>rpoB.pfam00562
VASLIPFVDHNQSPRN-----------------------TYQCA--MGKQAMG------------IYALNKFYRSDQN-TYVLCYPQKPLVKTG-KVEAGG--------------FGELPLGQNAIVAVMSYTG-YNQEDAIIINKSSVDRGFFTSIHIKE--IEA----------RKTK--LGPIEEITRDPPNV-----------SEEAYKKL--DED----GIVRV----GAE------VKPGDILVGKV-----GPTELT-----KLLRAIFGEKAR-DVKDTSLKVKPG--EE-GVVDDVIV---------------------------------------------------------------------------------------------------------------------------------TLNPG-G-----NKMVKVYIRQKRKPEVGDKFASRHGQKGVVSLILPQEDMPFTEDGIPPDIILNPHGVPSRMTIGQLLETHLGKAAAL----------------------------------------------------------------------LG-VFVDATPFDGA-------------------------------------------------------------------------------------------TEV---EDI-------------------------------GELLE---------------------KAG-FNY-------------------------------------------------------------------------------------YGKEVLYDGRTGEPFEAPIFVGPIYYQKLKHMVDDKIHAR-STGPYS--LLTRQPLGGRAR
>gi|167744883|pdb|2PMZ|B
TASIIPYPEHNQSPRN-----------------------TYQSA--MAKQALG------------LYAANYQLRTDTR-AHLLHYPQRPLVQTR-ALDIIG--------------YTNRPAGNNAILAVMSFTG-YNMEDSIIMNRSSVERGMYRSTFFRL--YSTE--------EVKYP--GGQEDK-IVMP--EAGVR----GYKGKEYYRLL--EDN----GVVSP----EVE------VKGGDVLIGKV-----SPPRFL-----QEFKELSPEQA---KRDTSIVTRHG--EM-GIVDLVLI---------------------------------------------------------------------------------------------------------------------------------TETAE-G-----NKLVKVRVRDLRIPTIGDKFASRHGQKGVIGMLIPQVDMPYTVKGVVPDIILNPHALPSRMTLGQIMEGIAGKYAAL----------------------------------------------------------------------SG-NIVDATPFYK--------------------------------------------------------------------------------------------TPI---EQL-------------------------------QNEIL---------------------RYG-YLP-------------------------------------------------------------------------------------DATEVVYDGRTGQKIKSRIYFGVVYYQKLHHMVADKLHAR-ARGPVQ--ILTRQPTEGRAR
>gi|158564152|sp|Q1IHH4.1|RPOB_KORVE
LARRSGIIDSVDSERV-----------------------IVRV----EGEHHPMQLSR--EVGSDIYQLTKFKRSNQN-T---CINQKPIVKQGDHVKKGQVIADG-----PCTDHGELGLGRNVLVSFMPWRG-YNFEDAILVSEKLVKEDYYTSVHIEEFEIEA----------RDTK--LGP-EEITRDIPNV-----------SESALRDL--DES----GVIRI----GAP------VKAGDILVGKVTP--KGETQLTPE--EKLLRAIFGEKAG-DVRDASLTCPPG--IE-GVVVDVKIFSRKGQEKDERAKQIEGTQIAKLEKNLADEIRILTDERLKRLEGLLGAKVVQADLHDERTNKRLLTKDAVLDRETIERISTRNLKRIKYADKDPRVNEQIDEIEEMTSRQIDVLRKIVREKIEKLQKGDELPPG-V-----IKLVKVYIAMKRKLSVGDKMAGRHGNKGVIARILPEEDMPYLEDGTPVEIVLNPLGVPSRMNVGQILETHLGWAGHELGKKIAEFMVENSEAGQVRKHLKQLF-------------------KDTAFVDHVTELDDEMLLKVAKGMQDG-VFFGSAVFDGS-------------------------------------------------------------------------------------------TE----AEI-------------------------------KSLLD---------------------Q-----AGL---------------------------------------------------------------------------------PTSGKTFLYDGMTGDRFEQPVTVGYIYMLKLSHLVDDKIHAR-SIGPYS--LITQQPLGGKAQ
>gi|524091013|emb|CCY69995.1|
VAKRAGVVERSTSKEI-----------------------TLRYD--DNGEK-E------------TYKLLKFQRSNQS-N---CYNQRAIVFKGDHVEAGEVIADG-----ASTSNGEIALGKNPLIGFMTWEG-YNYEDAVLLSERLVQDDVYTSIHIEEYETEA----------RDTK--LGP-EEITNDVPGV-----------GDDARKDL--DER----GIIRI----GAE------VRAGDILVGKVTP--KGETELTPE--ERLLRAIFGEKAR-EVRDTSLKVPHG--ES-GIIVDAKVFKRE--------------------------------------------------------------------------------------------------------------------------NGDELAPG-V-----NESVRIYIAQKRKISVGDKMAGRHGNKGVVSRVLPVEDMPFLPNGRPLDIVLNPLGVPSRMNIGQVLEIHLSLAAKV----------------------------------------------------------------------LG-FNIATPVFDGA-------------------------------------------------------------------------------------------DE----YDI-------------------------------MDTLE---------------------LAN-DYANTEWEDFQAKYKDTLRPEVM---------------------------------------------EYLGEHLDHRDEWRGVPINRDGKVRLRDGRTGEYFDSPVTIGFMHYLKLHHLVDDKIHAR-STGPYS--LVTQQPLGGKAQ
>gi|122397386|sp|Q1GBM5.1|RPOB_LACDA
LAEADGEVEYVDANEI-----------------------RVRR----EDQTL------------DTYTLEKYRRSNAT-K---NYNQTPNVKRGDKVVDGQVIANG-----PSMADGELALGQNPVIAFTTWNM-YNFEDAIMLSERLVKEDVYTSIHIEDYDSEA----------RDTK--LGP-EEITREIPNV-----------GEDALKDL--DEN----GIIRI----GAE------VHDGDILVGKVTP--KGITELSAE--ERLLHAIFGEKAR-EVRDTSLRVPHG--GG-GVVQDVQVFTRE--------------------------------------------------------------------------------------------------------------------------AGDELAPG-V-----NTLVRVYIVQKRKIQVGDKMSGRHGNKGTVALIAPVEDMPYLPDGTPVDICLNPMGVPSRMNIGQLLEIHLGRAARA----------------------------------------------------------------------LG-IHVATPVFDGA-------------------------------------------------------------------------------------------SE----DDV-------------------------------WDFVR---------------------E-----AGV---------------------------------------------------------------------------------DSDGKTVLYDGRTGEPFHNRVSVGVMYYLKLTHMVDDKIHAR-SIGPYS--LVTQQPLGGKAQ
>gi|88909133|sp|Q3Z8V4.1|RPOB_DEHM1
FAKRAGVAASVTSEKI-----------------------IIRTA--EGQDD--------------EYLLKKFVRTNQG-T---CINQHAVINKGQKIEAGQVLADS-----SATENGELALGQNCVVAFMSWQG-FNYEDAIILSERLVREDAFTSIHITKHELEA----------HDTK--LGG-EEITRDIPNV-----------GEESLREL--DED----GIIRI----GAE------VGPDDILVGKITP--KGETELSAE--EKLLRAIFGEKAR-EVKDTSLRMPHG--EW-GKVINVRVFSRE--------------------------------------------------------------------------------------------------------------------------NGDDLPAR-V-----NKWVQVWVAQKRKVSVGDKLAGRHGNKGVISIIAPVEDMPYLPDGTPVDVVLNPIGVPSRMNLGQILETHLGWAGHL----------------------------------------------------------------------LG-FRVATPVFDGA-------------------------------------------------------------------------------------------DD----TAI-------------------------------EDALA---------------------RSW-LSAKAGATDMSPENKRPSTDTAKAVEWIKQQGFDGKKVFDERHPGLAKEVSLKLWLKDMGVDASSLSGAELEKKAYEVSSQSRLPSPIVGKSVLRDGRTGETFDQPVTVGNMYILKLIHLVEDKVHAR-ATGPYS--LISQQPLGGKAQ
>gi|41017761|sp|Q8NT26.1|RPOB_CORGL
ITPVAGVVENVSADFI-----------------------TIMAD--DGKRE--------------TYLLRKFQRTNQG-T---SYNQKPLVNLGERVEAGQVIADG-----PGTFNGEMSLGRNLLVAFMPWEG-HNYEDAIILNQNIVEQDILTSIHIEEHEIDA----------RDTK--LGA-EEITRDIPNV-----------SEEVLKDL--DDR----GIVRI----GAD------VRDGDILVGKVTP--KGETELTPE--ERLLRAIFGEKAR-EVRDTSMKVPHG--ET-GKVIGVRHFSRE--------------------------------------------------------------------------------------------------------------------------DDDDLAPG-V-----NEMIRIYVAQKRKIQDGDKLAGRHGNKGVVGKILPQEDMPFLPDGTPVDIILNTHGVPRRMNIGQVLETHLGWLASAGWSVDPEDPENAE--------------------------------------------LVKTLPADLLEVPAG-SLTATPVFDGA-------------------------------------------------------------------------------------------SN----EEL-------------------------------AGLLA---------------------NSR-PNRDGDV-----------------------------------------------------------------------------MVNADGKATLIDGRSGEPYPYPVSIGYMYMLKLHHLVDEKIHAR-STGPYS--MITQQPLGGKAQ
>gi|41017927|sp|Q7URW6.2|RPOB_RHOBA
RARRAGKVTYADATRIEIG--------------------------------------------SDHYPLKKYQGLNER-T---CQNQKPLITVGDKVEKGQIIADG-----AATQKGELALGRNVLVGFMSFDG-FNYEDAIIISEELVRNDTYTSIHIEDFDVEI----------RETK--LGR-EEFTRDIPNV-----------SEKALRNL--DDT----GIVQT----GTY------VKPGDILVGKVSP--KSKTELTPE--EKLLHAIFGRAGE-DVKNDSLEVPSG--IE-GIVIDTQKFSRRMSLGEDERKAFERELKQHETEGNEEIASTFESLIRDMEEASGVKLKDSTGTPLADG---------QDPKFVAERATSFRLELVLEQIEDEEKRKAAEKVHQTQWQNVEQAIDERDRKLNSMKRGDELRSG-V-----LQMVKIYIATKRTISVGDKMAGRHGNKGVIAKILPIEDMPFLPDGTPIQIMLNPLGVPSRMNVGQILETHLGWAGAK----------------------------------------------------------------------LG-FQALTPIFDGA-------------------------------------------------------------------------------------------SE----SEI-------------------------------NDCLA---------------------E-----AGL---------------------------------------------------------------------------------PAHGKIRLTDGRTGEPMEQETTVGYIYMLKLHHLVDDKVHAR-STGPYS--LITQQPLGGKAR
>gi|109914393|sp|Q2S1Q5.2|RPOB_SALRD
VAEGEGVVEYVDAERL-----------------------VVRY----DEEQDKTDLTF--GEPVQEYELTKFRRTNQG-T---CMNQKPIVQAGDRVEEGEVLTDG-----FAMEKGELALGKNVLCAFMPWHG-YNYEDAIVISERLVADDVYTSVHIEEFEHEV----------RDTK--RGE-EELTREIPNV-----------SEEATKDL--DER----GIVRV----GAE------ITPGDIIVGKITP--KGETDPTPE--EKLLRAIFGDKAG-DVKDASLKAKPG--MEGGVVIDTRLFSRRELDPASKKMEEKRLENIESDHERKLADLNERFWEKFFALVEDATSAGLEDREGEVLLTE----GADFEEDAFDEVDPSDLSTRAEFTEDEELNDQISTLLRNYKSRRRDIEGTTKRQKHQVEMGDELPSG-V-----VQMAKVYVARKKKIEVGDKMAGRHGNKGVIAKIAPVEDMPFLDDGTPVDLVLNPLGVPSRMNLGQIYETLLGWAGDR----------------------------------------------------------------------LG-VKYATPIFDGA-------------------------------------------------------------------------------------------SL----EDV-------------------------------GDELE---------------------K-----AGL---------------------------------------------------------------------------------PRDGKVQLYDGRTGEPFDEKTTVGQIYMMKLEHLVEDKMHAR-SIGPYS--LITQQPLGGKAQ
>gi|511017650|ref|WP_016271994.1|
TAEGDGVVEFVDATTI-----------------------RILYD--RTEEE-EFVSFE---PALKEYNIPKWRRTNQN-M---TIDLRPICEKGQRVTAGQILTEG-----YSTEDGELALGKNLLVAYMPWKG-YNYEDAIVLNERVVREDLLTSVHVEEYSLEV----------RETK--RGM-EELTSDIPNV-----------SEEATKDL--DEN----GIVRV----GAR------IEPGDILIGKITP--KGESDPSPE--EKLLRAIFGDKAG-DVKDASLKASPS--LK-GVVIGKRLFSRVVKTRSSKLADKALLPKIDDEFDAKIGDLKKVLINKLLKLTENYTSEGVKDYMGADIIS-----KGARFSASDFSDLDFTAVQLSNWTKDEHTNGLIRALVMNFIKKYKELDAELKRKKFAITIGDELPAG-I-----IQMAKVYIAKKRKIGVGDKMAGRHGNKGIVSRVVRQEDMPFLADGTPVDIVLNPLGVPSRMNIGQIFEAVLGRAGKN----------------------------------------------------------------------LG-VKFATPIFDGA-------------------------------------------------------------------------------------------SL----DDL-------------------------------NEWTD---------------------KAG-LPR-------------------------------------------------------------------------------------YGKTTLYDGGTGEAFEQQATVGVTYMLKLGHMVEDKMHAR-SIGPYS--LITQQPLGGKAQ
>gi|1710670|sp|P21421.2|RPOB_PLAF7
ISYQEGIVIYVSCIKI-----------------------IIRDL--FNRQI--------------IYYLNNYKKINQN-I---LLIYKPIVWVGEKVNIGQILAIN-----SNLLNSEYSLGNNLLVGYGSYLG-YEYEDAIIISRKILYNNLYTSLHLNIYEISL----------NIIN--NIP-EICSINLSKM-----------YYKNIKHL--DKY----GIIKE----GTY------ILANNILISKLM---FMPFIFNNKSLINIINFLFGSKLR-IFKNKPIISTIH--DI-GRVIKIEILPNHLYN--------------------------------------------------------------------------------------------------------------------------KTEKNNI-----YLKFRIYIGIQKYLQLGDKICNRHGHKGIISYISEINDIPYLNNKIQPDIFISAISIPSRINIGQIFEGIYGLNSLYLNTRYII--------------------------------------------------------SNNLNKNY--YNNYNHIFNYYKY--------------------------------------------------------------------------------------NYNNN----FNI-------------------------------NSKMS---------------------YN------------------------------------------------------------------------------------------YNKYYLKNPFTGNMINNSICLNNIYYYKLIHMIKDKFRYR-FIGLYS--ELTQQPIKGNTK
>gi|1173143|sp|P42487.1|RPB2_ASFB7
AALVSPYANCTQPARV-----------------------TYETN--QGRQTGG------------WYCFSWPYRVDMN-RFFQFYNEMPLVKTI-AHNYVI------------------PNGLNTIVAYMIYGG-YNQEDSVIVSQSFIDRGGFAGTFYRE---------------EKVE--LESDIESFGKPDPLITK-----NLKPGANYEKL---VD----GFVPV----GTV------VKKGDIIIGK------------------VAKIRGEKDELNKYIDRSVMYGFD--EP-AVVDAVMR---------------------------------------------------------------------------------------------------------------------------------PHGPN-D-----EIFGLMRLRYERNLNIGDKMSSRSGNKGIAALALPTSDMPFTEDGLQPDLIVNPHSHPSRMTNGQMIETTVGLANAL----------------------------------------------------------------------QG-VVTDGTAFLP--------------------------------------------------------------------------------------------INV---QLL-------------------------------SERLA---------------------QEG-LRF-------------------------------------------------------------------------------------NGCQKMFNGQTGEYFDAAIFIGPTYHQRLQKFVLDDRYAVASYGPTD--ALTGQPLDGKRS
>gi|123868018|sp|Q197F1.1|RPB2_IIV3
VAGIIPFPDRTQSARN-----------------------CFYSS--MVKQAIG------------FVPC-HNLKTETV-SHTLNYPQKPLVTTS-FAEYNQ--------------LNEYPNGINAIVAIACYTG-YNQEDSIILNKSSIDRGLFGTITYNT--FTA----------QEKK--NGIIEERIEIPSNAIK--------IRDCNYGLV--GPD----GIVRL----RQR------VKKGDVLICKV--------------------TIKNKNQDEKLVDSSVIVQHG--EE-GYVDRIVD----------------------------------------------------------------------------------------------------------------------------------NVID-G-----CRIVKVVIGQMRTPEIGDKFCSGMAQKGTCGMIFPQEDMPFTASGMTPDIIINPNCIPSRMTINQIISTVMGKLYTVN--------------------------------------------------------------------PNP-RFRNGNSFQENS-----------------------------------------------------------------------------------------NTIL---KEL-------------------------------CHHLK---------------------LNG-FDP-------------------------------------------------------------------------------------SGSEVMYSGFTGERIQSTIFMGPTYYHRLKHMVKDKMHAR-SHGQVT--TLHRQPNCGRSQ
>gi|82012001|sp|Q91F97.1|RPB2_IIV6
MAAQIPFAEHTQSPRL-----------------------CYQSS--MAKQAIG------------NIPS-HHVKSDNT-TRVMDYVQRPLVTTQ-IAEMNR--------------FNDFPNGLNAMVAVAIYTG-FNQEDSIILNKASIDRGMFHVVTYKT--IIV----------EERK--IGVNEKICMPVASVR----------RMNNYSLLEDNPESPYFGVVKV----KSF------VKRNDVLVGK------------------VI-TKISKDGTRQETDHSTIVSIS--EE-GKVDRIIR----------------------------------------------------------------------------------------------------------------------------------TSKK-G-----ILMFKIVIAQQKRPEIGDKFCSAMAQKGTVGMILEEVDMPFMEDGSIPDMIINPHCLPSRMTINQIMASIMGKTCCAK---------------------------------------------------------------------NE-TFGDASPFQESSLE-------------------------------------------------------------------------------------KPQDKI---HAL-------------------------------CKELE---------------------ECG-YNY-------------------------------------------------------------------------------------NGTETMMCGWNGKKLRAEIFFGPVYYHRLTHMVSDKIFSR-ASTNQKRHAITRQPLNGRAN
>gi|81954368|sp|Q8QUS6|Q8QUS6_9VIRU
MSAVIPFYNHTQSPRN-----------------------AYQSN--MGKQAVG------------LPCLNYMSRWDVT-LDVLMYPQVPLSRSK-AMDALS--------------FDTMPHGACPIVAVLTFDG-YNQEDSIILNRSSVQRGMFVSTTYKTL-CECE---------KHVK--RCEFERIMRVPVDKR---------RPGLVYDYL--GDD----GIFDPALARGMF------VAAGVVVVGKM---------------------SFDQSRP-EGACCSLAVKPH--EE-GYFDDKLVF---------------------------------------------------------------------------------------------------------------------------------NMAD-G-----CKCVKIKLRKIRIPEMGDKFASFTAQKGTCGMMYDQWDMPFTADGVVPDLVINPHAFPSRMTVHYLLQMCFELGAVA----------------------------------------------------------------------GGGKGYDATAFNS---------------------------------------------------------------------------------------------DG---ADL-------------------------------LKTLE---------------------ELG-----------------------------------------------------------------------------------------YAKQVMYCGRTGRRFESLVFMAPCPYQKLKHLVANKVHAR-TTGPVD--PLTRQPVAGRSR
>gi|81990385|sp|Q7T6X7.2|RPO2_MIMIV
ISSNIPFPDHNQSPRG-----------------------IFQYN--QARQAMG------------LYISDYRERTDISYI--LYHPQIPLVTSR-ASKYTG--------------THIFPAGENSIVAIASYTGLMNQEDSLVINDSAIQKGYMRAQALKK--YMEI--------IKKNP--ASSQTSIFMKPDRNKVD------NLRDANYDKL--SEE----GYAKV----ETV------IRDGDVVIGVV-----NP-------------KPTAREDEKQYKDASSIYKSL--IP-GAVDKVIT---------------------------------------------------------------------------------------------------------------------------------EVNND-G-----YPIIKMRIRSERIPNVGDKFSSRAGQKGTIGYKAHRADMLFSKSGLIPDIIINPNCMPKRMTIGQLIECLLGKLCAV----------------------------------------------------------------------KG-VYGDATPFTS--------------------------------------------------------------------------------------------VDL---NAI-------------------------------NDELV---------------------AAG-YEE-------------------------------------------------------------------------------------WGNETMYNGMNGKKLPVKIFIGPTYYQRLKQMVGDKAHSR-ARGPTQ--LLTRQAPEGRSR
>gi|123853599|sp|Q4A245|Q4A245_9PHYC
CVSQIPFCDHNQSPRI-----------------------AYQAA--QCKQAIG------------LYTTNFAERLDTV-GHVLATPQKPLVTTR-LEELLG--------------TSVVRSGAVPIVAIMCYSG-FNQDDSVLLNQSSIDRGLFTSFAYHT--IRD----------EEKG--TGADIERFENPKNIPGC-----SGMKEADYSKI--DDK----GMPII----GKT------FYNGDVLIGKV-----VSMSLL------QADPKEGEVRRDTKRDRSHVLRTD--EP-VVVDAVFL---------------------------------------------------------------------------------------------------------------------------------SKTPE-G-----HGYVKVRTRAIRIPMVGDKFSARHGQKGVCGVTMPAADFPCTADGVAPDIIINPHAIPSRMTIGMLMEMVLSKVACY----------------------------------------------------------------------EG-ETQDGTPFTG--------------------------------------------------------------------------------------------NNI---ELI-------------------------------ADRLE---------------------THG-MQR-------------------------------------------------------------------------------------YGNEMLYNGMSGEMLESMIFIAPCYYQRLKHMVVDKSHAR-NRGAQQ--LLTRAPTEGRSR
>gi|121906462|gb|EAY11371.1|
CGTIIPFPDHNQSPRN-----------------------TYQCA--MGKQAIG------------LYTTNYMIRMDSS-SHVLWYPQKPLVATR-NMRYLN--------------FNKLPAGINVTVAICCYTG-YNQEDSLMLNASAIDRGLFRSYFFRT--YKETA-------EGDGT--EGASEV-FTFP--DPQTV----KGIKLHDSSKI--DAD----GLAIP----GAV------VSAQDVIIGKI-----SPDSP------TELDHRQ-------YKDTSCVVRPM--ET-GVVDLVLR---------------------------------------------------------------------------------------------------------------------------------TITKK-N-----LQLARVRTRQMRRPEIGDKFCSRHGQKGVCGMTYRQEDMPFTRDGMVPDIIMNPHALPSRMTIGHLIECLLGKCTAIDP-------------------------------------------------------------------QNA-DEGDATPFCG--------------------------------------------------------------------------------------------VTV---DAI-------------------------------AKRLQ---------------------DAG-FEK-------------------------------------------------------------------------------------YGNETLYNGRSGKRLKAKIYFGPTYYQRLKHMVGDKAHAR-ALGRKS--LILRQPVDGRAR
>gi|124447565|sp|A0CUT2|A0CUT2_PARTE
CASVIPFANHNQGPRN-----------------------TLQSA--MGKQAMG------------LNSTNFNIRFDTL-VHILHYPQKPLASSR-AVDFIT--------------VNEVPIGINCVTSIACFTG-YNQEDSIIINQYAIDRGFFRSVFYRT--YKES--------EDKDP--DNFTETKITKPIGDN---------FAGKLFIKL--DSD----GIVPP----GTK------VDEEEPIIGKEL--------------IIDNIMLNTANGQKNTKECSLLTRRA--ER-GVVDSVLI---------------------------------------------------------------------------------------------------------------------------------SENQK-G-----YKLVKVKVRSLRIPQIGDKFCSRHGQKGTCGMTYRQEDLPYTLVGISPDLTINPHCIPSRMTIGHLIECLSSKLASI----------------------------------------------------------------------KG-QFNDATPFAQ--------------------------------------------------------------------------------------------ILV---NDI-------------------------------ANELH---------------------KVG-WQK-------------------------------------------------------------------------------------WGNEVMTNPYTGNMFSIPIFVGPTYYQRLRHLVDDKMYAR-SRGPVT--GITRQPTHGRSR
>gi|74898253|sp|Q583H5|Q583H5_9TRYP
CASIIPYPNHNQSPRN-----------------------TYQSA--MGKQAMG------------IYASNFNMRMDTT-AHVLFYPQKPLVRTK-AMSYMR--------------SNDLPAGHNAIVAIACYSG-YNQEDSIIMSRSAVERGFFRSVFWRS--YKAS--------EEKKR--EGR-EM-FEIP--DRKV-----CHVKRADYTKL--DTD----GLIKP----GMP------VIGGDIIVGKT-----IPVPKTL---SEE---SPVSDTRILKRDCSISSRAA--EK-GVVDRVML---------------------------------------------------------------------------------------------------------------------------------TENK--G-----NRFTKVRIRTIKIPNIGDKFCSRHGQKGTNGIQFRQEDMPFNHDGISPDLIINPHAIPSRMTVAHLIETLAGKVACY----------------------------------------------------------------------KG-GEVYATPFCS--------------------------------------------------------------------------------------------VVV---EDF-------------------------------GKALT---------------------QLK-LNR-------------------------------------------------------------------------------------YGNERLYNGHTGLPLDHLIFFGPTYYQRLKHLSSDKIHAR-PRGPLQ--PLVRQPTEGRAH
>gi|159116724|ref|XP_001708583.1|
ITSLIPFPDHNQSPRN-----------------------LYQAS--MGKQAVG------------IYALNYLKRFDTSGINVMHYPQLPLVTTR-SMPHVK--------------FRYLPAGQNVIIAIAVYSG-FNQEDSLIMSQSAVDRGFMRATYYHT--YEEMISS---AASSINA--PDRIEK-FCRPI-GPNIK----GIKDPGCASYL--EAD----GLPRV----GNA------VNSQRLIIGKI-----RPNKR-------SMNSRAVSTYD--FQDVSLKVKME--ET-GRVDSVIIAPDLREQSF----------------------------------------------------------------------------------------------------------------LSEGVDSNTTGAE-G-----SLLAKVRVRSSRVPQLGDKFSSRHGQKGTVGMLLRHEDLPFTLDGITPDIIMNPHAIPSRMTIGQLMESVASKLGAL----------------------------------------------------------------------SG-HEVDGTAFNAP------------------------------------------------------------------------------------------PGST--DKQI-------------------------------AADLH---------------------ARG-YQK-------------------------------------------------------------------------------------HNYEAMMNGMTGEMMTYRIFIGPTFYQRLKHMVLDKISSR-NTGPIV--TLTRQPNEGRSN
>gi|159117422|ref|XP_001708931.1|
LGLLVPFSDHNQSPRN-----------------------MYECQ--MLKQTMG------------IPCRNLAYKYDTK-SYLLTTPQKPLVRNAIIHDIGG--------------FDTHPTGTNLVVAVSAYTS-YDMEDAALINKASLERGLFHGTVYSV--HDIDCYDDKLMRYMRTV--ATAVPYLKRSPDYIVT-------HMDENYDTEL--DED----GLPPV----GAY------LSHGSVFY---------------------------QTYDPTKQCYSTKLYHH--EP-GFVEKVIVIHKSAAKGEYWTDNDIATKKKRDSSFPAGDSNSSNLDNDASDD-------------------------------------------EISNQPGSGSESNEDNQTATPRSHASKAERKSSRQLQTRARTESSSLH-F-----IQRVRIVIRHDRTPVVGDKVASRHGQKGIMGIRWRQTDMPFTSSGIVPDLIINPHAFPSRMTVGMLIESLASKIGVH----------------------------------------------------------------------YA-DFVDSSPFQWSD----------------------------------------------------------------------------------------ERRAI---DVF-------------------------------GEQLL---------------------KTGQFNR-------------------------------------------------------------------------------------YGSEVMYSAITGDPMPADIFIGVVYYQRLRHMVSDKYQVR-AEGPSD--KITKQPIKGRKR
>gi|74777386|sp|Q5CSG7|Q5CSG7_CRYPV
TASLIPYAHHNQSPRN-----------------------MYQCQ--MLKQTMG------------TPCLNHPYRTDNK-MYRLLTPQEPTIITK-GYSSFG--------------FSEYPTGTNAIVAVMSYSG-YDMEDAMILNKSSYDRGMFHACVYKT--KIISAA----PPSATKK--SDAESYFFHNIGPD-----------GELVVKEL--SAD----GLPNI----GQR------LTKGSPICRV----------------------ERIGSGGGPSNATIQTYHDD--EV-AFVEKINRIASGISIELQQ-----------------------------------------------------------------------------------------------------------DSLSGGGGDGASSSSG-Y-----GEKVSIKLRIVRNPMVGDKFASRHGQKGILSMLWPQENMPFSESGMVPDILFNPHGFPSRMTIGMLLESMGGKAACI----------------------------------------------------------------------HGARSLDATPFNINISDDLSRSEE-----------------------------------------------------------------------NCEDDKAGEKTTV---DYF-------------------------------GKALE---------------------RAG-FQY-------------------------------------------------------------------------------------YGCEPLYNGMTGVELPCHIFMGVIYYQRLRHMVADKAQVR-ATGPID--ALTRQPVKGRKR
>gi|122051722|sp|Q4N2L4|Q4N2L4_THEPA
SASLTPFSNHNQSPRN-----------------------MYQCQ--MLKQSVG------------IPFHSQFYRSEVK-TYVLTSLQRPLVATK-EYEKMG--------------FQDYPTGVNCVVAIIAHSG-FDMEDAMILNKASVDRGLFNSFIYKS--KVIDLNS---QASSTKE--RGGTVEYFNNMDKD-----------SKLIVKKL--DFD----GLPRL----GEK------LTKNSPFYRI-----------------------EERGKNNIVNDKVVKYTE---EP-AIVDQITLVGKSEI---------------------------------------------------------------------------------------------------------------------TVGDKISCPGL-K-----HDRAIIKLRVLRSPIVGDKFASRHGQKGILSAVWPTEDMPFLENGIVPDVIFNPHGLPSRMTIGKLIEGMAGKVASI----------------------------------------------------------------------YG-KPQDSTCFQAYYSENPEN----------------------------------------------------------------------------GDEEMEEVDVV---DYF-------------------------------GKSLI---------------------KSG-YEY-------------------------------------------------------------------------------------YGTESMYCGTLGTEIQTHIFVGLIYYQRLRHMVSDKAQVR-STGPVD--TITKQPVKGRKN
>gi|74863191|sp|Q8II17|Q8II17_PLAF7
LASLTPFSDHNQSPRN-----------------------IYQCQ--MLKQTMG------------IQSLNNVYTFTNK-IYRMITPQFPLVVTR-DYEFYG--------------VDNFPSGTNAVVAILAYTG-YDMEDALIINKASADRGIFRTHIYKT--EFIDLQK---VGESSNFVFGNNIRYLNNNKNNNKN-------LAYENKGKFL--NKD----GLPCV----QQK------ITEGSPLYSY------------------------INKGNELTTYESFRNHGE-----YFVDFVSI----------------------------------------------------------------------------------------------------------------------------------GKNN-S-----NQVAVVKLRSTRQPQVGDKFASRHGQKGVVSRLFPQEDMPFAESGIVPDIIFNPHGIPSRMTIGMLIESICGKAASL----------------------------------------------------------------------YG-KRIDATPFRKYTQQKSFNNPWIDNCGIKGFLEKNDTIKSDLDTCQKEKDKNKNINNNNNNKIKENKYNNSNDSNASIDSDDNTNNCNDKRDEEEKKANITYDEKI---DYF-------------------------------AKLLL---------------------NKG-YDY-------------------------------------------------------------------------------------YGTELLYSGIYGVPLQAHIFIGVIYYQRLRHMAYDKAQVR-RTGPVC--NLTHQPLKGKRK
>gi|1411102246|ref|XP_025210257.1|
IANFIPFSDHNQSPRN-----------------------MYQCQ--MGKQTMG------------FPLLTYQDRSDNK-LYRLQTPQSPLVRPS-MYDYYD--------------MDNYPIGTNAIVAVISYTG-YDMEDAMIVNKASWERGFAHGSVYKSEFIDLS---------EKIK--QGD-SSLVFGIKPG-----------DPRILQKL--DDD----GLPFI----GAK------LQYGDPYYSYL-------------------------NLN-TGESFVMYYKSK--EN-CVVDNIKVCS------------------------------------------------------------------------------------------------------------------------------NDTGSG-K-----FKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAAL----------------------------------------------------------------------HG-LCHDATPFIFSEE-------------------------------------------------------------------------------------------NSALEYF-------------------------------GEMLK---------------------AAG-YNF-------------------------------------------------------------------------------------YGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVR-TTGARD--RVTNQPIGGRNV
>gi|74967326|sp|Q27493|Q27493_CAEEL
AGNLIPFPDHNQSPRN-----------------------VYQCQ--MGKQTMG------------TAVHAWHSRADNK-MYRLQFPQQPMLKLE-AYEKYE--------------MDEYPLGTNACVAVISYTG-YDMEDAMTINKASYQRGFAHGTVIKV--ERINL-------VTERE--RKTIFYRN-----------------PREEIKTV--GPD----GLPIP----GRR------YFLDEVYYVT----------------------FNMETG----DFRTHKFHYA--EP-AYCGLVRIVE------------------------------------------------------------------------------------------------------------------------------QGEGDS-G-----AKHALIQWRIERNPIIGDKFASRHGQKGINSFLWPVESLPFSETGMVPDIIFNPHGFPSRMTIGMMIESMAGKAAAT----------------------------------------------------------------------HG-ENYDASPFVFNE----------------------------------------------------------------------------------------DNTAI---NHF-------------------------------GELLT---------------------KAG-YNY-------------------------------------------------------------------------------------YGNETFYSGVDGRQMEMQIFFGIVYYQRLRHMIADKFQVR-ATGPID--PITHQPVKGRKK
>gi|74896752|sp|Q54BM1.1|RPA2_DICDI
LANLTPFSDYNQSPRN-----------------------MYQCQ--MAKQTMG------------TPLHSYPFRTDNK-LYKVQNVQKPIVHTK-NQFKFR--------------CNDYPHGCNAVIAVISNTG-YDMEDAMIINKSAYERGFGHGSVYKN--EYIDLDQGLSRFEQKKTF--------FGRPNTV-----------VDELDKFI--DTD----GLPFV----GRL------IKPGEPYYTY----------------------IRPSDG----RQVTKDYKGK--EE-AYIEDVRIIFGP--------------------------------------------------------------------------------------------------------------------------NGATRDPS-K-----INNICVKLRFNRNPVIGDKFSSRHGQKGVLSQLWPEINMPFTESGMKPDVIINPNAFPSRMTIGMLVEILAGKAGAI----------------------------------------------------------------------HG-KFQDATAFQFDE----------------------------------------------------------------------------------------NNTAI---DFF-------------------------------GEQLA---------------------KAG-FNR-------------------------------------------------------------------------------------FGNEQMYSGTTGKEFECEIFFGVCYYQRLRHMVKDKYQVR-ALGKVN--ALTRQPIKGRKV
>gi|1078733159|gb|AOW30435.1|
LANLTPFSDFNQSPRN-----------------------MYQCQ--MGKQTMG------------TPGTALVHRSDNK-LYRLQTGQTPIVKAN-LYDDYG--------------MDNFPNGMNAIVAVISYTG-YDMDDAMIINKSADERGFGYGTVYKT--EKVDL------SQSRRR--GDPITQHFGFGSDEW----------PEAWKEKL--DAD----GLPLI----GVK------VEEGDPIVAY----------------------YDDTLG----KTKVKTYHSS--EP-AYIEEVKLLG------------------------------------------------------------------------------------------------------------------------------DDSNEQ-E-----GQQITIKYRITRQPLIGDKFSSRHGQKGVCSRKWPQIDMPFTESGMQPDVIINPHAFPSRMTIGMFVESLAGKAGAL----------------------------------------------------------------------HG-IAQDSTPWKFNE----------------------------------------------------------------------------------------QDTPA---DYF-------------------------------GEQLL---------------------KAG-YNY-------------------------------------------------------------------------------------HGNEPMYSGATGEELRCDIYIGCVYYQRLRHMVNDKFQVR-STGPVN--SLTMQPVKGRKR
>gi|74951263|sp|Q4UB41|Q4UB41_THEAN
VAGLIPFPNHNQSPRN-----------------------TYQCA--MGKQSIG------------SIGYNQLQRCDTV-VHLMNYTQQPLVTTK-TIQLVN--------------FDKLPAGQNAIVAVMSYQG-YEIEDAIILNKASIDRGFARCYTLRR--LTC----------EITP--GNATSINGYNPNKS----------------QNK--DSDSTNEYVIGV----GEP------VKPGQVLISTK-----APPTDFTTNGSMNGKNGESNQSSGTNEDKYIVNKYDLNTG-GYIDRLIL---------------------------------------------------------------------------------------------------------------------------------TENFN-G-----NTMYKIMVRQSRPPEIGDKFSSRHGQKGVVGLIAEHEDMPFTESGIVPDLIMNPHGFPSRMTVGKLLELVASKSSVF----------------------------------------------------------------------SG-NFVDSTPFSNSYSDNL--------------------------------------------------------------------------------CNDLNNTKTDNMSDI-------------------------------CNILI---------------------KNG-FHP-------------------------------------------------------------------------------------KGKEILYSGISGNPINTLIFIGPIYYQRLKHMVTDKIHAR-GRGPRQ--PITRQPTEGRSR
>gi|124448644|sp|A0D7M6|A0D7M6_PARTE
VTGLVPFPHHNQSARN-----------------------TFQCQ--MGKQSLG------------IIGMNTQIRCDTQ-LYQLIYPQTPLVRTV-SMEAVN--------------QHRLPAGHNAQVAVMSYSC-YDIEDALIMNKSSLDRGFGRTAVYKK--SVTECE-----INQRNK--ESRFNERIDEPPTKTHNT----KKKFIKKYHAL--DND----GITKV----GAQ------LHHGDIYVNKK-----TP-----------QVPDNPQTENIQIADTPSVFKEK--WP-YTVDRVLI---------------------------------------------------------------------------------------------------------------------------------INNTNDGTE--KIKTIKTIFRQIRRPEFGDKFSSRHGQKGVVGLIVNQEDMPFNERGWCPDLIMNPHGYPSRMTIAKLMELLCGKLGAL----------------------------------------------------------------------EG-KFKYGTAFGG--------------------------------------------------------------------------------------------ENV---LQV-------------------------------GEELL---------------------KRG-FHY-------------------------------------------------------------------------------------QGKDCLISGITGEYMECYVYQGPIFYQRLKHMVIDKIHAR-AKGPME--KLTRQPVEGRAK
>gi|121974252|sp|Q236N3|Q236N3_TETTH
VSGLVPYPHHNQASRN-----------------------TFQCA--MGKQALG------------IIGSTSMNRVDTI-LYQLIYPQTPLLKTK-VIEYAG--------------YDKFPAGHNASIAVLSYSG-YDIEDATVLNKSSLDRGFGRTMVFKK--YETE--------IQKLK--MSGLTELLRGPPKEAEGSYKKKQNRVLKKFGAL--DDD----GTPIV----GAS------INNGDVLFNKY-----TPLLTLE---QQRGRDILNNNSVSEYIHNPTTFKGK--KL-ARIDRVIR---------------------------------------------------------------------------------------------------------------------------------SQQDG-------NVIIKTIVRETRRPEYGDKFSSRHGQKGIIGLIVNQEDMPFSEKGWVPDLIMNPHGYPSRMTVGKLLELLGSKAAVL----------------------------------------------------------------------SG-QFKYGTAFGG--------------------------------------------------------------------------------------------DKM---ADL-------------------------------SSILV---------------------QNG-FSY-------------------------------------------------------------------------------------TGKDVIISGITGEYMQCYVFCGPVFYQRLKHMVADKVHAR-AKGRVT--TLTRQPTEGRAK
>gi|159119582|ref|XP_001710009.1|
VVGLIPYPHHNQSPRN-----------------------CYQCS--MGKQASG------------AIAFNQLERFETA-MFLLDYPQQPLTSTK-ILKLTG--------------YERLPAGQNATVCVMSYSS-FDIEDALILNRNAIDRGFGRCSIYRS--VSTELN-----SIGSKS--VDGIKDILLGPPKDHL--------KQYEGYHAI--EDD----GLCAV----GAH------LKTGDIVINKGRHITNIP------------GLSDGTEATASLIKAPESLKSPLETI-TYVDKVLV---------------------------------------------------------------------------------------------------------------------------------TTNGD-G-----NMLIKVLTREPRRPEVGDKFSSRHGQKGVCGLIVPQSDLPFTSQGIVPDLIMNPHGYPSRMTVAKLLELLSNKSGCF----------------------------------------------------------------------RG-EQTDGTCFRTKT-----------------------------------------------------------------------------------------DETF--LAEL-------------------------------YDSLR---------------------VAG-FSY-------------------------------------------------------------------------------------SGKDVLYSGLTGDVIPVYIFNGPIYYQKLKHMVKDKIHSR-GTGPIT--MLTRQPTEGRRV
>gi|51704303|sp|P59470.2|RPC2_MOUSE
CAGLIPYPHHNQSPRN-----------------------TYQCA--MGKQAMG------------TIGYNQRNRIDTL-MYLLAYPQKPMVKTK-TIELID--------------FEKLPAGQNATVAVMSYSG-YDIEDALVLNKASLDRGFGRCLVYKNAKC----------TLKRYT--NQTFDKVMGPMLDAAT-------RKPIWRHEIL--DAD----GICSP----GEK------VENKQVLVNKS-----MPTVTQ------IPLEGSNVPQQPQYKDVPITYKGA--TD-SYIEKVMI---------------------------------------------------------------------------------------------------------------------------------SSNAE-D-----AFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVL----------------------------------------------------------------------DG-RFHYGTAFGG--------------------------------------------------------------------------------------------SKV---KDV-------------------------------CEDLV---------------------RHG-YNY-------------------------------------------------------------------------------------LGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHAR-ARGPRA--VLTRQPTEGRSR
>gi|74899670|sp|Q5CPZ8|Q5CPZ8_CRYPV
VSGLIPYPNHNQSPRN-----------------------TYQCA--MGKQVMG------------SVGFNQFLRCDSV-LYLLVYPQKPLCKTR-TIEMIN--------------FEQLPAGQNSSVAVMSFAG-YDIEDAIVMNKASVDRGFARCFVMKR--QTIE--------LQKLP--NGLSERVVRPISVGSGNTG--NRRFSFKNDSIL--DND----GVCNV----GVQ------VSEDDIIVNKM-----SPINTR------EYVGDPSQFDLSEYKPSPVKYKGP--TS-SYIDRVIL---------------------------------------------------------------------------------------------------------------------------------TENAD-G-----NQIYKVITRQTRRPELGDKFSSRHGQKGVVGLIISQEDLPFSETGWCPDLIMNPHGFPSRMTVGKLLELISSKASVL----------------------------------------------------------------------DG-NYRYGTAFGG--------------------------------------------------------------------------------------------TPL---EES-------------------------------AKCLV---------------------EHG-FHY-------------------------------------------------------------------------------------SGKEYLTSGTTGEAIEAYIFVGPIYYQKLKHMVLDKMHAR-GRGPRQ--ILTRQPTEGRSK
>gi|939204604|sp|F4KD38.1|NRPC2_ARATH
VAGLIPYPHHNQSPRN-----------------------TYQCA--MGKQAMG------------NIAYNQLNRMDTL-LYLLVYPQRPLLTTR-TIELVG--------------YDKLGAGQNATVAVMSFSG-YDIEDAIVMNKSSLDRGFGRCIVMKK--IVAM--------SQKYD--NCTADRIL--IPQRTG--------PDAEKMQIL--DDD----GLATP----GEI------IRPNDIYINKQV----PVDTVT------KFTSALSDSQY-RPAREYFKGPEG--ET-QVVDRVAL---------------------------------------------------------------------------------------------------------------------------------CSDKK-G-----QLCIKYIIRHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVS----------------------------------------------------------------------CG-RFHYGSAFGERSG---------------------------------------------------------------------------------------HADKV---ETI-------------------------------SATLV---------------------EKG-FSY-------------------------------------------------------------------------------------SGKDLLYSGISGEPVEAYIFMGPIYYQKLKHMVLDKMHAR-GSGPRV--MMTRQPTEGKSK
>gi|123487429|ref|XP_001324946.1|
CAGVVPCPHHNQSPRN-----------------------TYQCA--MGKQAIG------------PTALNIMHRVDKS-TYFNCYPQQPMVQTR-TIRLSR--------------YHEMPCGQNAMVAIMSYSG-HDIEDALLMNKASLDRGFGRRYYLSK--LDLM--------LKNYQ--GGVIGDRIAPLDRERPE------NIASPQYSLL--DAD----GIIRP----GER------IEKGMIYANKY-------------------VPLNFEESPVKFMAQPARYNY---YP-VMIQNVSV---------------------------------------------------------------------------------------------------------------------------------YTTET-------TQVIKIKTADFRRPELGDKFSSRHGQKGVIGLIVPQEDMPYTEDGICPDMIMNPHGFPSRMTVGKMIELVSGKVGIL----------------------------------------------------------------------TG-RIGNGTAFSS--------------------------------------------------------------------------------------------DRV---KDI-------------------------------ADDLI---------------------AAG-YSY-------------------------------------------------------------------------------------SGKDMLMSGITGEPLYAYIFFGPVFYQSLKHMVKDKMQAR-ATGQVQ--YLTRQPTQGRSR
>gi|122049489|sp|Q4GZE8|Q4GZE8_9TRYP
VAGIIPFPHHNQSARN-----------------------TFQSA--MGKQALG------------TIAYNQYIRMDTV-LMLGAYPQRPLCRTK-AMNLTN--------------YEILGAGINAMVCVMSYSG-YDIEDAQVYNRSSLDRGYGRCVVLRK--HEVE--------LERLP--NGEYDIILPADSNV-------------GRHSAL--NSD----GIASK----GAV------VRQFDILVNKY-----TP------------------VPSMEPRPNPLVYKYP--QP-AVVDHVVI---------------------------------------------------------------------------------------------------------------------------------SPPGDSDRSMDVEQKIKVVTREVRGPEPGDKFSSRHGQKGVVGLITDGVNMPFNEQGICPDMIMNPHGFPSRMTVGKLLELVSSKVSAL----------------------------------------------------------------------TG-KFGDGTAFGG--------------------------------------------------------------------------------------------DKA---EDL-------------------------------GEELI---------------------RHG-YNY-------------------------------------------------------------------------------------HGKDIFYSGVTGEMLRAYVFFGPIYYQRLKHMVTDKMHAR-ATGPRS--MLTRQPTEGRSR
>gi|6226042|sp|O67762.1|RPOB_AQUAE
VAKRGGVVEEVDSSKI-----------------------IIRV----NPEEINFDDPL--DIGIDIYELRKFQRTNQK-T---CVNQRPIVRKGEKVEKGQIIADG-----HSTDRGELALGKDVLVAFMPWRG-YNFEDAIVISERLVKEDVYTSIHIEELEVEA----------RETK--VGE-EEITRQIPGV-----------PERALAHL--DEH----GIVRV----GTY------VKPGDILVGKVTP--KGETRLTPE--EKLLQAIFGEKTR-DVKDASLRCPPG--VE-GIVIDVQVFTRKGTGKKDMLAEKVEREELEALEQELEKKKNLIITGRDKVLKGLVLGRKVEKDAKVGRKTVK--KGTVIDEKVFEEFVNYILGRPENFFEDEDLIRKIREIAERTRTQIEMLNKVYEEKKETLLKRRDLPPG-V-----ITLVKVFIANKRKIKVGDKMAGRHGNKGVISVVLPVEDMPFLPDGTPVDIVLNPLGVPSRMNVGQILETHLGWAAKELGKKIGEMIEKGRDRKAITEYLKEIFAIGD----------KDGENAKFIEEFLNSLSEEEFWSVVRDYAERG-IPMATPAFEGA-------------------------------------------------------------------------------------------EE----DAI-------------------------------KELLK---------------------K-----AGL---------------------------------------------------------------------------------PENGKTTLYDGRTGEPFDFEVTVGYMHMLKLIHMVDDKIHAR-ATGPYS--LVTQQPLGGRAQ
>gi|74579816|sp|Q74MN2|Q74MN2_NANEQ
LSAAVPYARFNQSARL-----------------------NRGER--TQRQALG------------LYSVAYPLRFESD-VHVAQTLQKPLVRTI-VHDLIR--------------FDERPAGYNMVVAVMAYEG-YNTQDALVINRNAIDFGFTRTMYFRP--YEAV--------ERKYA--LGLSDE-ITVP--SPDVR----GYKGEKHYRHL--ESD----GIVYP----EAE------VKGKDVLIGRI-----SPPRFLE---GGELALLGAATLQ--KRDSSITVRSE--EE-GIVDSVLV---------------------------------------------------------------------------------------------------------------------------------TEGED-S-----NLKVRVRIRMERPTEIGDKFSSRHGQKGVIGLIVPPSDMPFTASGIVPDLIFNPHGLPSRMTIGQIIELVAGKVASL----------------------------------------------------------------------RG-KAVDGTPWEE--------------------------------------------------------------------------------------------EPV---EDL-------------------------------RKQLL---------------------RLG-FRE-------------------------------------------------------------------------------------DGTETMYDPITGEEYKVKIFVGVMWYHKLKFLAANKLHAR-ARGPMA--ILTRQPTEGKSR
>gi|118195269|gb|ABK78187.1|
GASIIPYPEHNQSPRN-----------------------TYESA--MAKQSLG------------FSTPMMNTSTYVR-QHFMLYPQTPIVNTR-AMGLLG--------------LEDRPAGQNCVVAVLPFDG-YNIEDAIVLSKSSVDRGLARTFFYRI--YDAE--------AKQYP--GGMRDN-FEIPGAEDNIR----GYKGEKSYRLL--EDD----GVIAS----EST------VLGGDILIGKT-----SPPRFM-----EEYKEFEPSGPY--RRDTSIGVRPS--ET-GVVDTVVM---------------------------------------------------------------------------------------------------------------------------------TQSNE-G-----GKMYKIRVRDMRVPEIGDKFAARHGQKGVLGILAKNEDLPYTAEGVTPDVLINPHAFPSRMTVGMFMESITGKAAAL----------------------------------------------------------------------RG-TQFDGSAFVG--------------------------------------------------------------------------------------------EKM---EEV-------------------------------REVMD---------------------TAG-FKY-------------------------------------------------------------------------------------SGKEIMYDGRTGKAFPVEVFIGVVYYQKLHHMVADKIHAR-ARGQVQ--MLTKQPTEGRAR
>gi|124363523|gb|ABN07331.1|
GAAHVPFPEHNASPRV-----------------------TMGAG--MIKQALG------------FAQANMKLRPDTR-GHMLHYAQVPMVHTQ-AAELIG--------------SDNRPQGQNFCVAIISYEG-YNIEDALIFNKASVERGVGRSHFFRT--YEGE--------ERRYP--GGQVDR-IELP--EEDVQ----GSHGIGSYANL--DVD----GIINP----ETV------VNEKDVLIGKT-----SPPRFL-----EEPTGELIAVEK--RRDTSITMRSN--ET-GIVDTVII---------------------------------------------------------------------------------------------------------------------------------TESEN-S-----SRLVKVRTRDLRIPEIGDKFASRHGQKGVCGLITPQENMPFTAAGIAPDLVINPHAVPSRMTIGHMLEMIGGKAGAL----------------------------------------------------------------------EG-SRVNATSFRK--------------------------------------------------------------------------------------------TQV---EKIFDSSFAQNRLLNDKEIGKDVKSSTLTREQVLRHQLA---------------------EAG-FAH-------------------------------------------------------------------------------------TGREVMYDGITGRRFQADIYIGVIYYQKLYHMVSTKMHAR-SRGPVQ--VLTRQPTEGRAR
>gi|74560505|sp|Q8TXI7|Q8TXI7_METKA
CCSCIPWPESNSAPRN-----------------------TMGTN--MTRQALG------------FYAANHPIRMESR-GHLLYYPHRPLVKTR-GTEAFD--------------YDERPAGQNMIVAVLTYEG-YNMEDAIIMNESAIERGLARSFFFKT--FEDE--------ARTYP--GGMKDK-FCIP--EKEVR----GYRSEDAYKHL--GED----GLAEV----GER------VEGRDVIIGKT-----SPPRFL-----EEFRPEELPAEE--RRESSTAIRHT--DS-GIVDSVII---------------------------------------------------------------------------------------------------------------------------------TETSD-G-----HKLVKVRIRDERVPELGDKFSSRHGQKGVIGMIVPEEDMPFTEDGITPDLILNPHALPSRETMAHILETLAGKAAAL----------------------------------------------------------------------SG-KRIDGSAFTSN------------------------------------------------------------------------------------------PKEA--YEEI-------------------------------KKMLR---------------------ELG-FEP-------------------------------------------------------------------------------------TGKEVMYDGRTGQKLEAEVFIGVCLYRKLYHMVKDKYHAR-SRGPVQ--VLTRQPTEGRAR
>gi|74572761|sp|Q8ZYQ9|Q8ZYQ9_PYRAE
IASIIPYIEHNQSPRN-----------------------QYEAA--MAKQSLG------------LPQSNFLYKLDSR-GHMLYYPERPIVTTR-GLELIG--------------YSKRPAGQNAVVALLTYTG-YNIEDAVILNKASVERGMFRSVFYRTYETEE----------QKYP--GGE-EDRIEIPDSSVKG------YRGPEAYSHL--DED----GIAPP----EVY------VSSNEVLIGKTS-----PPRFY-----TTLEAERILKER---RDASVAVRRG--EK-GIVDKVII---------------------------------------------------------------------------------------------------------------------------------TESPE-G-----NKLVKVRLRELRVPELGDKFASRHGQKGVVGMLLRQEDMPFTEDGIVPDIIVNPHALPSRMTVAQLLESIAGKLGAS----------------------------------------------------------------------TG-QLIDATPFEGV-------------------------------------------------------------------------------------------KE----EDL-------------------------------RKLLL---------------------KLG-YKW-------------------------------------------------------------------------------------DGKEVMYSGITGERLVADIFIGIVYYQKLHHMVADKIHAR-ARGPVQ--ILTRQPTEGRSR
>gi|242041665|ref|XP_002468227.1|
SCGIIPFANHNFARRV-----------------------LYQSEK-HSQQAIG------------YSTTNPHIRVDTL-SHQLYYPQRPLFKTV-IADCLGRSDYTTFGRKDDFMRPEYFNGQNAIVAVNVHQG-FNQEDSLVMNRASLERGMFRTEHLRS--YKADVE----NKDG-TKR-LKLKEKIDFGKTES-----------KRGRVDNL--DDD----GLPYI----GAS------LQTNDIVIGKV-----------------------SES----GEDHSIKLKHT--EK-GMVQKVLL---------------------------------------------------------------------------------------------------------------------------------SANDE-G-----KNFAVVTLRQVRTPCLGDKFSSMHGQKGVVGFLESQENFPFTHKGIVPDIVINPHAFPTRQTPGQLLEAALGKGIAC----------------------------------------------------------------------KG-TMRYATPFTTA-------------------------------------------------------------------------------------------SV----DVI-------------------------------AEQLH---------------------RAG-YSR-------------------------------------------------------------------------------------WGTENVLNGRTGERMQSLIFMGPTFYQRLIHMSEDKVKFR-NTGPVH--PLTRQPVADRKR
>gi|122235247|sp|Q0P3M6.1|RPOB_OSTTA
VAKQNSYISYVDAQRIDYFTPVIGDTNLIDYQNLTAEDVFASNQFK-----------------HNTIWLTSYQRSNQD-T---CLNHKPLVEANTWVEAGDCLADN-----AATAKGELALGRNILIGYMPWEG-YNFEDAVLVSERLVYDDVFTSIHISRYEVST----------ARLR--EGQ-EYFTNQVDRN----------------QYL--DEF----GVVKI----GTW------VEAGDVLVGKISP--QPDSDNDPE--SRLLRAIFGGVAR-NTKTTSYCLSSG--VS-GRILDVRCEFKRQTKN-----------------------------------------------------------------------------------------------------------------------------IEDESIESTGSVYVYLVEKRRLQVGDKVAGRHGNKGIVSNILPRVDMPYLQSGKALDMVLNPLGVPSRMNVGQIFECLLGLAANT----------------------------------------------------------------------LK-QNFKVLPFDEMHG--------------------------------------------------------------------------------------AEVSR----GFV-------------------------------YHYLY---------------------K-----SRLLTQQK-----------------------------------------------------------------------WLFKPNSPGKSIVFDGRTGLNFDQPVTVGYPYILKLVHLVDDKIHAR-STGPYS--LVTQQPLGGRSK
>gi|125987643|sp|A0T0D7.1|RPOB_PHATC
NSYSNGVVSSVTANKI-----------------------VVND----KTGKR------------LTYKLQKYLRSNQQ-T---CINHRPIVWKGEQVKSGQILTDG-----PAITSSELSLGQNVLIGYMPWQG-YNFEDAILINERLVYDDVFTSIHIERYKIEI----------DRNS--DTL-ERTTKNIPNL-----------NPREIRHL--NDD----GIVTV----GTF------VRPGDILVGKVIS--NNTSEQLPE--SKLLRAIFGAKAK-GVKDNSYRMSDG--EY-GRVIETVTFNRR--------------------------------------------------------------------------------------------------------------------------TKLTY----K-----FEKIYVFIAQIRKIQVGDKIAGRHGNKGIISRILSRQDMPFLPDGTPLDILLNPLGVPSRMNVGQLYECLLGLAGDK----------------------------------------------------------------------LN-ARFKILPFDEMYG--------------------------------------------------------------------------------------LEISR----ILI-------------------------------NKKLR---------------------Q-----ASIAKNES-----------------------------------------------------------------------WLFNPYAPGKMVLIDGRTGKEFENPVTVGNAYMLKLIHLVDDKMHAR-ATGPYS--LITQQPLRGKAQ
>gi|500502363|ref|WP_011949769.1|
RARNEGKVEYVDGAKI-----------------------KIRN----NKGTLD------------TYSLKNFQRSNQD-T---VIHQKPIIKVGQDVAKGDLLVDG-----SSFKDGELALGKNLLVAFSTYKG-YNYEDAIVLNERLAKKDVLTSIHIEEQTIQF----------RTSK--AGA-DELTRDIPNV-----------SKYAIRHL--DEH----GIVLV----GSE------VIPGDVLVGRVSP--KGDDNPSRE--EKLLAAILGQRQL-NVKDTSLKVKNG--HN-GTVIGVEILSRE--------------------------------------------------------------------------------------------------------------------------NKDLLEDG-I-----DMIVKVSIAVKRKIRVGDKMSGRHGNKGVVSVILPEEDMPHLEDGTPIDVMLNPQGVPSRMNIGQVLEVHLGMAARS----------------------------------------------------------------------LG-CKFVTPVFDGV-------------------------------------------------------------------------------------------KK----EAI-------------------------------QDVIS---------------------EAG-LPL-------------------------------------------------------------------------------------SGKQTLIDPITGEKFDNPVSVGVMYMFKLNHMVDDKMYAR-SVGPYS--LITQQPLGGKSQ
>gi|14195189|sp|Q9PQV6.1|RPOB_UREPA
VAKNDGVVEFVDSQKI-----------------------IIRN----DNDKL------------DDYKLIKYRKSNQD-T---CNNQIPIVKVGQRVHKSETIGDG-----PAMQNGELALGRNILVGYTTWRG-YNFEDAIIISERLVDQDVFTSIHIDEHTIQC----------MKTK--NGD-EEITRDMPNV-----------SDTAKRFL--DNQ----GIVLV----GAE------VHEGDVLVGKTTP--RGNVETAPE--DRLLQTIFGDKSK-TVKDSSLKVKHG--QE-GIVAAVKRIKSSD------------------------------------------------------------------------------------------------------------------------ENGSELPDD-V-----IEIIKVYIVQKRKIQVGDKMAGRHGNKGIVSKVVPIQDMPFLKDGTPLDIMLNPLGVPSRMNIGQILELHLGYAAAEIGKKQLIQIAIDQLGYEKYISLFGINEIIAKKLYENISNLIKHKQAKQAKDIDLIDVTIILKELGLSYDDIG-IKISTPVFDGA-------------------------------------------------------------------------------------------NH----DDI-------------------------------VSIMN---------------------E-----ANIDI------------------------------------------------------------------------------ENNKGKQVLYDGRTGEPFDGLISVGLTYMLKLDHMVDDKIHSR-SVGPYS--KITQQPLGGKSQ
>gi|526005054|ref|WP_020835982.1|
VATADGIVKYVDSKKI-----------------------IIEQ-----KDGIK------------TYDLNDFSRSNNG-T---AITHLPIVKLGDKVKARDILADG-----PSMEKGELALGQNVVVAFTTWNG-YNYEDAVIVSERIVIDDRFTSIHIDEYTIER----------RQTK--QGP-EEVTRDIPNI-----------SEASKKYL--DED----GIVAI----GAE------VKVGDILVGKVTP--KSQTQLSPE--DKLLHAIFGEKSR-NVKDNSLRVPNG--GE-GIIKSIKRFSRA--------------------------------------------------------------------------------------------------------------------------DGHDLPAD-I-----LEIIKVYIVQKRKIQEGDKMAGRHGNKGVISKILPVEDMPHMEDGTPVDIMLNPQGVPSRMNIGQVLEIHLGMAAKK----------------------------------------------------------------------LG-IKVNTPVFEGV-------------------------------------------------------------------------------------------KE----QEL-------------------------------QDIMV---------------------EAG-MDN-------------------------------------------------------------------------------------YGKVTLIDGKTGEAFDKPISVGVMYMLKLSHMVDDKLHTR-NIGPYS--LITQQPLGGKAQ
>gi|3915861|sp|Q59191.2|RPOB_BORBU
KAKRSGEVILATSSKI-----------------------VVKPFEAENAKDLD------------EYHIVKYERTNQD-T---CFNQSVLVKEGQKVERGEIIADG-----PATRYGELALGNNLLLGVIPWNG-FNYEDAILISDRIVKEDLYTSIHIKEFSIEV----------RETK--LGP-EKVTGDIPNV-----------SEKILNKL--DEN----GIIRI----GTY------VKPGDILVGKVTP--KSEGDITPE--FRLLTSIFGEKAK-DVKNNSLKVPHG--TE-GTVIDVQRITKE--------------------------------------------------------------------------------------------------------------------------DVGNLSPG-V-----EEILKVYVAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPLGVPSRMNIGQLMESQLGLAGKY----------------------------------------------------------------------LG-ESYNVPVFESA-------------------------------------------------------------------------------------------TN----EQI-------------------------------QEKLK---------------------TAG-FNP-------------------------------------------------------------------------------------TSKEILYDGYTGEPFENEVMVGVIYMLKLHHLVDDKMHAR-STGPYS--LVSQQPLGGKAQ
>gi|41017590|sp|O25806.1|RPOBC_HELPY
KANRAGVVEKIDSKNI-----------------------YILG----ESKEEAY---------IDAYSLQKNLRTNQN-T---SFNQVPIVKVGDKVGAGQIIADG-----PSMDRGELALGKNVRVAFMPWNG-YNFEDAIVVSECITKDDIFTSTHIYEKEVDA----------RELK--HGV-EEFTADIPDV-----------KEEALAHL--DES----GIVKV----GTY------VSAGMILVGKTSP--KGEIKSTPE--ERLLRAIFGDKAG-HVVNKSLYCPPS--LE-GTVIDVKVFTKKGYEKDARVLSAYEEEKAKLDMEHFDRLTMLNREELLRVSSLLSQAILEEPFSHNGKDYK----EGDQIPKEEIASINRFTLASLVKKYSKEVQNHYEITKNNFLEQKKVLGEEHEEKLSILEKDDILPNG-V-----IKKVKLYIATKRKLKVGDKMAGRHGNKGIVSNIVPVADMPYTADGEPVDIVLNPLGVPSRMNIGQILEMHLGLVGKEFGKQIARMLEDKTKDFAKELRAKMLEIAN------------AINEKDPLTIHALENCSDEELLEYAKDWSKG-VKMAIPVFEGI-------------------------------------------------------------------------------------------SQ----EKF-------------------------------YKLFE---------------------L-----AKI---------------------------------------------------------------------------------AMDGKMDLYDGRTGEKMRERVNVGYMYMIKLHHLVDEKVHAR-STGPYS--LVTHQPVGGKAL
>gi|548824|sp|P29398.2|RPOB_THEMA
LAEHDGIVKEVDAARV-----------------------VVHRT--DENG--NLMYDDKGNPVVDEYRLLKFVRSNQD-T---MINQKPIVNEGDFVKKGDPIADG-----PATDMGELALGRNILVAFMPWEG-YNYEDAILVSQELLEEDVFTSIHIEVYETQA----------RETR--LGP-EEITADIPNV-----------SKELLKNL--DEN----GIIRV----GAYVVSDYGVGSQAILVGKVTP--KGEGDTTPE--EKIIRSVFGERGR-DVKDTSLRLPHG--VE-GRVIRVDVYDQN--------------------------------------------------------------------------------------------------------------------------DIAELGAG-V-----LKLVRVYVASRKTLDIGDKLAGRHGNKGVVSNILPKEDMPFLPDGTPVQMVLNPLGIPSRMNVGQILETHLGWLAKL----------------------------------------------------------------------TG-KWFATPVFEGA-------------------------------------------------------------------------------------------KE----DEI-------------------------------LRPLY---------------------EER-KKRGLHLGD--------------------------------------------------------------------------DENNPNGKVVLRDGRTGEPFDNPVVVGYMYMLKLIHIAKEKIHAR-STGPYS--LIHQQPLGGKSH
>gi|88909135|sp|Q30X05.1|RPOB_DESAG
IAEADGVVRYADADRI-----------------------VVSY----EGDLYPRTG------GVRSYDLQKYHKSNQS-S---CFGQKPLVSRGQVIRKGDVLADG-----PGIEDGELALGKNLVVAFMPWCG-YNFEDSILISERCVKEDVFTSVHIEEFEVVA----------RDTK--LGP-EEITRDIPNV-----------GEDMLRNL--DGS----GIIRI----GAN------VKPDDILVGKITP--KGETQLTPE--EKLLRAIFGEKAR-DVKNTSLKVPPG--IE-GTVIDVKLFNRRSGEKDERTRNIEDYELARLDQKEKDHIRALTETTREKLAPVVVGKQLAYGLAGQKKGEV---IAEAGQTLTAEMLEGLPVKKLSGLFKSKDTNEAVQQALESYDRQIEFINAMYESKREKVTEGDDLPPG-V-----IKMAKVHIAVKRKLNVGDKMAGRHGNKGVVSCILPQEDMPFFADGRPVDIVLNPLGVPSRMNIGQIMETHLGWAAKEMGRKLALMLEHGQDLASVREQVKTVF-------------------ASDAISSEVDNMDDETFVRSVRRLRDG-IVTKTPVFDGA-------------------------------------------------------------------------------------------TE----EQI-------------------------------WSWME---------------------Q-----AGL---------------------------------------------------------------------------------ANDGKTELYDGRTGVRFHNRVTTGVMYILKLHHLVDEKIHAR-STGPYS--LVTQQPLGGKAQ
>gi|226699410|sp|B3E7S8.1|RPOB_GEOLS
IARHNGVVDAVDAGRI-----------------------VIKID--EEEYDETGTG-------VDIYNLVKFSRSNQN-T---CINQKPVVKVGDKVKRGDVIADG-----PSTDMGELALGQNIIVAFMPWGG-YNFEDSILVSERLTKDDRYTSIHIEEFECVA----------RDTK--LGK-EEITADIPNL-----------GEEALKDL--DES----GIIRI----GAE------VKPGDILVGKITP--KGETQLSPE--EKLLRAIFGEKAG-DVRDTSLTIPPG--VE-GTVIGAKVFSRKGNDKDARTELIEKIEEEKLRKDEQDEVRIIRDSARGKLKRLLVGKTAGAKIEDRHGVTV---LAKGKKITDELLESLTMDRWATISVSDGTDVEEKVAEVLSKLNEQVELIRGVFDDKVQKLRRGDDLPPGV-----IKMVKVYVAIKRKLQVGDKMAGRHGNKGVVSRILPEEDMPYMDDGRPVEIVLNPLGVPSRMNVGQILETHLGWAAKGLGWKIQKMLEEHTSEENLKKFIRETY-------------------DNADFNKILDTMDREELLLVARRLSRG-VPMASPVFEGA-------------------------------------------------------------------------------------------GE----AKI-------------------------------KELLT---------------------RAG-FAT-------------------------------------------------------------------------------------NGQVTLFDGRTGEPFKHKVTVGIMYVLKLHHLVDDKIHAR-SIGPYS--LVTQQPLGGKAQ
>gi|226699395|sp|A8ZV51.1|RPOB_DESOH
VARRPGEVVYVDSGRI-----------------------VVRHD--TDDKDPEAKP-------VTVYNLSKFIRSNQN-T---CFNHRPIVKKGQRVAPGDVLADG-----PATEKGELALGKNVTVAFMPWGG-YNFEDSILVGETLVRDGVFTSIHIEEFEVVA----------RDTK--LGK-EEITCDIPNV-----------GEESLVDL--DES----GIVRL----GAE------VKPGDVLVGKITP--KGETQLSPE--EKLLRAIFGEKGG-NVKDTSLRVPPG--VS-GTVIDAKVFTRRGVEKDTRTRMIEEEEIRVLEKNRDDEIAVIEEVTRERLKALLTGQKCDTPVKKGKKTI-----LAKGDKITAALFDEVPTSQFEKLAVTSDSVTEQAHRVFEWYRTQVDACREEFEARISRYGAGEELPPGV-----IKMVKVYVAMKRVLSTGDKMAGRHGNKGVVSRILPQEDLPYFEDGTTVDMVLNPLGVPSRMNVGQILEIHLGRAARVLGDQISTMLEEKKYKDLKKKLSAVF--------------------NKEIPAAEIEAMSSARLCEFASEYKDG-VHMETPVFDGA-------------------------------------------------------------------------------------------KE----AEI-------------------------------KALLK---------------------EGG-ADE-------------------------------------------------------------------------------------TGQAILYDGRTGQPFDERITVGTMYMLKLHHLVDDKLHAR-SIGPYS--LVTQQPLGGKAQ
>gi|109914401|sp|Q2LQ87.1|RPOB_SYNAS
VAKRSGIVESVDASRI-----------------------VIKC----ESAEKTDRD-----TGVDIYTLIKYQRSNQD-T---CFNQKAIVNKGQRVRKGDIIADG-----PATDNGELALGHNVMVAFMSWGG-YNYEDSILVSERIVKEDIYTSIHIEEFETMA----------RDTK--LGK-EDITRDIPNV-----------GEEALRNL--DDS----GIVRM----GVS------VKSGDILVGKITP--KGETQLSSE--EKLLRAIFGEKAS-DVRDTSLRVPPG--VE-GTVIDAKVFTRKGAEKDHRSQYIEDEAIAMLQKDREDEIRIITEAVKKEVGTLLQGKQSGAKIVDPKRKKIY-LKKGDIITPEILSEIPLHLWKEITVADDEETERAVGQMMANLYDKIEVVEAYFNEKTEKLKASDELPPG-V-----IKMVKVYIAIKRKLQAGDKMAGRHGNKGVLSRILPEEDMPYFKDGRPVDIVLNPLGVPSRMNVGQILETHLGWAAKGLGEKLNDMLDSYQKGNQLRDELKGIY-------------------QSREFEKFVDGATEEETYQFVRKLRRG-IAVSSPVFDGA-------------------------------------------------------------------------------------------TE----SDI-------------------------------RNMLK---------------------L-----ANL---------------------------------------------------------------------------------PSTGQAILYDGRTGEPFDQEITVGMIYMLKLHHLVDNKIHAR-SIGPYS--LVTQQPLGGKAQ
>gi|296925344|gb|ADH86154.1|
LAGGDGVVEEVDANRI-----------------------VVRYD--EP----GTDGFT---TGIGIYRLEKYKKSNQN-T---CFTQRPLVEPGVRVKKGDILADG-----PACDHGELALAKNVTVAFMPWRG-YNYEDSILVNERLLKNDTYTSFHIEVFETVA----------RDTK--LGK-EEVTRDIPNV-----------SEEALRNL--DES----GIVRV----GAE------IKAGDILVGKITP--KGETQLSPE--EKLLRAIFGEKAG-DVKDTSLRVPPG--VE-GVVVDAKVFSRKGVEKDERSLAIEEAEIKALERDLEDELNLLARSVRNGLADLLVGKKVKNAVKNRKGEELL--AKDKKITREVLEKLSPSEIKKLDYAGRDSLEGEINLLFDRHDSQVKMVRSRYEARIARLQKGDDLPPG-V-----IRMVKVYLAIKRKLAVGDKMAGRHGNKGVVSRILPEEDMPYFADGTAVDIVLNPLGVPSRMNVGQLLEIHLGLAAKKLGEQVQRLAQTRDLAAVKKKLAAVY--------------------SKEEYEQLLADLTDDDLLELASRMGKG-LHMATPVFDGA-------------------------------------------------------------------------------------------QE----EEI-------------------------------RRLLV---------------------EAG-LDE-------------------------------------------------------------------------------------IGQLDLYDGLTGEKFDNQVTVGSMYMLKLHHLVDDKIHAR-STGPYS--LVTQQPLGGKAQ
>gi|88909625|sp|Q4FLL2.1|RPOB_PELUB
VASRDGTVDKIDGKRI-----------------------VIKA----TEETDFTKS------GVDIYNLQKFKRSNQN-T---CINQKPLVRVGDKVKSGDIIADG-----PSTKLGELALGKNVTVAFMPWQG-YNFEDSILISERCVTDDVFTSVHIVEYEVMA----------RDTK--LGE-EEITRDIPNV-----------NEEALKNL--DES----GIVYI----GAE------VKAGDILVGKVTP--KGDSASGPE--EKLLRSIFGEKAI-DVTDTSLKMSRG--SS-GTVVDVRVFNRHGIEKDERSITIERAEIDTVQQDKIVEEEILERSIKQRANQILSGASLTKKIKDLDE---------GTKLDLEIINKININDVFKITVGNVNDEASIAQLKDQYNQAKQDIQERFEDKVLKIRSGDDLLPS-V-----MKMVKVFVAIKRRLRPGDKMSGRHGNKGVVSKIVPVEDMPYREDGRPVDIVLNPLGVPSRMNVGQILETHLGWACKEFGEEVKRLVNENNKKFEKTEKISSFLKS---------------VYGKEVFDGGIEKLNKTEFSDLCENLQNG-IAISTPVFDGA-------------------------------------------------------------------------------------------KE----KDV-------------------------------SEMLE---------------------L-----AKL---------------------------------------------------------------------------------PTSGQTNLWDGRTGEMFDRPVTVGIIYMLKLHHLVEDKIHAR-STGPYS--LVTQQPLGGKAQ
>gi|41017765|sp|Q8RHI6.1|RPOB_FUSNN
TTKVSGKVTYVDGKKI-----------------------IIED----KDKKEH------------IYRLLNYERSNQS-M---CLHQTPLVDLGDKVKAGDIIADG-----PATKLGDLSLGRNILMGFMPWEG-YNYEDAILISDRLRKDDVFTSIHIEEYEIDA----------RTTK--LGD-EEITREIPNV-----------SESALRNL--DEN----GVIMI----GSE------VGPGDILVGKTAP--KGETEPPAE--EKLLRAIFGEKAR-DVRDTSLTMPHG--SK-GVVVDILELSRE--------------------------------------------------------------------------------------------------------------------------NGDELKAG-V-----NKSIRVLVAEKRKITVGDKMSGRHGNKGVVSRVLPAEDMPFLEDGTHLDVVLNPLGVPSRMNIGQVLEVHLGMAMRTL--------------------------------------------------------------------NGG-TCIATPVFDGA-------------------------------------------------------------------------------------------TE----EQV-------------------------------KDYLE---------------------K-----QGY---------------------------------------------------------------------------------PRTGKVTLYDGRTGEKFDNKVTVGIMYMLKLHHLVEDKMHAR-AIGPYS--LVTQQPLGGKAQ
>gi|158512586|sp|A1B015.1|RPOB_PARDP
MARRGGIIDQVDAQRI-----------------------VIRA----TEDLGAGDA------GVDIYRLRKFKRSNQS-S---TINQRPLVKVGDKVVKGQVVADG-----PSTDQGELAIGRNVVVAFMPWNG-YNYEDSILISERIHRDDVFTSIHIDEYEVAA----------RDTK--LGP-EEITRDIPNV-----------GEEALRNL--DEA----GIVYI----GAE------VGPGDILVGKITP--KGESPMTPE--EKLLRAIFGEKAS-DVRDTSLRLPPG--AY-GTIVEVRVFNRHGVDKDERALQIEREEVERLARDRDDELAILERNIYARLKSLIMGKEVVKGPKGIRA---------GAVVDEDLLGQLSRGQWWQLAVADEDTAKEVEALNQQFDAQKRALDNRFDDKVEKVRQGDDLPPG-V-----MKMVKVFVAVKRKLQAGDKMAGRHGNKGVVSKVVPIEDMPFLSDGTPVDLVFNPLGVPSRMNVGQILETHMGWASRGLGIKIDEALQDYRRNGDMTPVREAMQN----------------GYGDDFYAETFEGMEDETLLEHADAVRGG-VPISTPVFDGA-------------------------------------------------------------------------------------------KE----ADI-------------------------------NDALR---------------------R-----AGF---------------------------------------------------------------------------------DTSGQSIVFDGRTGEQFARPVTVGMKYVLKLHHLVDDKMHAR-STGPYS--LVTQQPLGGKAQ
>gi|158564160|sp|Q1J0P6.1|RPOB_DEIGD
ISDVTGRVTYVDARAI-----------------------QVTL----TEDAPQIGLVK---GNVRTFELVRFTRSNQG-T---NLDQHPIVSVGDEVVPGQVIADG-----PASDQGRLALGQNITIAIMPFDG-FNFEDAICISEGLVRKDFYTSVHIEKDEIEA----------RDTK--LGP-EKITRDIPGL-----------SEAALRDL--DED----GIVRV----GAE------VKPGDILVGKTSF--KGESEPTPE--ERLLRSIFGEKAR-EVKDTSLRVQSG--QG-GIVVKTVRFRRG-------------------------------------------------------------------------------------------------------------------------DEGVDLKPG-V-----REMVRVYVAQKRQLQVGDKVANRHGNKGVVSKILPPEDMPYLEDGTPVDLVFNPLGVPSRMNLGQILETHLGEVARL----------------------------------------------------------------------TG-QKFVTPVFDSA-------------------------------------------------------------------------------------------TE----EAI-------------------------------KEMLEVAAAERLQRRKDEGFELDKREQEVLDRAGKLGVISPPNG---------------------------------------------------------------DYAAAQMQLARTGKSVLYDGRTGEPISGPVVVGTMYVMKLYHMVEDKLHAR-STGPYS--LITQQPLGGKAQ
>gi|489156006|ref|WP_003065687.1|
TAKRGGIVDYVDATRI-----------------------VIRVN--DDEAVAGEVG-------VDIYNLIKYQRSNQN-T---NIHQRPIVSRGDKLAKGDVLADG-----ASTDLGEIAIGQNMLIAFMPWNG-YNYEDSVMINERIVADDRYTSIHIEELVVMA----------RDTK--LGA-EEITRDIPNL-----------SEQQLNRL--DES----GIIYV----GAE------VQPGDVLVGKVTP--KGETTLTPE--EKLLRAIFGEKAS-DVKDTSLRVDQG--SQ-GTVIDVQVFTREGIQRDKRAQQIIDDELKRFRLDLNDQLRIVEADAFDRIEKLLTGRVANGGPQKLSK---------GAKIDKAYLDGVEKFHWFDIRPAEDDVAAQLESIKNSIEQQRHTFDLAFEEKRKKLTQGDELPAG-V-----LKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKITPVEDMPFLADGTTADIVLNPLGVPSRMNIGQVLEVHLGWAGKGLGQRIGDMLQKEARAAEVRAFLEEIY-------------------NRSGRKEELSQLDDGEVMSMAKELTTG-VPFATPVFDGA-------------------------------------------------------------------------------------------SE----AEI-------------------------------KDMLK---------------------LAY-PDDIAAAK---------------------------------------------------------------------------GLTETRTQAYLYDGRTGERFERPTTVGYMHYLKLHHLVDDKMHAR-STGPYS--LVTQQPLGGKAQ
>gi|158512581|sp|A1AX75.1|RPOB_RUTMC
TAKHSGVVEAVDASRI-----------------------VIRV----DSKKTKASE-----LGVDIYNLTKYSRSNQN-T---CINQKPLVKTGDKISAADVLADG-----PSTDMGELALGQNMKIAFMPWNG-YNFEDSILISEKVIQEDRYTTIHIEELTAYS----------RDTK--LGP-EEITADIPNV-----------SELALAKL--DEV----GVVYV----GAR------VKGGDILVGKVTP--KSETVLSPE--EKLLRAIFGEKAN-NVKDSSLRVGAS--KS-GVVIDVQIFTRDRVEKDDRALSIDAERLERIKKDIDDEFGIIDGDIFRRVRLKLSGNMLSKVAGDIKA---------GEKLSAKLMKKLDNKDISKLKVEDAAVNKEVAALIKQAKAKQIEFKKFFEEEKAKINEGAELPPG-V-----MKMVKVYVATSKTLQVGDKMAGRHGNKGVISRVSPVEDMPYLVDGSTIDVVLNPLGVPSRMNVGQVLEVHLGYAAKGLGYKITAMLDEKRTDMVKQIRDFLDEV-----------------YNSYGKQENLASFSDEEIIELASNLREG-VPMATPVFDGI-------------------------------------------------------------------------------------------KE----KDI-------------------------------KSLLK---------------------L-----ADL---------------------------------------------------------------------------------PESGQEQLYDGRTGEPFDRHVTVGYMHMLKLNHLVNDKMHAR-STGPYS--LVTQQPLSGKAQ
>gi|81398906|sp|Q6LLW2.1|RPOB_PHOPR
VAKRGGQVQSVDASRI-----------------------VVKV----NEDELVPGE-----AGIDIYNLTKYTRSNQN-T---CINQRPTVMPGEPVARGDVLADG-----PSTDLGELALGQNIRIAFMPWNG-YNFEDSILVSERVVQQDRLTTIHIQELSCVA----------RDTK--LGS-EEITADIPNV-----------GEAALSKL--DES----GIVYI----GAE------VKGGDILVGKVTP--KGETQLTPE--EKLLRAIFGEKAS-DVKDSSLRVPNS--VS-GTIIDVQVFTRDGVEKDKRALEIEEMQLKEAKKDITEEFQILEGGLLARVRTLLLSIGYSEE----------------------KIASMDRERLFALTLDDESLQNQLEQLAEQYDELKAEFDKKFETKRRKITQGDDLAPG-V-----LKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKICPVEDMPYDEKGQTVEIVLNPLGVPSRMNIGQILETHMGLAAKGIGDKLNEMLKQQQELHKFRNFLQKVYD-----------------LGDTRQDVDIAALSDDQVHTLVQNLRDG-LPIATPVFDGA-------------------------------------------------------------------------------------------PE----SSI-------------------------------KELLK---------------------L-----GDL---------------------------------------------------------------------------------PESGQLKMFDGRTGDMFERPVTVGYMYMLKLNHLVDDKMHAR-STGSYS--LVTQQPLGGKAQ
>gi|81598038|sp|Q5NID2.1|RPOB_FRATT
IARNAGEVAEVDSNRI-----------------------VIKVD--TEKSQTSNL--------VDIYSLTKFKRSNKN-T---CINQRPIVNVGDKVEAGDILADG-----FATDFGELSLGHNLMVAFMPWNG-YNFEDSILLSERIVKDDKYTSIHIEEFTCVA----------RDTK--LGP-EEITADIPNV-----------SESSLAKL--DES----GIVHI----GAN------VEAGDILVAKITP--KAEQQLTPE--ERLLRAIFNEKAS-NVADSSLRMPSG--TS-GTVINVQVFENDKGGKSKRALKIEKELIDKARKDFDEEFAVIESVVKSSIEQEVVGAKIQKAKGLKKG----------AILTKEFLATLPFSKWLEISFEDEKLEEKVQNAREYYEEAKIAIDAKFEAKKKSITQSNELSPG-V-----LKTVKVFVAIKKRIQPGDKMAGRHGNKGVVSRVLPVEDMPYMEDGTPVDVCLNPLGIPSRMNIGQILEAHLGLASYGLGKKIEKTLEKTRKAAELRKTLEEVY------------------NSVGDKKVNLEALNDEEILTLCDNLKGG-VPIATPVFDGA-------------------------------------------------------------------------------------------KE----EDI-------------------------------KSLLK---------------------IGG-FAT-------------------------------------------------------------------------------------NGQMKLFDGRTGKPFDRHVTVGYMYMLKLDHLVDDKMHAR-STGSYS--LVTQQPLGGKAQ
>gi|158512330|sp|A0L5W6.1|RPOB_MAGMM
TARRTGVVDEVDAARI-----------------------VVKA----DEEPGSTEP------GVDIYNLTKFSRSNQN-T---CINQVPLVKNGERVTAGDIIADG-----PSTQIGELALGRNVLVAFMPWNG-YNFEDSILISERLVAEDVFTSIHIDEFEVMA----------RDTK--LGA-EEITRDMPNV-----------GEDALRNL--DES----GIIYV----GAE------VKPGDILVGKVTP--KGETQLTPE--EKLLRAIFGEKAS-DVRDTSLRLPPG--VA-GTVVDVRVFSRRGLEKDDRAKLIDQDEIALLRKDMAAERRIIERDADERIRNLMNGKPVRSAPGLQPG----------DHISQSWLDKSPSSHLRDVVLDDDAITQQIEGIRHHVEKAADRLKKRFESKVEKLERGDDLPPG-V-----LKMVKVYIAVKRKLQPGDKMAGRHGNKGVISKINPLEDMPYMANGTPVDIVLNPLGVPSRMNVGQILETHLGWAARGMGFKIEEALKQHRKGVADVLRRQFEEI-----------------YDNTRESAEIAALSDDQLVDMAKNLQYG-VPTATPVFDGA-------------------------------------------------------------------------------------------IE----SDI-------------------------------SSWLN---------------------K-----AGL---------------------------------------------------------------------------------PTSGQIQLIDGRTGEPFDRHVTVGYIYMLKLHHLVDDKIHAR-SIGPYS--LVTQQPLGGKAQ
>gi|109904440|sp|Q2GD90.1|RPOB_NEOSM
VAKRAGVVQYIDARNI-----------------------VVAS----ESKDDFW---------IDSYTLCKFRKSNHN-T---CIHQRCVVHQGQRVKKGDILADG-----PAIQKGELALGRNLVVAFLSWRG-YNFEDSVVISSNVVRDDLFTSVHLEGFECVV----------RDTR--LGP-EEITRDVSGV-----------AEEFLHCL--DEF----GIACV----GAN------VEAGDVLVGKVTP--KSSSPVTPE--EKLLRAIFGEKAI-DVKDSSLYLPPG--VS-GCVVDVKVLQRRGIEKVGRALLIEKQAIDAEKTRRDHELAVLTNYIYSLLKEMLVGKVALSTLAPIS------------KGDLITEEALEKIDRENWWKISVDGISSIKLLRQRFVDRFDEINKTYEENFEKIRGDDDLAQG-V-----LMVVKVFVAVKHTLQPGDKMSGRHGNKGVISRIVPAEDMPYLADGTPVDIILNPLGVPSRMNVGQILETHLGWAAYNLGKKISKLLDEGNYSEVKSLVLEIYK-------------------NDRKMMARLNEMTDAEIVEYSRSLRGG-VPVAASVFEGP-------------------------------------------------------------------------------------------KT----DEI-------------------------------ERLLV---------------------L-----AGK---------------------------------------------------------------------------------DPSGQEVLYDGVTGEKFDRKVTVGCKYMLKLHHLVNDKIHAR-SIGSYS--LITQQPLGGKSH
>gi|97537056|sp|Q8KWX2.2|RPOB_EHRCR
LAKRGGIVHRVDGLYI-----------------------VIRAFD-QEKNEYLGV---------DIYNLRKFQRSNHN-T---CINQRPLVKPGDYVKANDVIADG-----SAIDQGELALGKNVLVAFMSWQG-YNFEDSIVISSEVVKKDVFTSIHIEEFECVV----------RDTT--LGP-EKIMRSVPDI-----------NEDSLSHL--DDV----GIVNV----GAE------VSAGDILVGKVTP--RP--PVSLPPETKLLVTIFGEKVF-DCVDSSLYLPLD--VE-GTVVDVHVFVRRGVEENDRSLLIKQNEINGFIKERDYEIDVVSEYFYDELKRVLVSSGVQYNNQN----------------IDDYLASIPKKEWWDINLSDEAMLLQVKDLKEKFDSMIQNAHSKFDQKIDKLNYGYDLPQG-V-----LCIVKVFVAVKHNLQPGDKMAGRHGNKGVISRIVPVEDMPYLEDGTPVDIILNSLGVPSRMNVGQILETHLGWASVNLGKKIGHILDNLDELTVSHLRNFLYQV-----------------YDGQDLKDNIQSMSDEDLLVFAERLRDG-VPMAAPVFEGP-------------------------------------------------------------------------------------------KD----SQI-------------------------------SNLLR---------------------LAD-LDV-------------------------------------------------------------------------------------SGQVDLYDGRIGEKFDRKVTVGYIYMLKLHHLVDDKIHAR-SVGPYG--LVTQQPLGGKSH
>gi|829191384|ref|XP_001030557.2|
LPSQIPFLNYNQSPRN-----------------------MYQCQ--MAKQTMG------------TSMHNFPYRFDNR-IYRLLNGQIPMVKGM-DPESYG--------------LSDYPSGTNAIVAVISYTG-YDMEDAMILNKSSYERGFGHGCVYKNYSYDVAE-------LNKEK--NSKFKMLNEVKNID-----------KSQIAEGL--EGD----GIPAI----GSV------IKKGTAVFQIY----------------------DTQKN----AMKTFYHKDS--EL-GRLDGIALV--------------------------------------------------------------------------------------------------------------------------------HDEKT-K-----EPRVEYRIRIPRNPIIGDKFSSRHGQKGVLSVLWPHIDMPFTESGITPDVIINPHAFPSRMTIGMLIESMAGKSGAL----------------------------------------------------------------------NG-NILETQPFQNYQ-----------------------------------------------------------------------------------------DDDI--VNYF-------------------------------GKQLQ---------------------SHG-YNY-------------------------------------------------------------------------------------YGNEVMYSGTYGCMMKVDIYMGIVYYQRLRHMVSDKAQAR-STGPVD--MLTQQPIKGRKR