKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLESNPTVIREAVLREIDRGGQVYYLYNKVDTIEQKVSELRELIPEASIGYVHGQMSEIRLENTLLDFINGEYDILVTTTIIETGVDIPNANTLFVENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPDKILTEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNILGSMQSGFIDSVGFEMYSQLLEEAIAKKQ--SNAEINLQIDAYLPSDYISDERQKIEIYKRIREIDSRVNYENLQDELIDRFGEYPDVVAYLLEIGLAKSYLDQAFVKSVE-RQQNTVMHFE-
>P639662689 YP_805015 PEPE_1552 Transcription-repair coupling factor (superfamily II helicase) [Pediococcus pentosaceus ATCC 25745]
GLLEPAKQLFLSTIIEPILYVTDSLARAEHVYNMFKEEQSEIDTYWFPAEEIIAAEVATSSPNYRTARIQFLSALGIFITSTSGLRRLVPEPKDVIEARITLEVGAEYEFQTLISDLNALGYQRVEQVEKKGEFAVRGSVVDIFPLNQDDPIRMDFFDIEIDSLRTFDQATQRSIENIEKIEVLPATDLIINETLIQEDTMYAKQLYSLLDYLT-KGTGEVERWLARKQTVLIFANSKERQGKITEVLHDIIGQSFPQGFDMPSLVVLTEKELFAKNAERLKSYTELKTGDYVVHVNHGIGKFMGMTTMEVG-VHQDYMTIQYKGSGQLFIPVTQLNLVQKYVAAEGKSPKLNKLGGSDWAKTKKNVASKIEDIADDLIELYAKREAEKGFAFKPDDSYQRQFDNDFPYTETPDQLRSIEEIKKDMERERPMDRLLVGDVGYGKTEVALRAAFKAVESGKQVAILVPTTILAQQHFDTMNERFEGYPIATGILSRFQTGAQVKETLEGLKDGSVDVIVGTHRLLSKDVEFKDLGLLVIDEEQRFGVKHKERIKELKSQVDVLTLTATPIPRTLNMSMIGVRDLSVIETPPTNRYPIQTYVMEENAGAIREGIMREMRRNGQVFYLHNRVQDIEKVVAEIEALVPEARVGYIHGQMTEKQLEDILFEFIAGEYDVLVTTTIIETGIDIPNANTLFVENADHMGLSQLYQLRGRIGRSSRVAYAYFLYQKNRVLTELGEKRLEAIKDFTELGSGFKIAMRDLSIRGAGNLLGKQQHGFIDSVGYDLYSQMLADAVKKK-QGSDSEISLGIEGFLPSSYIEDEQQKIEFYKRLRQANSHEEVVDIQDDMLDRFGDYPAEVDNLLQITDLKIIADQVQVERITRKDGILTVMTRA
>P641713592 YP_001843031 LAF_0215 transcription-repair coupling factor [Lactobacillus fermentum IFO 3956]
GVSGSAKTLLLAALQGPQLVVCDSLYHMQELVADLENLLGEDQVFAFPVEEVLATEVATASPDYRLQRVQALNTLAVVVTDAAGLRRRLPKPGDFQAATLTVEVGGELDPTTVGTQLMAMGYQRQKMVLKPGDFAMRGSIVDIYALNTAHPVRIDLFDTEVDSLRYFDAESQRSVENIRAVTILPATDFIAPPALPVEMLEYADRVYSLLDYLPAKSNGELKRWQSQGATVVIMANSPERRNQVATTLADLVAATLANGFEMPPLVVITEAEMFKQNAERIKSYTDLKPGDYVVHVNHGIGLFAGIKTMEVG-VHQDYMVLDYRDNAQIFVPVTQLNLVQKYVSAESKTPRLNRLGGVEWAKTKRRVAAKIEDIADDLVDLYAKRETEKGFAFPKDDYLQEKFDDEFPYAETKDQLQSIQEIKADMERPRPMDRLLVGDVGYGKTEVALRAIFKAVAGGKQVAFLVPTTILAQQHYDTMKARFEGFPVTIALMSRFKTAKELKETDRGLLNGEIDIVVGTHRILSKDVQFKDLGLLIVDEEQRFGVKHKERLKQLKANVDVLTLTATPIPRTLHMSMMGVRDLSVLETPPTGRYPIQTYVLEQNGAVIRDGILREMQRGGQVYYLHNRVHDIERVVAQLAELVPEARIGYIHGQMSENELEGVLYDFIRGEYDVLVTTSIIETGVDIANVNTLFVEDADRLGLAQLYQIRGRIGRSNRVAYAYFMYQENKVLTEQGEKRLAAIRDFTELGSGFKIAMRDLSIRGAGNLLGKQQHGFIDSVGYDLYTEMLADAVATKQGKSNAEVELGVEAYLPSTYVDDQRQKIELYKQIRRAKSEEELTELAGDLIDRFGDYQTPVANLLTIGTIKLYADQAMLSEIERKRDNIYVNFTV
>P640590058 YP_001270869 Lreu_0262 transcription-repair coupling factor [Lactobacillus reuteri F275]
GISGSARTELLSALSKPILVVTDTISHMQELASDLENLLPANRVYQFPVEEVLAAEVATSSPNYRLQRVLALNALAVVVASAAGLRRNIISPEYFAQSSLKIKTGGEVDPVKIRQQLSAMGYQYQKMVLRPGDFAIRGSIIDIYALNTDNPVRIDLFDTEVDSLRYFDASTQRSIDNVEEVQILPATDFIIPATLPNELLEFSNLVYSLFDYLPDDGTAELQRWIDQGQTVILMANSPERRKQIAQTLADIVAANLNNGFEMPLLVVITESEMFKQNAERLKNYTDLKPGDYVVHVNHGIGIFSGIKTMEVH-VHQDYMIINYRDNAQIYVPVTQLNLVQKYVSSESKTPHINKLGGNEWAKTKRRVSSKIEDIADELVDLYAKREAEKGYAFPKDDYLQKQFDANFPYNETRDQLRSIDEIKEDMEKPKPMDRLLVGDVGYGKTEVAMRAIFKAVTGGKQVAFLVPTTVLAQQHYNTLMRRFEGFPINIALMSRFKTPKELKETEAGLKDGSVDVVVGTHRILSKDVEFKDLGLLIVDEEQRFGVKHKEKLKQLKNNVDVLTLTATPIPRTLHMSMLGVRDLSVLETPPAGRYPIQTYVMEQNSSAIRDGIIREMQRGGQVYYLHNRVHDIEETVAWLQELVPEARIGYINGQMSENELETVLYEFIQGNYDVLVTTSIIETGVDIPNANTLFVENADRMGLAQLYQIRGRIGRSNRVAYAYFMYQPNKVLTELGEKRLAAIRDFTELGSGFKIAMRDLAIRGAGNLLGKQQHGFIDSVGYDLYSAMLSDAVAKKQ-GSDAEVELGVEAYLPTDYIADQRQKIELYKTIRQAKTDEEIIDIQGDLIDRFGDYPAPVGTLLLVSQLKNHADLAMIAEIKRQRDNINIKFTE
>P642583962 YP_001841248 LAR_0252 transcription-repair coupling factor [Lactobacillus reuteri F275, JCM1112]
GISGSARTELLSALSKPILVVTDTISHMQELASDLENLLPANRVYQFPVEEVLAAEVATSSPNYRLQRVLALNALAVVVASAAGLRRNIISPEYFAQSSLKIKTGGEVDPVKIRQQLSAMGYQYQKMVLRPGDFAIRGSIIDIYALNTDNPVRIDLFDTEVDSLRYFDASTQRSIDNVEEVQILPATDFIIPATLPNELLEFSNLVYSLFDYLPDDGTAELQRWIDQGQTVILMANSPERRKQIAQTLADIVAANLNNGFEMPLLVVITESEMFKQNAERLKNYTDLKPGDYVVHVNHGIGIFSGIKTMEVH-VHQDYMIINYRDNAQIYVPVTQLNLVQKYVSSESKTPHINKLGGNEWAKTKRRVSSKIEDIADELVDLYAKREAEKGYAFPKDDYLQKQFDANFPYNETRDQLRSIDEIKEDMEKPKPMDRLLVGDVGYGKTEVAMRAIFKAVTGGKQVAFLVPTTVLAQQHYNTLMRRFEGFPINIALMSRFKTPKELKETEAGLKDGSVDVVVGTHRILSKDVEFKDLGLLIVDEEQRFGVKHKEKLKQLKNNVDVLTLTATPIPRTLHMSMLGVRDLSVLETPPAGRYPIQTYVMEQNSSAIRDGIIREMQRGGQVYYLHNRVHDIEETVAWLQELVPEARIGYINGQMSENELETVLYEFIQGNYDVLVTTSIIETGVDIPNANTLFVENADRMGLAQLYQIRGRIGRSNRVAYAYFMYQPNKVLTELGEKRLAAIRDFTELGSGFKIAMRDLAIRGAGNLLGKQQHGFIDSVGYDLYSAMLSDAVAKKQ-GSDAEVELGVEAYLPTDYIADQRQKIELYKTIRQAKTDEEIIDIQGDLIDRFGDYPAPVGTLLLVSQLKNHADLAMIAEIKRQRDNINIKFTE
>P637413505 NP_814051 EF0257 transcription-repair coupling factor [Enterococcus faecalis V583]
GLSGSAKTLLMAGALQKIVIAVPNLYYANQLVDDFLNILPSEQVHLFPVDEVLSAEMAFSSPEARADRVSALNFLGIVVVPVAGLRKYLPTKETWQNAQLYWEIGTEVEPEILAQRLVLMGYERQAMVGKPGEFSIRGSIVDVYPLNAEYPVRVELFDVEIDSIRYFEADTQRSLENLEEVTISPMTDLVFSKAPTENAHYYTDFLYTLLDYLPENSLAEVDRWQKQNQTVVVFVPTKERIQKVEELFQDIVQGALQTGFELPKLVAITEKEIFHTNAERLKSYSDLKTGDYVVHANHGIGKYIGMETLEVG-VHQDYMTILYQNDDKLFIPVTQLNLIQKFVASESKTPKINKLGGSEWTKTKRKVASKIEDIADDLILLYATRESEKGYAFPPDDAYQKEFEEAFPYSETDDQLRSAAEIKHDMEKSRPMDRLLVGDVGFGKTEVALRAAFKAVSNNKQVAFLVPTTILAQQHYETIQERFEGFPVEIGLLSRFRTKKQQNETIEKIKHGQVDIVIGTHRLLSQDINFSDLGLLIIDEEQRFGVKHKERLKQLRSQVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPENRYPIQTYVMENNPGAIREAIEREMARDGQVFYLYNRVDTIERKVEELQALVPDARIAYAHGQMTEVQLENTLFDFIEGQYDILVTTTIIETGVDIPNANTLFVENADYMGLSTLYQLRGRVGRSNRVAYAYFMYEQQKILNEVSEKRLEAIKDFTELGSGFKIAMRDLSIRGAGNLLGAQQHGFIDSVGFDMYSQMLSEAVARKQG-TSVEIDLGIDAYIPGTYITDERQKIEIYKRIRQLENMDMYEELEADLLDRFGEYPDEVAHLLTTGRIKMDGDRALLESIRRDQK-VKFVLSK
>P637929478 YP_536248 LSL_1360 Transcription-repair coupling factor [Lactobacillus salivarius salivarius UCC118]
GLVGSSKTLMIAKLLKPQLIVESDLYHAQQLQSDLENIIEDTRIELFPVEDMLVAEMATSSPEYRAQRVSALTALVIVITTVAGIRRFLPSVEYWKQHEIQLEIGKEVDPAELEKKLFEMGYIRSNMVNAPGDFAIRGSIVDIFPLDADNPYRIDFFDIEIDSMRTFDIANQRSIENVDQVTIIPATDFIASKELKAEYLPYAEYIYNLIDYLSDEGLTEVSRWEKQKQTVVFLINDRERLEKVSQTLDDVVQGFLNEGFEIPKLVVLTENELFSNNAERLKSYTELKKGDYVVHVNHGIGRYMGMQTLEVG-HHHDYMTILYQDDAKLFIPVSQLDKIQKYVSSESKTPRVNKLGGSEWAKTKRRVANKIEDIADELVDLYAKREAEKGYAFTPDDSYQKEFEDAFPYTETPDQLRSAKEIKQDMEKTKPMDRLLIGDVGYGKTEVALRAAFKAVQDGKQVAFLAPTTVLAQQHYETMEQRFENFPVEIGILSRFNTAKEIKETIENLETGKLDIVVGTHRLLSKDVKFADLGLLIIDEEQRFGVKHKERLKELKTSVDVLTLTATPIPRTLNMSMLGVRDLSVIETAPMNRYPIQTYVIEKNYGVIVDGIKREIERGGQVFYLHNRVDDIEKVASELESLVPEAKVAYIHGRMTETQLENILIDFIDGEYDVLVTTTIIETGVDIPNVNTLFVDNADRMGLSQLYQLRGRVGRSNRIAYAYFMYQPNKVLTEVAEKRLEAIKDFTELGSGFKIAMRDLSIRGAGNLLGKQQHGFIDSVGYDLYTQMLNDAVAKKR-GTDAELNLDLEAYLPADYITDPKQKVEIYKRIHQFENEDQYIEVQDDLIDRFGEYPIEVHNLLEVGLLKMYADAALVDSVSQNKKTIEIELSD
>P639652707 YP_794705 LVIS_0516 Transcription-repair coupling factor (superfamily II helicase) [Lactobacillus brevis ATCC 367]
GLNGSAETLFIASLLHSLVYVTDTLYHASQLVDDLANLLDDDELFDFPVEELLAAEVATSSPEYRSARIDALRALVVVVTSLSGLRRFLPTPANFAAARFTVSVGDEFDLEALQQKLFAMGYAHQKLVAAPGDFAVRGSIIDIYPLAADYPIRIDFFDTEVDSLRYFDPATQRSIDNGQTVEVLPATDFILTADVDPQLLEFADYLFQVLDYLPDDGVTEIDRWHKQQQTVVLLVQDEERLAKIEQTLDDLVPERLQTGFELPELVVITEAEMFQKNAERLKSYTDLKPGDYVVHVNHGIGKFIGMQTLTVG-VHQDYMTIDYQDNAQLFIPVTQLNLIQKYVSSEDKKPKINKLGGSEWAKTKSKVAAKIEDIADELVDLYAKRSAEKGYAFPVDDSLQHDFENDFPYAETPDQLRTIEEVKHDMEKPRPMDRLLVGDVGYGKTEVALRAAFKAVEAGKQVAFLVPTTILAQQHYDTMVSRFEGYPINVEMFSRFRTTKQIHQAIKDLETGQLDIVVGTHRLLSQDVKFKNLGLVLVDEEQRFGVKHKERLKQLKANVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPANRFPIQTYVMEQNAGAIQDGIRREMQRGGQVFYLHNRVDDIEKTVGQIQVLVPEARVGYIHGKMTEAQLEGVLFDFLRGDYDVLVTTTIIETGIDIPNANTLFVENADRMGLSQLYQLRGRIGRSNRVAYAYFTYQPNKVLTEVSEKRLEAIKDFTELGSGFKIAMRDLSIRGAGNLLGKQQHGFINSVGYDLYTQMLSDAVAKKRGQTDTTIELGVEAYLPSDYIEDEQQKIEMYKRIRQLEDDDEVSEIQADLIDRFGEYPPAVDQLLTIGQLKLAADLALVDKIRRVNGDVFVTVSK
>P637387877 NP_784316 lp_0539 transcription-repair coupling factor [Lactobacillus plantarum WCFS1]
GLNGSARTVYLSALFHSLLIVTDNGFHASQLVDDLTSLLDEDQVFLFPAEEMIATEVATSSPESRAQRVQALNALAVVVTSVAGARRFLPPVAQFQAATLPVAVGQDIDLEDLQRQLHDMGYVKEKLVARPGDFAVRGSIVDIYPLDADYPLRLDFFDTEVDTLKYFDPETQRSVENLDEYTILPATDFILTSAIGNDLLLYGDYLYSIFDYVAADGLTELDRWHKLKQTVVLMVSEAERLTKVSDTLDDIVQGSLQNGFEFPDLVIVTEQEMFKKNAERLKSYTDLKPGDYVVHVNHGIGKYVGMETLEVG-VHQDYITIAYQNNAKIFIPVTQLNLVQKYVSSESKTPRINKLGGTEWTKAKRKVAAKIEDIADELVDLYAKREAEKGYAFPPDDSYQDDFDNDFPYPETPDQIRSINEIKHDMERPKPMDRLLVGDVGYGKTEVALRAAFKAIEAGKQVAFLVPTTILAQQHYETMLNRFEGYPINVGMLSRFRTTKEMKETVQQLKSGEIDIVVGTHRLLSKDVAFADLGLLIIDEEQRFGVKHKERLKALKASVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPTNRYPIQTYVMEQNFGVIKEGIEREMQRNGQVFYLHNRVHDIDKVVAQIKDLVPDAAVAHIDGQMPESQLEGILYDFIRGEYDVLVTTTIIETGVDIPNVNTLFVENADRMGLSQLYQLRGRIGRSSRVAYAYFTYQQNKVLTEVGEKRLQAIKDFTELGSGFKIAMRDLSIRGAGNLLGKQQHGFIDSVGYDLYTQMLSEAVAKKRGQTDATVELGIEAYLPTSYIEDERQKIEIYKRIRQLENNDQYMEVQDDLMDRFGDYPVEVAGLLAVGKLKLLADDALIEKIQRDDSELHLTLSK
>P639665460 YP_807712 LSEI_2547 Transcription-repair coupling factor (superfamily II helicase) [Lactobacillus casei ATCC 334]
GLSGSAKTVFFGALLQQILIVENNRFHADELAADLSSLLGDAMVYDFPVEDVLAAEVAVSSPETRNDRINALTFIGIIVTSLAGYKRLLPSPADWAASELAIDMTSELDPQTVAKQLVAMGYRRDSLVSAPGQFAIRGGIIDVYPLNQDDPIRIELFDTEIDSIRSFDIATQRSLQKLQQITIAPATDMVATDQRPENLALYAAELYRISDYLQPDALTETDRWVKQQQTVVFLITDKNRLEKLSETLSDLTEGSLKNGFELPDLVVVTEHELFNANTERLRSYNELKPGDYVVHVNHGIGQYTGMETLEVG-VHRDYITIVYRNNDKLFIPVDQLNLVQKYVSADGKTPSVNKLGGAEWQKTKRKVAARIEDIADELIDLYAKREAEKGFAFGPDDDLQHKFEAEFPYPETPDQLRSAKEIKHDMEKPKPMDRLLVGDVGFGKTEVALRAAFKAIDYGKQAAILVPTTILAQQHFDTMKERFADFPIKVGLLSRFQTAHQNKETIKGLKNGTIDIVVGTHRLLSKDVAFRDLGLLVIDEEQRFGVKHKERIKQLKSNVDVLTLTATPIPRTLNMSMLGVRDLSVIETPPTNRYPIQTFVMEQNPGVIREAIEREMERGGQVFYLHNRVEDMERTVSQLEELVPDASVGYAHGQMTETQLENVIYDFLHGAYDVLVTTTIIETGVDMPNANTLIIENADHYGLSQLYQLRGRIGRSSRVAYAYFMYQPMKVLNEVAEKRLQAIKDFTELGSGFKIAMRDLSIRGAGNLLGKQQHGFIDSVGYDLYTQMLQEAVNKRRG-TDAEIDLGLEAYLPTDYVADSRQKIELYKRIREADSDEAETEISEDLIDRFGDYPQPVTNLLAIAHLKRFADLAWVNHVTAGQK-LTVVLSS
>P642709496 YP_001988623 LCABL_27140 Transcription-repair coupling factor (TRCF) [Lactobacillus casei casei BL23]
GLSGSAKTVFFGALLQQILIVENNRFHADELAADLSSLLGDAVVYDFPVEDVLAAEVAVSSPETRNDRINALTFIGIIVTSLAGYKRLLPSPADWTASELAIDMTSELDPQTVAKQLVAMGYRRDSLVSAPGQFAIRGGIIDVYPLNQDDPIRIELFDTEIDSIRSFDIATQRSLQKLQQITIAPATDMVATDQRPENLALYAAELYRISDYLQPD--TETDRWVKQQQTVVFLITDKNRLEKLSETLSDLTEGSLKNGFELPDLVVVTEHELFNANTERLRSYNELKPGDYVVHVNHGIGQYTGMETLEVDGVHRDYITIVYRNNDKLFIPVDQLNLVQKYVSADGKTPSVNKLGGAEWQKTKRKVAARIEDIADELIDLYAKREAEKGFAFGPDDDLQHKFEAEFPYPETPDQLRSAKEIKHDMEKPKPMDRLLVGDVGFGKTEVALRAAFKAIDYGKQAAILVPTTILAQQHFDTMKERFADFPIKVGLLSRFQTAHQNKETIKGLKNGTIDIVVGTHRLLSKDVAFRDLGLLVIDEEQRFGVKHKERIKQLKSNVDVLTLTATPIPRTLNMSMLGVRDLSVIETPPTNRYPIQTFVMEQNPGVIREAIEREMERGGQVFYLHNRVEDMERTVSQLEELVPDASVGYAHGQMTETQLENVIYDFLHGAYDVLVTTTIIETGVDMPNANTLIIENADHYGLSQLYQLRGRIGRSSRVAYAYFMYQPMKVLNEVAEKRLQAIKNFTELGSGFKIAMRDLSIRGAGNLLGKQQHGFIDSVGYDLYTQMLQEAVNKRR-GTDAEIDLGLEAYLPTDYVADSRQKIELYKRIREADSDEAETEISEDLIDRFGDYPQPVTNLLAIAHLKRFADLAWVNHVTKAGQKLTVVLSP
>P637796202 YP_396217 LSA1604 Transcription-repair coupling factor (TRCF) [Lactobacillus sakei sakei 23K]
GLSGSAKTLFLATIYKPLLIIESNMFQANQVAEDLANQLNGDQIYTFPVEEVMAAEIAVSSPESRAERVRTLSFLGIVVTSVAGMRRLLPTARQWRDSQTQIEMGSEVDPKILGAQLAEMGYHRDKLVGKPGEFAMRGDIIDIFPLDTENPVRIELFDTEVDAIRSFEADTQRSIENLESVAIMPATDLLANAARLENLALFVDYLYSLIDYFKNSGLTEMSRWQKQQQTVVVLVSDAKRVKKIDQTFHDIVQGSLQNGFELPDLVVLTEKELFNTNAERLKSYSELKPGDYVVHVNHGIGEYVGMETLEVG-VHQDYITILYRDNGKLFIPVTQLDMVQKYVSAESKTPKINKLGGAEWQKTKSKVSAKIEDIADDLIELYAQREAEKGYAFPKDDQLQADFENQFAYPETDDQLRSTAEIKHDMEKVRPMDRLLVGDVGFGKTEVALRAAFKAVAAGKQVAFLVPTTILAQQHYENMLARFADFPVELGLLSRFKTRKEVTATLKGLEKGQVDIVIGTHRLLSKDVVFKDLGLLIVDEEQRFGVKHKERLKQLKAQVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPTNRYPIQTYVMEQNAGAMREAIERELERNGQVFYLHNRVSDIEQTVDEIQALVPEATVGYAHGQMTEAQLEGVIYDFVQGKYDVLVTTTIIETGVDMPNVNTMIVEDADHYGLSQLYQLRGRIGRSSRVAYGYFMYKPDKVLTEVSEKRLQAIKDFTELGSGFKIAMRDLSIRGAGNLLGKQQHGFIDSVGFDLYSQMLSEAVAKK-QGTNAEIDLKLEAYLPDDYINDQRQKIEIYKRIRQMDTEAAFTEIQSDLIDRFGDYPVQVAHLLTIGQLKMNADDALIETIKQVKDKIQVVLSP